Sequence Name:Vradiata_ver6
Assembly Name | Vradiata_ver6 | Biological Sample | var. radiata, line VC1973A |
Number of Sequences | 2,497 | Number of Chromosomes | 2n = 2x = 22 |
Total Length (bp) | 463,085,359 | N50 Length (bp) | 25,360,630 |
Number of Genes | 23,181 | Number of Genes Source File | Vigna_radiata.Vradiata_ver6.pep.all.fa |
Number of Genes Annotated by Hayai-annotation | 23,181 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Illumina | Read Depth | 300.0x |
Assembly Method | Allpath-LG v. 42179 | Estimated Genome Size (Mb) | 548 |
Sequencing Method Comments | NA | Comments | The line VC1973A which was developed at the AVRDC-The World Vegetable Center in 1982. |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Rajeev K. Varshney (International Crops Research Institute for the Semi-Arid Tropics), Suk-Ha Lee (Seoul National University) | Data Source | Ensembl |
DOI/PMID | 10.1038/ncomms6443 | Data Source URL | http://plants.ensembl.org/index.html |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:98.2%[S:95.4%,D:2.8%],F:1.0%,M:0.8%,n:1614 | BUSCO Gene (pep/cds) | C:82.5%[S:77.3%,D:5.2%],F:10.7%,M:6.8%,n:1614 |