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アセンブル , シーケンス , Assemble , Sequence , Amaranthus hypochondriacus , Grain amaranth , アマランサス

Amaranthus hypochondriacus

Genome Assembly ID:t28502.G001

Sequence Name:Ahypochondriacus_459_v2.0

Details of the Assembled Genome Sequences

Assembly Name Ahypochondriacus_459_v2.0 Biological Sample cv. Plainsman
Number of Sequences 908 Number of Chromosomes 2n = 2x = 32
Total Length (bp) 403,889,442 N50 Length (bp) 24,364,990
Number of Genes 23,879 Number of Genes Source File Ahypochondriacus_459_v2.1.protein.fa
Number of Genes Annotated by Hayai-annotation 23,879 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBio, Hi-C Read Depth NA
Assembly Method ALLPATHS-LG, ABySS Estimated Genome Size (Mb) 466
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author P. J. Maughan (Brigham Young University) Data Source Phytozome
DOI/PMID 10.1186/s12915-017-0412-4 Data Source URL https://phytozome.jgi.doe.gov/pz/portal.html
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:97.0%[S:94.6%,D:2.4%],F:1.3%,M:1.7%,n:1614 BUSCO Gene (pep/cds) C:80.7%[S:78.5%,D:2.2%],F:8.8%,M:10.5%,n:1614

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