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アセンブル , シーケンス , Assemble , Sequence , Saccharum hybrid cultivar , Sugarcane , サトウキビ

Saccharum hybrid cultivar

Genome Assembly ID:t128810.G001

Sequence Name:sc.mlc.cns.sgl.utg.scga7

Details of the Assembled Genome Sequences

Assembly Name sc.mlc.cns.sgl.utg.scga7 Biological Sample cv. SP80-3280
Number of Sequences 450,609 Number of Chromosomes NA
Total Length (bp) 4,259,506,050 N50 Length (bp) 13,157
Number of Genes 374,774 Number of Genes Source File sc.mlc.cns.sgl.utg.scga7.predicted_protein.fasta.gz
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina, 454 Read Depth 1.9x (Illumina), 0.66x (454)
Assembly Method Celera, Phrap Estimated Genome Size (Mb) NA
Sequencing Method Comments NA Comments The authers assembled BACs individually using Phrap as described 10.1186/1471-2164-15-540.
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Glaucia Mendes Souza (University of Sao Paulo) Data Source GIGA DB
DOI/PMID 10.1093/gigascience/giz129 Data Source URL http://gigadb.org/
BUSCO Version BUSCO Dataset
BUSCO Genome BUSCO Gene (pep/cds)

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