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アセンブル , シーケンス , Assemble , Sequence , Vitis labruscana x Vitis vinifera , Hybrid grape , ブドウ欧米雑種

Vitis labruscana x Vitis vinifera

Genome Assembly ID:t2599122.G003

Sequence Name:VSMuph_r2.0

Details of the Assembled Genome Sequences

Assembly Name VSMuph_r2.0 Biological Sample cv. Shine Muscat
Number of Sequences 4,595 Number of Chromosomes 2n = 2x = 38
Total Length (bp) 488,971,633 N50 Length (bp) 23,937,529
Number of Genes 32,827 Number of Genes Source File VSMuph_r2.0.1_HC.pep
Number of Genes Annotated by Hayai-annotation 32,827 Hayai-Annotation Version zen_v2.0
Sequencing Method IlluminaPE, MP, 10XGenomics, Hi-C Read Depth 529x
Assembly Method Denovo MAGIC, Proximo Estimated Genome Size (Mb) 493
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Sachiko Isobe (Kazusa DNA Research Institute) Data Source Plant GARDEN
DOI/PMID 10.1093/dnares/dsac040 Data Source URL https://plantgarden.jp/
BUSCO Version 3.0.2 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:95.3%[S:93.6%,D:1.7%],F:1.4%,M:3.3%,n:1375 BUSCO Gene (pep/cds) C:88.9%[S:86.1%,D:2.8%],F:5.6%,M:5.5%,n:1375

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