Sequence Name:A.monticola_all_genome_v1.2
Assembly Name | A.monticola_all_genome_v1.2 | Biological Sample | PI 263393 |
Number of Sequences | 7,001 | Number of Chromosomes | 2n = 4x = 40 |
Total Length (bp) | 2,618,824,336 | N50 Length (bp) | 124,915,013 |
Number of Genes | 74,907 | Number of Genes Source File | A.monticola_all_genome_v1.2.pep |
Number of Genes Annotated by Hayai-annotation | 74,907 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | PacBio, Illumina, BioNano optical | Read Depth | 197.1x |
Assembly Method | AllPaths v. SCR_010742; Celera Assembler v. 1.5; Falcon v. falcon-kit 0.7; WTDBG v. 1.0; IrysView package v. 2.5.1; LACHESIS v. Dec-2017 | Estimated Genome Size (Mb) | 2,700 |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Dongmei Yin (Henan Agricultural University), Jinsong Zhang (Chinese Academy of Sciences) | Data Source | GIGA DB |
DOI/PMID | 10.1093/gigascience/giy066 | Data Source URL | http://gigadb.org/ |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:98.2%[S:40.8%,D:57.4%],F:0.7%,M:1.1%,n:1614 | BUSCO Gene (pep/cds) | C:92.1%[S:40.0%,D:52.1%],F:2.7%,M:5.2%,n:1614 |