Sequence Name:Lycium_chinense_genome_chromosomes
Assembly Name | Lycium_chinense_genome_chromosomes | Biological Sample | voucher Liujq202005 |
Number of Sequences | 12 | Number of Chromosomes | 2n = 24 |
Total Length (bp) | 1,408 | N50 Length (bp) | 132,783,878 |
Number of Genes | 52,296 | Number of Genes Source File | Lycium_chinense_genome_chromosomes.pep.fa.gz |
Number of Genes Annotated by Hayai-annotation | 52,296 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | PacBio Sequel II, Hi-C | Read Depth | 35.6x |
Assembly Method | hifiasm v0.12, Bowtie 2 v2.3.0, LACHESIS v1.0 | Estimated Genome Size (Mb) | 1,516,475,906 |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Jianquan Liu (Lanzhou University) | Data Source | Figshare |
DOI/PMID | 10.1038/s41467-023-44246-3 | Data Source URL | https://figshare.com |
BUSCO Version | 5.8.2 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:95.8%[S:83.1%,D:12.7%],F:0.9%,M:3.2%,n:1614 | BUSCO Gene (pep/cds) | C:92.1%[S:79.5%,D:12.6%],F:1.9%,M:6.1%,n:1614 |