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アセンブル , シーケンス , Assemble , Sequence , Physcomitrella patens , Spreading earthmoss , ヒメツリガネゴケ

Physcomitrella patens

Genome Assembly ID:t3218.G001

Sequence Name:Phypa V3.3

Details of the Assembled Genome Sequences

Assembly Name Phypa V3.3 Biological Sample strain Gransden 2004
Number of Sequences 378 Number of Chromosomes n = x = 27
Total Length (bp) 473,226,588 N50 Length (bp) 17,435,539
Number of Genes 87,533 Number of Genes Source File Ppatens_318_v3.3.protein.fa
Number of Genes Annotated by Hayai-annotation 87,533 Hayai-Annotation Version zen_v2.0
Sequencing Method Sanger Read Depth 18.49x
Assembly Method Arachne v. 3 Estimated Genome Size (Mb) 510
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Stefan A. Rensing (University of Marburg) Data Source Phytozome
DOI/PMID 10.1111/tpj.13801 Data Source URL https://phytozome.jgi.doe.gov/pz/portal.html
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:85.8%[S:73.7%,D:12.1%],F:2.3%,M:11.9%,n:1614 BUSCO Gene (pep/cds) C:88.7%[S:1.1%,D:87.6%],F:1.4%,M:9.9%,n:1614

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