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アセンブル , シーケンス , Assemble , Sequence , Vigna radiata var. radiata , Mungbean (var. radiata) , リョクトウ, ヤエナリ (radiata変種)

Vigna radiata

Genome Assembly ID:t157791.G001

Sequence Name:Vradiata_ver6

Details of the Assembled Genome Sequences

Assembly Name Vradiata_ver6 Biological Sample var. radiata, line VC1973A
Number of Sequences 2,497 Number of Chromosomes 2n = 2x = 22
Total Length (bp) 463,085,359 N50 Length (bp) 25,360,630
Number of Genes 23,181 Number of Genes Source File Vigna_radiata.Vradiata_ver6.pep.all.fa
Number of Genes Annotated by Hayai-annotation 23,181 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina Read Depth 300.0x
Assembly Method Allpath-LG v. 42179 Estimated Genome Size (Mb) 548
Sequencing Method Comments NA Comments The line VC1973A which was developed at the AVRDC-The World Vegetable Center in 1982.
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Rajeev K. Varshney (International Crops Research Institute for the Semi-Arid Tropics), Suk-Ha Lee (Seoul National University) Data Source Ensembl
DOI/PMID 10.1038/ncomms6443 Data Source URL http://plants.ensembl.org/index.html
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.2%[S:95.4%,D:2.8%],F:1.0%,M:0.8%,n:1614 BUSCO Gene (pep/cds) C:82.5%[S:77.3%,D:5.2%],F:10.7%,M:6.8%,n:1614

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