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アセンブル , シーケンス , Assemble , Sequence , Citrus sinensis , Orange , オレンジ

Citrus sinensis

Genome Assembly ID:t2711.G001

Sequence Name:C.sinensis_v2.0_HZAU_csi

Details of the Assembled Genome Sequences

Assembly Name C.sinensis_v2.0_HZAU_csi Biological Sample cv. Valencia
Number of Sequences 10 Number of Chromosomes 2n = 2x = 18
Total Length (bp) 327,944,670 N50 Length (bp) 30,837,053
Number of Genes 44,275 Number of Genes Source File csi.peptide.fa
Number of Genes Annotated by Hayai-annotation 44,275 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina Read Depth 214x
Assembly Method SOAPdenovo v. 2011-04 Estimated Genome Size (Mb) 367
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Xiu-Xin Deng (Huazhong Agricultural University), Yijun Ruan (ditto) Data Source Citrus Pan-genome to Breeding Database (CPBD)
DOI/PMID 10.1038/ng.2472 Data Source URL http://citrus.hzau.edu.cn/index.php
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.3%[S:97.2%,D:1.1%],F:1.1%,M:0.6%,n:1614 BUSCO Gene (pep/cds) C:95.6%[S:61.6%,D:34.0%],F:2.8%,M:1.6%,n:1614

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