Plant GARDEN How To ▶︎



アセンブル , シーケンス , Assemble , Sequence , Actinidia rufa , Nashi-kazura , シマサルナシ

Actinidia rufa

Genome Assembly ID:t165716.G001

Sequence Name:ARU_r1.0

Details of the Assembled Genome Sequences

Assembly Name ARU_r1.0 Biological Sample Nakamura-B-male
Number of Sequences 29 Number of Chromosomes 2n = 2x = 58
Total Length (bp) 620,324,227 N50 Length (bp) 21,198,568
Number of Genes 63,947 Number of Genes Source File ARU1.0.proteins.fasta
Number of Genes Annotated by Hayai-annotation 63,947 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBio Hifi Read Depth NA
Assembly Method Hifiasm Estimated Genome Size (Mb) NA
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Takashi Akagi (Okayama University) Data Source Plant GARDEN
DOI/PMID 10.1038/s41477-023-01361-9 Data Source URL
BUSCO Version 5.1 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.5%[S:67.1%,D:31.4%],F:0.6%,M:0.9%,n:2326 BUSCO Gene (pep/cds) NA

Search Genes

Cut-Out Genome Sequences

Chromosome /
Start Position
End Position
Complementary Strand