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アセンブル , シーケンス , Assemble , Sequence , Chlamydomonas reinhardtii , Chlamydomonas, Green algae , クラミドモナス, コナミドリムシ, 緑藻

Chlamydomonas reinhardtii

Genome Assembly ID:t3055.G001

Sequence Name:Chlamydomonas_reinhardtii_v5.6

Details of the Assembled Genome Sequences

Assembly Name Chlamydomonas_reinhardtii_v5.6 Biological Sample strain CC-503 cw92 mt+
Number of Sequences 54 Number of Chromosomes 1n = x = 17
Total Length (bp) 111,100,715 N50 Length (bp) 7,783,580
Number of Genes 19,526 Number of Genes Source File Creinhardtii_281_v5.6.protein.fa
Number of Genes Annotated by Hayai-annotation 19,526 Hayai-Annotation Version zen_v2.0
Sequencing Method ABI 3739 Read Depth 11.12x
Assembly Method ARACHNE v. 20071016_modified Estimated Genome Size (Mb) 121
Sequencing Method Comments NA Comments A cell wall-deficient mutant isolated from strain 137c
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Daniel S. Rokhsar (U.S. Department of Energy (DOE) Joint Genome Institute (JGI)), Arthur R. Grossman (Carnegie Institution) Data Source Phytozome
DOI/PMID 10.1126/science.1143609 Data Source URL https://phytozome.jgi.doe.gov/pz/portal.html
BUSCO Version 5.1.0 BUSCO Dataset chlorophyta_odb10
BUSCO Genome C:97.1%[S:96.8%,D:0.3%],F:1.4%,M:1.5%,n:1519 BUSCO Gene (pep/cds) C:99.0%[S:92.9%,D:6.1%],F:0.3%,M:0.7%,n:1519

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