Sequence Name:Mpolymorpha_320_v3.0
Assembly Name | Mpolymorpha_320_v3.0 | Biological Sample | subsp. ruderalis, A single clonal female |
Number of Sequences | 2,957 | Number of Chromosomes | n = x = 9 |
Total Length (bp) | 225,761,139 | N50 Length (bp) | 1,366,373 |
Number of Genes | 24,674 | Number of Genes Source File | Mpolymorpha_320_v3.1.protein.fa |
Number of Genes Annotated by Hayai-annotation | 24,674 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Illumina, ABI | Read Depth | 26.74x |
Assembly Method | ARACHNE_modified v. 200721016 | Estimated Genome Size (Mb) | 280 |
Sequencing Method Comments | NA | Comments | A single clonal female derived from backcross 4 between a male Takaragaike-1 (Tak-1) line and a femaleTakaragaike-2 (Tak-2) line (GenBank BioSample: SAMN02199054) |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | John L.Bowman (Monash University), Takayuki Kohchi (Kyoto University), Katsuyuki Yamato (Kindai University) | Data Source | Phytozome |
DOI/PMID | 10.1016/j.cell.2017.09.030 | Data Source URL | https://phytozome.jgi.doe.gov/pz/portal.html |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:79.6%[S:78.2%,D:1.4%],F:5.5%,M:14.9%,n:1614 | BUSCO Gene (pep/cds) | C:87.4%[S:68.8%,D:18.6%],F:1.2%,M:11.4%,n:1614 |