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アセンブル , シーケンス , Assemble , Sequence , Artocarpus nanchuanensis , Artocarpus nanchuanensis , Artocarpus nanchuanensis

Artocarpus nanchuanensis

Genome Assembly ID:t1745975.G001

Sequence Name:Chr_genome

Details of the Assembled Genome Sequences

Assembly Name Chr_genome Biological Sample NA
Number of Sequences 28 Number of Chromosomes NA
Total Length (bp) 697,762,637 N50 Length (bp) 25,343,945
Number of Genes 41,636 Number of Genes Source File Chr_genome_final_gene.gff3.pep.gz
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method Oxford Nanopore, Hi-C Read Depth 160.34x (Nanopore), 62x (Hi-C)
Assembly Method SMARTdenovo, BWA v0.7.10-r789, LACHESIS Estimated Genome Size (Mb) 761
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Xianping Ding (Sichuan University) Data Source GIGA DB
DOI/PMID 10.1093/gigascience/giac042 Data Source URL http://gigadb.org/
BUSCO Version 5.8.2 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.2%[S:67.5%,D:30.7%],F:1.0%,M:0.8%,n:1614 BUSCO Gene (pep/cds) NA

Search Genes

Gene data has not been registered.

Cut-Out Genome Sequences

Chromosome /
Scaffolds
Start Position
End Position
Complementary Strand
fasta
format