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アセンブル , シーケンス , Assemble , Sequence , Cuscuta chinensis , Chinese dodder , ハマネナシカズラ

Cuscuta chinensis

Genome Assembly ID:t267557.G001

Sequence Name:Cchi_Kai_v1.0

Details of the Assembled Genome Sequences

Assembly Name Cchi_Kai_v1.0 Biological Sample Kaifu
Number of Sequences 1,237 Number of Chromosomes 2n = 4x = 60
Total Length (bp) 1,509,462,550 N50 Length (bp) 49,041,297
Number of Genes 37,087 Number of Genes Source File Cuscuta_chinensis_Kaifu.pep.v1.fa
Number of Genes Annotated by Hayai-annotation 37,087 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina Hi-C Read Depth NA
Assembly Method Hifiasm Estimated Genome Size (Mb) 1,220
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Tenta Segawa (Suntory Global Innovation Center Ltd.) Data Source Plant GARDEN
DOI/PMID 10.1093/pcp/pcag002 Data Source URL https://plantgarden.jp/
BUSCO Version 5.8.2 BUSCO Dataset eudicots_odb10
BUSCO Genome C:87.2%[S:7.1%,D:80.1%],F:1.0%,M:11.8%,n:2326 BUSCO Gene (pep/cds) C:87.6%[S:12.9%,D:74.8%],F:0.6%,M:11.8%,n:2326

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