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アセンブル , シーケンス , Assemble , Sequence , Collinsia rattanii , Collinsia rattanii , コリンソウ (rattanii種)

Collinsia rattanii

Genome Assembly ID:t183431.G001

Sequence Name:rattanii_manual_breaks_bamfilt.final

Details of the Assembled Genome Sequences

Assembly Name rattanii_manual_breaks_bamfilt.final Biological Sample wild accession
Number of Sequences 5,029 Number of Chromosomes diploid(n = 7)
Total Length (bp) 506,580,232 N50 Length (bp) 69,253,743
Number of Genes 0 Number of Genes Source File NA
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina, Hi-C Read Depth 377x(Illumina), 72x(Hi-C)
Assembly Method HiRise Estimated Genome Size (Mb) 682(Kmer analysis from raw sequence reads), 673(Meraculous assembly)
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Rachel Spigler (Temple University) Data Source figshare
DOI/PMID 10.1093/g3journal/jkab177 Data Source URL https://gsajournals.figshare.com/articles/online_resource/Supplemental_Material_for_Frazee_et_al_2021/14599995
BUSCO Version BUSCO Dataset
BUSCO Genome BUSCO Gene (pep/cds)

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