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アセンブル , シーケンス , Assemble , Sequence , Arachis monticola , Wild peanut (monticola) , ラッカセイ野生種 (monticola種)

Arachis monticola

Genome Assembly ID:t227691.G001

Sequence Name:A.monticola_all_genome_v1.2

Details of the Assembled Genome Sequences

Assembly Name A.monticola_all_genome_v1.2 Biological Sample PI 263393
Number of Sequences 7,001 Number of Chromosomes 2n = 4x = 40
Total Length (bp) 2,618,824,336 N50 Length (bp) 124,915,013
Number of Genes 74,907 Number of Genes Source File A.monticola_all_genome_v1.2.pep
Number of Genes Annotated by Hayai-annotation 74,907 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBio, Illumina, BioNano optical Read Depth 197.1x
Assembly Method AllPaths v. SCR_010742; Celera Assembler v. 1.5; Falcon v. falcon-kit 0.7; WTDBG v. 1.0; IrysView package v. 2.5.1; LACHESIS v. Dec-2017 Estimated Genome Size (Mb) 2,700
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Dongmei Yin (Henan Agricultural University), Jinsong Zhang (Chinese Academy of Sciences) Data Source GIGA DB
DOI/PMID 10.1093/gigascience/giy066 Data Source URL http://gigadb.org/
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.2%[S:40.8%,D:57.4%],F:0.7%,M:1.1%,n:1614 BUSCO Gene (pep/cds) C:92.1%[S:40.0%,D:52.1%],F:2.7%,M:5.2%,n:1614

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