Sequence Name:C.sinensis_v2.0_HZAU_csi
Assembly Name | C.sinensis_v2.0_HZAU_csi | Biological Sample | cv. Valencia |
Number of Sequences | 10 | Number of Chromosomes | 2n = 2x = 18 |
Total Length (bp) | 327,944,670 | N50 Length (bp) | 30,837,053 |
Number of Genes | 44,275 | Number of Genes Source File | csi.peptide.fa |
Number of Genes Annotated by Hayai-annotation | 44,275 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Illumina | Read Depth | 214x |
Assembly Method | SOAPdenovo v. 2011-04 | Estimated Genome Size (Mb) | 367 |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Xiu-Xin Deng (Huazhong Agricultural University), Yijun Ruan (ditto) | Data Source | Citrus Pan-genome to Breeding Database (CPBD) |
DOI/PMID | 10.1038/ng.2472 | Data Source URL | http://citrus.hzau.edu.cn/index.php |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:98.3%[S:97.2%,D:1.1%],F:1.1%,M:0.6%,n:1614 | BUSCO Gene (pep/cds) | C:95.6%[S:61.6%,D:34.0%],F:2.8%,M:1.6%,n:1614 |