Plant GARDEN How To ▶︎

JA

EN

アセンブル , シーケンス , Assemble , Sequence , Prunus mume , Japanese apricot, Ume, Chinese apricot, Mei , ウメ

Prunus mume

Genome Assembly ID:t102107.G001

Sequence Name:P.mume_V1.0

Details of the Assembled Genome Sequences

Assembly Name P.mume_V1.0 Biological Sample BJFU1210120008
Number of Sequences 8,164 Number of Chromosomes 2n = 2x = 16
Total Length (bp) 234,030,239 N50 Length (bp) 24,358,521
Number of Genes 29,705 Number of Genes Source File GCF_000346735.1_P.mume_V1.0_protein.faa
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina Read Depth 180x
Assembly Method SOAPdenovo v. 1.05 Estimated Genome Size (Mb) 280
Sequencing Method Comments NA Comments Wild species in Tongmai town, Tibet, China
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Qixiang Zhang (Beijing Forestry University), Tangren Cheng (National Engineering Research Center for Floriculture), Jun Wang (BGI-Shenzhen) Data Source NCBI
DOI/PMID 10.1038/ncomms2290 Data Source URL https://www.ncbi.nlm.nih.gov/
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.7%[S:96.3%,D:2.4%],F:0.7%,M:0.6%,n:1614 BUSCO Gene (pep/cds) C:98.6%[S:77.5%,D:21.1%],F:0.8%,M:0.6%,n:1614

Search Genes

Gene data has not been registered.

Cut-Out Genome Sequences

Chromosome /
Scaffolds
Start Position
End Position
Complementary Strand
fasta
format