Sequence Name:Opu_r1.4
Assembly Name | Opu_r1.4 | Biological Sample | NA |
Number of Sequences | 13 | Number of Chromosomes | 2n = 2x = 22 |
Total Length (bp) | 440,319,191 | N50 Length (bp) | 40,565,736 |
Number of Genes | 32,389 | Number of Genes Source File | Opu_r1.4_pep.fa |
Number of Genes Annotated by Hayai-annotation | 32,389 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | PacBio, Illumina, Bionano, Hi-C | Read Depth | NA |
Assembly Method | Canu v.1.7, Falcon-unzip v.1.3 | Estimated Genome Size (Mb) | 420 |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Amit Rai (Chiba University), Mami Yamazaki (ditto) | Data Source | Ophiorrhiza pumila Genome DataBase |
DOI/PMID | 10.1038/s41467-020-20508-2 | Data Source URL | http://pumila.kazusa.or.jp/ |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:98.0%[S:95.5%,D:2.5%],F:0.8%,M:1.2%,n:1614 | BUSCO Gene (pep/cds) | C:89.2%[S:86.6%,D:2.6%],F:3.7%,M:7.1%,n:1614 |