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アセンブル , シーケンス , Assemble , Sequence , Sesamum alatum , Winged-seed sesame, Wild sesame , 野生ゴマ, ゴマ野生種 (alatum種)

Sesamum alatum

Genome Assembly ID:t300844.G002

Sequence Name:Sala_v1.0

Details of the Assembled Genome Sequences

Assembly Name Sala_v1.0 Biological Sample Toyama Ala1
Number of Sequences 29 Number of Chromosomes 2n = 2x = 26
Total Length (bp) 534,647,785 N50 Length (bp) 39,759,466
Number of Genes 24,854 Number of Genes Source File S.alatum_hic_annotation_v1.0_protein.fa
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina PE, PacBio CLR, Hi-C Read Depth 325x
Assembly Method Canu v2.1.1; Arrow (gcpp 1.0.0-SL-release-8.0.0); Pilon v1.24; YaHS v1.2a.1 Estimated Genome Size (Mb) 537
Sequencing Method Comments Comments
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Masayuki Yamamoto (Toyama University) Data Source Plant GARDEN
DOI/PMID Data Source URL https://plantgarden.jp/
BUSCO Version 5.4.3 BUSCO Dataset eudicots_odb10
BUSCO Genome C:98.4%[S:93.1%,D:5.3%],F:0.5%,M:1.1%,n:2326 BUSCO Gene (pep/cds) NA

Search Genes

Gene data has not been registered.

Cut-Out Genome Sequences

Genome sequence data has not been registered.