Sequence Name:Gojo-0 v1
Sequence Name | Gojo-0 v1 | Biological Sample | Gojo-0 |
Number of Sequences | 8,493 | Number of Chromosomes | 2n = 2x = 18 |
Total Length (bp) | 3,045,060,000 | N50 Length (bp) | 347,131,000 |
Number of Genes | 74,259 | Number of Genes Source File | CsGojo-0_v1_HC.pep |
Number of Genes Annotated by Hayai-annotation | 74,259 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | PacBio, Hi-C | Read Depth | 107x |
Assembly Method | Platanus-allee v2.2.2, Flye, HiRise | Estimated Genome Size (Mb) | 3,150 |
Sequencing Method Comments | Comments | ||
DOI/PMID | Corresponding author | Mmakoto Kusaba (Hiroshima University) | |
Data Source | Plant GARDEN | Data Source URL | https://plantgarden.jp/ |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:98.6%[S:91.5%,D:7.1%],F:0.7%,M:0.7%,n:1614 | BUSCO Gene (pep/cds) | C:93.6%[S:86.4%,D:7.2%],F:2.1%,M:4.3%,n:1614 |