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アセンブル , シーケンス , Assemble , Sequence , Streptocarpus rexii , Cape primrose , ストレプトカーパス

Streptocarpus rexii

Genome Assembly ID:t121488.G001

Sequence Name:Srexii.v1.0

Details of the Assembled Genome Sequences

Assembly Name Srexii.v1.0 Biological Sample KJong-Faraway [RBGE20180766-19870333]
Number of Sequences 5,855 Number of Chromosomes 2n = 2x = 32
Total Length (bp) 766,640,919 N50 Length (bp) 3,713,391
Number of Genes 44,947 Number of Genes Source File PG_Sr_cds_nuc.fa
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method Oxford Nanopore Technologies, PromethION Read Depth 170x
Assembly Method Canu v.1.8, Racon v.1.4.11, Medaka v.0.11.5 Estimated Genome Size (Mb) 929
Sequencing Method Comments NA Comments Reference of estimated genome size (Moeller, 2018 South African Journal of Botany 114:323-344)
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Kanae Nishii (Kanagawa University / Royal Botanic Garden Edinburgh) Data Source Plant GARDEN
DOI/PMID 10.1002/pld3.388 Data Source URL https://plantgarden.jp/
BUSCO Version 4.0.2 BUSCO Dataset viridiplantae_obo10
BUSCO Genome C:99.0%[S:82.1%,D:16.9%],F:0.7%,M:0.3%,n:425 BUSCO Gene (pep/cds) C:89.6%[S:77.4%,D:12.2%],F:8.9%,M:1.5%,n:425

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Gene data has not been registered.

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