Plant GARDEN How To ▶︎

JA

EN

アセンブル , シーケンス , Assemble , Sequence , Ceratotheca sesamoides , False sesame, Wild sesame , ニセゴマ, 野生ゴマ, ゴマ野生種 (Ceratotheca sesamoides種)

Ceratotheca sesamoides

Genome Assembly ID:t1503106.G001

Sequence Name:Cses_v1.0

Details of the Assembled Genome Sequences

Assembly Name Cses_v1.0 Biological Sample COL/GHANA/1993/MAFF/GJ93/233
Number of Sequences 168 Number of Chromosomes 2n = 2x = 32
Total Length (bp) 362,098,866 N50 Length (bp) 20,622,006
Number of Genes 24,170 Number of Genes Source File C.sesamoides_hic_annotation_v1.0_protein.fa
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina PE, PacBio CLR, Hi-C Read Depth 455x
Assembly Method Canu v2.1.1; Arrow (gcpp 1.0.0-SL-release-8.0.0); Pilon v1.24; YaHS v1.2a.1 Estimated Genome Size (Mb) 367
Sequencing Method Comments Comments
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Masayuki Yamamoto (Toyama University) Data Source Plant GARDEN
DOI/PMID Data Source URL https://plantgarden.jp/
BUSCO Version 5.4.3 BUSCO Dataset eudicots_odb10
BUSCO Genome C:98.3%[S:92.5%,D:5.8%],F:0.6%,M:1.1%,n:2326 BUSCO Gene (pep/cds) NA

Search Genes

Gene data has not been registered.

Cut-Out Genome Sequences

Genome sequence data has not been registered.