Sequence Name:Srexii.v1.0
Assembly Name | Srexii.v1.0 | Biological Sample | KJong-Faraway [RBGE20180766-19870333] |
Number of Sequences | 5,855 | Number of Chromosomes | 2n = 2x = 32 |
Total Length (bp) | 766,640,919 | N50 Length (bp) | 3,713,391 |
Number of Genes | 44,947 | Number of Genes Source File | PG_Sr_cds_nuc.fa |
Number of Genes Annotated by Hayai-annotation | 0 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Oxford Nanopore Technologies, PromethION | Read Depth | 170x |
Assembly Method | Canu v.1.8, Racon v.1.4.11, Medaka v.0.11.5 | Estimated Genome Size (Mb) | 929 |
Sequencing Method Comments | NA | Comments | Reference of estimated genome size (Moeller, 2018 South African Journal of Botany 114:323-344) |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Kanae Nishii (Kanagawa University / Royal Botanic Garden Edinburgh) | Data Source | Plant GARDEN |
DOI/PMID | 10.1002/pld3.388 | Data Source URL | https://plantgarden.jp/ |
BUSCO Version | 4.0.2 | BUSCO Dataset | viridiplantae_obo10 |
BUSCO Genome | C:99.0%[S:82.1%,D:16.9%],F:0.7%,M:0.3%,n:425 | BUSCO Gene (pep/cds) | C:89.6%[S:77.4%,D:12.2%],F:8.9%,M:1.5%,n:425 |