Sequence Name:snowberry
Assembly Name | snowberry | Biological Sample | wild accession |
Number of Sequences | 3,518 | Number of Chromosomes | 2n = 2x = 12-14 |
Total Length (bp) | 557,689,917 | N50 Length (bp) | 2,354,703 |
Number of Genes | 43,217 | Number of Genes Source File | snowberry_final_asm.hc_models.pep.fasta.gz |
Number of Genes Annotated by Hayai-annotation | 0 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Illumina, 10x Genomics | Read Depth | 86x(paired-end), 30x(mate-pair), 70x(10x genomics raw), 48x(10x genomics effective coverage) |
Assembly Method | NextClip (v1.3.1) for ALLPATHS-LG, Supernova (v2.0.0) for 10x genomics | Estimated Genome Size (Mb) | 567(flow cytometry), from480 to 537(k-mer) |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | C Robin Buell (Michigan State University) | Data Source | DRYAD |
DOI/PMID | 10.1093/dnares/dsaa013 | Data Source URL | https://datadryad.org |
BUSCO Version | BUSCO Dataset | ||
BUSCO Genome | BUSCO Gene (pep/cds) |