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アセンブル , シーケンス , Assemble , Sequence , Hydrangea macrophylla , Hydrangea , アジサイ

Hydrangea macrophylla

Genome Assembly ID:t23110.G001

Sequence Name:HMA_r0.1

Details of the Assembled Genome Sequences

Assembly Name HMA_r0.1 Biological Sample Aogashima
Number of Sequences 613,685 Number of Chromosomes 2n = 2x = 36
Total Length (bp) 1,714,141,309 N50 Length (bp) 9,127
Number of Genes 371,923 Number of Genes Source File HMA_r0.1.augustus.gff3.pep.best.fa
Number of Genes Annotated by Hayai-annotation 371,923 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina Read Depth 144x
Assembly Method Platanus Estimated Genome Size (Mb) 2,164
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Nashima K (Nihon University) Data Source Plant GARDEN
DOI/PMID 10.1101/2020.06.14.151431 Data Source URL https://plantgarden.jp/
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:66.5%[S:63.9%,D:2.6%],F:21.9%,M:11.6%,n:1614 BUSCO Gene (pep/cds) C:46.9%[S:44.7%,D:2.2%],F:28.8%,M:24.3%,n:1614

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