Plant GARDEN How To ▶︎

JA

EN

アセンブル , シーケンス , Assemble , Sequence , Castanopsis hystrix , Castanopsis hystrix , クリガシ

Castanopsis hystrix

Genome Assembly ID:t167390.G001

Sequence Name:GWHBWDD00000000

Details of the Assembled Genome Sequences

Assembly Name GWHBWDD00000000 Biological Sample NA
Number of Sequences 172 Number of Chromosomes 2n = 2x = 24
Total Length (bp) 882,694,700 N50 Length (bp) 75,625,220
Number of Genes 36,900 Number of Genes Source File GWHBWDD00000000.Protein.faa.gz
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina, PacBio Sequel II, Hi-C Read Depth 59x (Illumina), 31x (PacBIo), 160x (Hi-C)
Assembly Method Hifiasm v0.15.4, ALLHiC, Juicebox Estimated Genome Size (Mb) 898
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Hanhan Xia (Zhongkai University of Agriculture and Engineering) Data Source Genome Warehouse
DOI/PMID 10.3389/fpls.2023.1174972 Data Source URL https://bigd.big.ac.cn/gwh/
BUSCO Version BUSCO Dataset
BUSCO Genome BUSCO Gene (pep/cds)

Search Genes

Gene data has not been registered.

Cut-Out Genome Sequences

Chromosome /
Scaffolds
Start Position
End Position
Complementary Strand
fasta
format