t3659.T000001 qFgr 5 fragrance QTL analysis (301176 x PK2011T202) x PK2011T202 BC1F1 CsBADH-AG NA NA 0 0 NA 0 0 19.96 10.1007/s00122-015-2554-5 NA NA t3659.T000002 parth1.1-2A 6 parthenocarpy QTL analysis 2A x Gy8 F2:3 E15M51-134 NA NA 0 0 NA 0 0 26 2.27 10.1111/j.1439-0523.2006.01225.x NA NA t3659.T000003 parth1.2-2A 6 parthenocarpy QTL analysis 2A x Gy8 F2:3 E23M59-435 NA NA 0 0 NA 0 0 61 2.8 10.1111/j.1439-0523.2006.01225.x NA NA t3659.T000004 parth1.3-Gy8 6 parthenocarpy QTL analysis 2A x Gy8 F2:3 E15M51-123 NA NA 0 0 NA 0 0 22 4 10.1111/j.1439-0523.2006.01225.x NA NA t3659.T000005 parth1.4-Gy8 6 parthenocarpy QTL analysis 2A x Gy8 F2:3 E12M62-230 NA NA 0 0 NA 0 0 50 2.7 10.1111/j.1439-0523.2006.01225.x NA NA t3659.T000006 parth1.5-Gy8 6 parthenocarpy QTL analysis 2A x Gy8 F2:3 E12M17-137 NA NA 0 0 NA 0 0 86 2.03 10.1111/j.1439-0523.2006.01225.x NA NA t3659.T000007 parth4.1-2A 6 parthenocarpy QTL analysis 2A x Gy8 F2:3 E14M52-193 NA NA 0 0 NA 0 0 69 2.87 10.1111/j.1439-0523.2006.01225.x NA NA t3659.T000008 parth4.2-Gy8 6 parthenocarpy QTL analysis 2A x Gy8 F2:3 E26M50-215 NA NA 0 0 NA 0 0 35 1.82 10.1111/j.1439-0523.2006.01225.x NA NA t3659.T000009 parth5.1-Gy8 6 parthenocarpy QTL analysis 2A x Gy8 F2:3 E18M61-332 NA NA 0 0 NA 0 0 33 2.33 10.1111/j.1439-0523.2006.01225.x NA NA t3659.T000010 parth5.2-Gy8 6 parthenocarpy QTL analysis 2A x Gy8 F2:3 E26M52-110 NA NA 0 0 NA 0 0 2 3 10.1111/j.1439-0523.2006.01225.x NA NA t3659.T000011 parth5.3-Gy8 6 parthenocarpy QTL analysis 2A x Gy8 F2:3 E26M62-154 NA NA 0 0 NA 0 0 17 2.45 10.1111/j.1439-0523.2006.01225.x NA NA t3659.T000012 qFgr 5 fragrance QTL analysis 301176 x PK2011T202 F2 CsBADH-AG NA NA 0 0 NA 0 0 44.45 10.1007/s00122-015-2554-5 NA NA t3659.T000013 5 bi-1, bi-3, fruit bitterness QTL analysis 9110Gt x 9930 RIL SSR00116 ASM407v2 5 4616645 4616793 SSR05321 NA 0 0 15.8 15.39 10.1093/jhered/ess075 t3659.M089888.1 NA t3659.T000014 5 bi-1, bi-3, fruit bitterness QTL analysis 9110Gt x 9930 RIL SSR00004 ASM407v2 6 6351523 6351709 SSR02309 6 5507817 5508085 21.5 14.5 10.1093/jhered/ess075 t3659.M001088.1 t3659.M001408.1 t3659.T000015 Foc2.1 1 Fusarium wilt resistance QTL analysis 9110Gt x 9930 RIL,F9 SSR17631 ASM407v2 2 3262390 3262528 NA 0 0 10.5 38.8 10.1007/s11032-014-0140-1 t3659.M000484.1 NA t3659.T000016 Foc2.2 1 Fusarium wilt resistance QTL analysis 9110Gt x 9930 RIL,F9 SSR03084 NA NA 0 0 NA 0 0 9.8 12.51 10.1007/s11032-014-0140-1 t3659.M000483.1 NA t3659.T000017 cl1 4 cotyledon length QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 17.6 3.8 10.1016/j.molp.2015.03.008 NA NA t3659.T000018 cl3 4 cotyledon length QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 64.2 12.4 10.1016/j.molp.2015.03.008 NA NA t3659.T000019 cl5 4 cotyledon length QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 62 6.2 10.1016/j.molp.2015.03.008 NA NA t3659.T000020 cl6 4 cotyledon length QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 63.6 6.7 10.1016/j.molp.2015.03.008 NA NA t3659.T000021 cw1 4 cotyledon width QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 157.7 5.3 10.1016/j.molp.2015.03.008 NA NA t3659.T000022 cw3 4 cotyledon width QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 62.2 11.4 10.1016/j.molp.2015.03.008 NA NA t3659.T000023 cw5 4 cotyledon width QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 67.4 9.7 10.1016/j.molp.2015.03.008 NA NA t3659.T000024 cw6 4 cotyledon width QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 63.6 7.9 10.1016/j.molp.2015.03.008 NA NA t3659.T000025 fl5.1 4 fruit length QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 132.9 11.5 10.1016/j.molp.2015.03.008 NA NA t3659.T000026 fl5.2 4 fruit length QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 96.9 7.8 10.1016/j.molp.2015.03.008 NA NA t3659.T000027 fl6.1 4 fruit length QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 125.7 7.4 10.1016/j.molp.2015.03.008 NA NA t3659.T000028 fl6.2 4 fruit length QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 193.2 5.5 10.1016/j.molp.2015.03.008 NA NA t3659.T000029 fl7 4 fruit length QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 96.3 3.6 10.1016/j.molp.2015.03.008 NA NA t3659.T000030 fnl6.1 4 fruit neck length QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 68.3 7.4 10.1016/j.molp.2015.03.008 NA NA t3659.T000031 fnl6.2 4 fruit neck length QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 79.1 10 10.1016/j.molp.2015.03.008 NA NA t3659.T000032 fr5 4 fruit ribbing QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 111.9 5.4 10.1016/j.molp.2015.03.008 NA NA t3659.T000033 fr6 4 fruit ribbing QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 193.8 9.9 10.1016/j.molp.2015.03.008 NA NA t3659.T000034 fws5 4 friut wart size QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 109.8 26 10.1016/j.molp.2015.03.008 NA NA t3659.T000035 fws6 4 friut wart size QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 91.3 5.7 10.1016/j.molp.2015.03.008 NA NA t3659.T000036 ll1 4 leaf length QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 152.5 10.8 10.1016/j.molp.2015.03.008 NA NA t3659.T000037 ll6 4 leaf length QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 124.2 8.7 10.1016/j.molp.2015.03.008 NA NA t3659.T000038 lw1 6 leaf width QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 152.5 11.3 10.1016/j.molp.2015.03.008 NA NA t3659.T000039 lw6.1 6 leaf width QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 124.2 5.2 10.1016/j.molp.2015.03.008 NA NA t3659.T000040 lw6.2 6 leaf width QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 203.3 6.2 10.1016/j.molp.2015.03.008 NA NA t3659.T000041 lw6.3 6 leaf width QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 81.2 5.3 10.1016/j.molp.2015.03.008 NA NA t3659.T000042 mfc3 4 fruit color, mature fruit color QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 229.4 5.3 10.1016/j.molp.2015.03.008 NA NA t3659.T000043 mfc5 4 fruit color, mature fruit color QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 103.7 8.3 10.1016/j.molp.2015.03.008 NA NA t3659.T000044 u5 4 fruit color, uniform immature fruit color QTL analysis 9930 x 9110Gt RIL,F10 NA NA 0 0 NA 0 0 117.3 31.1 10.1016/j.molp.2015.03.008 NA NA t3659.T000045 Ef1.1 4 early flowering, CsFT (Csa1G651710) QTL analysis 9930 x Muromskij F2 SSR00262 ASM407v2 1 25851586 25851792 NA 0 0 37.25 10.1007/s00122-014-2313-z t3659.M000045.1 NA t3659.T000046 4 MLB-1, MLB-2, MLB-3, MLB-4, multiple lateral branching QTL analysis BC2PHE BC2 L18-2/H19A NA NA 0 0 NA 0 0 7.4 10.4 10.1007/s00122-003-1313-1 NA NA t3659.T000047 4 MLB-1, MLB-2, MLB-3, MLB-4, multiple lateral branching QTL analysis BC2PHE BC2 CSWCT13 NA NA 0 0 NA 0 0 7.6 3.5 10.1007/s00122-003-1313-1 NA NA t3659.T000048 4 MLB-1, MLB-2, MLB-3, MLB-4, multiple lateral branching QTL analysis BC2PHE BC2 CSWTAAA01 ASM407v2 5 7964082 7964385 NA 0 0 34.1 4.6 10.1007/s00122-003-1313-1 t3659.M000248.1 NA t3659.T000049 fd1.1 4 Fruit diameter, Fruit diameter (FD) QTL analysis CC3 x SWCC8 RIL,F9 UW083738 NA NA 0 0 UW083751 NA 0 0 41.6 13.3 10.1007/s00122-014-2410-z NA NA t3659.T000050 fd4.1 4 Fruit diameter, Fruit diameter (FD) QTL analysis CC3 x SWCC8 RIL,F9 SSR03777 ASM407v2 4 4776454 4776662 SSR06253 4 8589776 8589928 26.2 8.8 10.1007/s00122-014-2410-z t3659.M000743.1 t3659.M001392.1 t3659.T000051 fd6.1 4 Fruit diameter, Fruit diameter (FD) QTL analysis CC3 x SWCC8 RIL,F9 SSR14008 NA NA 0 0 UW083871 NA 0 0 48.1 9.8 10.1007/s00122-014-2410-z t3659.M001127.1 NA t3659.T000052 fft1.1 4 flowering time, female flowering time (FFT) QTL analysis CC3 x SWCC8 RIL,F9 SSR05723 ASM407v2 1 22696836 22696998 SSR16695 1 24649281 24649624 96.5 20.6 10.1007/s00122-014-2410-z t3659.M000453.1 t3659.M000458.1 t3659.T000053 fft6.1 4 flowering time, female flowering time (FFT) QTL analysis CC3 x SWCC8 RIL,F9 SSR06500 ASM407v2 6 10260783 10260952 SSR13884 6 11069339 11069635 42.7 4.3 10.1007/s00122-014-2410-z t3659.M001113.1 t3659.M001120.1 t3659.T000054 fl1.1 4 Fruit length, Fruit length (FL) QTL analysis CC3 x SWCC8 RIL,F9 UW049617 ASM407v2 1 13511705 13511860 UW083732 NA 0 0 52.8 10 10.1007/s00122-014-2410-z t3659.M051179.1 NA t3659.T000055 fl3.1 4 Fruit length, Fruit length (FL) QTL analysis CC3 x SWCC8 RIL,F9 SSR07249 ASM407v2 3 4121138 4121270 SSR15029 3 8013515 8013731 17.1 8.4 10.1007/s00122-014-2410-z t3659.M001365.1 t3659.M000092.1 t3659.T000056 fl4.1 4 Fruit length, Fruit length (FL) QTL analysis CC3 x SWCC8 RIL,F9 SSR22862 NA NA 0 0 SSR00203 NA 0 0 69.3 4.1 10.1007/s00122-014-2410-z t3659.M000895.1 t3659.M000874.1 t3659.T000057 fl6.1 4 Fruit length, Fruit length (FL) QTL analysis CC3 x SWCC8 RIL,F9 SSR03940 ASM407v2 6 9245205 9245414 SSR04245 6 10816478 10816684 38.2 4.2 10.1007/s00122-014-2410-z t3659.M001107.1 t3659.M000963.1 t3659.T000058 fl7.1 4 Fruit length, Fruit length (FL) QTL analysis CC3 x SWCC8 RIL,F9 UW069662 ASM407v2 7 11118475 11118754 SSR14861 7 12975659 12975963 43.3 7.7 10.1007/s00122-014-2410-z t3659.M071215.1 t3659.M001310.1 t3659.T000059 fw2.1 5 Fruit weight, Fruit weight (FW) QTL analysis CC3 x SWCC8 RIL,F9 UW043299 ASM407v2 2 7507384 7507669 SSR02539 2 13768734 13768896 58.3 3.3 10.1007/s00122-014-2410-z t3659.M044865.1 t3659.M000521.1 t3659.T000060 fw4.1 5 Fruit weight, Fruit weight (FW) QTL analysis CC3 x SWCC8 RIL,F9 SSR03777 ASM407v2 4 4776454 4776662 SSR06253 4 8589776 8589928 26.2 4 10.1007/s00122-014-2410-z t3659.M000743.1 t3659.M001392.1 t3659.T000061 fw6.1 5 Fruit weight, Fruit weight (FW) QTL analysis CC3 x SWCC8 RIL,F9 SSR06500 ASM407v2 6 10260783 10260952 SSR13884 6 11069339 11069635 42.7 12.8 10.1007/s00122-014-2410-z t3659.M001113.1 t3659.M001120.1 t3659.T000062 dm1.1 1 extent of sporulation of first true leaf (LDTL-S: leaf disc assay, DLTL-S: detached-leaf assay), downy mildew resistance QTL analysis CS-PMR1 x Santou RIL CMN21_88 NA NA 0 0 CSN114 NA 0 0 4.75 16.8 10.1007/s10681-014-1102-8 NA NA t3659.T000063 dm1.1 1 extent of sporulation of first true leaf (LDTL-S: leaf disc assay, DLTL-S: detached-leaf assay), downy mildew resistance QTL analysis CS-PMR1 x Santou RIL CSWCT17 ASM407v2 5 23707711 23708375 SSR2895 NA 0 0 95.58 3.53 10.1007/s10681-014-1102-8 t3659.M001028.1 NA t3659.T000064 dm1.1 1 lesion expansion of first true leaf (LDTL-E: leaf disc assay, DLTL-E: detached-leaf assay), downy mildew resistance QTL analysis CS-PMR1 x Santou RIL CSN51 NA NA 0 0 NA 0 0 69.46 3.08 10.1007/s10681-014-1102-8 NA NA t3659.T000065 dm1.2 1 lesion expansion of cotyledons (DLC1-E, DLC2-E: detached-leaf assay), downy mildew resistance QTL analysis CS-PMR1 x Santou RIL CSJCT662 NA NA 0 0 CSN220 NA 0 0 45.2 4.28 10.1007/s10681-014-1102-8 NA NA t3659.T000066 dm1.3 1 lesion expansion of true leaves (FAS-E, FAA-E: greenhouse assay), downy mildew resistance QTL analysis CS-PMR1 x Santou RIL SSR231 NA NA 0 0 SSR21747 1 21296596 21296728 67.54 6.66 10.1007/s10681-014-1102-8 NA t3659.M000039.1 t3659.T000067 dm1.3 1 extent of sporulation of first true leaf (LDTL-S: leaf disc assay, DLTL-S: detached-leaf assay), downy mildew resistance QTL analysis CS-PMR1 x Santou RIL CMN21_80 NA NA 0 0 CSN002 NA 0 0 1.48 7.22 10.1007/s10681-014-1102-8 NA NA t3659.T000068 dm2.1 1 lesion expansion of true leaves (FAS-E, FAA-E: greenhouse assay), downy mildew resistance QTL analysis CS-PMR1 x Santou RIL CMTCN56 NA NA 0 0 SSR28327 4 15275255 15275432 65.73 6.23 10.1007/s10681-014-1102-8 NA t3659.M000859.1 t3659.T000069 dm3.1 1 extent of sporulation of cotyledons (DLC1-S, DLC2-S: detached-leaf assay), downy mildew resistance QTL analysis CS-PMR1 x Santou RIL SSR231 NA NA 0 0 SSR2733 NA 0 0 72.83 3.2 10.1007/s10681-014-1102-8 NA NA t3659.T000070 dm3.1 1 lesion expansion of cotyledons (DLC1-E, DLC2-E: detached-leaf assay), downy mildew resistance QTL analysis CS-PMR1 x Santou RIL CMN21_80 NA NA 0 0 CSN002 NA 0 0 6.92 4.55 10.1007/s10681-014-1102-8 NA NA t3659.T000071 dm3.1 1 extent of sporulation of first true leaf (LDTL-S: leaf disc assay, DLTL-S: detached-leaf assay), downy mildew resistance QTL analysis CS-PMR1 x Santou RIL CMTCN56 NA NA 0 0 SSR203 NA 0 0 70.13 9.86 10.1007/s10681-014-1102-8 NA NA t3659.T000072 dm3.2 1 lesion expansion of true leaves (FAS-E, FAA-E: greenhouse assay), downy mildew resistance QTL analysis CS-PMR1 x Santou RIL CSN052 NA NA 0 0 CU1458 NA 0 0 4.74 2.99 10.1007/s10681-014-1102-8 NA NA t3659.T000073 dm3.2 1 extent of sporulation of cotyledons (DLC1-S, DLC2-S: detached-leaf assay), downy mildew resistance QTL analysis CS-PMR1 x Santou RIL CSN002 NA NA 0 0 CSN166 NA 0 0 12.92 8.01 10.1007/s10681-014-1102-8 NA NA t3659.T000074 dm3.2 1 extent of sporulation of first true leaf (LDTL-S: leaf disc assay, DLTL-S: detached-leaf assay), downy mildew resistance QTL analysis CS-PMR1 x Santou RIL CSWTA04 ASM407v2 5 3710857 3711102 SSR7081 NA 0 0 12.69 5.09 10.1007/s10681-014-1102-8 t3659.M000905.1 NA t3659.T000075 dm4.1 1 lesion expansion of true leaves (FAS-E, FAA-E: greenhouse assay), downy mildew resistance QTL analysis CS-PMR1 x Santou RIL TJ10 NA NA 0 0 CSN161 NA 0 0 39 4.74 10.1007/s10681-014-1102-8 NA NA t3659.T000076 dm4.1 1 extent of sporulation of first true leaf (LDTL-S: leaf disc assay, DLTL-S: detached-leaf assay), downy mildew resistance QTL analysis CS-PMR1 x Santou RIL SSR3076 NA NA 0 0 SSR33278 7 17526230 17526434 64.52 3.65 10.1007/s10681-014-1102-8 NA t3659.M001336.1 t3659.T000077 dm5.1 1 extent of sporulation of first true leaf (LDTL-S: leaf disc assay, DLTL-S: detached-leaf assay), downy mildew resistance QTL analysis CS-PMR1 x Santou RIL CMN21_88 NA NA 0 0 CMAGN32 NA 0 0 2.43 8.16 10.1007/s10681-014-1102-8 NA NA t3659.T000078 dm5.1 1 extent of sporulation of cotyledons (DLC1-S, DLC2-S: detached-leaf assay), downy mildew resistance QTL analysis CS-PMR1 x Santou RIL SSR12510 ASM407v2 6 24914401 24914613 CSWCT03 6 24915021 24915410 30.92 2.98 10.1007/s10681-014-1102-8 t3659.M001214.1 t3659.M001440.1 t3659.T000079 dm5.1 1 lesion expansion of true leaves (FAS-E, FAA-E: greenhouse assay), downy mildew resistance QTL analysis CS-PMR1 x Santou RIL CSWTA04 ASM407v2 5 3710857 3711102 CSWCT32 NA 0 0 20.89 6.82 10.1007/s10681-014-1102-8 t3659.M000905.1 t3659.M001479.1 t3659.T000080 dm5.2 1 lesion expansion of cotyledons (DLC1-E, DLC2-E: detached-leaf assay), downy mildew resistance QTL analysis CS-PMR1 x Santou RIL STS116 NA NA 0 0 CSWTA13 5 16230417 16230718 51.77 3.33 10.1007/s10681-014-1102-8 NA t3659.M001518.1 t3659.T000081 dm5.3 1 extent of sporulation of first true leaf (LDTL-S: leaf disc assay, DLTL-S: detached-leaf assay), downy mildew resistance QTL analysis CS-PMR1 x Santou RIL NA NA 0 0 NA 0 0 68.54 4.36 10.1007/s10681-014-1102-8 NA NA t3659.T000082 dm5.3 1 extent of sporulation of cotyledons (DLC1-S, DLC2-S: detached-leaf assay), downy mildew resistance QTL analysis CS-PMR1 x Santou RIL CSWTA04 ASM407v2 5 3710857 3711102 SSR7081 NA 0 0 16.69 4.5 10.1007/s10681-014-1102-8 t3659.M000905.1 NA t3659.T000083 dm6.1 1 lesion expansion of cotyledons (DLC1-E, DLC2-E: detached-leaf assay), downy mildew resistance QTL analysis CS-PMR1 x Santou RIL CSJCT77 ASM407v2 6 15582907 15583044 NA 0 0 44.08 2.88 10.1007/s10681-014-1102-8 t3659.M090109.1 NA t3659.T000084 dm6.2 1 lesion expansion of cotyledons (DLC1-E, DLC2-E: detached-leaf assay), downy mildew resistance QTL analysis CS-PMR1 x Santou RIL SSR12898 ASM407v2 6 24773289 24773659 SSR6240 NA 0 0 80.75 4.05 10.1007/s10681-014-1102-8 t3659.M001212.1 NA t3659.T000085 dm6.2 1 lesion expansion of first true leaf (LDTL-E: leaf disc assay, DLTL-E: detached-leaf assay), downy mildew resistance QTL analysis CS-PMR1 x Santou RIL CSWTA11B NA NA 0 0 SSR215 NA 0 0 30.84 4.69 10.1007/s10681-014-1102-8 t3659.M001516.1 NA t3659.T000086 dm7.1 1 lesion expansion of first true leaf (LDTL-E: leaf disc assay, DLTL-E: detached-leaf assay), downy mildew resistance QTL analysis CS-PMR1 x Santou RIL CSJCT661 NA NA 0 0 SSR7081 NA 0 0 19.33 3.24 10.1007/s10681-014-1102-8 NA NA t3659.T000087 dm7.2 1 extent of sporulation of first true leaf (LDTL-S: leaf disc assay, DLTL-S: detached-leaf assay), downy mildew resistance QTL analysis CS-PMR1 x Santou RIL TJ10 NA NA 0 0 CSN161 NA 0 0 30.92 3.35 10.1007/s10681-014-1102-8 NA NA t3659.T000088 pm1.1 1 powdery mildew resistance QTL analysis CS-PMR1 x Santou RIL SSR231 NA NA 0 0 SSR1737 NA 0 0 58.5 5.7 10.1007/s11032-013-9867-3 NA NA t3659.T000089 pm1.1 1 powdery mildew resistance QTL analysis CS-PMR1 x Santou RIL SSR28327 ASM407v2 4 15275255 15275432 CU1791 NA 0 0 69.1 4.3 10.1007/s11032-013-9867-3 t3659.M000859.1 NA t3659.T000090 pm1.1 1 powdery mildew resistance QTL analysis CS-PMR1 x Santou RIL SSR20165 ASM407v2 5 12594760 12594924 SSR2693 NA 0 0 40.4 14.8 10.1007/s11032-013-9867-3 t3659.M000942.1 NA t3659.T000091 pm1.1 1 powdery mildew resistance QTL analysis CS-PMR1 x Santou RIL SSR7198 NA NA 0 0 CS41 6 15109733 15109902 17.1 10.4 10.1007/s11032-013-9867-3 NA t3659.M001139.1 t3659.T000092 pm1.2 1 powdery mildew resistance QTL analysis CS-PMR1 x Santou RIL SSR231 NA NA 0 0 CS27 1 21103898 21104127 61.5 3.9 10.1007/s11032-013-9867-3 NA t3659.M090531.1 t3659.T000093 pm2.1 1 powdery mildew resistance QTL analysis CS-PMR1 x Santou RIL SSR231 NA NA 0 0 SSR1091 NA 0 0 65.5 2.8 10.1007/s11032-013-9867-3 NA NA t3659.T000094 pm3.1 1 powdery mildew resistance QTL analysis CS-PMR1 x Santou RIL SSR231 NA NA 0 0 SSR2733 NA 0 0 57.5 6.4 10.1007/s11032-013-9867-3 NA NA t3659.T000095 pm4.1 1 powdery mildew resistance QTL analysis CS-PMR1 x Santou RIL SSR10134 ASM407v2 1 8146471 8146627 SSR231 NA 0 0 28.9 14.6 10.1007/s11032-013-9867-3 t3659.M000397.1 NA t3659.T000096 pm5.1 1 powdery mildew resistance QTL analysis CS-PMR1 x Santou RIL SSR10134 ASM407v2 1 8146471 8146627 SSR7405 NA 0 0 28.9 5.2 10.1007/s11032-013-9867-3 t3659.M000397.1 NA t3659.T000097 pm5.2 1 powdery mildew resistance QTL analysis CS-PMR1 x Santou RIL SSR218 NA NA 0 0 CSWCT04 NA 0 0 57.1 2.9 10.1007/s11032-013-9867-3 NA t3659.M001441.1 t3659.T000098 pm5.3 1 powdery mildew resistance QTL analysis CS-PMR1 x Santou RIL CMN21_80 NA NA 0 0 CSN251 NA 0 0 0.1 4.5 10.1007/s11032-013-9867-3 NA NA t3659.T000099 pm6.1 1 powdery mildew resistance QTL analysis CS-PMR1 x Santou RIL SSR28327 ASM407v2 4 15275255 15275432 CU1791 NA 0 0 70.1 4.2 10.1007/s11032-013-9867-3 t3659.M000859.1 NA t3659.T000100 fft2.1 5 fruit flesh thickness, fruit flesh thickness measured 12 days after self-pollination QTL analysis D8 x XUE1 F2 SSR00204 ASM407v2 2 4182440 4182584 SSR21486 2 10234088 10234279 3.39 10.1038/srep15829 t3659.M000490.1 t3659.M000514.1 t3659.T000101 ant1.1 4 Days to anthesis, little-leaf (ll) trait (ant1.1) QTL analysis G42 x H-19 RIL ll NA NA 0 0 NA 0 0 79.3 3 10.1007/s00122-003-1277-1 NA NA t3659.T000102 ant1.1 4 Days to anthesis, little-leaf (ll) trait (ant1.1) QTL analysis G42 x H-19 RIL AT1-2-SCAR NA NA 0 0 NA 0 0 62.3 4.7 10.1007/s00122-003-1277-1 NA NA t3659.T000103 ant2.1 4 Days to anthesis, little-leaf (ll) trait (ant1.1) QTL analysis G42 x H-19 RIL ll NA NA 0 0 NA 0 0 79.3 3.5 10.1007/s00122-003-1277-1 NA NA t3659.T000104 ant5.1 4 Days to anthesis, little-leaf (ll) trait (ant1.1) QTL analysis G42 x H-19 RIL E11M60-114 NA NA 0 0 NA 0 0 33.8 2.7 10.1007/s00122-003-1277-1 NA NA t3659.T000105 ant6.1 4 Days to anthesis, little-leaf (ll) trait (ant1.1) QTL analysis G42 x H-19 RIL ETGMCAA-205 NA NA 0 0 NA 0 0 85.1 2.6 10.1007/s00122-003-1277-1 NA NA t3659.T000106 ear1.2 6 Earliness, little-leaf (ll) trait (ear1.5) QTL analysis G42 x H-19 RIL CSWCT28 ASM407v2 6 25079301 25079508 NA 0 0 3.6 7.1 10.1007/s00122-003-1277-1 t3659.M000002.1 NA t3659.T000107 ear1.3 6 Earliness, little-leaf (ll) trait (ear1.5) QTL analysis G42 x H-19 RIL OP-AG1-1 NA NA 0 0 NA 0 0 28 6.4 10.1007/s00122-003-1277-1 NA NA t3659.T000108 ear1.4 6 Earliness, little-leaf (ll) trait (ear1.5) QTL analysis G42 x H-19 RIL OP-AJ6 NA NA 0 0 NA 0 0 57.7 2.7 10.1007/s00122-003-1277-1 NA NA t3659.T000109 ear1.5 6 Earliness, little-leaf (ll) trait (ear1.5) QTL analysis G42 x H-19 RIL ll NA NA 0 0 NA 0 0 77.8 4.1 10.1007/s00122-003-1277-1 NA NA t3659.T000110 fnl1.1 6 Number of female nodes on primary lateral branches, gynoecious (F) trait (fnl1.1), little-leaf (ll) trait (fnl1.4) QTL analysis G42 x H-19 RIL F NA NA 0 0 NA 0 0 1.5 3.8 10.1007/s00122-003-1277-1 t3659.M090176.1 NA t3659.T000111 fnl1.2 6 Number of female nodes on primary lateral branches, gynoecious (F) trait (fnl1.1), little-leaf (ll) trait (fnl1.4) QTL analysis G42 x H-19 RIL E13M50-454 NA NA 0 0 NA 0 0 18 2.6 10.1007/s00122-003-1277-1 NA NA t3659.T000112 fnl1.3 6 Number of female nodes on primary lateral branches, gynoecious (F) trait (fnl1.1), little-leaf (ll) trait (fnl1.4) QTL analysis G42 x H-19 RIL CSWCTT14 NA NA 0 0 NA 0 0 22.3 3.3 10.1007/s00122-003-1277-1 t3659.M000001.1 NA t3659.T000113 fnl1.4 6 Number of female nodes on primary lateral branches, gynoecious (F) trait (fnl1.1), little-leaf (ll) trait (fnl1.4) QTL analysis G42 x H-19 RIL ll NA NA 0 0 NA 0 0 79.3 3.7 10.1007/s00122-003-1277-1 NA NA t3659.T000114 fpl1.1 3 Cumulative fruits per plant over three harvests, little-leaf (ll) trait (fpl1.2) QTL analysis G42 x H-19 RIL I1B-SCAR NA NA 0 0 NA 0 0 55.7 3.4 10.1007/s00122-003-1277-1 NA NA t3659.T000115 fpl1.1 3 Cumulative fruits per plant over three harvests, little-leaf (ll) trait (fpl1.2) QTL analysis G42 x H-19 RIL OP-AG1-2 NA NA 0 0 NA 0 0 40.8 7.4 10.1007/s00122-003-1277-1 NA NA t3659.T000116 fpl1.1 3 Cumulative fruits per plant over three harvests, little-leaf (ll) trait (fpl1.2) QTL analysis G42 x H-19 RIL OP-AG17-1 NA NA 0 0 NA 0 0 25 2.6 10.1007/s00122-003-1277-1 NA NA t3659.T000117 fpl1.2 3 Cumulative fruits per plant over three harvests, little-leaf (ll) trait (fpl1.2) QTL analysis G42 x H-19 RIL ll NA NA 0 0 NA 0 0 79.3 15.2 10.1007/s00122-003-1277-1 NA NA t3659.T000118 fpl4.1 3 Cumulative fruits per plant over three harvests, little-leaf (ll) trait (fpl1.2) QTL analysis G42 x H-19 RIL ll NA NA 0 0 NA 0 0 79.3 2.9 10.1007/s00122-003-1277-1 NA NA t3659.T000119 fpl4.2 3 Cumulative fruits per plant over three harvests, little-leaf (ll) trait (fpl1.2) QTL analysis G42 x H-19 RIL AO14-SCAR NA NA 0 0 NA 0 0 27.9 3.3 10.1007/s00122-003-1277-1 NA NA t3659.T000120 fpl5.1 3 Cumulative fruits per plant over three harvests, little-leaf (ll) trait (fpl1.2) QTL analysis G42 x H-19 RIL AO14-SCAR NA NA 0 0 NA 0 0 27.9 2.7 10.1007/s00122-003-1277-1 NA NA t3659.T000121 fpl6.1 3 Cumulative fruits per plant over three harvests, little-leaf (ll) trait (fpl1.2) QTL analysis G42 x H-19 RIL CSWTAAA01 ASM407v2 5 7964082 7964385 NA 0 0 36.4 7.2 10.1007/s00122-003-1277-1 t3659.M000248.1 NA t3659.T000122 fpl7.1 3 Cumulative fruits per plant over three harvests, little-leaf (ll) trait (fpl1.2) QTL analysis G42 x H-19 RIL E14M62-515 NA NA 0 0 NA 0 0 1.6 3.6 10.1007/s00122-003-1277-1 NA NA t3659.T000123 ldr1.1 6 Mean length:diameter ratio over three harvests, little-leaf (ll) trait (ldr1.3) QTL analysis G42 x H-19 RIL L18-2H19A ASM407v2 6 25181707 25182033 NA 0 0 3.6 3.6 10.1007/s00122-003-1277-1 t3659.M000328.1 NA t3659.T000124 ldr1.1 6 Mean length:diameter ratio over three harvests, little-leaf (ll) trait (ldr1.3) QTL analysis G42 x H-19 RIL OP-AG1-2 NA NA 0 0 NA 0 0 60.3 3.2 10.1007/s00122-003-1277-1 NA NA t3659.T000125 ldr1.1 6 Mean length:diameter ratio over three harvests, little-leaf (ll) trait (ldr1.3) QTL analysis G42 x H-19 RIL BC515 NA NA 0 0 NA 0 0 0 4.2 10.1007/s00122-003-1277-1 NA NA t3659.T000126 ldr1.2 6 Mean length:diameter ratio over three harvests, little-leaf (ll) trait (ldr1.3) QTL analysis G42 x H-19 RIL L18-2H19A ASM407v2 6 25181707 25182033 NA 0 0 3.6 5.6 10.1007/s00122-003-1277-1 t3659.M000328.1 NA t3659.T000127 ldr1.3 6 Mean length:diameter ratio over three harvests, little-leaf (ll) trait (ldr1.3) QTL analysis G42 x H-19 RIL E14M62-273 NA NA 0 0 NA 0 0 25.7 4.6 10.1007/s00122-003-1277-1 NA NA t3659.T000128 ldr4.1 6 Mean length:diameter ratio over three harvests, little-leaf (ll) trait (ldr1.3) QTL analysis G42 x H-19 RIL ll NA NA 0 0 NA 0 0 77.8 8.6 10.1007/s00122-003-1277-1 NA NA t3659.T000129 ldr4.2 6 Mean length:diameter ratio over three harvests, little-leaf (ll) trait (ldr1.3) QTL analysis G42 x H-19 RIL ll NA NA 0 0 NA 0 0 77.8 6 10.1007/s00122-003-1277-1 NA NA t3659.T000130 ldr4.3 6 Mean length:diameter ratio over three harvests, little-leaf (ll) trait (ldr1.3) QTL analysis G42 x H-19 RIL OP-L18-1 NA NA 0 0 NA 0 0 33.1 5.4 10.1007/s00122-003-1277-1 NA NA t3659.T000131 ldr4.4 6 Mean length:diameter ratio over three harvests, little-leaf (ll) trait (ldr1.3) QTL analysis G42 x H-19 RIL E11M60-313 NA NA 0 0 NA 0 0 37.9 4.7 10.1007/s00122-003-1277-1 NA NA t3659.T000132 ldr6.1 6 Mean length:diameter ratio over three harvests, little-leaf (ll) trait (ldr1.3) QTL analysis G42 x H-19 RIL OP-AF15 NA NA 0 0 NA 0 0 100 2.8 10.1007/s00122-003-1277-1 NA NA t3659.T000133 ldr6.2 6 Mean length:diameter ratio over three harvests, little-leaf (ll) trait (ldr1.3) QTL analysis G42 x H-19 RIL H5-SCAR NA NA 0 0 NA 0 0 151.9 3.6 10.1007/s00122-003-1277-1 NA NA t3659.T000134 ldr6.3 6 Mean length:diameter ratio over three harvests, little-leaf (ll) trait (ldr1.3) QTL analysis G42 x H-19 RIL I1-SCAR NA NA 0 0 NA 0 0 22.7 4.2 10.1007/s00122-003-1277-1 NA NA t3659.T000135 ldr6.4 6 Mean length:diameter ratio over three harvests, little-leaf (ll) trait (ldr1.3) QTL analysis G42 x H-19 RIL I1-SCAR NA NA 0 0 NA 0 0 22.7 7.3 10.1007/s00122-003-1277-1 NA NA t3659.T000136 ldr7.1 6 Mean length:diameter ratio over three harvests, little-leaf (ll) trait (ldr1.3) QTL analysis G42 x H-19 RIL OP-U15-1 NA NA 0 0 NA 0 0 27.8 6.1 10.1007/s00122-003-1277-1 NA NA t3659.T000137 mlb1.1 4 Lateral branch number, little-leaf (ll) trait (mlb1.4) QTL analysis G42 x H-19 RIL E14M62-273 NA NA 0 0 NA 0 0 25.7 11.6 10.1007/s00122-003-1277-1 NA NA t3659.T000138 mlb1.1 4 Lateral branch number, little-leaf (ll) trait (mlb1.4) QTL analysis G42 x H-19 RIL CSWTAAA01 ASM407v2 5 7964082 7964385 NA 0 0 36.4 4.6 10.1007/s00122-003-1277-1 t3659.M000248.1 NA t3659.T000139 mlb1.1 4 Lateral branch number, little-leaf (ll) trait (mlb1.4) QTL analysis G42 x H-19 RIL E14M62-515 NA NA 0 0 NA 0 0 6.1 6.1 10.1007/s00122-003-1277-1 NA NA t3659.T000140 mlb1.1 4 Lateral branch number, little-leaf (ll) trait (mlb1.4) QTL analysis G42 x H-19 RIL L19-2-SCAR NA NA 0 0 NA 0 0 121.3 4.2 10.1007/s00122-003-1277-1 NA NA t3659.T000141 mlb1.1 4 Lateral branch number, little-leaf (ll) trait (mlb1.4) QTL analysis G42 x H-19 RIL EACMCAC-195 NA NA 0 0 NA 0 0 6.1 3.8 10.1007/s00122-003-1277-1 NA NA t3659.T000142 mlb1.2 4 Lateral branch number, little-leaf (ll) trait (mlb1.4) QTL analysis G42 x H-19 RIL E14M62-273 NA NA 0 0 NA 0 0 25.7 8.2 10.1007/s00122-003-1277-1 NA NA t3659.T000143 mlb1.3 4 Lateral branch number, little-leaf (ll) trait (mlb1.4) QTL analysis G42 x H-19 RIL E14M62-273 NA NA 0 0 NA 0 0 25.7 6.8 10.1007/s00122-003-1277-1 NA NA t3659.T000144 mlb1.4 4 Lateral branch number, little-leaf (ll) trait (mlb1.4) QTL analysis G42 x H-19 RIL CSWCT16 NA NA 0 0 NA 0 0 40.9 3.7 10.1007/s00122-003-1277-1 NA NA t3659.T000145 mlb3.1 4 Lateral branch number, little-leaf (ll) trait (mlb1.4) QTL analysis G42 x H-19 RIL OP-AJ6 NA NA 0 0 NA 0 0 56.2 3.1 10.1007/s00122-003-1277-1 NA NA t3659.T000146 mlb4.1 4 Lateral branch number, little-leaf (ll) trait (mlb1.4) QTL analysis G42 x H-19 RIL ll NA NA 0 0 NA 0 0 79.3 32.9 10.1007/s00122-003-1277-1 NA NA t3659.T000147 mlb4.2 4 Lateral branch number, little-leaf (ll) trait (mlb1.4) QTL analysis G42 x H-19 RIL ll NA NA 0 0 NA 0 0 79.3 7 10.1007/s00122-003-1277-1 NA NA t3659.T000148 mlb4.3 4 Lateral branch number, little-leaf (ll) trait (mlb1.4) QTL analysis G42 x H-19 RIL ll NA NA 0 0 NA 0 0 79.3 9.8 10.1007/s00122-003-1277-1 NA NA t3659.T000149 mlb4.4 4 Lateral branch number, little-leaf (ll) trait (mlb1.4) QTL analysis G42 x H-19 RIL G14-SCAR NA NA 0 0 NA 0 0 2.4 3.5 10.1007/s00122-003-1277-1 NA NA t3659.T000150 mlb5.1 4 Lateral branch number, little-leaf (ll) trait (mlb1.4) QTL analysis G42 x H-19 RIL AA9B-SCAR NA NA 0 0 NA 0 0 0 5.3 10.1007/s00122-003-1277-1 NA NA t3659.T000151 mlb6.1 4 Lateral branch number, little-leaf (ll) trait (mlb1.4) QTL analysis G42 x H-19 RIL OP-H13 NA NA 0 0 NA 0 0 10.9 2.9 10.1007/s00122-003-1277-1 NA NA t3659.T000152 mlb6.2 4 Lateral branch number, little-leaf (ll) trait (mlb1.4) QTL analysis G42 x H-19 RIL AJ18-SCAR NA NA 0 0 NA 0 0 21.7 2.8 10.1007/s00122-003-1277-1 NA NA t3659.T000153 mlb7.1 4 Lateral branch number, little-leaf (ll) trait (mlb1.4) QTL analysis G42 x H-19 RIL CSWTAAA01 ASM407v2 5 7964082 7964385 NA 0 0 36.4 3 10.1007/s00122-003-1277-1 t3659.M000248.1 NA t3659.T000154 nfp1.1 3 Number of fruits per plant for harvests QTL analysis G42 x H-19 RIL J5-SCAR NA NA 0 0 NA 0 0 10.4 2.7 10.1007/s00122-003-1277-1 NA NA t3659.T000155 nfp1.1 3 Number of fruits per plant for harvests QTL analysis G42 x H-19 RIL EACMCAC-119 NA NA 0 0 NA 0 0 7.2 3.8 10.1007/s00122-003-1277-1 NA NA t3659.T000156 nfp1.1 3 Number of fruits per plant for harvests QTL analysis G42 x H-19 RIL AK5-SCAR NA NA 0 0 NA 0 0 38.6 5.5 10.1007/s00122-003-1277-1 NA NA t3659.T000157 nfp1.2 3 Number of fruits per plant for harvests QTL analysis G42 x H-19 RIL CSWCT16 NA NA 0 0 NA 0 0 43.9 4.1 10.1007/s00122-003-1277-1 NA NA t3659.T000158 nfp1.3 3 Number of fruits per plant for harvests QTL analysis G42 x H-19 RIL E14M62-214 NA NA 0 0 NA 0 0 50.3 2.8 10.1007/s00122-003-1277-1 NA NA t3659.T000159 nfp1.4 3 Number of fruits per plant for harvests QTL analysis G42 x H-19 RIL E14M62-214 NA NA 0 0 NA 0 0 50.3 4.9 10.1007/s00122-003-1277-1 NA NA t3659.T000160 nfp1.5 3 Number of fruits per plant for harvests QTL analysis G42 x H-19 RIL OP-AJ6 NA NA 0 0 NA 0 0 56.2 3 10.1007/s00122-003-1277-1 NA NA t3659.T000161 nfp2.1 3 Number of fruits per plant for harvests QTL analysis G42 x H-19 RIL OP-AJ6 NA NA 0 0 NA 0 0 56.2 4.1 10.1007/s00122-003-1277-1 NA NA t3659.T000162 nfp2.2 3 Number of fruits per plant for harvests QTL analysis G42 x H-19 RIL OP-AJ6 NA NA 0 0 NA 0 0 56.2 4.5 10.1007/s00122-003-1277-1 NA NA t3659.T000163 nfp3.1 3 Number of fruits per plant for harvests QTL analysis G42 x H-19 RIL EACMCAC-107 NA NA 0 0 NA 0 0 60.9 4.4 10.1007/s00122-003-1277-1 NA NA t3659.T000164 nfp4.1 3 Number of fruits per plant for harvests QTL analysis G42 x H-19 RIL OP-AF7-1 NA NA 0 0 NA 0 0 21 4.1 10.1007/s00122-003-1277-1 NA NA t3659.T000165 nfp5.1 3 Number of fruits per plant for harvests QTL analysis G42 x H-19 RIL NR2 ASM407v2 2 3086419 3086585 NA 0 0 25.8 7.2 10.1007/s00122-003-1277-1 t3659.M000265.1 NA t3659.T000166 nfp6.1 3 Number of fruits per plant for harvests QTL analysis G42 x H-19 RIL CMGA165 NA NA 0 0 NA 0 0 5.3 5.1 10.1007/s00122-003-1277-1 t3659.M000264.1 NA t3659.T000167 nfp6.2 3 Number of fruits per plant for harvests QTL analysis G42 x H-19 RIL AJ18-SCAR NA NA 0 0 NA 0 0 21.7 3 10.1007/s00122-003-1277-1 NA NA t3659.T000168 nfp6.3 3 Number of fruits per plant for harvests QTL analysis G42 x H-19 RIL AJ18-SCAR NA NA 0 0 NA 0 0 21.7 5.5 10.1007/s00122-003-1277-1 NA NA t3659.T000169 sex1.1 6 Number of female nodes on mainstem, gynoecious (F) trait (sex1.1), determinate (de) trait (sex1.2) QTL analysis G42 x H-19 RIL F NA NA 0 0 NA 0 0 1.5 13 10.1007/s00122-003-1277-1 t3659.M090176.1 NA t3659.T000170 sex1.2 6 Number of female nodes on mainstem, gynoecious (F) trait (sex1.1), determinate (de) trait (sex1.2) QTL analysis G42 x H-19 RIL de NA NA 0 0 NA 0 0 25.7 7.3 10.1007/s00122-003-1277-1 NA NA t3659.T000171 sex6.1 6 Number of female nodes on mainstem, gynoecious (F) trait (sex1.1), determinate (de) trait (sex1.2) QTL analysis G42 x H-19 RIL AT1-2-SCAR NA NA 0 0 NA 0 0 63.8 5 10.1007/s00122-003-1277-1 NA NA t3659.T000172 MLB1 (mlb1.4) 4 multiple lateral branching (MLB) QTL analysis Gy-7 x H-19 RIL OP-AD12-1 NA NA 0 0 ll NA 0 0 32.9 10.1007/s11032-008-9162-x NA NA t3659.T000173 MLB1 (mlb1.4) 4 multiple lateral branching (MLB) QTL analysis Gy-7 x H-19 RIL CSWTAAA01 ASM407v2 5 7964082 7964385 NA 0 0 4.6 10.1007/s11032-008-9162-x t3659.M000248.1 NA t3659.T000174 MLB1 (mlb1.4) 4 multiple lateral branching (MLB) QTL analysis Gy-7 x H-19 RIL L19-2-SCAR NA NA 0 0 NR60 NA 0 0 4.2 10.1007/s11032-008-9162-x NA t3659.M000266.1 t3659.T000175 MLB2 (mlb1.1) 4 multiple lateral branching (MLB) QTL analysis Gy-7 x H-19 F2:3 OP-AG1-1 NA NA 0 0 NA 0 0 10.4 10.1007/s11032-008-9162-x NA NA t3659.T000176 MLB3 (mlb6.2) 4 multiple lateral branching (MLB) QTL analysis Gy-7 x H-19 RIL OP-AD12-1- ll NA NA 0 0 NA 0 0 9.8 10.1007/s11032-008-9162-x NA NA t3659.T000177 MLB4 4 multiple lateral branching (MLB) QTL analysis Gy-7 x H-19 F2:3 OP-AG1-1 NA NA 0 0 NA 0 0 10.1 10.1007/s11032-008-9162-x NA NA t3659.T000178 MLB5 (mlb4.4) 4 multiple lateral branching (MLB) QTL analysis Gy-7 x H-19 RIL OP-AG1-1 NA NA 0 0 NA 0 0 11.6 10.1007/s11032-008-9162-x NA NA t3659.T000179 MLB6 (mlb6.1) 4 multiple lateral branching (MLB) QTL analysis Gy-7 x H-19 RIL OP-AG1-1 NA NA 0 0 NA 0 0 8.2 10.1007/s11032-008-9162-x NA NA t3659.T000180 1 Gummy stem blight (GSB) resistance QTL analysis IL HH1-8-1-2 x 8419 F2 SSR26165 ASM407v2 4 15188605 15188761 NA 0 0 10.1007/s10681-013-0860-z t3659.M000854.1 NA t3659.T000181 1 Gummy stem blight (GSB) resistance QTL analysis IL HH1-8-1-2 x 8419 F2 SSR02460 ASM407v2 6 26252541 26252700 NA 0 0 10.1007/s10681-013-0860-z t3659.M001218.1 NA t3659.T000182 Llti1.1 1 low light tolerance, low light tolerance index during the seedling stage QTL analysis M22 x M14 F2:3 ME23EM2 NA NA 0 0 SSR13109 1 1317871 1318082 1.1 13.2 10.4238/2015.September.9.2 NA t3659.M000351.1 t3659.T000183 Llti1.2 1 low light tolerance, low light tolerance index during the seedling stage QTL analysis M22 x M14 F2:3 SSR13109 ASM407v2 1 1317871 1318082 ME1SA18 NA 0 0 1.8 12.7 10.4238/2015.September.9.2 t3659.M000351.1 NA t3659.T000184 Llti2.1 1 low light tolerance, low light tolerance index during the seedling stage QTL analysis M22 x M14 F2:3 ME23GA2 NA NA 0 0 ME4EM4 NA 0 0 1.3 8.9 10.4238/2015.September.9.2 NA NA t3659.T000185 Llti2.2 1 low light tolerance, low light tolerance index during the seedling stage QTL analysis M22 x M14 F2:3 ME1EM8 NA NA 0 0 ME2EM8 NA 0 0 1.9 10.1 10.4238/2015.September.9.2 NA NA t3659.T000186 Llti2.3 1 low light tolerance, low light tolerance index during the seedling stage QTL analysis M22 x M14 F2:3 ME1EM6 NA NA 0 0 ME2EM3 NA 0 0 12.3 7.9 10.4238/2015.September.9.2 NA NA t3659.T000187 Adw2.1 3 aboveground dry weight, weight of aboveground dry plant at seedling stage QTL analysis PI 183967 x 931 RIL SSR12682 ASM407v2 2 21468724 21468881 SSR30665 2 22001444 22001600 13.3 2.5 10.1111/pbr.12331 t3659.M000594.1 t3659.M000587.1 t3659.T000188 Adw5.1 3 aboveground dry weight, weight of aboveground dry plant at seedling stage QTL analysis PI 183967 x 931 RIL SSR15321 ASM407v2 5 17443753 17443915 SSR07711 NA 0 0 141.3 3.37 10.1111/pbr.12331 t3659.M000921.1 t3659.M000902.1 t3659.T000189 Adw6.1 3 aboveground dry weight, weight of aboveground dry plant at seedling stage QTL analysis PI 183967 x 931 RIL CMBR41 NA NA 0 0 CS41 6 15109733 15109902 92.1 3.48 10.1111/pbr.12331 t3659.M090082.1 t3659.M001139.1 t3659.T000190 Afw5.1 3 aboveground fresh weight, weight of aboveground fresh plant at seedling stage QTL analysis PI 183967 x 931 RIL SSR15592 ASM407v2 5 814688 814878 SSR18729 5 13005885 13006047 141.8 2.75 10.1111/pbr.12331 t3659.M089812.1 t3659.M000901.1 t3659.T000191 Cl1.1 4 cotyledon length, cotyledon length at seedling stage QTL analysis PI 183967 x 931 RIL SSR17536 ASM407v2 1 18697516 18697720 SSR06775 NA 0 0 85.7 4.59 10.1111/pbr.12331 t3659.M000434.1 NA t3659.T000192 Cl1.2 4 cotyledon length, cotyledon length at seedling stage QTL analysis PI 183967 x 931 RIL SSR16671 ASM407v2 1 17306730 17306837 SSR02288 1 17557020 17557221 89.5 2.56 10.1111/pbr.12331 t3659.M000426.1 t3659.M000423.1 t3659.T000193 Cl3.1 4 cotyledon length, cotyledon length at seedling stage QTL analysis PI 183967 x 931 RIL SSR23574 ASM407v2 3 27279477 27279687 SSR17264 3 27811206 27811405 115 3.44 10.1111/pbr.12331 t3659.M000103.1 t3659.M000717.1 t3659.T000194 Cl5.1 4 cotyledon length, cotyledon length at seedling stage QTL analysis PI 183967 x 931 RIL SSR23148 ASM407v2 5 16426691 16427370 SSR00182 5 18693136 18693319 149.3 9.21 10.1111/pbr.12331 t3659.M000929.1 t3659.M000183.1 t3659.T000195 Cl5.2 4 cotyledon length, cotyledon length at seedling stage QTL analysis PI 183967 x 931 RIL SSR14436 NA NA 0 0 SSR10542 Scaffold000113 196918 197142 137.7 3.94 10.1111/pbr.12331 NA t3659.M000934.1 t3659.T000196 Cl5.3 4 cotyledon length, cotyledon length at seedling stage QTL analysis PI 183967 x 931 RIL SSR15321 ASM407v2 5 17443753 17443915 SSR07711 NA 0 0 141.3 7.33 10.1111/pbr.12331 t3659.M000921.1 t3659.M000902.1 t3659.T000197 Cl6.1 4 cotyledon length, cotyledon length at seedling stage QTL analysis PI 183967 x 931 RIL SSR18534 ASM407v2 6 16606287 16606469 SSR17591 6 16085704 16085838 102.6 6.54 10.1111/pbr.12331 t3659.M000209.1 t3659.M001412.1 t3659.T000198 Cl6.2 4 cotyledon length, cotyledon length at seedling stage QTL analysis PI 183967 x 931 RIL CMBR41 NA NA 0 0 CS41 6 15109733 15109902 92.1 5.4 10.1111/pbr.12331 t3659.M090082.1 t3659.M001139.1 t3659.T000199 Cl6.3 4 cotyledon length, cotyledon length at seedling stage QTL analysis PI 183967 x 931 RIL SSR10569 NA NA 0 0 SSR23109 6 16028615 16028786 97.7 3.64 10.1111/pbr.12331 NA t3659.M001153.1 t3659.T000200 Cw1.1 4 cotyledon width, cotyledon width at seedling stage QTL analysis PI 183967 x 931 RIL SSR17536 ASM407v2 1 18697516 18697720 SSR06775 NA 0 0 85.7 4.16 10.1111/pbr.12331 t3659.M000434.1 NA t3659.T000201 Cw1.2 4 cotyledon width, cotyledon width at seedling stage QTL analysis PI 183967 x 931 RIL SSR16671 ASM407v2 1 17306730 17306837 SSR02288 1 17557020 17557221 89.5 2.76 10.1111/pbr.12331 t3659.M000426.1 t3659.M000423.1 t3659.T000202 Cw2.1 4 cotyledon width, cotyledon width at seedling stage QTL analysis PI 183967 x 931 RIL SSRCYC082 NA NA 0 0 SSR13275 2 16613633 16613835 66.7 2.54 10.1111/pbr.12331 NA t3659.M000548.1 t3659.T000203 Cw5.1 4 cotyledon width, cotyledon width at seedling stage QTL analysis PI 183967 x 931 RIL SSR23148 ASM407v2 5 16426691 16427370 SSR00182 5 18693136 18693319 149.3 5.45 10.1111/pbr.12331 t3659.M000929.1 t3659.M000183.1 t3659.T000204 Cw5.2 4 cotyledon width, cotyledon width at seedling stage QTL analysis PI 183967 x 931 RIL SSR15592 ASM407v2 5 814688 814878 SSR18729 5 13005885 13006047 141.8 5.05 10.1111/pbr.12331 t3659.M089812.1 t3659.M000901.1 t3659.T000205 Cw5.3 4 cotyledon width, cotyledon width at seedling stage QTL analysis PI 183967 x 931 RIL SSR15321 ASM407v2 5 17443753 17443915 SSR07711 NA 0 0 141.3 3.18 10.1111/pbr.12331 t3659.M000921.1 t3659.M000902.1 t3659.T000206 Cw6.1 4 cotyledon width, cotyledon width at seedling stage QTL analysis PI 183967 x 931 RIL SSR17818 ASM407v2 6 21037249 21037417 SSR10449 NA 0 0 138.9 4.04 10.1111/pbr.12331 t3659.M001187.1 NA t3659.T000207 Cw6.2 4 cotyledon width, cotyledon width at seedling stage QTL analysis PI 183967 x 931 RIL SSR17591 ASM407v2 6 16085704 16085838 CS80 NA 0 0 114.2 4 10.1111/pbr.12331 t3659.M001412.1 NA t3659.T000208 Cw6.3 4 cotyledon width, cotyledon width at seedling stage QTL analysis PI 183967 x 931 RIL SSR15606 NA NA 0 0 SSR11224 NA 0 0 192.2 3.96 10.1111/pbr.12331 t3659.M001230.1 NA t3659.T000209 Fll5.1 4 first true leaf length, longest length of first true leaf at seedling stage QTL analysis PI 183967 x 931 RIL SSR14436 NA NA 0 0 SSR10542 Scaffold000113 196918 197142 137.7 3.41 10.1111/pbr.12331 NA t3659.M000934.1 t3659.T000210 Fll5.2 4 first true leaf length, longest length of first true leaf at seedling stage QTL analysis PI 183967 x 931 RIL SSR15321 ASM407v2 5 17443753 17443915 SSR07711 NA 0 0 141.3 2.5 10.1111/pbr.12331 t3659.M000921.1 t3659.M000902.1 t3659.T000211 Fll6.1 4 first true leaf length, longest length of first true leaf at seedling stage QTL analysis PI 183967 x 931 RIL SSR15606 NA NA 0 0 SSR11224 NA 0 0 192.2 6.18 10.1111/pbr.12331 t3659.M001230.1 NA t3659.T000212 Flw5.1 6 first true leaf width, widest width of first true leaf at seedling stage QTL analysis PI 183967 x 931 RIL SSR15321 ASM407v2 5 17443753 17443915 SSR07711 NA 0 0 141.3 2.76 10.1111/pbr.12331 t3659.M000921.1 t3659.M000902.1 t3659.T000213 Flw6.1 6 first true leaf width, widest width of first true leaf at seedling stage QTL analysis PI 183967 x 931 RIL SSR15606 NA NA 0 0 SSR11224 NA 0 0 192.2 5.34 10.1111/pbr.12331 t3659.M001230.1 NA t3659.T000214 Hl1.1 4 hypocotyl length, hypocotyl length at seedling stage QTL analysis PI 183967 x 931 RIL SSR22826 NA NA 0 0 SSR00262 1 25851586 25851792 114.8 3.23 10.1111/pbr.12331 NA t3659.M000045.1 t3659.T000215 Hl2.1 4 hypocotyl length, hypocotyl length at seedling stage QTL analysis PI 183967 x 931 RIL SSR00030 NA NA 0 0 SSR105222 NA 0 0 50.6 4.52 10.1111/pbr.12331 t3659.M000513.1 NA t3659.T000216 Hl2.2 4 hypocotyl length, hypocotyl length at seedling stage QTL analysis PI 183967 x 931 RIL SSR10522 ASM407v2 2 14670828 14670996 SSRCYC082 NA 0 0 60.6 2.8 10.1111/pbr.12331 t3659.M000082.1 NA t3659.T000217 Hl3.1 4 hypocotyl length, hypocotyl length at seedling stage QTL analysis PI 183967 x 931 RIL SSR12383 ASM407v2 3 4425047 4425232 SSR18541 3 10547978 10548181 34.4 4.54 10.1111/pbr.12331 t3659.M000630.1 t3659.M000657.1 t3659.T000218 Hl3.2 4 hypocotyl length, hypocotyl length at seedling stage QTL analysis PI 183967 x 931 RIL SSR04922 ASM407v2 3 11436456 11436649 SSR01149 NA 0 0 48.8 5 10.1111/pbr.12331 t3659.M000659.1 NA t3659.T000219 Hl3.3 4 hypocotyl length, hypocotyl length at seedling stage QTL analysis PI 183967 x 931 RIL SSR20251 ASM407v2 3 3073720 3073892 SSR31430 NA 0 0 30.5 5.57 10.1111/pbr.12331 t3659.M000621.1 t3659.M000649.1 t3659.T000220 Hl3.4 4 hypocotyl length, hypocotyl length at seedling stage QTL analysis PI 183967 x 931 RIL SSR16713 ASM407v2 3 25348997 25349611 SSR23574 3 27279477 27279687 107.6 4.5 10.1111/pbr.12331 t3659.M089577.1 t3659.M000103.1 t3659.T000221 Hl5.1 4 hypocotyl length, hypocotyl length at seedling stage QTL analysis PI 183967 x 931 RIL SSR23148 ASM407v2 5 16426691 16427370 SSR00182 5 18693136 18693319 149.3 5.45 10.1111/pbr.12331 t3659.M000929.1 t3659.M000183.1 t3659.T000222 Hl5.2 4 hypocotyl length, hypocotyl length at seedling stage QTL analysis PI 183967 x 931 RIL SSR14436 NA NA 0 0 SSR10542 Scaffold000113 196918 197142 137.7 3.6 10.1111/pbr.12331 NA t3659.M000934.1 t3659.T000223 Hl6.1 4 hypocotyl length, hypocotyl length at seedling stage QTL analysis PI 183967 x 931 RIL SSR18289 ASM407v2 6 20851953 20852112 SSR16005 6 21343034 21343218 133.9 4.82 10.1111/pbr.12331 t3659.M001189.1 t3659.M001415.1 t3659.T000224 fd1.1 4 Fruit diameter QTL analysis S94 x S06 F2:3 e24m38a NA NA 0 0 e23m18b NA 0 0 4.3 10.1111/j.1439-0523.2007.01426.x NA NA t3659.T000225 fd1.1 4 Fruit diameter, small spines (ss) locus and dull fruit skin (D) locus (fd6.1) QTL analysis S94 x S06 RIL ss NA NA 0 0 D NA 0 0 36.9 3.06 10.1007/s10681-008-9722-5 NA NA t3659.T000226 fd1.2 4 Fruit diameter, small spines (ss) locus and dull fruit skin (D) locus (fd6.1) QTL analysis S94 x S06 RIL CMBR97 NA NA 0 0 e24m38d NA 0 0 109.3 9.01 10.1007/s10681-008-9722-5 t3659.M089195.1 NA t3659.T000227 fd1.3 4 Fruit diameter QTL analysis S94 x S06 F2:3 OP-AF15b NA NA 0 0 CMBR40 NA 0 0 4.46 10.1111/j.1439-0523.2007.01426.x NA t3659.M089196.1 t3659.T000228 fd2.1 4 Fruit diameter, small spines (ss) locus and dull fruit skin (D) locus (fd6.1) QTL analysis S94 x S06 RIL e24m38c NA NA 0 0 ME23EM6c NA 0 0 113 8.83 10.1007/s10681-008-9722-5 NA NA t3659.T000229 fd2.2 4 Fruit diameter, small spines (ss) locus and dull fruit skin (D) locus (fd6.1) QTL analysis S94 x S06 RIL CSWCT25 ASM407v2 6 25739776 25740132 m44EM4b NA 0 0 0 5.17 10.1007/s10681-008-9722-5 t3659.M000006.1 NA t3659.T000230 fd4.1 4 Fruit diameter, small spines (ss) locus and dull fruit skin (D) locus (fd6.1) QTL analysis S94 x S06 RIL CSWCT25 ASM407v2 6 25739776 25740132 m44EM4b NA 0 0 2 3.67 10.1007/s10681-008-9722-5 t3659.M000006.1 NA t3659.T000231 fd5.1 4 Fruit diameter, small spines (ss) locus and dull fruit skin (D) locus (fd6.1) QTL analysis S94 x S06 RIL ME23SA7 NA NA 0 0 e18msp25C NA 0 0 86.1 2.98 10.1007/s10681-008-9722-5 NA NA t3659.T000232 fd6.1 4 Fruit diameter, small spines (ss) locus and dull fruit skin (D) locus (fd6.1) QTL analysis S94 x S06 RIL ME11EM9c NA NA 0 0 ME11EM9b NA 0 0 41.2 3.01 10.1007/s10681-008-9722-5 NA NA t3659.T000233 fd6.2 4 Fruit diameter, small spines (ss) locus and dull fruit skin (D) locus (fd6.1) QTL analysis S94 x S06 RIL ME11GA2c NA NA 0 0 AK5SCAR NA 0 0 16.3 3.98 10.1007/s10681-008-9722-5 NA NA t3659.T000234 fffn1.1 6 First female flower node, gynoecious (F) locus (fffn2.1) QTL analysis S94 x S06 RIL e24m38d NA NA 0 0 e24m38c NA 0 0 112.6 15.11 10.1007/s10681-008-9722-5 NA NA t3659.T000235 fffn1.1 6 First female flower node, gynoecious (F) locus (fffn2.1) QTL analysis S94 x S06 RIL PM8EM5c NA NA 0 0 ME23EM14c NA 0 0 0 4.78 10.1007/s10681-008-9722-5 NA NA t3659.T000236 fffn2.1 6 First female flower node, gynoecious (F) locus (fffn2.1) QTL analysis S94 x S06 RIL e24m38d NA NA 0 0 e24m38c NA 0 0 111.6 7.26 10.1007/s10681-008-9722-5 NA NA t3659.T000237 fffn2.2 6 First female flower node, gynoecious (F) locus (fffn2.1) QTL analysis S94 x S06 RIL F NA NA 0 0 CS30 NA 0 0 9.5 26.65 10.1007/s10681-008-9722-5 t3659.M090176.1 t3659.M090170.1 t3659.T000238 fffn3.1 6 First female flower node, gynoecious (F) locus (fffn2.1) QTL analysis S94 x S06 RIL S94A1 ASM407v2 6 24246562 24246857 F NA 0 0 9.2 20.08 10.1007/s10681-008-9722-5 t3659.M090180.1 t3659.M090176.1 t3659.T000239 fffn5.1 6 First female flower node, gynoecious (F) locus (fffn2.1) QTL analysis S94 x S06 RIL PM8SA4c NA NA 0 0 e7m18b NA 0 0 90.7 7.1 10.1007/s10681-008-9722-5 NA NA t3659.T000240 fffn5.2 6 First female flower node, gynoecious (F) locus (fffn2.1) QTL analysis S94 x S06 RIL e23m18b NA NA 0 0 PM8GA2a NA 0 0 39.4 2.9 10.1007/s10681-008-9722-5 NA NA t3659.T000241 ffn1.1 6 First flower node, gynoecious (F) locus (ffn2.1) QTL analysis S94 x S06 RIL e6m33c NA NA 0 0 e6m33b NA 0 0 5.9 28.42 10.1007/s10681-008-9722-5 NA NA t3659.T000242 ffn1.1 6 First flower node, gynoecious (F) locus (ffn2.1) QTL analysis S94 x S06 RIL ME8EM14 NA NA 0 0 BC526SCAR NA 0 0 127.6 2.94 10.1007/s10681-008-9722-5 NA NA t3659.T000243 ffn1.2 6 First flower node, gynoecious (F) locus (ffn2.1) QTL analysis S94 x S06 RIL ME4EM8b NA NA 0 0 ME4EM8a NA 0 0 54.4 3.47 10.1007/s10681-008-9722-5 NA NA t3659.T000244 ffn1.3 6 First flower node, gynoecious (F) locus (ffn2.1) QTL analysis S94 x S06 RIL ME3EM2b NA NA 0 0 ME3EM2c NA 0 0 128.8 4.71 10.1007/s10681-008-9722-5 NA NA t3659.T000245 ffn2.1 6 First flower node, gynoecious (F) locus (ffn2.1) QTL analysis S94 x S06 RIL S94A1 ASM407v2 6 24246562 24246857 F NA 0 0 8.2 30.04 10.1007/s10681-008-9722-5 t3659.M090180.1 t3659.M090176.1 t3659.T000246 ffn2.2 6 First flower node, gynoecious (F) locus (ffn2.1) QTL analysis S94 x S06 RIL F NA NA 0 0 CS30 NA 0 0 9.5 11.19 10.1007/s10681-008-9722-5 t3659.M090176.1 t3659.M090170.1 t3659.T000247 ffn6.1 6 First flower node, gynoecious (F) locus (ffn2.1) QTL analysis S94 x S06 RIL ME23SA4c NA NA 0 0 CMBR41 NA 0 0 58.3 4.11 10.1007/s10681-008-9722-5 NA t3659.M090082.1 t3659.T000248 ffn6.2 6 First flower node, gynoecious (F) locus (ffn2.1) QTL analysis S94 x S06 RIL e24m38a NA NA 0 0 e24m38b NA 0 0 0 3.3 10.1007/s10681-008-9722-5 NA NA t3659.T000249 fft1.1 6 Fruit flesh thickness QTL analysis S94 x S06 F2:3 e24m38a NA NA 0 0 e23m18b NA 0 0 9.52 10.1111/j.1439-0523.2007.01426.x NA NA t3659.T000250 fft1.1 6 Fruit flesh thickness, gynoecious (F) locus (fft2.1) QTL analysis S94 x S06 RIL PM8EM7 NA NA 0 0 ME7EM3 NA 0 0 54.1 2.91 10.1007/s10681-008-9722-5 NA NA t3659.T000251 fft1.1 6 Fruit flesh thickness, gynoecious (F) locus (fft2.1) QTL analysis S94 x S06 RIL ME11SA18c NA NA 0 0 ME11SA18b NA 0 0 19.5 5.53 10.1007/s10681-008-9722-5 NA NA t3659.T000252 fft1.2 6 Fruit flesh thickness, gynoecious (F) locus (fft2.1) QTL analysis S94 x S06 RIL e24m38d NA NA 0 0 e24m38c NA 0 0 112.6 13.85 10.1007/s10681-008-9722-5 NA NA t3659.T000253 fft2.1 6 Fruit flesh thickness, gynoecious (F) locus (fft2.1) QTL analysis S94 x S06 RIL e24m38c NA NA 0 0 ME23EM6c NA 0 0 114 8.45 10.1007/s10681-008-9722-5 NA NA t3659.T000254 fft2.1 6 Fruit flesh thickness QTL analysis S94 x S06 F2:3 ME1EM6 NA NA 0 0 CMBR41 NA 0 0 3.41 10.1111/j.1439-0523.2007.01426.x NA t3659.M090082.1 t3659.T000255 fft2.2 6 Fruit flesh thickness, gynoecious (F) locus (fft2.1) QTL analysis S94 x S06 RIL F NA NA 0 0 CS30 NA 0 0 11.5 2.86 10.1007/s10681-008-9722-5 t3659.M090176.1 t3659.M090170.1 t3659.T000256 fft2.3 6 Fruit flesh thickness, gynoecious (F) locus (fft2.1) QTL analysis S94 x S06 RIL ME23SA4c NA NA 0 0 CMBR41 NA 0 0 60.3 4.39 10.1007/s10681-008-9722-5 NA t3659.M090082.1 t3659.T000257 fft3.1 6 Fruit flesh thickness, gynoecious (F) locus (fft2.1) QTL analysis S94 x S06 RIL e18msp24b-B-5-BE-L NA NA 0 0 NA 0 0 62.1 3.42 10.1007/s10681-008-9722-5 NA NA t3659.T000258 fft5.1 6 Fruit flesh thickness, gynoecious (F) locus (fft2.1) QTL analysis S94 x S06 RIL PM8SA4c NA NA 0 0 e7m18b NA 0 0 89.7 3.45 10.1007/s10681-008-9722-5 NA NA t3659.T000259 fft6.1 6 Fruit flesh thickness QTL analysis S94 x S06 F2:3 CSWTA04 ASM407v2 5 3710857 3711102 e6m42 NA 0 0 3.91 10.1111/j.1439-0523.2007.01426.x t3659.M000905.1 NA t3659.T000260 fl2.1 4 Fruit length QTL analysis S94 x S06 F2:3 F NA NA 0 0 CSWCT25 6 25739776 25740132 5.09 10.1111/j.1439-0523.2007.01426.x t3659.M090176.1 t3659.M000006.1 t3659.T000261 fl2.1 4 Fruit length QTL analysis S94 x S06 F2:3 ISSR828 NA NA 0 0 ME4SA4b NA 0 0 7.47 10.1111/j.1439-0523.2007.01426.x NA NA t3659.T000262 fl2.1 4 Fruit length QTL analysis S94 x S06 RIL ME23EM14b NA NA 0 0 PM8EM5b NA 0 0 4.8 6.33 10.1007/s10681-008-9722-5 NA NA t3659.T000263 fl2.1 4 Fruit length QTL analysis S94 x S06 RIL ME22SA4a NA NA 0 0 ME11EM4a NA 0 0 183.2 2.96 10.1007/s10681-008-9722-5 NA NA t3659.T000264 fl2.1 4 Fruit length QTL analysis S94 x S06 RIL PM8EM1a NA NA 0 0 CSWTA11B NA 0 0 17.8 3.42 10.1007/s10681-008-9722-5 NA t3659.M001516.1 t3659.T000265 fl3.1 4 Fruit length QTL analysis S94 x S06 RIL CSWCT25 ASM407v2 6 25739776 25740132 m44EM4b NA 0 0 1 9.18 10.1007/s10681-008-9722-5 t3659.M000006.1 NA t3659.T000266 fl4.1 4 Fruit length QTL analysis S94 x S06 F2:3 F NA NA 0 0 CSWCT25 6 25739776 25740132 4.34 10.1111/j.1439-0523.2007.01426.x t3659.M090176.1 t3659.M000006.1 t3659.T000267 fl4.1 4 Fruit length QTL analysis S94 x S06 RIL Ecol8msp24a NA NA 0 0 e25m18a NA 0 0 123.6 5.57 10.1007/s10681-008-9722-5 NA NA t3659.T000268 fl4.2 4 Fruit length QTL analysis S94 x S06 F2:3 e20m38b NA NA 0 0 S-AB14 NA 0 0 6.06 10.1111/j.1439-0523.2007.01426.x NA NA t3659.T000269 fl4.3 4 Fruit length QTL analysis S94 x S06 F2:3 S-AU18-1 NA NA 0 0 e26m33 NA 0 0 8.69 10.1111/j.1439-0523.2007.01426.x NA NA t3659.T000270 fl4.4 4 Fruit length QTL analysis S94 x S06 F2 ME4SA4b NA NA 0 0 e8msp24b NA 0 0 3.81 10.1111/j.1439-0523.2007.01426.x NA NA t3659.T000271 fl4.5 4 Fruit length QTL analysis S94 x S06 F2:3 e11m42c NA NA 0 0 ME11EM9b NA 0 0 5 10.1111/j.1439-0523.2007.01426.x NA NA t3659.T000272 fl5.1 4 Fruit length QTL analysis S94 x S06 RIL e23m18c NA NA 0 0 CS08 2 1726786 1726965 123.9 4.76 10.1007/s10681-008-9722-5 NA t3659.M089322.1 t3659.T000273 fl5.2 4 Fruit length QTL analysis S94 x S06 RIL ME5GA18e NA NA 0 0 ME11EM4d NA 0 0 53.7 19.77 10.1007/s10681-008-9722-5 NA NA t3659.T000274 fl6.1 4 Fruit length QTL analysis S94 x S06 RIL ME11EM5 NA NA 0 0 ME22EM14a NA 0 0 65.8 10.75 10.1007/s10681-008-9722-5 NA NA t3659.T000275 fl7.1 4 Fruit length QTL analysis S94 x S06 RIL ME23EM14b NA NA 0 0 PM8EM5b NA 0 0 4.8 9.29 10.1007/s10681-008-9722-5 NA NA t3659.T000276 fpl1.1 6 Fruit pedicel length, gynoecious (F) locus (fpl2.1), small spines (ss) locus and dull fruit skin (D) locus (fpl6.1) QTL analysis S94 x S06 RIL e24m38c NA NA 0 0 ME23EM6c NA 0 0 113 4.97 10.1007/s10681-008-9722-5 NA NA t3659.T000277 fpl1.1 6 Fruit pedicel length, gynoecious (F) locus (fpl2.1), small spines (ss) locus and dull fruit skin (D) locus (fpl6.1) QTL analysis S94 x S06 RIL ss NA NA 0 0 D NA 0 0 42.9 7.56 10.1007/s10681-008-9722-5 NA NA t3659.T000278 fpl2.1 6 Fruit pedicel length QTL analysis S94 x S06 F2:3 ME1EM6 NA NA 0 0 CMBR41 NA 0 0 7.77 10.1111/j.1439-0523.2007.01426.x NA t3659.M090082.1 t3659.T000279 fpl2.2 6 Fruit pedicel length QTL analysis S94 x S06 F2:3 F NA NA 0 0 CSWCT25 6 25739776 25740132 3.71 10.1111/j.1439-0523.2007.01426.x t3659.M090176.1 t3659.M000006.1 t3659.T000280 fpl2.3 6 Fruit pedicel length QTL analysis S94 x S06 F2 OP-D18 NA NA 0 0 S94A1 6 24246562 24246857 4 10.1111/j.1439-0523.2007.01426.x NA t3659.M090180.1 t3659.T000281 fpl5.1 6 Fruit pedicel length, gynoecious (F) locus (fpl2.1), small spines (ss) locus and dull fruit skin (D) locus (fpl6.1) QTL analysis S94 x S06 RIL ME9EM4b NA NA 0 0 BC403SCAR 6 13946405 13947187 63.4 3.18 10.1007/s10681-008-9722-5 NA t3659.M090099.1 t3659.T000282 fpl5.2 6 Fruit pedicel length, gynoecious (F) locus (fpl2.1), small spines (ss) locus and dull fruit skin (D) locus (fpl6.1) QTL analysis S94 x S06 RIL ME10SA17b NA NA 0 0 ME1SA18a NA 0 0 59 3.41 10.1007/s10681-008-9722-5 NA NA t3659.T000283 fpl6.1 6 Fruit pedicel length, gynoecious (F) locus (fpl2.1), small spines (ss) locus and dull fruit skin (D) locus (fpl6.1) QTL analysis S94 x S06 RIL ME6EM5a NA NA 0 0 L19SCAR 3 30723090 30724029 118.2 5.15 10.1007/s10681-008-9722-5 NA t3659.M089610.1 t3659.T000284 fsl2.1 6 Fruit stalk length, small spines (ss) locus and dull fruit skin (D) locus (fsl6.1) QTL analysis S94 x S06 RIL CSWCT25 ASM407v2 6 25739776 25740132 m44EM4b NA 0 0 0 4 10.1007/s10681-008-9722-5 t3659.M000006.1 NA t3659.T000285 fsl2.1 6 Fruit stalk length, small spines (ss) locus and dull fruit skin (D) locus (fsl6.1) QTL analysis S94 x S06 RIL ME23EM14b NA NA 0 0 PM8EM5b NA 0 0 4.8 6.92 10.1007/s10681-008-9722-5 NA NA t3659.T000286 fsl2.1 6 Fruit stalk length, small spines (ss) locus and dull fruit skin (D) locus (fsl6.1) QTL analysis S94 x S06 RIL ME22SA4a NA NA 0 0 ME11EM4a NA 0 0 184.2 4.17 10.1007/s10681-008-9722-5 NA NA t3659.T000287 fsl2.2 6 Fruit stalk length, small spines (ss) locus and dull fruit skin (D) locus (fsl6.1) QTL analysis S94 x S06 RIL CSWCT25 ASM407v2 6 25739776 25740132 m44EM4b NA 0 0 0 5.6 10.1007/s10681-008-9722-5 t3659.M000006.1 NA t3659.T000288 fsl4.1 6 Fruit stalk length, small spines (ss) locus and dull fruit skin (D) locus (fsl6.1) QTL analysis S94 x S06 RIL BC403SCAR ASM407v2 6 13946405 13947187 BC523SCAR NA 0 0 64.3 3.12 10.1007/s10681-008-9722-5 t3659.M090099.1 t3659.M000261.1 t3659.T000289 fsl4.1 6 Fruit-stalk length QTL analysis S94 x S06 F2 e10msp14 NA NA 0 0 OP-L12 NA 0 0 6.57 10.1111/j.1439-0523.2007.01426.x NA NA t3659.T000290 fsl4.2 6 Fruit-stalk length QTL analysis S94 x S06 F2:3 S-AU18-1 NA NA 0 0 e26m33 NA 0 0 9.42 10.1111/j.1439-0523.2007.01426.x NA NA t3659.T000291 fsl4.3 6 Fruit-stalk length QTL analysis S94 x S06 F2:3 OP-AA9 NA NA 0 0 ME10EM6 NA 0 0 12.61 10.1111/j.1439-0523.2007.01426.x NA NA t3659.T000292 fsl5.1 6 Fruit stalk length, small spines (ss) locus and dull fruit skin (D) locus (fsl6.1) QTL analysis S94 x S06 RIL ME5GA18e NA NA 0 0 ME11EM4d NA 0 0 52.7 11.91 10.1007/s10681-008-9722-5 NA NA t3659.T000293 fsl6.1 6 Fruit stalk length, small spines (ss) locus and dull fruit skin (D) locus (fsl6.1) QTL analysis S94 x S06 RIL ME11EM5 NA NA 0 0 ME22EM14a NA 0 0 64.8 19.84 10.1007/s10681-008-9722-5 NA NA t3659.T000294 fsl6.2 6 Fruit stalk length, small spines (ss) locus and dull fruit skin (D) locus (fsl6.1) QTL analysis S94 x S06 RIL ME23EM14b NA NA 0 0 PM8EM5b NA 0 0 4.8 11.91 10.1007/s10681-008-9722-5 NA NA t3659.T000295 fw1.1 5 Fruit weight QTL analysis S94 x S06 RIL e24m38d NA NA 0 0 e24m38c NA 0 0 111.6 2.96 10.1007/s10681-008-9722-5 NA NA t3659.T000296 fw1.1 5 Fruit weight QTL analysis S94 x S06 RIL ME5GA18e NA NA 0 0 ME11EM4d NA 0 0 53.7 7.54 10.1007/s10681-008-9722-5 NA NA t3659.T000297 fw1.1 5 Fruit weight QTL analysis S94 x S06 RIL ME23EM14b NA NA 0 0 PM8EM5b NA 0 0 4.8 7.09 10.1007/s10681-008-9722-5 NA NA t3659.T000298 fw2.1 5 Fruit weight QTL analysis S94 x S06 RIL CSWCT25 ASM407v2 6 25739776 25740132 m44EM4b NA 0 0 1 10.18 10.1007/s10681-008-9722-5 t3659.M000006.1 NA t3659.T000299 fw2.1 5 Fruit weight QTL analysis S94 x S06 F2:3 ME4SA4b NA NA 0 0 e8msp24b NA 0 0 4.91 10.1111/j.1439-0523.2007.01426.x NA NA t3659.T000300 fw3.1 5 Fruit weight QTL analysis S94 x S06 RIL CSWCT25 ASM407v2 6 25739776 25740132 m44EM4b NA 0 0 2 9.55 10.1007/s10681-008-9722-5 t3659.M000006.1 NA t3659.T000301 fw4.1 5 Fruit weight QTL analysis S94 x S06 F2:3 CSEPGN11 ASM407v2 6 23781323 23781473 F NA 0 0 5 10.1111/j.1439-0523.2007.01426.x t3659.M090172.1 t3659.M090176.1 t3659.T000302 fw4.1 5 Fruit weight QTL analysis S94 x S06 RIL e23m18c NA NA 0 0 CS08 2 1726786 1726965 123.9 6.96 10.1007/s10681-008-9722-5 NA t3659.M089322.1 t3659.T000303 fw4.2 5 Fruit weight QTL analysis S94 x S06 F2:3 e20m38b NA NA 0 0 S-AB14 NA 0 0 4.9 10.1111/j.1439-0523.2007.01426.x NA NA t3659.T000304 fw4.3 5 Fruit weight QTL analysis S94 x S06 F2:3 S-AU18-1 NA NA 0 0 e26m33 NA 0 0 11.36 10.1111/j.1439-0523.2007.01426.x NA NA t3659.T000305 fw5.1 5 Fruit weight QTL analysis S94 x S06 RIL ME5GA18e NA NA 0 0 ME11EM4d NA 0 0 53.7 6.8 10.1007/s10681-008-9722-5 NA NA t3659.T000306 ldr2.1 4 Fruit length/diameter ratio QTL analysis S94 x S06 F2 OP-D18 NA NA 0 0 S94A1 6 24246562 24246857 6.02 10.1111/j.1439-0523.2007.01426.x NA t3659.M090180.1 t3659.T000307 ldr2.1 4 Fruit length/diameter ratio QTL analysis S94 x S06 RIL ME23EM14b NA NA 0 0 PM8EM5b NA 0 0 4.8 7.62 10.1007/s10681-008-9722-5 NA NA t3659.T000308 ldr2.1 4 Fruit length/diameter ratio QTL analysis S94 x S06 RIL CSWTA11B NA NA 0 0 ME9EM4a NA 0 0 27.4 4.89 10.1007/s10681-008-9722-5 t3659.M001516.1 NA t3659.T000309 ldr2.2 4 Fruit length/diameter ratio QTL analysis S94 x S06 F2:3 OP-AQ3 NA NA 0 0 OP-D18 NA 0 0 3.27 10.1111/j.1439-0523.2007.01426.x NA NA t3659.T000310 ldr2.2 4 Fruit length/diameter ratio QTL analysis S94 x S06 F2:3 ME11EM5a NA NA 0 0 ME4EM5b NA 0 0 4.1 10.1111/j.1439-0523.2007.01426.x NA NA t3659.T000311 ldr3.1 4 Fruit length/diameter ratio QTL analysis S94 x S06 RIL CSWCT25 ASM407v2 6 25739776 25740132 m44EM4b NA 0 0 1 3.75 10.1007/s10681-008-9722-5 t3659.M000006.1 NA t3659.T000312 ldr4.1 4 Fruit length/diameter ratio QTL analysis S94 x S06 RIL e25m18a NA NA 0 0 CS08 2 1726786 1726965 123.9 4.06 10.1007/s10681-008-9722-5 NA t3659.M089322.1 t3659.T000313 ldr4.1 4 Fruit length/diameter ratio QTL analysis S94 x S06 F2:3 ME4SA4b NA NA 0 0 e8msp24b NA 0 0 14.32 10.1111/j.1439-0523.2007.01426.x NA NA t3659.T000314 ldr4.2 4 Fruit length/diameter ratio QTL analysis S94 x S06 F2:3 ME4SA4b NA NA 0 0 e8msp24b NA 0 0 7.85 10.1111/j.1439-0523.2007.01426.x NA NA t3659.T000315 ldr4.3 4 Fruit length/diameter ratio QTL analysis S94 x S06 F2:3 e20m38b NA NA 0 0 S-AB14 NA 0 0 5.5 10.1111/j.1439-0523.2007.01426.x NA NA t3659.T000316 ldr5.1 4 Fruit length/diameter ratio QTL analysis S94 x S06 RIL Ecol8msp24a NA NA 0 0 e25m18a NA 0 0 122.6 6.74 10.1007/s10681-008-9722-5 NA NA t3659.T000317 ldr5.1 4 Fruit length/diameter ratio QTL analysis S94 x S06 F2:3 S-AU18-1 NA NA 0 0 e26m33 NA 0 0 5.9 10.1111/j.1439-0523.2007.01426.x NA NA t3659.T000318 ldr5.2 4 Fruit length/diameter ratio QTL analysis S94 x S06 RIL ME5GA18e NA NA 0 0 ME11EM4d NA 0 0 52.7 13.82 10.1007/s10681-008-9722-5 NA NA t3659.T000319 ldr7.1 4 Fruit length/diameter ratio QTL analysis S94 x S06 RIL ME11EM5 NA NA 0 0 ME22EM14a NA 0 0 65.8 10.45 10.1007/s10681-008-9722-5 NA NA t3659.T000320 ldr7.2 4 Fruit length/diameter ratio QTL analysis S94 x S06 RIL ME23EM14b NA NA 0 0 PM8EM5b NA 0 0 4.8 10.32 10.1007/s10681-008-9722-5 NA NA t3659.T000321 lsr1.1 4 Fruit length/stalk ratio, uniform immature fruit color (u) locus (lsr6.1) QTL analysis S94 x S06 RIL S_S13_2 NA NA 0 0 e23m18d NA 0 0 79.3 4.04 10.1007/s10681-008-9722-5 NA NA t3659.T000322 lsr1.1 4 Fruit length/stalk ratio, uniform immature fruit color (u) locus (lsr6.1) QTL analysis S94 x S06 RIL TELODC1 NA NA 0 0 ME8EM14 NA 0 0 123.7 4.67 10.1007/s10681-008-9722-5 NA NA t3659.T000323 lsr2.1 4 Fruit length/stalk ratio QTL analysis S94 x S06 F2:3 ME23EM6 NA NA 0 0 S_AV16_3 NA 0 0 5.02 10.1111/j.1439-0523.2007.01426.x NA NA t3659.T000324 lsr4.1 4 Fruit length/stalk ratio, uniform immature fruit color (u) locus (lsr6.1) QTL analysis S94 x S06 RIL BC523SCAR NA NA 0 0 ME9EM6b NA 0 0 76.1 5.29 10.1007/s10681-008-9722-5 t3659.M000261.1 NA t3659.T000325 lsr4.1 4 Fruit length/stalk ratio QTL analysis S94 x S06 F2 e10msp14 NA NA 0 0 OP-L12 NA 0 0 4.82 10.1111/j.1439-0523.2007.01426.x NA NA t3659.T000326 lsr4.2 4 Fruit length/stalk ratio QTL analysis S94 x S06 F2:3 S-AU18-1 NA NA 0 0 e26m33 NA 0 0 3.31 10.1111/j.1439-0523.2007.01426.x NA NA t3659.T000327 lsr4.3 4 Fruit length/stalk ratio QTL analysis S94 x S06 F2:3 OP-AA9 NA NA 0 0 ME10EM6 NA 0 0 4.81 10.1111/j.1439-0523.2007.01426.x NA NA t3659.T000328 lsr5.1 4 Fruit length/stalk ratio, uniform immature fruit color (u) locus (lsr6.1) QTL analysis S94 x S06 RIL ME5GA18e NA NA 0 0 ME11EM4d NA 0 0 54.7 7.32 10.1007/s10681-008-9722-5 NA NA t3659.T000329 lsr5.2 4 Fruit length/stalk ratio, uniform immature fruit color (u) locus (lsr6.1) QTL analysis S94 x S06 RIL ME23EM14b NA NA 0 0 PM8EM5b NA 0 0 4.8 6.89 10.1007/s10681-008-9722-5 NA NA t3659.T000330 lsr6.1 4 Fruit length/stalk ratio, uniform immature fruit color (u) locus (lsr6.1) QTL analysis S94 x S06 RIL ME6EM5b NA NA 0 0 ME6EM5a NA 0 0 111.2 5.06 10.1007/s10681-008-9722-5 NA NA t3659.T000331 lsr6.1 4 Fruit length/stalk ratio QTL analysis S94 x S06 F2:3 e11m42a NA NA 0 0 e7m18a NA 0 0 7.49 10.1111/j.1439-0523.2007.01426.x NA NA t3659.T000332 lsr6.2 4 Fruit length/stalk ratio, uniform immature fruit color (u) locus (lsr6.1) QTL analysis S94 x S06 RIL ME6EM5b NA NA 0 0 ME6EM5a NA 0 0 111.2 3.17 10.1007/s10681-008-9722-5 NA NA t3659.T000333 lsr6.3 4 Fruit length/stalk ratio, uniform immature fruit color (u) locus (lsr6.1) QTL analysis S94 x S06 RIL u NA NA 0 0 ME23EM4 NA 0 0 46.2 7.61 10.1007/s10681-008-9722-5 NA NA t3659.T000334 lsr6.4 4 Fruit length/stalk ratio, uniform immature fruit color (u) locus (lsr6.1) QTL analysis S94 x S06 RIL u NA NA 0 0 ME23EM4 NA 0 0 49.2 3.55 10.1007/s10681-008-9722-5 NA NA t3659.T000335 qINL-1 4 INL, internode length QTL analysis S94 x S06 F2:3 e24m38a NA NA 0 0 CMBR40 NA 0 0 163.6 10.1270/jsbbs.58.453 NA t3659.M089196.1 t3659.T000336 qINL-3 4 INL, internode length QTL analysis S94 x S06 F2:3 OP_Q1 NA NA 0 0 ME11EM4b NA 0 0 61.4 10.1270/jsbbs.58.453 NA NA t3659.T000337 qLBN-1 4 LBN, lateral branch number QTL analysis S94 x S06 F2:3 OP_AF15b NA NA 0 0 e11m42d NA 0 0 181.4 10.1270/jsbbs.58.453 NA NA t3659.T000338 qLBN-2 4 LBN, lateral branch number QTL analysis S94 x S06 F2:3 CSEPGN11 ASM407v2 6 23781323 23781473 OP_D18 NA 0 0 33 10.1270/jsbbs.58.453 t3659.M090172.1 NA t3659.T000339 qLBN-6 4 LBN, lateral branch number QTL analysis S94 x S06 F2:3 e6m42 NA NA 0 0 CSWTA04 5 3710857 3711102 98.5 10.1270/jsbbs.58.453 NA t3659.M000905.1 t3659.T000340 qLBTL-1 6 LBTL, lateral branch length QTL analysis S94 x S06 F2:3 OP_AF15b NA NA 0 0 e11m42d NA 0 0 181.4 10.1270/jsbbs.58.453 NA NA t3659.T000341 qLBTL-2 6 LBTL, lateral branch length QTL analysis S94 x S06 F2:3 ME2EM14 NA NA 0 0 CS30 NA 0 0 15.1 10.1270/jsbbs.58.453 NA t3659.M090170.1 t3659.T000342 qMSD-1 4 MSD, main-stem diameter QTL analysis S94 x S06 F2:3 OP_V20 NA NA 0 0 CSFR12 1 1093952 1094237 196.6 10.1270/jsbbs.58.453 NA t3659.M089171.1 t3659.T000343 qMSD-7 4 MSD, main-stem diameter QTL analysis S94 x S06 F2:3 e23M15b NA NA 0 0 e23M15a NA 0 0 20.5 10.1270/jsbbs.58.453 NA NA t3659.T000344 qMSL-2 4 MSL, main-stem length QTL analysis S94 x S06 F2:3 CSEPGN11 ASM407v2 6 23781323 23781473 OP_D18 NA 0 0 36 10.1270/jsbbs.58.453 t3659.M090172.1 NA t3659.T000345 qMSL-3 4 MSL, main-stem length QTL analysis S94 x S06 F2:3 CS8 NA NA 0 0 OP_M20b NA 0 0 142.6 10.1270/jsbbs.58.453 NA NA t3659.T000346 qMSL-5 4 MSL, main-stem length QTL analysis S94 x S06 F2:3 ME10EM5b NA NA 0 0 ME11EM9d NA 0 0 74.5 10.1270/jsbbs.58.453 NA NA t3659.T000347 qPL-2 6 PL, petiole length QTL analysis S94 x S06 F2:3 ME5GA18e NA NA 0 0 S_AV14 NA 0 0 87.8 10.1270/jsbbs.58.453 NA t3659.M090093.1 t3659.T000348 qPL-6 6 PL, petiole length QTL analysis S94 x S06 F2:3 P14SCAR NA NA 0 0 ME21EM9a NA 0 0 12.5 10.1270/jsbbs.58.453 t3659.M089815.1 NA t3659.T000349 scd1.1 4 Seed cavity diameter, uniform immature fruit color (u) locus (scd6.1) QTL analysis S94 x S06 RIL e17m18a NA NA 0 0 PM8EM1b NA 0 0 60.9 3.41 10.1007/s10681-008-9722-5 NA NA t3659.T000350 scd1.1 4 Seed-cavity diameter QTL analysis S94 x S06 F2:3 ME11EM9e NA NA 0 0 ME11EM9d NA 0 0 3.91 10.1111/j.1439-0523.2007.01426.x NA NA t3659.T000351 scd1.1 4 Seed cavity diameter, uniform immature fruit color (u) locus (scd6.1) QTL analysis S94 x S06 RIL ME11EM8e NA NA 0 0 ME21EM9b NA 0 0 109.6 3.04 10.1007/s10681-008-9722-5 NA NA t3659.T000352 scd1.2 4 Seed cavity diameter, uniform immature fruit color (u) locus (scd6.1) QTL analysis S94 x S06 RIL e24m38d NA NA 0 0 e24m38c NA 0 0 111.6 5.22 10.1007/s10681-008-9722-5 NA NA t3659.T000353 scd3.1 4 Seed cavity diameter, uniform immature fruit color (u) locus (scd6.1) QTL analysis S94 x S06 RIL ME1SA4h NA NA 0 0 ME22SA4e NA 0 0 98.4 2.89 10.1007/s10681-008-9722-5 NA NA t3659.T000354 scd3.2 4 Seed cavity diameter, uniform immature fruit color (u) locus (scd6.1) QTL analysis S94 x S06 RIL e23m18c NA NA 0 0 CS08 2 1726786 1726965 123.9 3.92 10.1007/s10681-008-9722-5 NA t3659.M089322.1 t3659.T000355 scd4.1 4 Seed cavity diameter, uniform immature fruit color (u) locus (scd6.1) QTL analysis S94 x S06 RIL ME5GA18e NA NA 0 0 ME11EM4d NA 0 0 53.7 3.48 10.1007/s10681-008-9722-5 NA NA t3659.T000356 scd5.1 4 Seed-cavity diameter QTL analysis S94 x S06 F2:3 OP-X8b NA NA 0 0 ME5OD17 NA 0 0 3.25 10.1111/j.1439-0523.2007.01426.x NA NA t3659.T000357 scd6.1 4 Seed cavity diameter, uniform immature fruit color (u) locus (scd6.1) QTL analysis S94 x S06 RIL ME23EM4 NA NA 0 0 ME5GA18a NA 0 0 54 6.86 10.1007/s10681-008-9722-5 NA NA t3659.T000358 scd6.2 4 Seed cavity diameter, uniform immature fruit color (u) locus (scd6.1) QTL analysis S94 x S06 RIL u NA NA 0 0 ME23EM4 NA 0 0 50.2 7.26 10.1007/s10681-008-9722-5 NA NA t3659.T000359 sex2.1 6 Female flower ratio, gynoecious (F) locus (sex2.1), small spines (ss) locus (sex6.1) QTL analysis S94 x S06 RIL S94A1 ASM407v2 6 24246562 24246857 F NA 0 0 9.2 72.94 10.1007/s10681-008-9722-5 t3659.M090180.1 t3659.M090176.1 t3659.T000360 sex2.1 6 Female flower ratio, gynoecious (F) locus (sex2.1), small spines (ss) locus (sex6.1) QTL analysis S94 x S06 RIL CS15 ASM407v2 5 26322919 26323069 ss NA 0 0 35.3 6.56 10.1007/s10681-008-9722-5 t3659.M089984.1 NA t3659.T000361 sex2.2 6 Female flower ratio, gynoecious (F) locus (sex2.1), small spines (ss) locus (sex6.1) QTL analysis S94 x S06 RIL F NA NA 0 0 CS30 NA 0 0 10.5 84.44 10.1007/s10681-008-9722-5 t3659.M090176.1 t3659.M090170.1 t3659.T000362 sex6.1 6 Female flower ratio, gynoecious (F) locus (sex2.1), small spines (ss) locus (sex6.1) QTL analysis S94 x S06 RIL e7m18b NA NA 0 0 S_AV16_3 NA 0 0 92.6 4.47 10.1007/s10681-008-9722-5 NA NA t3659.T000363 1 powdery mildew resistance QTL analysis Santou x PI197088-1 RIL,F7 EAACMCTA100 NA NA 0 0 NA 0 0 63.3 4.18 10.1007/s00122-005-0121-1 NA NA t3659.T000364 1 powdery mildew resistance QTL analysis Santou x PI197088-1 RIL,F7 EAACMCAC391-395STS ASM407v2 1 15547278 15547849 NA 0 0 40.1 12.99 10.1007/s00122-005-0121-1 t3659.M000051.1 NA t3659.T000365 1 powdery mildew resistance QTL analysis Santou x PI197088-1 RIL,F7 EAAGMCTG171-179STS ASM407v2 7 5032535 5032684 NA 0 0 54.7 3.42 10.1007/s00122-005-0121-1 t3659.M000268.1 NA t3659.T000366 1 powdery mildew resistance QTL analysis Santou x PI197088-1 RIL,F7 EAACMCTG116STS NA NA 0 0 NA 0 0 22.3 3.88 10.1007/s00122-005-0121-1 t3659.M000271.1 NA t3659.T000367 Swf-1 1 resistance to Melon yellow spot virus, resistance to Melon yellow spot virus MYSV-FuCu05P QTL analysis Tokiwa x 27028930 F2 SSR13109 ASM407v2 1 1317871 1318082 SSR5501 NA 0 0 29 10.5 10.1007/s10681-015-1444-x t3659.M000351.1 NA t3659.T000368 Swf-2 1 resistance to Melon yellow spot virus, resistance to Melon yellow spot virus MYSV-FuCu05P QTL analysis Tokiwa x 27028930 F2 CSN251 NA NA 0 0 CSN161 NA 0 0 34 11 10.1007/s10681-015-1444-x NA NA t3659.T000369 Swf-3 1 resistance to Melon yellow spot virus, resistance to Melon yellow spot virus MYSV-FuCu05P QTL analysis Tokiwa x 27028930 F2 SSR6225 NA NA 0 0 SSR276 NA 0 0 61.9 4.4 10.1007/s10681-015-1444-x NA NA t3659.T000370 Swf-4 1 resistance to Melon yellow spot virus, resistance to Melon yellow spot virus MYSV-FuCu05P QTL analysis Tokiwa x 27028930 F2 SSR22831 NA NA 0 0 SSR1009 NA 0 0 50.1 4.9 10.1007/s10681-015-1444-x t3659.M001298.1 NA t3659.T000371 pm-cl1.1_2010 1 Cotyledon resistance, pm-h locus, controlling hypocotyl resistance to powdery mildew (pm-cl5.2) QTL analysis WI 2757 x True Lemon F2:3 cl.loc7 NA NA 0 0 UW084490 1 13468013 13468207 26.7 3.9 10.1007/s00122-013-2125-6 NA t3659.M000029.1 t3659.T000372 pm-cl1.1_2012 1 Cotyledon resistance, pm-h locus, controlling hypocotyl resistance to powdery mildew (pm-cl5.2) QTL analysis WI 2757 x True Lemon F2:3 SSR00160 ASM407v2 1 4043136 4043287 c1.loc11 NA 0 0 24.7 4.3 10.1007/s00122-013-2125-6 t3659.M000003.1 NA t3659.T000373 pm-cl4.1 1 Cotyledon resistance, pm-h locus, controlling hypocotyl resistance to powdery mildew (pm-cl5.2) QTL analysis WI 2757 x True Lemon F2:3 UW084382 ASM407v2 4 4501034 4501161 c4.loc38 NA 0 0 72.5 3.9 10.1007/s00122-013-2125-6 t3659.M000126.1 NA t3659.T000374 pm-cl5.1_2011 1 Cotyledon resistance, pm-h locus, controlling hypocotyl resistance to powdery mildew (pm-cl5.2) QTL analysis WI 2757 x True Lemon F2:3 SSR32717 ASM407v2 5 15901406 15901582 SSR10725 5 16931384 16931528 54.4 13.4 10.1007/s00122-013-2125-6 t3659.M000173.1 t3659.M000176.1 t3659.T000375 pm-cl5.1_2012 1 Cotyledon resistance, pm-h locus, controlling hypocotyl resistance to powdery mildew (pm-cl5.2) QTL analysis WI 2757 x True Lemon F2:3 UW084461 ASM407v2 5 16231568 16231762 UW001619 5 18486795 18487073 58.6 13.1 10.1007/s00122-013-2125-6 t3659.M000174.1 t3659.M000181.1 t3659.T000376 pm-cl5.2 1 Cotyledon resistance, pm-h locus, controlling hypocotyl resistance to powdery mildew (pm-cl5.2) QTL analysis WI 2757 x True Lemon F2:3 SSR07531 NA NA 0 0 UW084533 5 23413666 23413865 80.7 8.5 10.1007/s00122-013-2125-6 t3659.M000177.1 t3659.M000189.1 t3659.T000377 pm-hy3.1 1 Hypocotyl resistance, pm-h locus, controlling hypocotyl resistance to powdery mildew (pm-hy5.1) QTL analysis WI 2757 x True Lemon F2:3 c3.loc28 NA NA 0 0 SSR30236 3 35029018 35029203 89.8 3.5 10.1007/s00122-013-2125-6 NA t3659.M000109.1 t3659.T000378 pm-hy4.1 1 Hypocotyl resistance, pm-h locus, controlling hypocotyl resistance to powdery mildew (pm-hy5.1) QTL analysis WI 2757 x True Lemon F2:3 SSR06225 NA NA 0 0 c4.loc24 NA 0 0 54.2 4.5 10.1007/s00122-013-2125-6 t3659.M000129.1 NA t3659.T000379 pm-hy5.1_HY2011 1 Hypocotyl resistance, pm-h locus, controlling hypocotyl resistance to powdery mildew (pm-hy5.1) QTL analysis WI 2757 x True Lemon F2:3 SSR10911 ASM407v2 5 23707669 23708336 UW084353 5 25419626 25419785 92.4 39.2 10.1007/s00122-013-2125-6 t3659.M000195.1 t3659.M000197.1 t3659.T000380 pm-hy5.1_HY2012.1 1 Hypocotyl resistance, pm-h locus, controlling hypocotyl resistance to powdery mildew (pm-hy5.1) QTL analysis WI 2757 x True Lemon F2:3 UW013295 ASM407v2 5 21413381 21413632 SSR13237 5 25176266 25176470 92.4 8.9 10.1007/s00122-013-2125-6 t3659.M000187.1 t3659.M000200.1 t3659.T000381 pm-hy5.1_HY2012.2 1 Hypocotyl resistance, pm-h locus, controlling hypocotyl resistance to powdery mildew (pm-hy5.1) QTL analysis WI 2757 x True Lemon F2:3 UW013256 ASM407v2 5 21493051 21493247 SSR13237 5 25176266 25176470 86.4 18.6 10.1007/s00122-013-2125-6 t3659.M000188.1 t3659.M000200.1 t3659.T000382 pm-hy5.1_HY2012.3 1 Hypocotyl resistance, pm-h locus, controlling hypocotyl resistance to powdery mildew (pm-hy5.1) QTL analysis WI 2757 x True Lemon F2:3 c5.loc25 NA NA 0 0 UW084353 5 25419626 25419785 92.4 40.2 10.1007/s00122-013-2125-6 NA t3659.M000197.1 t3659.T000383 pm-tl1.1 1 True leaf resistance, pm-h locus, controlling hypocotyl resistance to powdery mildew (pm-tl5.1, pm-tl5.2) QTL analysis WI 2757 x True Lemon F2:3 SSR04304 ASM407v2 1 2163403 2163585 c1.loc15 NA 0 0 46.2 4.2 10.1007/s00122-013-2125-6 t3659.M000008.1 NA t3659.T000384 pm-tl1.2 1 True leaf resistance, pm-h locus, controlling hypocotyl resistance to powdery mildew (pm-tl5.1, pm-tl5.2) QTL analysis WI 2757 x True Lemon F2:3 c1.loc18 NA NA 0 0 SSR05817 1 17913978 17914137 83.7 3.8 10.1007/s00122-013-2125-6 NA t3659.M000037.1 t3659.T000385 pm-tl5.1_2011 1 True leaf resistance, pm-h locus, controlling hypocotyl resistance to powdery mildew (pm-tl5.1, pm-tl5.2) QTL analysis WI 2757 x True Lemon F2:3 c5.loc16 NA NA 0 0 SSR13237 5 25176266 25176470 54.4 6.3 10.1007/s00122-013-2125-6 NA t3659.M000200.1 t3659.T000386 pm-tl5.1_2012 1 True leaf resistance, pm-h locus, controlling hypocotyl resistance to powdery mildew (pm-tl5.1, pm-tl5.2) QTL analysis WI 2757 x True Lemon F2:3 UW084461 ASM407v2 5 16231568 16231762 UW084533 5 23413666 23413865 54.4 7.6 10.1007/s00122-013-2125-6 t3659.M000174.1 t3659.M000189.1 t3659.T000387 pm-tl5.2 1 True leaf resistance, pm-h locus, controlling hypocotyl resistance to powdery mildew (pm-tl5.1, pm-tl5.2) QTL analysis WI 2757 x True Lemon F2:3 SSR32717 ASM407v2 5 15901406 15901582 SSR13237 5 25176266 25176470 80.7 4.9 10.1007/s00122-013-2125-6 t3659.M000173.1 t3659.M000200.1 t3659.T000388 4 Days to first flowering Interval mapping CC3 × SWCC8 F9 SSR16841 NA 0 0 SSR23049 0 0 86.2 3.5 10.3390/genes12071064 NA NA t3659.T000389 4 Days to first flowering Interval mapping CC3 × SWCC8 F9 SSR05723 NA 0 0 SSR22638 0 0 88.8 4.9 10.3390/genes12071064 NA NA t3659.T000390 1 Powdery mildew resistance GWAS 94 CG lines SSR23757 NA 1 5 0 UW019729 0 0 1.95 10.3390/genes12040584 NA NA t3659.T000391 1 Powdery mildew resistance GWAS 94 CG lines SSR04805 NA 1 17 0 SSR084288 29.17 Mb 0 0 18.61 10.3390/genes12040584 NA NA t3659.T000392 Csa2G030010, Csa2G030020, Csa2G030030 1 Powdery mildew resistance GWAS 94 CG lines NA 2 0 0 0 0 2.91 10.3390/genes12040584 NA NA t3659.T000393 1 Powdery mildew resistance GWAS 94 CG lines Marker2_8520308 NA 2 9 0 Marker2_12912775 12.91 Mb 0 0 8.39 10.3390/genes12040584 NA NA t3659.T000394 Csa3G414050 1 Powdery mildew resistance GWAS 94 CG lines NA 3 0 0 0 0 19.68 10.3390/genes12040584 NA NA t3659.T000395 Csa4G022350 1 Powdery mildew resistance GWAS 94 CG lines NA 4 0 0 0 0 2.43 10.3390/genes12040584 NA NA t3659.T000396 1 Powdery mildew resistance GWAS 94 CG lines SSR06 NA 4 10 0 SSR16038 20.4 Mb 0 0 15.16 10.3390/genes12040584 NA NA t3659.T000397 1 Powdery mildew resistance GWAS 94 CG lines CSWTA04 NA 5 4 0 CSJCT315 7.02 Mb 0 0 0.64 10.3390/genes12040584 NA NA t3659.T000398 Csa5G488800 1 Powdery mildew resistance GWAS 94 CG lines SSR15893 NA 5 15 0 UW013295 21.33 Mb 0 0 17.11 10.3390/genes12040584 NA NA t3659.T000399 Csa5G603950, Csa5G603960 1 Powdery mildew resistance GWAS 94 CG lines uw013295 NA 5 21 0 SSR13237 25.17 Mb 0 0 22.31 10.3390/genes12040584 NA NA t3659.T000400 1 Powdery mildew resistance GWAS 94 CG lines Marker5_24647715 NA 5 25 0 Marker5_26224508 26.22 Mb 0 0 24.67 10.3390/genes12040584 NA NA t3659.T000401 1 Powdery mildew resistance GWAS 94 CG lines SSR7198 NA 6 5 0 CS41 0 0 3.12 10.3390/genes12040584 NA NA t3659.T000402 1 Powdery mildew resistance GWAS 94 CG lines Marker6_23875073 NA 6 24 0 Marker6_26499531 26.49 Mb 0 0 22.11 10.3390/genes12040584 NA NA t3659.T000403 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-16 NA 4 19973741 0 0 0 15.07 10.1186/s12864-021-07548-8 NA NA t3659.T000404 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-23 NA 4 20505510 0 0 0 15.28 10.1186/s12864-021-07548-8 NA NA t3659.T000405 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-17 NA 4 19973782 0 0 0 13.89 10.1186/s12864-021-07548-8 NA NA t3659.T000406 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 DNP-24 NA 4 20521004 0 0 0 16.06 10.1186/s12864-021-07548-8 NA NA t3659.T000407 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-1 NA 4 13786976 0 0 0 0 0.22 10.1186/s12864-021-07548-8 NA NA t3659.T000408 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 InDel-1 NA 4 13786987 0 0 0 0.124 0.22 10.1186/s12864-021-07548-8 NA NA t3659.T000409 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-2 NA 4 17143696 0 0 0 3.827 0.4 10.1186/s12864-021-07548-8 NA NA t3659.T000410 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-5 NA 4 18251971 0 0 0 8.22 0.09 10.1186/s12864-021-07548-8 NA NA t3659.T000411 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-4 NA 4 18251951 0 0 0 8.486 0.17 10.1186/s12864-021-07548-8 NA NA t3659.T000412 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-3 NA 4 18251895 0 0 0 8.513 0.17 10.1186/s12864-021-07548-8 NA NA t3659.T000413 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-9 NA 4 18614772 0 0 0 8.555 0.14 10.1186/s12864-021-07548-8 NA NA t3659.T000414 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-8 NA 4 18605011 0 0 0 8.609 0.13 10.1186/s12864-021-07548-8 NA NA t3659.T000415 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-7 NA 4 18601010 0 0 0 8.632 0.13 10.1186/s12864-021-07548-8 NA NA t3659.T000416 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-6 NA 4 18251973 0 0 0 8.762 0.14 10.1186/s12864-021-07548-8 NA NA t3659.T000417 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-11 NA 4 18938019 0 0 0 9.176 0.23 10.1186/s12864-021-07548-8 NA NA t3659.T000418 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-12 NA 4 18938031 0 0 0 9.176 0.23 10.1186/s12864-021-07548-8 NA NA t3659.T000419 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-10 NA 4 18937823 0 0 0 9.269 0.21 10.1186/s12864-021-07548-8 NA NA t3659.T000420 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-22 NA 4 19995137 0 0 0 10.395 0.35 10.1186/s12864-021-07548-8 NA NA t3659.T000421 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-20 NA 4 19995109 0 0 0 10.395 0.35 10.1186/s12864-021-07548-8 NA NA t3659.T000422 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-18 NA 4 19995077 0 0 0 10.395 0.35 10.1186/s12864-021-07548-8 NA NA t3659.T000423 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-21 NA 4 19995123 0 0 0 10.395 0.35 10.1186/s12864-021-07548-8 NA NA t3659.T000424 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-19 NA 4 19995107 0 0 0 10.395 0.35 10.1186/s12864-021-07548-8 NA NA t3659.T000425 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-13 NA 4 19973681 0 0 0 10.446 0.22 10.1186/s12864-021-07548-8 NA NA t3659.T000426 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-15 NA 4 19973724 0 0 0 10.449 0.22 10.1186/s12864-021-07548-8 NA NA t3659.T000427 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-17 NA 4 19973782 0 0 0 10.455 0.22 10.1186/s12864-021-07548-8 NA NA t3659.T000428 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-14 NA 4 19973692 0 0 0 10.598 0.56 10.1186/s12864-021-07548-8 NA NA t3659.T000429 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-16 NA 4 19973741 0 0 0 10.598 15.07 10.1186/s12864-021-07548-8 NA NA t3659.T000430 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-23 NA 4 20505510 0 0 0 11.886 15.28 10.1186/s12864-021-07548-8 NA NA t3659.T000431 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-24 NA 4 20521004 0 0 0 12.005 0.01 10.1186/s12864-021-07548-8 NA NA t3659.T000432 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-25 NA 4 20791425 0 0 0 12.594 0.06 10.1186/s12864-021-07548-8 NA NA t3659.T000433 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 InDel-4 NA 4 21079500 0 0 0 13.909 0.15 10.1186/s12864-021-07548-8 NA NA t3659.T000434 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 InDel-3 NA 4 21075917 0 0 0 13.909 0.15 10.1186/s12864-021-07548-8 NA NA t3659.T000435 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 InDel-2 NA 4 21075353 0 0 0 14.262 0.15 10.1186/s12864-021-07548-8 NA NA t3659.T000436 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 InDel-1 NA 4 13786987 0 0 0 0 1.38 10.1186/s12864-021-07548-8 NA NA t3659.T000437 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-1 NA 4 13786976 0 0 0 0 1.38 10.1186/s12864-021-07548-8 NA NA t3659.T000438 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-2 NA 4 17143696 0 0 0 3.84 0.77 10.1186/s12864-021-07548-8 NA NA t3659.T000439 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-6 NA 4 18251973 0 0 0 7.831 0.73 10.1186/s12864-021-07548-8 NA NA t3659.T000440 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-4 NA 4 18251951 0 0 0 7.887 0.73 10.1186/s12864-021-07548-8 NA NA t3659.T000441 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-3 NA 4 18251895 0 0 0 7.919 0.73 10.1186/s12864-021-07548-8 NA NA t3659.T000442 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-5 NA 4 18251971 0 0 0 7.929 0.73 10.1186/s12864-021-07548-8 NA NA t3659.T000443 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-9 NA 4 18614772 0 0 0 8.101 0.89 10.1186/s12864-021-07548-8 NA NA t3659.T000444 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-8 NA 4 18605011 0 0 0 8.113 0.89 10.1186/s12864-021-07548-8 NA NA t3659.T000445 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-7 NA 4 18601010 0 0 0 8.113 0.89 10.1186/s12864-021-07548-8 NA NA t3659.T000446 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-10 NA 4 18937823 0 0 0 8.817 0.91 10.1186/s12864-021-07548-8 NA NA t3659.T000447 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-12 NA 4 18938031 0 0 0 8.839 0.91 10.1186/s12864-021-07548-8 NA NA t3659.T000448 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-11 NA 4 18938019 0 0 0 8.839 0.91 10.1186/s12864-021-07548-8 NA NA t3659.T000449 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-16 NA 4 19973741 0 0 0 10.457 2.48 10.1186/s12864-021-07548-8 NA NA t3659.T000450 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-14 NA 4 19973692 0 0 0 10.457 2.48 10.1186/s12864-021-07548-8 NA NA t3659.T000451 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-15 NA 4 19973724 0 0 0 10.479 2.47 10.1186/s12864-021-07548-8 NA NA t3659.T000452 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-13 NA 4 19973681 0 0 0 10.507 2.47 10.1186/s12864-021-07548-8 NA NA t3659.T000453 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-22 NA 4 19995137 0 0 0 10.514 2.46 10.1186/s12864-021-07548-8 NA NA t3659.T000454 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-18 NA 4 19995077 0 0 0 10.514 2.46 10.1186/s12864-021-07548-8 NA NA t3659.T000455 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-21 NA 4 19995123 0 0 0 10.514 2.46 10.1186/s12864-021-07548-8 NA NA t3659.T000456 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-20 NA 4 19995109 0 0 0 10.514 2.46 10.1186/s12864-021-07548-8 NA NA t3659.T000457 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-19 NA 4 19995107 0 0 0 10.514 2.46 10.1186/s12864-021-07548-8 NA NA t3659.T000458 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-17 NA 4 19973782 0 0 0 10.578 13.89 10.1186/s12864-021-07548-8 NA NA t3659.T000459 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-24 NA 4 20521004 0 0 0 12.892 16.06 10.1186/s12864-021-07548-8 NA NA t3659.T000460 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-23 NA 4 20505510 0 0 0 12.892 1.52 10.1186/s12864-021-07548-8 NA NA t3659.T000461 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 SNP-25 NA 4 20791425 0 0 0 13.451 0.43 10.1186/s12864-021-07548-8 NA NA t3659.T000462 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 InDel-3 NA 4 21075917 0 0 0 14.968 0.03 10.1186/s12864-021-07548-8 NA NA t3659.T000463 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 InDel-4 NA 4 21079500 0 0 0 14.968 0.03 10.1186/s12864-021-07548-8 NA NA t3659.T000464 4 Pre-harvest sprouting QTL mapping Q12 × P60 F2 InDel-2 NA 4 21075353 0 0 0 15.156 0.08 10.1186/s12864-021-07548-8 NA NA t3659.T000465 1 Heat tolerance QTL mapping “931” × “99281” F2 SSR23757 NA 0 0 0 0 4 20.96 10.3390/plants10020324 NA NA t3659.T000466 1 Heat tolerance QTL mapping “931” × “99281” F2 SSR23757 NA 0 0 0 0 4 24.84 10.3390/plants10020324 NA NA t3659.T000467 1 Heat tolerance QTL mapping “931” × “99281” F2 SSR23757 NA 0 0 0 0 4 12.72 10.3390/plants10020324 NA NA t3659.T000468 1 Downy mildew resistance Interval mapping CSL0067 × CSL0139 F2 SSR03943 NA 0 0 SSR19172 0 0 12 6.407 10.1007/s12041-020-01242-6 NA NA t3659.T000469 1 Downy mildew resistance Interval mapping CSL0067 × CSL0139 F2 SSR19172 NA 0 0 SSR07531 0 0 38 7.884 10.1007/s12041-020-01242-6 NA NA t3659.T000470 1 Downy mildew resistance Interval mapping CSL0067 × CSL0139 F2 SSR03943 NA 0 0 SSR20859 0 0 4 9.165 10.1007/s12041-020-01242-6 NA NA t3659.T000471 1 Downy mildew resistance Interval mapping CSL0067 × CSL0139 F2 SSR03943 NA 0 0 SSR20486 0 0 2 4.421 10.1007/s12041-020-01242-6 NA NA t3659.T000472 1 Downy mildew resistance Interval mapping CSL0067 × CSL0139 F2 SSR22501 NA 0 0 SSR18530 0 0 34 3.538 10.1007/s12041-020-01242-6 NA NA t3659.T000473 1 Downy mildew resistance Interval mapping CSL0067 × CSL0139 F2 SSR18619 NA 0 0 SSR15316 0 0 78 5.14 10.1007/s12041-020-01242-6 NA NA t3659.T000474 1 Downy mildew resistance Interval mapping CSL0067 × CSL0139 F2 SSR20074 NA 0 0 SSR15316 0 0 64 7.121 10.1007/s12041-020-01242-6 NA NA t3659.T000475 1 Downy mildew resistance Interval mapping CSL0067 × CSL0139 F2 SSR03943 NA 0 0 SSR20486 0 0 4 6.641 10.1007/s12041-020-01242-6 NA NA t3659.T000476 1 Downy mildew resistance Interval mapping CSL0067 × CSL0139 F2 SSR23265 NA 0 0 SSR19172 0 0 12 5.75 10.1007/s12041-020-01242-6 NA NA t3659.T000477 1 Downy mildew resistance Interval mapping CSL0067 × CSL0139 F2 SSR20074 NA 0 0 SSR15316 0 0 64 6.507 10.1007/s12041-020-01242-6 NA NA t3659.T000478 1 Downy mildew resistance Interval mapping CSL0067 × CSL0139 F2 SSR20074 NA 0 0 SSR18619 0 0 64 4.544 10.1007/s12041-020-01242-6 NA NA t3659.T000479 1 Downy mildew resistance Interval mapping CSL0067 × CSL0139 F2 SSR11835 NA 0 0 SSR29630 0 0 0 5.435 10.1007/s12041-020-01242-6 NA NA t3659.T000480 1 Downy mildew resistance Interval mapping CSL0067 × CSL0139 F2 SSR03943 NA 0 0 SSR20859 0 0 8 5.399 10.1007/s12041-020-01242-6 NA NA t3659.T000481 1 Downy mildew resistance Interval mapping CSL0067 × CSL0139 F2 SSR21760 NA 0 0 SSR21886 0 0 38 5.954 10.1007/s12041-020-01242-6 NA NA t3659.T000482 1 Downy mildew resistance GWAS 97 CG lines UW044821 NA 1 2107675 0 SSR05793 0 0 < 3.15 × 10-6 10.3390/plants9121659 NA NA t3659.T000483 1 Downy mildew resistance GWAS 97 CG lines UW084539 NA 1 10520443 0 SSR16055 0 0 < 3.15 × 10-6 10.3390/plants9121659 NA NA t3659.T000484 1 Downy mildew resistance GWAS 97 CG lines Marker1_15701257 NA 1 16465444 0 Marker1_26471365 0 0 < 3.15 × 10-6 10.3390/plants9121659 NA NA t3659.T000485 1 Downy mildew resistance GWAS 97 CG lines Marker1_15701257 NA 1 21761223 0 Marker1_26471365 0 0 < 3.15 × 10-6 10.3390/plants9121659 NA NA t3659.T000486 1 Downy mildew resistance GWAS 97 CG lines NA 2 4618724 0 0 0 < 3.15 × 10-6 10.3390/plants9121659 NA NA t3659.T000487 1 Downy mildew resistance GWAS 97 CG lines SSR13532 NA 2 8449502 0 SSR13105 0 0 < 3.15 × 10-6 10.3390/plants9121659 NA NA t3659.T000488 1 Downy mildew resistance GWAS 97 CG lines Marker2_7976333 NA 2 12989299 0 Marker2_12537499 0 0 < 3.15 × 10-6 10.3390/plants9121659 NA NA t3659.T000489 1 Downy mildew resistance GWAS 97 CG lines SSR16264 NA 3 8524603 0 SSR13312 0 0 < 3.15 × 10-6 10.3390/plants9121659 NA NA t3659.T000490 1 Downy mildew resistance GWAS 97 CG lines SSR00012 NA 4 5302408 0 SSR13159 0 0 < 3.15 × 10-6 10.3390/plants9121659 NA NA t3659.T000491 1 Downy mildew resistance GWAS 97 CG lines SSR00012 NA 4 13242382 0 SSR13159 0 0 < 3.15 × 10-6 10.3390/plants9121659 NA NA t3659.T000492 1 Downy mildew resistance GWAS 97 CG lines SSR00012 NA 4 19027366 0 SSR13159 0 0 < 3.15 × 10-6 10.3390/plants9121659 NA NA t3659.T000493 1 Downy mildew resistance GWAS 97 CG lines Marker5_16446482 NA 5 18119570 0 Marker5_18140438 0 0 < 3.15 × 10-6 10.3390/plants9121659 NA NA t3659.T000494 1 Downy mildew resistance GWAS 97 CG lines SSR01498 NA 5 22899752 0 InDel82 0 0 < 3.15 × 10-6 10.3390/plants9121659 NA NA t3659.T000495 1 Downy mildew resistance GWAS 97 CG lines NA 6 13977656 0 0 0 < 3.15 × 10-6 10.3390/plants9121659 NA NA t3659.T000496 1 Downy mildew resistance GWAS 97 CG lines SSR01148 NA 6 25297012 0 SSR05946 0 0 < 3.15 × 10-6 10.3390/plants9121659 NA NA t3659.T000497 1 Downy mildew resistance GWAS 97 CG lines SSR01148 NA 6 28650383 0 SSR05946 0 0 < 3.15 × 10-6 10.3390/plants9121659 NA NA t3659.T000498 1 Downy mildew resistance GWAS 97 CG lines NA 7 84900 0 0 0 < 3.15 × 10-6 10.3390/plants9121659 NA NA t3659.T000499 1 Downy mildew resistance GWAS 97 CG lines SSR33278 NA 7 18251423 0 SSR477 0 0 < 3.15 × 10-6 10.3390/plants9121659 NA NA t3659.T000500 1 Downy mildew resistance, Necrosis QTL mapping PI 197088 × HS279 F3BC3S3 mCU945_ks NA Chr4 12127169 0 mCU3474_ks 0 0 10.3389/fpls.2020.569876 NA NA t3659.T000501 1 Downy mildew resistance, Sporulation QTL mapping PI 197088 × HS279 F3BC3S3 mCU9280_ks NA Chr4 15766975 0 mCU1422_ks 0 0 10.3389/fpls.2020.569876 NA NA t3659.T000502 1 Downy mildew resistance, Chlorosis QTL mapping PI 197088 × HS279 F3BC3S3 mCU1422_ks NA Chr4 18469868 0 mCU96_ks 0 0 10.3389/fpls.2020.569876 NA NA t3659.T000503 1 Downy mildew resistance QTL-seq, interval mapping PM-R × PM-S F2 PM5-23.1 NA 5 16 0 13 0 11 10.1007/s00122-020-03705-x NA NA t3659.T000504 1 Downy mildew resistance QTL-seq, interval mapping PM-R × PM-S F2 PM6-12.08 NA 6 11 0 12 0 3.2 10.1007/s00122-020-03705-x NA NA t3659.T000505 mft1.1 4 male flowering time QTL mapping WI7088D × Coolgreen RIL Marker1_25833145 NA 1 29105085 0 30206613 0 0 101.3 11.7 10.1007/s00122-020-03693-y NA NA t3659.T000506 fft1.1 4 first female flowering time QTL mapping WI7088D × Coolgreen RIL Marker1_25833145 NA 1 29105085 0 30308306 0 0 101.3 13.7 10.1007/s00122-020-03693-y NA NA t3659.T000507 fft1.1 4 immature fruit length QTL mapping WI7088D × Coolgreen RIL Marker1_24121076 NA 1 25246413 0 32220161 0 0 97 3.6 10.1007/s00122-020-03693-y NA NA t3659.T000508 fl2.1 4 immature fruit length QTL mapping WI7088D × Coolgreen RIL Marker2_8521946 NA 2 6601244 0 9712024 0 0 34 5.1 10.1007/s00122-020-03693-y NA NA t3659.T000509 fl3.1 4 immature fruit length QTL mapping WI7088D × Coolgreen RIL Marker3_30828638 NA 3 32285199 0 33233787 0 0 108 6.7 10.1007/s00122-020-03693-y NA NA t3659.T000510 fl5.1 4 immature fruit length QTL mapping WI7088D × Coolgreen RIL Marker5_20769552 NA 5 25709527 0 27358895 0 0 91 11.2 10.1007/s00122-020-03693-y NA NA t3659.T000511 mfl1.1 4 mature fruit length QTL mapping WI7088D × Coolgreen RIL Marker1_24249486 NA 1 24650081 0 32345838 0 0 98 2.4 10.1007/s00122-020-03693-y NA NA t3659.T000512 mfl2.1 4 mature fruit length QTL mapping WI7088D × Coolgreen RIL Marker2_8521946 NA 2 8085486 0 9712024 0 0 34 5.2 10.1007/s00122-020-03693-y NA NA t3659.T000513 mfl3.1 4 mature fruit length QTL mapping WI7088D × Coolgreen RIL Marker3_30828638 NA 3 32595051 0 33233787 0 0 109 6.8 10.1007/s00122-020-03693-y NA NA t3659.T000514 mfl5.1 4 mature fruit length QTL mapping WI7088D × Coolgreen RIL Marker5_20769552 NA 5 25709527 0 27358895 0 0 91 18.1 10.1007/s00122-020-03693-y NA NA t3659.T000515 fd3.2 4 immature fruit diameter QTL mapping WI7088D × Coolgreen RIL Marker3_30828638 NA 3 32285199 0 33233787 0 0 108 7.1 10.1007/s00122-020-03693-y NA NA t3659.T000516 mfd1.1 4 mature fruit diameter QTL mapping WI7088D × Coolgreen RIL Marker1_4909574 NA 1 4453058 0 6017616 0 0 24 10.7 10.1007/s00122-020-03693-y NA NA t3659.T000517 mfd1.2 4 mature fruit diameter QTL mapping WI7088D × Coolgreen RIL Marker1_19452335 NA 1 21176071 0 26811846 0 0 86.6 3.15 10.1007/s00122-020-03693-y NA NA t3659.T000518 mfd3.1 4 mature fruit diameter QTL mapping WI7088D × Coolgreen RIL Marker3_4116186 NA 3 1576665 0 8806598 0 0 9.14 2.86 10.1007/s00122-020-03693-y NA NA t3659.T000519 mfd3.2 4 mature fruit diameter QTL mapping WI7088D × Coolgreen RIL Marker3_30705137 NA 3 30100041 0 33233787 0 0 107 3.1 10.1007/s00122-020-03693-y NA NA t3659.T000520 fh1.1 4 immature fruit hollow QTL mapping WI7088D × Coolgreen RIL Marker1_25208614 NA 1 25993075 0 32882555 0 0 100 2.6 10.1007/s00122-020-03693-y NA NA t3659.T000521 fh3.1 4 immature fruit hollow QTL mapping WI7088D × Coolgreen RIL Marker3_30828638 NA 3 32595051 0 34080969 0 0 109 3.8 10.1007/s00122-020-03693-y NA NA t3659.T000522 mfh1.1 4 mature fruit hollow QTL mapping WI7088D × Coolgreen RIL Marker1_25208614 NA 1 25424032 0 31432926 0 0 100 6.7 10.1007/s00122-020-03693-y NA NA t3659.T000523 mfh2.1 4 mature fruit hollow QTL mapping WI7088D × Coolgreen RIL Marker2_18037320 NA 2 29439979 0 30074753 0 0 96 5.4 10.1007/s00122-020-03693-y NA NA t3659.T000524 mfh3.1 4 mature fruit hollow QTL mapping WI7088D × Coolgreen RIL Marker3_32199400 NA 3 32724554 0 35433906 0 0 115 6.7 10.1007/s00122-020-03693-y NA NA t3659.T000525 fh2.1 4 immature fruit hollow QTL mapping WI7088D × Coolgreen RIL Marker2_18092880 NA 2 27999043 0 30243767 0 0 96 2.5 10.1007/s00122-020-03693-y NA NA t3659.T000526 fh3.1 4 immature fruit hollow QTL mapping WI7088D × Coolgreen RIL Marker3_30828638 NA 3 32595051 0 33958317 0 0 110 2.7 10.1007/s00122-020-03693-y NA NA t3659.T000527 mfh1.1 4 mature fruit hollow QTL mapping WI7088D × Coolgreen RIL Marker1_25208614 NA 1 26720172 0 31432926 0 0 100 7.6 10.1007/s00122-020-03693-y NA NA t3659.T000528 mfh2.1 4 mature fruit hollow QTL mapping WI7088D × Coolgreen RIL Marker2_18092880 NA 2 29439979 0 30243767 0 0 97 5.1 10.1007/s00122-020-03693-y NA NA t3659.T000529 mfh3.1 4 mature fruit hollow QTL mapping WI7088D × Coolgreen RIL Marker3_32199400 NA 3 32724554 0 35289751 0 0 116 5.6 10.1007/s00122-020-03693-y NA NA t3659.T000530 fth3.1 4 mature fruit flesh thickness QTL mapping WI7088D × Coolgreen RIL Marker3_30828638 NA 3 30396334 0 33233787 0 0 108 3.4 10.1007/s00122-020-03693-y NA NA t3659.T000531 fth5.1 4 mature fruit flesh thickness QTL mapping WI7088D × Coolgreen RIL Marker5_20769552 NA 5 25162283 0 27358895 0 0 91 8.8 10.1007/s00122-020-03693-y NA NA t3659.T000532 mfth3.1 4 immature fruit flesh thickness QTL mapping WI7088D × Coolgreen RIL Marker3_30787656 NA 3 32102008 0 33233787 0 0 107 5.04 10.1007/s00122-020-03693-y NA NA t3659.T000533 mfth5.1 4 immature fruit flesh thickness QTL mapping WI7088D × Coolgreen RIL Marker5_20769552 NA 5 24148399 0 27358895 0 0 91 11 10.1007/s00122-020-03693-y NA NA t3659.T000534 fpl1.1 4 fruit peduncle length QTL mapping WI7088D × Coolgreen RIL Marker1_3452597 NA 1 3011221 0 7398592 0 0 16 4.93 10.1007/s00122-020-03693-y NA NA t3659.T000535 fpl3.1 4 fruit peduncle length QTL mapping WI7088D × Coolgreen RIL Marker3_31747276 NA 3 31952275 0 35011329 0 0 114 4.74 10.1007/s00122-020-03693-y NA NA t3659.T000536 vl1.1 4 vine length QTL mapping WI7088D × Coolgreen RIL Marker1_25833145 NA 1 28875890 0 31432926 0 0 101 9.84 10.1007/s00122-020-03693-y NA NA t3659.T000537 fn2.1 4 fruit number QTL mapping WI7088D × Coolgreen RIL Marker2_12537499 NA 2 11470230 0 13120930 0 0 49 7.1 10.1007/s00122-020-03693-y NA NA t3659.T000538 fn3.1 4 fruit number QTL mapping WI7088D × Coolgreen RIL Marker3_30828638 NA 3 32594223 0 33233787 0 0 108 8.6 10.1007/s00122-020-03693-y NA NA t3659.T000539 fn5.1 4 fruit number QTL mapping WI7088D × Coolgreen RIL Marker5_22908056 NA 5 32102008 0 30128740 0 0 106 11.2 10.1007/s00122-020-03693-y NA NA t3659.T000540 H 4 fruit skin netting QTL mapping WI7088D × Coolgreen RIL c5.loc89 NA 5 25709527 0 26420641 0 0 52.8 10.1007/s00122-020-03693-y NA NA t3659.T000541 B 4 mature fruit ground color QTL mapping WI7088D × Coolgreen RIL Marker4_633156 NA 4 384258 0 667906 0 0 3 46.4 10.1007/s00122-020-03693-y NA NA t3659.T000542 B 4 fruit skin netting QTL mapping WI7088D × Coolgreen RIL Marker4_633156 NA 4 384258 0 667906 0 0 3 79.1 10.1007/s00122-020-03693-y NA NA t3659.T000543 mft6.1 4 male flowering time QTL mapping WI7120 × 9930 F2:3 SSR02385 NA 6 5309327 0 10893377 0 0 36.4 3.91 10.1007/s00122-020-03693-y NA NA t3659.T000544 fft6.1 4 first female flowering time QTL mapping WI7120 × 9930 F2:3 SSR02385 NA 6 5309327 0 10893377 0 0 36.4 4.86 10.1007/s00122-020-03693-y NA NA t3659.T000545 mfl1.1 4 mature fruit length QTL mapping WI7120 × 9930 F2:3 SSR14526 NA 1 7767050 0 16705067 0 0 36 16.7 10.1007/s00122-020-03693-y NA NA t3659.T000546 mfd2.1 4 mature fruit diameter QTL mapping WI7120 × 9930 F2:3 SSR16135 NA 2 28396686 0 30401524 0 0 81 8.5 10.1007/s00122-020-03693-y NA NA t3659.T000547 mfh2.1 4 mature fruit hollow QTL mapping WI7120 × 9930 F2:3 SSR16135 NA 2 28396686 0 30246273 0 0 81 15.91 10.1007/s00122-020-03693-y NA NA t3659.T000548 mfh2.1 4 mature fruit hollow QTL mapping WI7120 × 9930 F2:3 SSR16135 NA 2 28396686 0 30401524 0 0 81 12.17 10.1007/s00122-020-03693-y NA NA t3659.T000549 mfth3.1 4 mature fruit flesh thickness QTL mapping WI7120 × 9930 F2:3 SSR11699 NA 3 32699333 0 34767643 0 0 75 3.22 10.1007/s00122-020-03693-y NA NA t3659.T000550 B 4 fruit spine color QTL mapping WI7120 × 9930 F2:3 B NA 4 0 0 0 0 69.12 10.1007/s00122-020-03693-y NA NA t3659.T000551 B 4 mature fruit ground color QTL mapping WI7120 × 9930 F2:3 c4.loc10 NA 4 0 0 0 0 32.34 10.1007/s00122-020-03693-y NA NA t3659.T000552 Rs 4 fruit skin netting QTL mapping WI7120 × 9930 F2:3 SSR17736 NA 1 11298441 0 18922005 0 0 39 25.32 10.1007/s00122-020-03693-y NA NA t3659.T000553 1 Thermotolerance, short-term extreme heat stress QTL mapping 65G × 02245 HR NA 3 31236735 0 31344231 0 0 3.9 10.3390/plants9091155 NA NA t3659.T000554 1 Thermotolerance, short-term extreme heat stress QTL mapping 65G × 02245 HP NA 3 31699402 0 33960084 0 0 5.9 10.3390/plants9091155 NA NA t3659.T000555 1 Thermotolerance, long-term mild heat stress QTL mapping 65G × 02245 HR NA 3 32180242 0 32661417 0 0 10.1 10.3390/plants9091155 NA NA t3659.T000556 1 Thermotolerance, long-term mild heat stress QTL mapping 65G × 02245 HR NA 4 21608172 0 21864140 0 0 4.5 10.3390/plants9091155 NA NA t3659.T000557 1 Thermotolerance, long-term mild heat stress QTL mapping 65G × 02245 HR NA 6 4439107 0 4498675 0 0 3.8 10.3390/plants9091155 NA NA t3659.T000558 1 Thermotolerance, long-term mild heat stress QTL mapping 65G × 02245 HP NA 3 4939077 0 5566247 0 0 5.7 10.3390/plants9091155 NA NA t3659.T000559 1 Thermotolerance, long-term mild heat stress QTL mapping 65G × 02245 HP NA 3 31776615 0 32667875 0 0 9.9 10.3390/plants9091155 NA NA t3659.T000560 1 Thermotolerance, long-term mild heat stress QTL mapping 65G × 02245 HP NA 4 18727523 0 18935103 0 0 3.3 10.3390/plants9091155 NA NA t3659.T000561 4 Flowering time Interval mapping WI2757 × TL F2 SSR04805 NA 1 20481399 0 0 0 4.6 10.1007/s00122-020-03596-y NA NA t3659.T000562 4 Flowering time Interval mapping WI2757 × TL F2 SSR15482 NA 6 27270372 0 0 0 5.2 10.1007/s00122-020-03596-y NA NA t3659.T000563 4 Flowering time Interval mapping, QTL mapping WI2757 × TL F2 Marker1_18664549 NA 1 22175676 0 0 0 10.9 10.1007/s00122-020-03596-y NA NA t3659.T000564 4 Flowering time Interval mapping, QTL mapping WI2757 × TL F2 Marker1_23086761 NA 1 26731655 0 0 0 13.8 10.1007/s00122-020-03596-y NA NA t3659.T000565 4 Flowering time Interval mapping, QTL mapping WI2757 × TL F2 Marker1_19939037 NA 1 23471205 0 0 0 12.2 10.1007/s00122-020-03596-y NA NA t3659.T000566 4 Fruit length Interval mapping, QTL mapping WI2757 × TL F2 UW084377 NA 1 16711449 0 0 0 5 10.1007/s00122-020-03596-y NA NA t3659.T000567 4 Fruit length Interval mapping, QTL mapping WI2757 × TL F2 012F_926781 NA 1 17293627 0 0 0 6.3 10.1007/s00122-020-03596-y NA NA t3659.T000568 4 Fruit length Interval mapping, QTL mapping WI2757 × TL F2 UW050055 NA 1 31422515 0 0 0 19.4 10.1007/s00122-020-03596-y NA NA t3659.T000569 4 Fruit length Interval mapping, QTL mapping WI2757 × TL F2 UW084538 NA 1 31422515 0 0 0 22.1 10.1007/s00122-020-03596-y NA NA t3659.T000570 4 Fruit length Interval mapping, QTL mapping WI2757 × TL F2 Marker1_19918318 NA 1 23483836 0 0 0 24 10.1007/s00122-020-03596-y NA NA t3659.T000571 4 Fruit length Interval mapping, QTL mapping WI2757 × TL F2 Marker1_23166425 NA 1 26811505 0 0 0 16.3 10.1007/s00122-020-03596-y NA NA t3659.T000572 4 Fruit length Interval mapping, QTL mapping WI2757 × TL F2 Marker1_19918318 NA 1 23483836 0 0 0 20.1 10.1007/s00122-020-03596-y NA NA t3659.T000573 4 Fruit length QTL mapping WI2757 × TL F2 c3.loc70 NA 3 0 0 0 0 3.4 10.1007/s00122-020-03596-y NA NA t3659.T000574 4 Fruit length Interval mapping WI2757 × TL F2 c4.loc46 NA 4 0 0 0 0 4.2 10.1007/s00122-020-03596-y NA NA t3659.T000575 4 Fruit length QTL mapping WI2757 × TL F2 c4.loc64 NA 4 0 0 0 0 4.2 10.1007/s00122-020-03596-y NA NA t3659.T000576 4 Fruit length Interval mapping WI2757 × TL F2 Marker6_25501791 NA 6 28829673 0 0 0 3.9 10.1007/s00122-020-03596-y NA NA t3659.T000577 4 Fruit diameter Interval mapping, QTL mapping WI2757 × TL F2 UW084540 NA 1 8915615 0 0 0 4.9 10.1007/s00122-020-03596-y NA NA t3659.T000578 4 Fruit diameter Interval mapping WI2757 × TL F2 034F_323106 NA 1 13862514 0 0 0 3.3 10.1007/s00122-020-03596-y NA NA t3659.T000579 4 Fruit diameter Interval mapping, QTL mapping WI2757 × TL F2 SSR01816 NA 1 10462162 0 0 0 3.1 10.1007/s00122-020-03596-y NA NA t3659.T000580 4 Fruit diameter Interval mapping, QTL mapping WI2757 × TL F2 Marker1_12242079 NA 1 13651158 0 0 0 5.3 10.1007/s00122-020-03596-y NA NA t3659.T000581 4 Fruit diameter Interval mapping, QTL mapping WI2757 × TL F2 SSR13830 NA 1 28065667 0 0 0 4.9 10.1007/s00122-020-03596-y NA NA t3659.T000582 4 Fruit diameter Interval mapping, QTL mapping WI2757 × TL F2 Marker1_19918318 NA 1 23483836 0 0 0 5.8 10.1007/s00122-020-03596-y NA NA t3659.T000583 4 Fruit diameter Interval mapping, QTL mapping WI2757 × TL F2 UW084538 NA 1 31422515 0 0 0 5.3 10.1007/s00122-020-03596-y NA NA t3659.T000584 4 Fruit diameter Interval mapping, QTL mapping WI2757 × TL F2 Marker1_19918318 NA 1 23483836 0 0 0 9.3 10.1007/s00122-020-03596-y NA NA t3659.T000585 4 Fruit diameter Interval mapping WI2757 × TL F2 UW084071 NA 4 237807 0 0 0 3.7 10.1007/s00122-020-03596-y NA NA t3659.T000586 4 Fruit diameter QTL mapping WI2757 × TL F2 c5.loc92 NA 5 0 0 0 0 3 10.1007/s00122-020-03596-y NA NA t3659.T000587 4 Fruit diameter Interval mapping, QTL mapping WI2757 × TL F2 Marker5_22084017 NA 5 27761877 0 0 0 3.2 10.1007/s00122-020-03596-y NA NA t3659.T000588 4 Fruit diameter Interval mapping WI2757 × TL F2 SSR01331 NA 6 10658631 0 0 0 3.9 10.1007/s00122-020-03596-y NA NA t3659.T000589 4 Fruit diameter Interval mapping, QTL mapping WI2757 × TL F2 Marker6_17243061 NA 6 20199470 0 0 0 3.7 10.1007/s00122-020-03596-y NA NA t3659.T000590 4 Fruit shape Interval mapping, QTL mapping WI2757 × TL F2 UW029623 NA 1 9073308 0 0 0 5.7 10.1007/s00122-020-03596-y NA NA t3659.T000591 4 Fruit shape Interval mapping, QTL mapping WI2757 × TL F2 c1.loc118 NA 1 0 0 0 0 10.7 10.1007/s00122-020-03596-y NA NA t3659.T000592 4 Fruit shape Interval mapping, QTL mapping WI2757 × TL F2 X034F_323106 NA 1 13862514 0 0 0 10.2 10.1007/s00122-020-03596-y NA NA t3659.T000593 4 Fruit shape Interval mapping, QTL mapping WI2757 × TL F2 UW083720 NA 1 14349386 0 0 0 9.4 10.1007/s00122-020-03596-y NA NA t3659.T000594 4 Fruit shape Interval mapping, QTL mapping WI2757 × TL F2 UW084538 NA 1 31422515 0 0 0 18.9 10.1007/s00122-020-03596-y NA NA t3659.T000595 4 Fruit shape Interval mapping, QTL mapping WI2757 × TL F2 Marker1_23166425 NA 1 26811505 0 0 0 13.9 10.1007/s00122-020-03596-y NA NA t3659.T000596 4 Fruit shape Interval mapping, QTL mapping WI2757 × TL F2 Marker1_26830768 NA 1 30581529 0 0 0 18.5 10.1007/s00122-020-03596-y NA NA t3659.T000597 4 Fruit shape Interval mapping, QTL mapping WI2757 × TL F2 Marker1_23166425 NA 1 26811505 0 0 0 16.1 10.1007/s00122-020-03596-y NA NA t3659.T000598 4 Fruit shape Interval mapping, QTL mapping WI2757 × TL F2 Marker3_20651272 NA 3 21521831 0 0 0 3.4 10.1007/s00122-020-03596-y NA NA t3659.T000599 4 Fruit shape QTL mapping WI2757 × TL F2 SSR14649 NA 3 24422117 0 0 0 2.9 10.1007/s00122-020-03596-y NA NA t3659.T000600 4 Fruit shape Interval mapping, QTL mapping WI2757 × TL F2 c3.loc112 NA 3 0 0 0 0 2.6 10.1007/s00122-020-03596-y NA NA t3659.T000601 4 Fruit shape QTL mapping WI2757 × TL F2 SSR15492 NA 6 18317278 0 0 0 2.4 10.1007/s00122-020-03596-y NA NA t3659.T000602 4 Fruit shape QTL mapping WI2757 × TL F2 UW083909 NA 6 18920412 0 0 0 2.8 10.1007/s00122-020-03596-y NA NA t3659.T000603 4 Fruit shape QTL mapping WI2757 × TL F2 UW083909 NA 6 18920412 0 0 0 4.1 10.1007/s00122-020-03596-y NA NA t3659.T000604 4 Fruit shape Interval mapping, QTL mapping WI2757 × TL F2 Marker6_24000756 NA 6 27269854 0 0 0 3.3 10.1007/s00122-020-03596-y NA NA t3659.T000605 4 Fruit shape Interval mapping, QTL mapping WI2757 × TL F2 X005F_6240376 NA 6 24050505 0 0 0 3.1 10.1007/s00122-020-03596-y NA NA t3659.T000606 4 Fruit shape Interval mapping, QTL mapping WI2757 × TL F2 Marker6_25501791 NA 6 28829673 0 0 0 3.3 10.1007/s00122-020-03596-y NA NA t3659.T000607 4 Fruit number Interval mapping, QTL mapping WI2757 × TL F2 Marker1_23166425 NA 1 26811505 0 0 0 9.9 10.1007/s00122-020-03596-y NA NA t3659.T000608 4 Fruit number Interval mapping, QTL mapping WI2757 × TL F2 Marker1_19918318 NA 1 23483836 0 0 0 10.9 10.1007/s00122-020-03596-y NA NA t3659.T000609 4 Fruit number Interval mapping, QTL mapping WI2757 × TL F2 Marker1_23166425 NA 1 26811505 0 0 0 8.3 10.1007/s00122-020-03596-y NA NA t3659.T000610 4 Fruit number Interval mapping WI2757 × TL F2 Marker3_16904206 NA 3 17347174 0 0 0 3.5 10.1007/s00122-020-03596-y NA NA t3659.T000611 4 Fruit number Interval mapping, QTL mapping WI2757 × TL F2 UW024693 NA 4 4659682 0 0 0 3.6 10.1007/s00122-020-03596-y NA NA t3659.T000612 4 Fruit number Interval mapping, QTL mapping WI2757 × TL F2 Marker5_23736665 NA 5 29407936 0 0 0 7.4 10.1007/s00122-020-03596-y NA NA t3659.T000613 4 Fruit number Interval mapping, QTL mapping WI2757 × TL F2 UW060738 NA 5 29364751 0 0 0 7.2 10.1007/s00122-020-03596-y NA NA t3659.T000614 4 Fruit number Interval mapping, QTL mapping WI2757 × TL F2 Marker6_28574238 NA 6 31888053 0 0 0 4.5 10.1007/s00122-020-03596-y NA NA t3659.T000615 4 Fruit number Interval mapping, QTL mapping WI2757 × TL F2 SSR18133 NA 7 19662205 0 0 0 3.5 10.1007/s00122-020-03596-y NA NA t3659.T000616 4 Carpel number Interval mapping, QTL mapping WI2757 × TL F2 c1.loc62 NA 1 0 0 0 0 20.6 10.1007/s00122-020-03596-y NA NA t3659.T000617 4 Carpel number Interval mapping, QTL mapping WI2757 × TL F2 c1.loc118 NA 1 0 0 0 0 36.2 10.1007/s00122-020-03596-y NA NA t3659.T000618 4 Carpel number Interval mapping, QTL mapping WI2757 × TL F2 c1.loc118 NA 1 0 0 0 0 35.6 10.1007/s00122-020-03596-y NA NA t3659.T000619 4 Carpel number Interval mapping, QTL mapping WI2757 × TL F2 Marker1_19018252 NA 1 22544635 0 0 0 6.9 10.1007/s00122-020-03596-y NA NA t3659.T000620 4 Carpel number Interval mapping, QTL mapping WI2757 × TL F2 Marker1_19018252 NA 1 22544854 0 0 0 6.4 10.1007/s00122-020-03596-y NA NA t3659.T000621 1 Powdery mildew resistance QTL mapping WI2757 × TL F2 c1.loc252 NA 1 0 0 0 0 2.6 10.1007/s00122-020-03596-y NA NA t3659.T000622 1 Powdery mildew resistance Interval mapping, QTL mapping WI2757 × TL F2 Marker1_18664549 NA 1 22175676 0 0 0 5.1 10.1007/s00122-020-03596-y NA NA t3659.T000623 1 Powdery mildew resistance Interval mapping WI2757 × TL F2 UW084366 NA 1 23877072 0 0 0 3.8 10.1007/s00122-020-03596-y NA NA t3659.T000624 1 Powdery mildew resistance Interval mapping, QTL mapping WI2757 × TL F2 Marker1_19939037 NA 1 23471205 0 0 0 4.3 10.1007/s00122-020-03596-y NA NA t3659.T000625 1 Powdery mildew resistance Interval mapping, QTL mapping WI2757 × TL F2 c2.loc86 NA 2 0 0 0 0 5.3 10.1007/s00122-020-03596-y NA NA t3659.T000626 1 Powdery mildew resistance Interval mapping, QTL mapping WI2757 × TL F2 c2.loc88 NA 2 0 0 0 0 4.6 10.1007/s00122-020-03596-y NA NA t3659.T000627 1 Powdery mildew resistance Interval mapping, QTL mapping WI2757 × TL F2 Marker2_10890264 NA 2 11062750 0 0 0 3.9 10.1007/s00122-020-03596-y NA NA t3659.T000628 1 Powdery mildew resistance QTL mapping WI2757 × TL F2 SSR06031 NA 3 34767643 0 0 0 3.3 10.1007/s00122-020-03596-y NA NA t3659.T000629 1 Powdery mildew resistance Interval mapping, QTL mapping WI2757 × TL F2 Marker3_11723798 NA 3 11755591 0 0 0 4.4 10.1007/s00122-020-03596-y NA NA t3659.T000630 1 Powdery mildew resistance QTL mapping WI2757 × TL F2 SSR15420 NA 4 19981772 0 0 0 3.9 10.1007/s00122-020-03596-y NA NA t3659.T000631 1 Powdery mildew resistance QTL mapping WI2757 × TL F2 c5.loc60 NA 5 0 0 0 0 6.2 10.1007/s00122-020-03596-y NA NA t3659.T000632 1 Powdery mildew resistance Interval mapping, QTL mapping WI2757 × TL F2 Marker5_1143496 NA 5 11848659 0 0 0 5.4 10.1007/s00122-020-03596-y NA NA t3659.T000633 1 Powdery mildew resistance Interval mapping, QTL mapping WI2757 × TL F2 Marker5_13042774 NA 5 17421976 0 0 0 3.6 10.1007/s00122-020-03596-y NA NA t3659.T000634 1 Powdery mildew resistance Interval mapping, QTL mapping WI2757 × TL F2 UW084570 NA 5 21307329 0 0 0 2.5 10.1007/s00122-020-03596-y NA NA t3659.T000635 1 Powdery mildew resistance Interval mapping, QTL mapping WI2757 × TL F2 UW084570 NA 5 21307329 0 0 0 6.2 10.1007/s00122-020-03596-y NA NA t3659.T000636 1 Powdery mildew resistance Interval mapping, QTL mapping WI2757 × TL F2 UW084844 NA 5 22786622 0 0 0 7.3 10.1007/s00122-020-03596-y NA NA t3659.T000637 1 Powdery mildew resistance Interval mapping, QTL mapping WI2757 × TL F2 UW084844 NA 5 22786622 0 0 0 3.8 10.1007/s00122-020-03596-y NA NA t3659.T000638 1 Powdery mildew resistance Interval mapping, QTL mapping WI2757 × TL F2 UW084553 NA 5 30194516 0 0 0 13.2 10.1007/s00122-020-03596-y NA NA t3659.T000639 1 Powdery mildew resistance Interval mapping, QTL mapping WI2757 × TL F2 c5.loc156 NA 5 0 0 0 0 3.6 10.1007/s00122-020-03596-y NA NA t3659.T000640 1 Powdery mildew resistance Interval mapping, QTL mapping WI2757 × TL F2 UW084553 NA 5 30194516 0 0 0 21.7 10.1007/s00122-020-03596-y NA NA t3659.T000641 1 Powdery mildew resistance Interval mapping, QTL mapping WI2757 × TL F2 Marker5_23736665 NA 5 29407936 0 0 0 21.9 10.1007/s00122-020-03596-y NA NA t3659.T000642 1 Powdery mildew resistance Interval mapping, QTL mapping WI2757 × TL F2 c5.loc156 NA 5 0 0 0 0 16.7 10.1007/s00122-020-03596-y NA NA t3659.T000643 1 Powdery mildew resistance Interval mapping, QTL mapping WI2757 × TL F2 UW083909 NA 6 18920412 0 0 0 3.1 10.1007/s00122-020-03596-y NA NA t3659.T000644 1 Powdery mildew resistance QTL mapping WI2757 × TL F2 UW039897 NA 6 20587347 0 0 0 2.9 10.1007/s00122-020-03596-y NA NA t3659.T000645 1 Low temperature tolerance QTL mapping CG104 × CG37 F2 SSR02810 NA 0 0 SSR16881 0 0 18.5 3.6 10.3389/fpls.2019.01620 NA NA t3659.T000646 1 Low temperature tolerance QTL mapping CG104 × CG37 F2 SSR15592 NA 0 0 CSJST35 0 0 66.9 4.4 10.3389/fpls.2019.01620 NA NA t3659.T000647 1 Low temperature tolerance QTL mapping CG104 × CG37 F2 SSR14290 NA 0 0 SSR01331 0 0 63.1 6.4 10.3389/fpls.2019.01620 NA NA t3659.T000648 1 Low temperature tolerance QTL mapping CG104 × CG37 F2 SSR21885 NA 0 0 SSR14859 0 0 113.2 18.2 10.3389/fpls.2019.01620 NA NA t3659.T000649 1 Low temperature tolerance QTL mapping CG104 × CG37 F2 SSR15592 NA 0 0 SSR20165 0 0 66.9 6 10.3389/fpls.2019.01620 NA NA t3659.T000650 1 Low temperature tolerance QTL mapping CG104 × CG37 F2 SSR14290 NA 0 0 SSR01331 0 0 63.1 7.8 10.3389/fpls.2019.01620 NA NA t3659.T000651 1 Low temperature tolerance QTL mapping CG104 × CG37 F2 SSR21885 NA 0 0 SSR14859 0 0 113.2 16.8 10.3389/fpls.2019.01620 NA NA t3659.T000652 4 Fruit neck length QTL mapping Jin5-508 × YN InDel05 NA Chr7 12 0 SNP01 Chr7 15 0 5.4-9 10.1111/pbi.13326 NA NA t3659.T000653 sh1 4 Short hypocotyl1 SWCC8 dCAPS-51 NA 3 9286025 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000654 cul-1 4 Curly leaf1 CCMC1561 CAPS-C1561-01 NA 6 28494600 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000655 cul-2 4 Curly leaf2 CCMCC1134 dCAPS-C1134-01 NA 6 28494600 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000656 ll 4 Littleleaf H19 ll-dCAPS2 NA 6 7662821 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000657 ll-2 4 Littleleaf -2 XF-24 (Cucumis sativus InDel-4 NA 7 0 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000658 Psm 4 Paternal sorting of mitochondria Cucumis sativus var. ha BsaWI NA 3 32575257 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000659 rl-1 4 Round leaf1 CCMCC356 rl-1SNP NA 1 19389180 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000660 rl-2 4 Round leaf2 CCMCC949 rl-2SNP NA 1 19389177 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000661 rl 4 Round leaf CCMCrl NA 1 19389144 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000662 scl-1 4 Small and cordate leaf 406scl1 SNP7G3596452 NA 7 3596452 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000663 vl 4 variegated leaf Unknown NA 6 18 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000664 v-1 4 Virescent leaf 1 9110Gt v1SSR8 NA 6 10094568 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000665 vyl 4 Virescent yellow leaf CCMCvyl NA 4 20695774 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000666 yp 4 Yellow plant CCMCC528 ypSNPC-T NA 6 27511194 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000667 ten 4 Tendril-less CG9192 rSNP1-dCAPs NA 5 27045330 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000668 td-1 4 tendrilles-1 CCMCB007 NWdCAPS353 NA 6 28883361 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000669 cp 4 compact High wire NA 6 12675251 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000670 cp-1 4 compact1 PI308915 (WI7201) CKX-indel NA 4 22 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000671 si 4 short internode 406si SNP4G21398058 NA 4 21398058 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000672 scp-1 4 Super compact1 CCMCC257 P450-dCAPS NA 5 26718684 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000673 scp-2 4 Super compact2 AM204M S433755 NA 3 27762276 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000674 gl1 4 Glabrous1 Daqingbagl1 Gl1g NA 3 29041903 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000675 mict 4 Micro-trichome North China inbred line Gl1g NA 3 29041903 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000676 gl2 4 Glabrous2 NCG042 SSR10522 NA 2 15 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000677 gl3 4 Glabrous3 NCG157 InDel-19 NA 6 26734859 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000678 gl3 4 Glabrous3 WI7412 GL3_2 NA 6 26734859 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000679 tril 4 Trichome-less CGN19839 (Teplicnyi A P1 NA 6 26734859 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000680 gl4 4 glabrous4 406gl2 APS-SNP7 NA 1 6 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000681 els 4 Extra long sepal 406els SNP4G7741482 NA 4 7741482 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000682 qef1.1 4 Early flowering time Muromskij NA 1 25850971 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000683 ms-3 4 Male sterility YL-5 A806246C NA 3 806246 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000684 A 4 Androecious Erez A81/A85 NA 2 16345626 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000685 a-1 4 Androecious-1 406a SNP6G26464719 NA 6 26464719 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000686 m 4 Andromonoecious H34 S_ME8SA7 NA 1 21855870 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000687 m-1 4 Andromonoecious H38 CsACS2_CDS NA 1 21938479 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000688 F 4 Femaleness CsACS1.2s NA 6 24245649 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000689 sgy 4 sub-gynoecious S-2-98 C3D2 NA 3 12 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000690 up 4 upward-pedicel C-8-6up Indel-CsUp NA 1 19204081 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000691 cn 4 Carpel number TrueLemon CN_D1 NA 1 10551968 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000692 qfs1.2 4 Fruit size1.2 WI7239 Sun_indel NA 1 21748440 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000693 qfs2.1 4 Fruit size2.1 WI7239 Xl2snp10* NA 2 11042204 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000694 ful 4 Fruitfull Many Cultivars NA 1 3960104 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000695 mf 4 Mango fruit AM218(Extra Early Maj UW026993 NA 1 4494646 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000696 sf-1 4 Short fruit-1 CNS2sf1 STS1 NA 6 12 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000697 sf-2 4 Short fruit -2 406sf1 Chr2-9983495-dcaps NA 2 9983495 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000698 qfth2.1 4 Fruit flesh thickness2.1 XUE1, Pepino, Jin5-508, NA 2 4 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000699 ore 4 Orange flesh CG9164 SNP3G12845300 NA 3 12845300 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000700 yf 4 Yellow flesh PI200815 yfSSR108 NA 7 15 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000701 B 4 Black spine WI7200 MYB-1dCAPS NA 4 620189 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000702 fs1 4 Few spines CNS2CNS5 MM3 NA 6 26734859 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000703 ns 4 Numerous spines NCG122 nsIndel54 NA 2 12795994 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000704 tsp 4 tender spines NC073 NA 1 6245947 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000705 H 4 Heavy netting 9110Gt NA 5 20 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000706 Pe 4 Palisade epidermis NCG121 SSR14611 NA 5 20 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000707 lgf 4 Light green fruit 406lgf SNP6G9285631 NA 6 9285631 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000708 lgp 4 Light green peel 406lgp SNP7G3286953 NA 7 3286953 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000709 u 4 Uniform immature fruit color S94, S98 SSR27 NA 5 20 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000710 w 4 White skin color Q24 pan3925 NA 3 39257726 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000711 ygp 4 Yellow green peel ygp SNP16324218 NA 2 16323852 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000712 Ts1 4 Tubercle size DRT468 YS-1 NA 5 18474911 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000713 Tu 4 Warty S52 C3 NA 5 20292161 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000714 D 4 Dull fruit skin S94, S52 SSR37 NA 5 21 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000715 qARN6.1 4 Adventitious root number (ARN) Zaoer-N SNP02 NA 6 25496855 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000716 psl 1 Resistance to Pseudomonas syringae pv. Lachrymans (ALS) Gy14/WI2757 SNP08 NA 5 5462918 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000717 pm1.1 1 Powdery mildew resistance (PM) Jin5-508 SNP09 NA 1 7 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000718 pm-s 1 Powdery mildew resistance (PM) NCG-122/WI2757 pmSSR27 NA 5 25 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000719 pm5.3 1 Powdery mildew resistance (PM) IL52 (C. Hystrix ) SNP6 NA 5 25 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000720 pm 1 Powdery mildew resistance (PM) S1003 N7F-N14R NA 5 24831373 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000721 pm 1 Powdery mildew resistance (PM) R077 NA 5 24831373 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000722 pm 1 Powdery mildew resistance (PM) PI 197088 NA 5 24831373 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000723 ccu 1 Resistance to Cladosporium cucumerinum (Scab) 9110Gt SSR17631 NA 2 3 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000724 cla 1 Resistance to Colletotrichum lagenarium (Anthracnose) Gy14/WI2757 SNP08 NA 5 5462918 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000725 cca-2 1 Resistance to Corynespora cassiicola ( TLS) PI183967(Cucumis sati SSR21318 NA 6 9 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000726 cca-3 1 Resistance to Corynespora cassiicola ( TLS) D31 6M375730_NonsynSNP1 NA 6 16936147 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000727 cca-1 1 Resistance to Corynespora cassiicola (TLS) Q5 CSFR33 NA 6 15 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000728 Foc 1 Resistance to Fusarium oxysporum f. sp. Cucumerinum (Fusa 9110Gt SSR17631 NA 2 3 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000729 dm 1 Resistance to Pseudoperonospora cubensis (DM) Gy14/WI2757 SNP08 NA 5 5462918 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000730 dm4.1 1 Resistance to Pseudoperonospora cubensis (DM) WI7120 CsDM4-066 NA 4 15 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000731 dm5.2 1 Resistance to Pseudoperonospora cubensis (DM) WI7120 CsDM4-055 NA 5 16 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000732 cmv6.1 1 Resistance to cucumber mosaic virus (CMV) 2245 SSR9-56 NA 6 8 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000733 PRSV 1 Resistance to Papaya ringspot virus (PRSV) 2245 SSR11-177 NA 6 9 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000734 wmv 1 Resistance to watermelon mosaic virus (WMV) 2245 SSRWMV60-23 NA 6 19 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000735 zym 1 Resistance to Zucchini Yellow Mosaic Virus (ZYMV) A192-18, Dina, TMG-1 CAPS-T86C NA 6 10850939 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000736 bt 4 bitter fruit PI 183967 NA 5 5513390 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000737 bl 4 bitter leaf XY-3; E3-231 NA 5 5489366 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000738 bi 4 bitterfree 9110Gt; CG7744 NA 6 6088655 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000739 fgr 4 Fragrance PK2011T202 CsBADH2-A1 NA 1 162652 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000740 1 Resistance to powdery mildew PI 197088 NA 1 5876498 0 1 22503767 0 10.1038/s41438-019-0226-3 NA NA t3659.T000741 1 Resistance to powdery mildew PI 197088 NA 1 8222187 0 1 22234860 0 10.1038/s41438-019-0226-3 NA NA t3659.T000742 1 Resistance to powdery mildew WI 2757 NA 1 2163238 0 1 17722258 0 10.1038/s41438-019-0226-3 NA NA t3659.T000743 1 Resistance to powdery mildew S06 NA 1 17250996 0 1 23465958 0 10.1038/s41438-019-0226-3 NA NA t3659.T000744 1 Resistance to powdery mildew WI 2757 NA 1 18577265 0 1 21339881 0 10.1038/s41438-019-0226-3 NA NA t3659.T000745 1 Resistance to powdery mildew PI 197088 NA 1 22234860 0 1 25397685 0 10.1038/s41438-019-0226-3 NA NA t3659.T000746 1 Resistance to powdery mildew H136 NA 1 23500000 0 1 24500000 0 10.1038/s41438-019-0226-3 NA NA t3659.T000747 1 Resistance to powdery mildew PI 197088 NA 1 28477693 0 1 32220160 0 10.1038/s41438-019-0226-3 NA NA t3659.T000748 1 Resistance to powdery mildew PI 197088 NA 2 8638158 0 2 13134937 0 10.1038/s41438-019-0226-3 NA NA t3659.T000749 1 Resistance to powdery mildew PI 197088 NA 2 14949352 0 2 15870243 0 10.1038/s41438-019-0226-3 NA NA t3659.T000750 1 Resistance to powdery mildew PI 197088 NA 3 992960 0 3 5926467 0 10.1038/s41438-019-0226-3 NA NA t3659.T000751 1 Resistance to powdery mildew WI 2757 NA 3 26651364 0 3 36926708 0 10.1038/s41438-019-0226-3 NA NA t3659.T000752 1 Resistance to powdery mildew S06 NA 4 8006703 0 4 9002834 0 10.1038/s41438-019-0226-3 NA NA t3659.T000753 1 Resistance to powdery mildew WI 2757 NA 4 10211019 0 4 22100020 0 10.1038/s41438-019-0226-3 NA NA t3659.T000754 1 Resistance to powdery mildew PI 197088 NA 4 22517248 0 4 30262032 0 10.1038/s41438-019-0226-3 NA NA t3659.T000755 1 Resistance to powdery mildew K8 NA 5 11801331 0 5 20837862 0 10.1038/s41438-019-0226-3 NA NA t3659.T000756 1 Resistance to powdery mildew S06 NA 5 11282605 0 5 16961924 0 10.1038/s41438-019-0226-3 NA NA t3659.T000757 1 Resistance to powdery mildew PI 197088 NA 5 16961924 0 5 20847180 0 10.1038/s41438-019-0226-3 NA NA t3659.T000758 1 Resistance to powdery mildew WI 2757 NA 5 21395304 0 5 24124874 0 10.1038/s41438-019-0226-3 NA NA t3659.T000759 1 Resistance to powdery mildew PI 197088 NA 5 27072020 0 5 31877374 0 10.1038/s41438-019-0226-3 NA NA t3659.T000760 1 Resistance to powdery mildew WI 2757 NA 5 29379472 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000761 1 Resistance to powdery mildew K8 NA 5 27819449 0 5 29369915 0 10.1038/s41438-019-0226-3 NA NA t3659.T000762 1 Resistance to powdery mildew WI 2757 NA 5 27072020 0 5 30877374 0 10.1038/s41438-019-0226-3 NA NA t3659.T000763 1 Resistance to powdery mildew PI 197088 NA 5 27688515 0 5 33372091 0 10.1038/s41438-019-0226-3 NA NA t3659.T000764 1 Resistance to powdery mildew PI 197088 NA 5 30344255 0 5 31930132 0 10.1038/s41438-019-0226-3 NA NA t3659.T000765 1 Resistance to powdery mildew IL52 NA 5 30247005 0 5 30714150 0 10.1038/s41438-019-0226-3 NA NA t3659.T000766 1 Resistance to powdery mildew PI 197088 NA 5 399606 0 5 3704782 0 10.1038/s41438-019-0226-3 NA NA t3659.T000767 1 Resistance to powdery mildew PI 197088 NA 6 5309327 0 6 17894771 0 10.1038/s41438-019-0226-3 NA NA t3659.T000768 1 Resistance to powdery mildew H136 NA 6 21000000 0 6 22000000 0 10.1038/s41438-019-0226-3 NA NA t3659.T000769 1 Resistance to powdery mildew PI 197088 NA 6 803780 0 6 21455099 0 10.1038/s41438-019-0226-3 NA NA t3659.T000770 1 Resistance to powdery mildew S06 NA 6 27052131 0 6 27270372 0 10.1038/s41438-019-0226-3 NA NA t3659.T000771 1 Resistance to powdery mildew K8 NA 6 27734744 0 6 27799589 0 10.1038/s41438-019-0226-3 NA NA t3659.T000772 1 Resistance to powdery mildew PI 197088 NA 6 27144746 0 6 29819946 0 10.1038/s41438-019-0226-3 NA NA t3659.T000773 1 Resistance to powdery mildew PI 197088 NA 7 12961521 0 7 13520827 0 10.1038/s41438-019-0226-3 NA NA t3659.T000774 1 Resistance to downy mildew S94 NA 1 2163238 0 1 10024077 0 10.1038/s41438-019-0226-3 NA NA t3659.T000775 1 Resistance to downy mildew K8 NA 1 2135801 0 1 4753038 0 10.1038/s41438-019-0226-3 NA NA t3659.T000776 1 Resistance to downy mildew PI 197088 NA 1 1093041 0 1 5876498 0 10.1038/s41438-019-0226-3 NA NA t3659.T000777 1 Resistance to downy mildew CCMC, IL52 NA 1 1205471 0 1 3115794 0 10.1038/s41438-019-0226-3 NA NA t3659.T000778 1 Resistance to downy mildew PI 197088 NA 1 8761340 0 1 18377790 0 10.1038/s41438-019-0226-3 NA NA t3659.T000779 1 Resistance to downy mildew CCMC, IL52 NA 1 8761340 0 1 16421791 0 10.1038/s41438-019-0226-3 NA NA t3659.T000780 1 Resistance to downy mildew PI 197088 NA 1 22234860 0 1 24873748 0 10.1038/s41438-019-0226-3 NA NA t3659.T000781 1 Resistance to downy mildew PI 197088 NA 1 19102866 0 1 30206683 0 10.1038/s41438-019-0226-3 NA NA t3659.T000782 1 Resistance to downy mildew PI 197088 NA 1 18617607 0 1 27582938 0 10.1038/s41438-019-0226-3 NA NA t3659.T000783 1 Resistance to downy mildew CCMC, IL52 NA 1 23626789 0 1 25436487 0 10.1038/s41438-019-0226-3 NA NA t3659.T000784 1 Resistance to downy mildew PI 197088 NA 2 4145724 0 2 6300028 0 10.1038/s41438-019-0226-3 NA NA t3659.T000785 1 Resistance to downy mildew WI7120 NA 2 5846714 0 2 11865405 0 10.1038/s41438-019-0226-3 NA NA t3659.T000786 1 Resistance to downy mildew TH118FLM NA 2 6515685 0 2 10440388 0 10.1038/s41438-019-0226-3 NA NA t3659.T000787 1 Resistance to downy mildew PI 197088 NA 2 8085485 0 2 10959944 0 10.1038/s41438-019-0226-3 NA NA t3659.T000788 1 Resistance to downy mildew TH118FLM NA 2 29652065 0 2 30141478 0 10.1038/s41438-019-0226-3 NA NA t3659.T000789 1 Resistance to downy mildew PI 197088 NA 2 31235691 0 2 33294188 0 10.1038/s41438-019-0226-3 NA NA t3659.T000790 1 Resistance to downy mildew PI 197088 NA 3 1122921 0 3 5926467 0 10.1038/s41438-019-0226-3 NA NA t3659.T000791 1 Resistance to downy mildew PI 197088 NA 3 8049881 0 3 11937537 0 10.1038/s41438-019-0226-3 NA NA t3659.T000792 1 Resistance to downy mildew PI 197088 NA 3 9186866 0 3 10272645 0 10.1038/s41438-019-0226-3 NA NA t3659.T000793 1 Resistance to downy mildew PI 197088 NA 3 10578869 0 3 14966371 0 10.1038/s41438-019-0226-3 NA NA t3659.T000794 1 Resistance to downy mildew PI 197088 NA 3 38606402 0 3 41586177 0 10.1038/s41438-019-0226-3 NA NA t3659.T000795 1 Resistance to downy mildew WI7120 NA 4 21737195 0 4 23007082 0 10.1038/s41438-019-0226-3 NA NA t3659.T000796 1 Resistance to downy mildew PI 197088 NA 4 21589735 0 4 23442656 0 10.1038/s41438-019-0226-3 NA NA t3659.T000797 1 Resistance to downy mildew PI 197088 NA 4 22226625 0 4 28307174 0 10.1038/s41438-019-0226-3 NA NA t3659.T000798 1 Resistance to downy mildew PI 197088 NA 4 5095210 0 4 27700438 0 10.1038/s41438-019-0226-3 NA NA t3659.T000799 1 Resistance to downy mildew WI2757 NA 5 2148763 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000800 1 Resistance to downy mildew S94 NA 5 11282605 0 5 14799230 0 10.1038/s41438-019-0226-3 NA NA t3659.T000801 1 Resistance to downy mildew S94 NA 5 7722007 0 5 11524398 0 10.1038/s41438-019-0226-3 NA NA t3659.T000802 1 Resistance to downy mildew PI 197088 NA 5 399606 0 5 6866682 0 10.1038/s41438-019-0226-3 NA NA t3659.T000803 1 Resistance to downy mildew PI 197085 NA 5 3483981 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000804 1 Resistance to downy mildew TH118FLM NA 5 6598911 0 5 19170007 0 10.1038/s41438-019-0226-3 NA NA t3659.T000805 1 Resistance to downy mildew PI 197088 NA 5 2656332 0 5 11013650 0 10.1038/s41438-019-0226-3 NA NA t3659.T000806 1 Resistance to downy mildew PI 197088 NA 5 7722007 0 5 11524398 0 10.1038/s41438-019-0226-3 NA NA t3659.T000807 1 Resistance to downy mildew CCMC, IL52 NA 5 920109 0 5 3291619 0 10.1038/s41438-019-0226-3 NA NA t3659.T000808 1 Resistance to downy mildew PI 197088 NA 5 17923802 0 5 23783970 0 10.1038/s41438-019-0226-3 NA NA t3659.T000809 1 Resistance to downy mildew K8 NA 5 20837862 0 5 27819449 0 10.1038/s41438-019-0226-3 NA NA t3659.T000810 1 Resistance to downy mildew PI 197088 NA 5 22362864 0 5 26221218 0 10.1038/s41438-019-0226-3 NA NA t3659.T000811 1 Resistance to downy mildew PI 197085 NA 5 27819449 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000812 1 Resistance to downy mildew WI7120 NA 5 17923802 0 5 23599240 0 10.1038/s41438-019-0226-3 NA NA t3659.T000813 1 Resistance to downy mildew PI 197088 NA 5 22016973 0 5 23783970 0 10.1038/s41438-019-0226-3 NA NA t3659.T000814 1 Resistance to downy mildew WI2757 NA 5 21649393 0 5 23017114 0 10.1038/s41438-019-0226-3 NA NA t3659.T000815 1 Resistance to downy mildew PI 197088 NA 5 27819449 0 5 33372091 0 10.1038/s41438-019-0226-3 NA NA t3659.T000816 1 Resistance to downy mildew PI 197085 NA 5 31258717 0 5 33209500 0 10.1038/s41438-019-0226-3 NA NA t3659.T000817 1 Resistance to downy mildew PI 197088 NA 5 28001113 0 5 28725975 0 10.1038/s41438-019-0226-3 NA NA t3659.T000818 1 Resistance to downy mildew PI 197088 NA 5 30603948 0 5 31930132 0 10.1038/s41438-019-0226-3 NA NA t3659.T000819 1 Resistance to downy mildew CCMC, IL52 NA 5 28328355 0 5 31451421 0 10.1038/s41438-019-0226-3 NA NA t3659.T000820 1 Resistance to downy mildew PI 197088 NA 6 3725502 0 6 5919221 0 10.1038/s41438-019-0226-3 NA NA t3659.T000821 1 Resistance to downy mildew PI 197088 NA 6 9340981 0 6 10801545 0 10.1038/s41438-019-0226-3 NA NA t3659.T000822 1 Resistance to downy mildew WI7120 NA 6 15864566 0 6 24100408 0 10.1038/s41438-019-0226-3 NA NA t3659.T000823 1 Resistance to downy mildew K8 NA 6 30502961 0 6 31132697 0 10.1038/s41438-019-0226-3 NA NA t3659.T000824 1 Resistance to downy mildew WI7120 NA 6 29280558 0 6 31406890 0 10.1038/s41438-019-0226-3 NA NA t3659.T000825 1 Resistance to downy mildew PI 197088 NA 6 27501170 0 6 31289674 0 10.1038/s41438-019-0226-3 NA NA t3659.T000826 1 Resistance to downy mildew CCMC, IL52 NA 6 26616358 0 6 29525708 0 10.1038/s41438-019-0226-3 NA NA t3659.T000827 1 Resistance to downy mildew PI 197088 NA 7 21960482 0 7 23752082 0 10.1038/s41438-019-0226-3 NA NA t3659.T000828 1 Resistance to Angular Leaf Spot WI2757 NA 1 16875551 0 1 21339881 0 10.1038/s41438-019-0226-3 NA NA t3659.T000829 1 Resistance to Angular Leaf Spot WI2757 NA 3 187602 0 3 21276896 0 10.1038/s41438-019-0226-3 NA NA t3659.T000830 1 Resistance to Angular Leaf Spot WI2757 NA 5 2148763 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000831 1 Resistance to Fusarium Wilt (FOC) 9110Gt NA 2 1718098 0 2 3296126 0 10.1038/s41438-019-0226-3 NA NA t3659.T000832 1 Resistance to Fusarium Wilt (FOC) NA 3 7026091 0 3 9513596 0 10.1038/s41438-019-0226-3 NA NA t3659.T000833 1 Resistance to Fusarium Wilt (FOC) NA 5 26527434 0 5 28923227 0 10.1038/s41438-019-0226-3 NA NA t3659.T000834 1 Resistance to Gummy Stem Blight PI 183967 NA 1 3964883 0 1 4753038 0 10.1038/s41438-019-0226-3 NA NA t3659.T000835 1 Resistance to Gummy Stem Blight PI 183967 NA 2 28221008 0 2 28901964 0 10.1038/s41438-019-0226-3 NA NA t3659.T000836 1 Resistance to Gummy Stem Blight PI 183967 NA 3 2537873 0 3 1277998 0 10.1038/s41438-019-0226-3 NA NA t3659.T000837 1 Resistance to Gummy Stem Blight PI 183967 NA 3 4450728 0 3 6851726 0 10.1038/s41438-019-0226-3 NA NA t3659.T000838 1 Resistance to Gummy Stem Blight PI 183967 NA 4 20241667 0 4 21603802 0 10.1038/s41438-019-0226-3 NA NA t3659.T000839 1 Resistance to Gummy Stem Blight HH1-8-1-2 NA 4 22430156 0 4 23641548 0 10.1038/s41438-019-0226-3 NA NA t3659.T000840 1 Resistance to Gummy Stem Blight PI 183967 NA 5 21932201 0 5 23077375 0 10.1038/s41438-019-0226-3 NA NA t3659.T000841 1 Resistance to Gummy Stem Blight PI 183967 NA 6 3895743 0 6 5175677 0 10.1038/s41438-019-0226-3 NA NA t3659.T000842 1 Resistance to Gummy Stem Blight PI 183967 NA 6 25541098 0 6 26616358 0 10.1038/s41438-019-0226-3 NA NA t3659.T000843 1 Resistance to Gummy Stem Blight HH1-8-1-2 NA 6 27734744 0 6 31142382 0 10.1038/s41438-019-0226-3 NA NA t3659.T000844 1 Resistance to Melon Yellow Spot Virus Tokiwa NA 1 1315863 0 1 6041674 0 10.1038/s41438-019-0226-3 NA NA t3659.T000845 1 Resistance to Melon Yellow Spot Virus Tokiwa NA 3 5926467 0 3 12326572 0 10.1038/s41438-019-0226-3 NA NA t3659.T000846 1 Resistance to Melon Yellow Spot Virus Tokiwa NA 4 10211019 0 4 26166864 0 10.1038/s41438-019-0226-3 NA NA t3659.T000847 1 Resistance to Melon Yellow Spot Virus Tokiwa NA 7 12693676 0 7 1723853 0 10.1038/s41438-019-0226-3 NA NA t3659.T000848 1 Resistance to Cucurbit yellow stunting disorder virus PI 250147 NA 5 27072020 0 5 32312548 0 10.1038/s41438-019-0226-3 NA NA t3659.T000849 4 Low Temp Germination 065 x 02245 RILs NA 1 18235527 0 1 18827538 0 10.1038/s41438-019-0226-3 NA NA t3659.T000850 4 Low Temp Germination PI197088 x Coolgreen RILs NA 1 20227716 0 1 22939356 0 10.1038/s41438-019-0226-3 NA NA t3659.T000851 4 Low Temp Germination 065 x 02245 RILs NA 2 6206616 0 2 8846704 0 10.1038/s41438-019-0226-3 NA NA t3659.T000852 4 Low Temp Germination PI197088 x Coolgreen RILs NA 2 6601244 0 2 12748543 0 10.1038/s41438-019-0226-3 NA NA t3659.T000853 4 Low Temp Germination 065 x 02245 RILs NA 4 1078420 0 4 4109826 0 10.1038/s41438-019-0226-3 NA NA t3659.T000854 4 Low Temp Germination PI197088 x Coolgreen RILs NA 4 2363079 0 4 4184374 0 10.1038/s41438-019-0226-3 NA NA t3659.T000855 1 Waterlogging tolerance Zaoer-N x Pepino F2:3 NA 3 8800332 0 3 12981178 0 10.1038/s41438-019-0226-3 NA NA t3659.T000856 1 Waterlogging tolerance Zaoer-N x Pepino F2:3 NA 5 20275230 0 5 21836204 0 10.1038/s41438-019-0226-3 NA NA t3659.T000857 1 Waterlogging tolerance Zaoer-N x Pepino F2:3 NA 6 28101160 0 6 29678065 0 10.1038/s41438-019-0226-3 NA NA t3659.T000858 4 Hypocotyl PI 183967 x 931 RILs NA 1 27367230 0 1 29537810 0 10.1038/s41438-019-0226-3 NA NA t3659.T000859 4 Hypocotyl PI 183967 x 931 RILs NA 2 10842002 0 2 16266343 0 10.1038/s41438-019-0226-3 NA NA t3659.T000860 4 Hypocotyl PI 183967 x 931 RILs NA 3 3068319 0 3 7680267 0 10.1038/s41438-019-0226-3 NA NA t3659.T000861 4 Hypocotyl PI 183967 x 931 RILs NA 3 27203767 0 3 29471880 0 10.1038/s41438-019-0226-3 NA NA t3659.T000862 4 Hypocotyl 9110Gt x 9930 RILs NA 5 24601636 0 5 26431293 0 10.1038/s41438-019-0226-3 NA NA t3659.T000863 4 Hypocotyl PI 183967 x 931 RILs NA 5 23964780 0 5 24325543 0 10.1038/s41438-019-0226-3 NA NA t3659.T000864 4 Hypocotyl PI 183967 x 931 RILs NA 6 23915023 0 6 24417940 0 10.1038/s41438-019-0226-3 NA NA t3659.T000865 4 Hypocotyl 9110Gt x 9930 RILs NA 6 27227724 0 6 31212546 0 10.1038/s41438-019-0226-3 NA NA t3659.T000866 4 Cotyledon PI 183967 x 931 RILs NA 1 20986721 0 1 22208649 0 10.1038/s41438-019-0226-3 NA NA t3659.T000867 4 Cotyledon 9110Gt x 9930 RILs NA 1 27367230 0 1 28141503 0 10.1038/s41438-019-0226-3 NA NA t3659.T000868 4 Cotyledon PI 183967 x 931 RILs NA 2 16266343 0 2 28221008 0 10.1038/s41438-019-0226-3 NA NA t3659.T000869 4 Cotyledon 9110Gt x 9930 RILs NA 3 12985410 0 3 18907727 0 10.1038/s41438-019-0226-3 NA NA t3659.T000870 4 Cotyledon PI 183967 x 931 RILs NA 3 29471880 0 3 30007125 0 10.1038/s41438-019-0226-3 NA NA t3659.T000871 4 Cotyledon 9110Gt x 9930 RILs NA 5 17380728 0 5 20738763 0 10.1038/s41438-019-0226-3 NA NA t3659.T000872 4 Cotyledon PI 183967 x 931 RILs NA 5 23964780 0 5 24325543 0 10.1038/s41438-019-0226-3 NA NA t3659.T000873 4 Cotyledon PI 183967 x 931 RILs NA 5 23077375 0 5 24325543 0 10.1038/s41438-019-0226-3 NA NA t3659.T000874 4 Cotyledon 9110Gt x 9930 RILs NA 6 10164647 0 6 10371235 0 10.1038/s41438-019-0226-3 NA NA t3659.T000875 4 Cotyledon PI 183967 x 931 RILs NA 6 10767736 0 6 24903405 0 10.1038/s41438-019-0226-3 NA NA t3659.T000876 4 Cotyledon PI 183967 x 931 RILs NA 6 28929238 0 6 29796138 0 10.1038/s41438-019-0226-3 NA NA t3659.T000877 4 Leaf PI 183967 x 931 RILs NA 1 10000000 0 1 18000000 0 10.1038/s41438-019-0226-3 NA NA t3659.T000878 4 Leaf PI 183967 x 931 RILs NA 2 5000000 0 2 8000000 0 10.1038/s41438-019-0226-3 NA NA t3659.T000879 4 Leaf PI 183967 x 931 RILs NA 2 27000000 0 2 29000000 0 10.1038/s41438-019-0226-3 NA NA t3659.T000880 4 Leaf PI 183967 x 931 RILs NA 5 21932201 0 5 23964780 0 10.1038/s41438-019-0226-3 NA NA t3659.T000881 4 Leaf PI 183967 x 931 RILs NA 6 28929238 0 6 29796138 0 10.1038/s41438-019-0226-3 NA NA t3659.T000882 4 Vine 9110Gt x 9930 RILs NA 1 28305239 0 1 29537810 0 10.1038/s41438-019-0226-3 NA NA t3659.T000883 4 Vine 9110Gt x 9930 RILs NA 2 107777 0 2 1718098 0 10.1038/s41438-019-0226-3 NA NA t3659.T000884 4 Vine 9110Gt x 9930 RILs NA 5 4521925 0 5 20738763 0 10.1038/s41438-019-0226-3 NA NA t3659.T000885 4 Vine 9110Gt x 9930 RILs NA 6 13360586 0 6 22022192 0 10.1038/s41438-019-0226-3 NA NA t3659.T000886 4 Vine 9110Gt x 9930 RILs NA 1 27367230 0 1 28141503 0 10.1038/s41438-019-0226-3 NA NA t3659.T000887 4 Vine 9110Gt x 9930 RILs NA 1 27367230 0 1 28141503 0 10.1038/s41438-019-0226-3 NA NA t3659.T000888 4 Vine 9110Gt x 9930 RILs NA 6 17987073 0 6 22022192 0 10.1038/s41438-019-0226-3 NA NA t3659.T000889 4 Biomass PI 183967 x 931 RILs NA 2 33265440 0 2 33805588 0 10.1038/s41438-019-0226-3 NA NA t3659.T000890 4 Biomass PI 183967 x 931 RILs NA 5 11489566 0 5 17383838 0 10.1038/s41438-019-0226-3 NA NA t3659.T000891 4 Biomass PI 183967 x 931 RILs NA 5 21932201 0 5 23077375 0 10.1038/s41438-019-0226-3 NA NA t3659.T000892 4 Biomass PI 183967 x 931 RILs NA 6 10767736 0 6 17894771 0 10.1038/s41438-019-0226-3 NA NA t3659.T000893 4 Branch S94 x S06 RILs NA 1 3435063 0 1 8393188 0 10.1038/s41438-019-0226-3 NA NA t3659.T000894 4 Branch S94 x S06 RILs NA 1 28341342 0 1 31105895 0 10.1038/s41438-019-0226-3 NA NA t3659.T000895 4 Branch S94 x S06 RILs NA 3 4419164 0 3 5339800 0 10.1038/s41438-019-0226-3 NA NA t3659.T000896 4 Branch S94 x S06 RILs NA 6 10767736 0 6 19391504 0 10.1038/s41438-019-0226-3 NA NA t3659.T000897 4 Branch S94 x S06 RILs NA 6 22994885 0 6 27270372 0 10.1038/s41438-019-0226-3 NA NA t3659.T000898 4 Branch S94 x S06 RILs NA 7 3274145 0 7 11236180 0 10.1038/s41438-019-0226-3 NA NA t3659.T000899 4 Flowering time S94 x S06 RILs NA 1 465777 0 1 3986626 0 10.1038/s41438-019-0226-3 NA NA t3659.T000900 4 Flowering time S94 x S06 RILs NA 1 16607265 0 1 20239737 0 10.1038/s41438-019-0226-3 NA NA t3659.T000901 4 Flowering time S94 x S06 RILs NA 1 28341342 0 1 31105895 0 10.1038/s41438-019-0226-3 NA NA t3659.T000902 4 Flowering time S94 x S06 RILs NA 2 27346384 0 2 28646256 0 10.1038/s41438-019-0226-3 NA NA t3659.T000903 4 Flowering time S94 x S06 RILs NA 3 0 0 3 187602 0 10.1038/s41438-019-0226-3 NA NA t3659.T000904 4 Flowering time 9110Gt x 9930 RILs NA 3 12985410 0 3 15722557 0 10.1038/s41438-019-0226-3 NA NA t3659.T000905 4 Flowering time S94 x S06 RILs NA 5 6670463 0 5 7103094 0 10.1038/s41438-019-0226-3 NA NA t3659.T000906 4 Flowering time S94 x S06 RILs NA 5 33369519 0 5 33750000 0 10.1038/s41438-019-0226-3 NA NA t3659.T000907 4 Flowering time S94 x S06 RILs NA 6 4310799 0 6 2468105 0 10.1038/s41438-019-0226-3 NA NA t3659.T000908 4 Flowering time 9110Gt x 9930 RILs NA 6 22437332 0 6 27799589 0 10.1038/s41438-019-0226-3 NA NA t3659.T000909 4 Flowering time S94 x S06 RILs NA 6 27051982 0 6 27517628 0 10.1038/s41438-019-0226-3 NA NA t3659.T000910 4 Flowering time 9110Gt x 9930 RILs NA 1 27367230 0 1 28141503 0 10.1038/s41438-019-0226-3 NA NA t3659.T000911 4 Flowering time CC3 x SWCC8 RILs NA 1 26340943 0 1 28305239 0 10.1038/s41438-019-0226-3 NA NA t3659.T000912 4 Flowering time WI7167 x WI7200 F2:3 NA 1 16279114 0 1 32455127 0 10.1038/s41438-019-0226-3 NA NA t3659.T000913 4 Flowering time WI7167 x WI7200 F2:3 NA 1 28363147 0 1 32633069 0 10.1038/s41438-019-0226-3 NA NA t3659.T000914 4 Flowering time WI7167 x WI7200 F2:3 NA 5 28288488 0 5 31530607 0 10.1038/s41438-019-0226-3 NA NA t3659.T000915 4 Flowering time WI7167 x WI7200 F2:3 NA 6 5471152 0 6 7817927 0 10.1038/s41438-019-0226-3 NA NA t3659.T000916 4 Flowering time CC3 x SWCC8 RILs NA 6 10371235 0 6 11185947 0 10.1038/s41438-019-0226-3 NA NA t3659.T000917 4 Sex expression 9110Gt x 9930 RILs NA 1 28305239 0 1 28341342 0 10.1038/s41438-019-0226-3 NA NA t3659.T000918 4 Sex expression 9110Gt x 9930 RILs NA 2 3276171 0 2 4207788 0 10.1038/s41438-019-0226-3 NA NA t3659.T000919 4 Sex expression 9110Gt x 9930 RILs NA 3 11247619 0 3 15722557 0 10.1038/s41438-019-0226-3 NA NA t3659.T000920 4 Sex expression 9110Gt x 9930 RILs NA 6 24903405 0 6 25960486 0 10.1038/s41438-019-0226-3 NA NA t3659.T000921 4 Sex expression 9110Gt x 9930 RILs NA 7 554709 0 7 2231602 0 10.1038/s41438-019-0226-3 NA NA t3659.T000922 4 Sex expression Losuas x BMB F2/BC1 NA 1 1851522 0 1 6844729 0 10.1038/s41438-019-0226-3 NA NA t3659.T000923 4 Sex expression Losuas x BMB F2/BC1 NA 2 22235045 0 2 26227677 0 10.1038/s41438-019-0226-3 NA NA t3659.T000924 4 Sex expression DongHuzao x S-2-98 F2/BC6 NA 3 12190000 0 3 13400000 0 10.1038/s41438-019-0226-3 NA NA t3659.T000925 4 Sex expression H19 x G421 RILs NA 3 12315745 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000926 4 Sex expression Losuas x BMB F2/BC1 NA 3 10748119 0 3 19167642 0 10.1038/s41438-019-0226-3 NA NA t3659.T000927 4 Sex expression DongHuzao x S-2-98 F2/BC6 NA 4 2900000 0 4 6100000 0 10.1038/s41438-019-0226-3 NA NA t3659.T000928 4 Sex expression S94 x S06 RILs NA 5 32033873 0 5 25000000 0 10.1038/s41438-019-0226-3 NA NA t3659.T000929 4 Sex expression DongHuzao x S-2-98 F2/BC6 NA 6 9340981 0 6 11112648 0 10.1038/s41438-019-0226-3 NA NA t3659.T000930 4 Sex expression S94 x S06 RILs NA 6 8837282 0 6 10767736 0 10.1038/s41438-019-0226-3 NA NA t3659.T000931 4 Sex expression DongHuzao x S-2-98 F2/BC6 NA 6 24200000 0 6 24800000 0 10.1038/s41438-019-0226-3 NA NA t3659.T000932 4 Sex expression H19 x G421 RILs NA 6 27588957 0 0 0 10.1038/s41438-019-0226-3 NA NA t3659.T000933 4 Sex expression S94 x S06 RILs NA 6 27051982 0 6 27517628 0 10.1038/s41438-019-0226-3 NA NA t3659.T000934 4 Fruit setting EC1 x 8419s-1 F2:3 NA 1 26337208 0 1 29537810 0 10.1038/s41438-019-0226-3 NA NA t3659.T000935 4 Fruit setting 2A x Gy8 F2:3 NA 2 4130666 0 2 7021022 0 10.1038/s41438-019-0226-3 NA NA t3659.T000936 4 Fruit setting EC1 x 8419s-1 F2:3 NA 2 3269283 0 2 6309316 0 10.1038/s41438-019-0226-3 NA NA t3659.T000937 4 Fruit setting EC1 x 8419s-1 F2:3 NA 2 12407701 0 2 14077315 0 10.1038/s41438-019-0226-3 NA NA t3659.T000938 4 Fruit setting EC1 x 8419s-1 F2:3 NA 3 16948360 0 3 21280153 0 10.1038/s41438-019-0226-3 NA NA t3659.T000939 4 Fruit setting EC1 x 8419s-1 F2:3 NA 3 29054276 0 3 33175522 0 10.1038/s41438-019-0226-3 NA NA t3659.T000940 4 Fruit setting 2A x Gy8 F2:3 NA 4 27636080 0 4 30643268 0 10.1038/s41438-019-0226-3 NA NA t3659.T000941 4 Fruit setting EC1 x 8419s-1 F2:3 NA 5 6310230 0 5 19043074 0 10.1038/s41438-019-0226-3 NA NA t3659.T000942 4 Fruit setting 2A x Gy8 F2:3 NA 5 24918882 0 5 32540733 0 10.1038/s41438-019-0226-3 NA NA t3659.T000943 4 Fruit setting 2A x Gy8 F2:3 NA 6 1049635 0 6 4993324 0 10.1038/s41438-019-0226-3 NA NA t3659.T000944 4 Fruit setting 2A x Gy8 F2:3 NA 6 19624148 0 6 22437332 0 10.1038/s41438-019-0226-3 NA NA t3659.T000945 4 Fruit setting 2A x Gy8 F2:3 NA 6 25832791 0 6 29158804 0 10.1038/s41438-019-0226-3 NA NA t3659.T000946 4 Fruit setting 2A x Gy8 F2:3 NA 7 1277240 0 7 11866347 0 10.1038/s41438-019-0226-3 NA NA t3659.T000947 4 Fruit setting EC1 x 8419s-1 F2:3 NA 7 554709 0 7 4636775 0 10.1038/s41438-019-0226-3 NA NA t3659.T000948 4 Epidermal feature PI 183697 x 1101 F2/BC NA 1 4604797 0 1 6310491 0 10.1038/s41438-019-0226-3 NA NA t3659.T000949 4 Epidermal feature PI 183697 x 1101 F2/BC NA 3 9974889 0 3 12985410 0 10.1038/s41438-019-0226-3 NA NA t3659.T000950 4 Epidermal feature PI 183697 x 1101 F2/BC NA 5 25435033 0 5 25749546 0 10.1038/s41438-019-0226-3 NA NA t3659.T000951 4 Epidermal feature PI 183697 x 1101 F2/BC NA 6 25137916 0 6 27620344 0 10.1038/s41438-019-0226-3 NA NA t3659.T000952 4 Epidermal feature PI 183697 x 1101 NA 6 2674565 0 6 5899013 0 10.1038/s41438-019-0226-3 NA NA t3659.T000953 4 Epidermal feature Consensus QTL from 4 populations NA 4 19108605 0 4 21603943 0 10.1038/s41438-019-0226-3 NA NA t3659.T000954 4 Epidermal feature Consensus QTL from 4 populations NA 6 18830316 0 6 24903405 0 10.1038/s41438-019-0226-3 NA NA t3659.T000955 4 Epidermal feature Consensus QTL from 4 populations NA 6 29575270 0 6 30920995 0 10.1038/s41438-019-0226-3 NA NA t3659.T000956 4 Epidermal feature CS-PMR-1 x Santou RILs NA 4 6005066 0 4 19826037 0 10.1038/s41438-019-0226-3 NA NA t3659.T000957 4 Epidermal feature CS-PMR-1 x Santou RILs NA 5 26221218 0 5 33529539 0 10.1038/s41438-019-0226-3 NA NA t3659.T000958 4 Epidermal feature CS-PMR-1 x Santou RILs NA 6 9138996 0 6 10801545 0 10.1038/s41438-019-0226-3 NA NA t3659.T000959 4 Epidermal feature CS-PMR-1 x Santou RILs NA 1 10041041 0 1 18377790 0 10.1038/s41438-019-0226-3 NA NA t3659.T000960 4 Epidermal feature 9110Gt x 9930, RILs RILs NA 5 24601636 0 5 26431293 0 10.1038/s41438-019-0226-3 NA NA t3659.T000961 4 Epidermal feature CS-PMR-1 x Santou RILs NA 5 27688515 0 5 33529539 0 10.1038/s41438-019-0226-3 NA NA t3659.T000962 4 Fruit size and shape Consensus QTL from 6 populations NA 1 9023276 0 1 20536608 0 10.1038/s41438-019-0226-3 NA NA t3659.T000963 4 Fruit size and shape Consensus QTL from 7 populations NA 1 22623132 0 1 30348448 0 10.1038/s41438-019-0226-3 NA NA t3659.T000964 4 Fruit size and shape Consensus QTL from 3 populations NA 1 3899897 0 1 5366279 0 10.1038/s41438-019-0226-3 NA NA t3659.T000965 4 Fruit size and shape Consensus QTL from 6 populations NA 2 2481633 0 2 15569877 0 10.1038/s41438-019-0226-3 NA NA t3659.T000966 4 Fruit size and shape Consensus QTL from 1 populations NA 2 31144770 0 2 32619632 0 10.1038/s41438-019-0226-3 NA NA t3659.T000967 4 Fruit size and shape Consensus QTL from 5 populations NA 3 2439155 0 3 8050295 0 10.1038/s41438-019-0226-3 NA NA t3659.T000968 4 Fruit size and shape Consensus QTL from 7 populations NA 3 28315821 0 3 38377203 0 10.1038/s41438-019-0226-3 NA NA t3659.T000969 4 Fruit size and shape Consensus QTL from 2 populations NA 3 14413637 0 3 23742682 0 10.1038/s41438-019-0226-3 NA NA t3659.T000970 4 Fruit size and shape Consensus QTL from 6 populations NA 4 19917090 0 4 24886907 0 10.1038/s41438-019-0226-3 NA NA t3659.T000971 4 Fruit size and shape Consensus QTL from 4 populations NA 4 5003355 0 4 17900808 0 10.1038/s41438-019-0226-3 NA NA t3659.T000972 4 Fruit size and shape Consensus QTL from 1 populations NA 4 26624946 0 4 28337988 0 10.1038/s41438-019-0226-3 NA NA t3659.T000973 4 Fruit size and shape Consensus QTL from 4 populations NA 5 23964780 0 5 26736192 0 10.1038/s41438-019-0226-3 NA NA t3659.T000974 4 Fruit size and shape Consensus QTL from 3 populations NA 5 28288488 0 5 31530491 0 10.1038/s41438-019-0226-3 NA NA t3659.T000975 4 Fruit size and shape Consensus QTL from 3 populations NA 5 1274901 0 5 4243996 0 10.1038/s41438-019-0226-3 NA NA t3659.T000976 4 Fruit size and shape Consensus QTL from 2 populations NA 6 20471682 0 6 25710956 0 10.1038/s41438-019-0226-3 NA NA t3659.T000977 4 Fruit size and shape Consensus QTL from 5 populations NA 6 27620344 0 6 31814492 0 10.1038/s41438-019-0226-3 NA NA t3659.T000978 4 Fruit size and shape Consensus QTL from 8 populations NA 6 9340981 0 6 17987073 0 10.1038/s41438-019-0226-3 NA NA t3659.T000979 4 Fruit size and shape Consensus QTL from 5 populations NA 7 16055221 0 7 22732146 0 10.1038/s41438-019-0226-3 NA NA t3659.T000980 4 Fruit size and shape Consensus QTL from 2 populations NA 7 2618099 0 7 11823795 0 10.1038/s41438-019-0226-3 NA NA t3659.T000981 4 Fruit size and shape WI7167 × WI7200 F2:3 NA 1 10480630 0 1 16960082 0 10.1038/s41438-019-0226-3 NA NA t3659.T000982 4 Fruit size and shape 9110Gt × 9930 RILs NA 1 28305239 0 1 29537810 0 10.1038/s41438-019-0226-3 NA NA t3659.T000983 4 Fruit size and shape S94 x S06 RILs NA 1 3435063 0 1 3986626 0 10.1038/s41438-019-0226-3 NA NA t3659.T000984 4 Fruit size and shape Gy14 × WI7221 F2:3 NA 1 21699049 0 1 22720339 0 10.1038/s41438-019-0226-3 NA NA t3659.T000985 4 Fruit size and shape S94 x S06 RILs NA 2 1747745 0 2 2870181 0 10.1038/s41438-019-0226-3 NA NA t3659.T000986 4 Fruit size and shape CC3 x SWCC8 RILs NA 2 7604620 0 2 14709952 0 10.1038/s41438-019-0226-3 NA NA t3659.T000987 4 Fruit size and shape S94 x S06 RILs NA 3 316909 0 3 945153 0 10.1038/s41438-019-0226-3 NA NA t3659.T000988 4 Fruit size and shape CC3 x NC76 F2:3 NA 3 13514340 0 3 15901514 0 10.1038/s41438-019-0226-3 NA NA t3659.T000989 4 Fruit size and shape CC3 x NC76 F2:3 NA 3 25262657 0 3 30323040 0 10.1038/s41438-019-0226-3 NA NA t3659.T000990 4 Fruit size and shape WI7167 × WI7200 F2:3 NA 3 32595051 0 3 35884128 0 10.1038/s41438-019-0226-3 NA NA t3659.T000991 4 Fruit size and shape S94 x S06 RILs RILs NA 4 17993400 0 4 19826037 0 10.1038/s41438-019-0226-3 NA NA t3659.T000992 4 Fruit size and shape WI7167 × WI7200 F2:3 NA 4 19688760 0 4 20548484 0 10.1038/s41438-019-0226-3 NA NA t3659.T000993 4 Fruit size and shape Gy14 × WI7221 F2:3 NA 4 35493 0 4 9004636 0 10.1038/s41438-019-0226-3 NA NA t3659.T000994 4 Fruit size and shape CC3 x SWCC8 RILs NA 4 4989615 0 4 9004636 0 10.1038/s41438-019-0226-3 NA NA t3659.T000995 4 Fruit size and shape S94 x S06 RILs NA 6 27517628 0 6 29068273 0 10.1038/s41438-019-0226-3 NA NA t3659.T000996 4 Fruit size and shape CC3 x SWCC8 RILs NA 6 10927954 0 6 13883910 0 10.1038/s41438-019-0226-3 NA NA t3659.T000997 4 Fruit size and shape 9110Gt × 9930 RILs NA 6 10893377 0 6 17987073 0 10.1038/s41438-019-0226-3 NA NA t3659.T000998 4 Fruit size and shape WI7167 × WI7200 RILs NA 6 11677594 0 6 20436346 0 10.1038/s41438-019-0226-3 NA NA t3659.T000999 4 Fruit size and shape Gy14 × WI7221 F2:3 NA 6 10844084 0 6 19486373 0 10.1038/s41438-019-0226-3 NA NA t3659.T001000 4 Fruit size and shape Consensus QTL from 2 populations NA 1 8222187 0 1 20446610 0 10.1038/s41438-019-0226-3 NA NA t3659.T001001 4 Fruit size and shape Consensus QTL from 3 populations NA 1 22623132 0 1 27020486 0 10.1038/s41438-019-0226-3 NA NA t3659.T001002 4 Fruit size and shape Consensus QTL from 2 populations NA 2 107777 0 2 5183435 0 10.1038/s41438-019-0226-3 NA NA t3659.T001003 4 Fruit size and shape Consensus QTL from 2 populations NA 2 9444314 0 2 14077315 0 10.1038/s41438-019-0226-3 NA NA t3659.T001004 4 Fruit size and shape Consensus QTL NA 3 4093 0 3 2809041 0 10.1038/s41438-019-0226-3 NA NA t3659.T001005 4 Fruit size and shape Consensus QTL from 2 populations NA 3 28315821 0 3 35884128 0 10.1038/s41438-019-0226-3 NA NA t3659.T001006 4 Fruit size and shape Consensus QTL from 2 populations NA 4 6005066 0 4 22207041 0 10.1038/s41438-019-0226-3 NA NA t3659.T001007 4 Fruit size and shape Consensus QTL NA 5 26601959 0 5 29210882 0 10.1038/s41438-019-0226-3 NA NA t3659.T001008 4 Fruit size and shape Consensus QTL NA 6 4276910 0 6 7817927 0 10.1038/s41438-019-0226-3 NA NA t3659.T001009 4 Fruit size and shape Consensus QTL from 2 populations NA 6 27620344 0 6 28406760 0 10.1038/s41438-019-0226-3 NA NA t3659.T001010 4 Fruit size and shape Consensus QTL NA 7 14329677 0 7 17191119 0 10.1038/s41438-019-0226-3 NA NA t3659.T001011 4 Fruit size and shape S94 x S06 RILs NA 1 3435063 0 1 3986626 0 10.1038/s41438-019-0226-3 NA NA t3659.T001012 4 Fruit size and shape S94 x S06 RILs NA 6 16607265 0 6 20239737 0 10.1038/s41438-019-0226-3 NA NA t3659.T001013 4 Fruit size and shape US2018/05490A1 NA 1 18697006 0 1 22186439 0 10.1038/s41438-019-0226-3 NA NA t3659.T001014 4 Fruit size and shape S94 x S06 RILs NA 2 1747745 0 2 2870181 0 10.1038/s41438-019-0226-3 NA NA t3659.T001015 4 Fruit size and shape US2018/05490A1 NA 2 346366 0 2 4198858 0 10.1038/s41438-019-0226-3 NA NA t3659.T001016 4 Fruit size and shape S94 x S06 RILs NA 2 6025678 0 2 8846704 0 10.1038/s41438-019-0226-3 NA NA t3659.T001017 4 Fruit size and shape S94 x S06 RILs NA 4 17993400 0 4 19826037 0 10.1038/s41438-019-0226-3 NA NA t3659.T001018 4 Fruit size and shape S94 x S06 RILs NA 5 7949689 0 5 14298357 0 10.1038/s41438-019-0226-3 NA NA t3659.T001019 4 Fruit size and shape S94 x S06 RILs NA 5 16961924 0 5 26736192 0 10.1038/s41438-019-0226-3 NA NA t3659.T001020 4 Flesh S94 x S06 RILs NA 1 3435063 0 1 3986626 0 10.1038/s41438-019-0226-3 NA NA t3659.T001021 4 Flesh S94 x S06 RILs NA 1 16607265 0 1 20239737 0 10.1038/s41438-019-0226-3 NA NA t3659.T001022 4 Flesh D8 x XUE1 F2:3 NA 2 4440783 0 2 4654446 0 10.1038/s41438-019-0226-3 NA NA t3659.T001023 4 Flesh S94 x S06 RILs NA 2 11896346 0 2 14709952 0 10.1038/s41438-019-0226-3 NA NA t3659.T001024 4 Flesh S94 x S06 RILs NA 3 4419164 0 3 5339800 0 10.1038/s41438-019-0226-3 NA NA t3659.T001025 4 Flesh S94 x S06 RILs NA 6 7726325 0 6 14870341 0 10.1038/s41438-019-0226-3 NA NA t3659.T001026 4 Flesh S94 x S06 RILs NA 6 27051982 0 6 27270372 0 10.1038/s41438-019-0226-3 NA NA t3659.T001027 4 Fruit size and shape S94 x S06 RILs NA 3 316909 0 3 572982 0 10.1038/s41438-019-0226-3 NA NA t3659.T001028 4 Fruit size and shape PI 183967 x 931 RILs NA 3 1122921 0 3 1928872 0 10.1038/s41438-019-0226-3 NA NA t3659.T001029 4 Fruit size and shape PI 183967 x 931 RILs NA 3 13906742 0 3 18907727 0 10.1038/s41438-019-0226-3 NA NA t3659.T001030 4 Fruit size and shape S94 x S06 RILs NA 4 18571199 0 4 19826037 0 10.1038/s41438-019-0226-3 NA NA t3659.T001031 4 Fruit size and shape S94 x S06 RILs NA 5 399606 0 5 3013484 0 10.1038/s41438-019-0226-3 NA NA t3659.T001032 4 Fruit size and shape S94 x S06 RILs NA 6 13983867 0 6 14800000 0 10.1038/s41438-019-0226-3 NA NA t3659.T001033 4 Fruit size and shape 9110Gt x 9930 RILs NA 6 11862392 0 6 12289965 0 10.1038/s41438-019-0226-3 NA NA t3659.T001034 4 Fruit size and shape PI 183967 x 931 RILs NA 6 18991117 0 6 23008175 0 10.1038/s41438-019-0226-3 NA NA t3659.T001035 4 Fruit size and shape S94 x S06 RILs NA 6 27051982 0 6 29068273 0 10.1038/s41438-019-0226-3 NA NA t3659.T001036 4 Fruit size and shape PI 183967 x 931 RILs NA 7 3626972 0 7 4944315 0 10.1038/s41438-019-0226-3 NA NA t3659.T001037 4 Fruit size and shape 1101 x 1694 F2 NA 1 2706771 0 1 4544991 0 10.1038/s41438-019-0226-3 NA NA t3659.T001038 4 Fruit size and shape S94 x S06 RILs NA 1 2163238 0 1 3986626 0 10.1038/s41438-019-0226-3 NA NA t3659.T001039 4 Fruit size and shape 1101 x 1694 F2 NA 1 7905005 0 1 16216287 0 10.1038/s41438-019-0226-3 NA NA t3659.T001040 4 Fruit size and shape S94 x S06 RILs NA 3 14258579 0 3 16797391 0 10.1038/s41438-019-0226-3 NA NA t3659.T001041 4 Fruit size and shape S94 x S06 RILs NA 3 29502335 0 3 32624601 0 10.1038/s41438-019-0226-3 NA NA t3659.T001042 4 Fruit size and shape S94 x S06 RILs NA 5 25378536 0 5 32033873 0 10.1038/s41438-019-0226-3 NA NA t3659.T001043 4 Fruit size and shape S94 x S06 RILs NA 6 13983867 0 6 14653826 0 10.1038/s41438-019-0226-3 NA NA t3659.T001044 4 Fruit size and shape 1101 x 1694 F2 NA 6 25960456 0 6 27143384 0 10.1038/s41438-019-0226-3 NA NA t3659.T001045 4 Fruit size and shape S94 x S06 RILs NA 6 27270372 0 6 27517628 0 10.1038/s41438-019-0226-3 NA NA t3659.T001046 4 Seed PI 183967 x 931 RILs NA 2 30222371 0 2 32798977 0 10.1038/s41438-019-0226-3 NA NA t3659.T001047 4 Seed PI 183967 x 931 RILs NA 3 35165748 0 3 38000000 0 10.1038/s41438-019-0226-3 NA NA t3659.T001048 4 Seed 2A x Gy8 F2:3 NA 3 33290019 0 3 40652814 0 10.1038/s41438-019-0226-3 NA NA t3659.T001049 4 Seed PI 183967 x 931 RILs NA 4 9092431 0 4 17900808 0 10.1038/s41438-019-0226-3 NA NA t3659.T001050 4 Seed 2A x Gy8 F2:3 NA 4 2530050 0 4 11841341 0 10.1038/s41438-019-0226-3 NA NA t3659.T001051 4 Seed PI 183967 x 931 RILs NA 5 4068484 0 5 24325543 0 10.1038/s41438-019-0226-3 NA NA t3659.T001052 4 Seed PI 183967 x 931 RILs NA 5 9966733 0 5 12185473 0 10.1038/s41438-019-0226-3 NA NA t3659.T001053 4 Seed PI 183967 x 931 RILs NA 5 3608355 0 5 26736192 0 10.1038/s41438-019-0226-3 NA NA t3659.T001054 4 Seed 2A x Gy8 F2:3 NA 5 11526950 0 5 24325543 0 10.1038/s41438-019-0226-3 NA NA t3659.T001055 4 Seed PI 183967 x 931 RILs NA 6 16419103 0 6 18934337 0 10.1038/s41438-019-0226-3 NA NA t3659.T001056 4 Seed PI 183967 x 931 RILs NA 6 13373768 0 6 16419103 0 10.1038/s41438-019-0226-3 NA NA t3659.T001057 4 Seed 2A x Gy8 F2:3 NA 6 23629402 0 6 32122847 0 10.1038/s41438-019-0226-3 NA NA t3659.T001058 4 Seed 2A x Gy8 F2:3 NA 7 4636775 0 7 11866347 0 10.1038/s41438-019-0226-3 NA NA t3659.T001059 4 Regeneration ability 9110Gt x 9930 RILs NA 1 5658180 0 1 6299507 0 10.1038/s41438-019-0226-3 NA NA t3659.T001060 4 Regeneration ability 9110Gt x 9930 RILs NA 3 30104525 0 3 30484658 0 10.1038/s41438-019-0226-3 NA NA t3659.T001061 4 Regeneration ability 9110Gt x 9930 RILs NA 6 4264786 0 6 5612251 0 10.1038/s41438-019-0226-3 NA NA t3659.T001062 CsCvy-1 5 Cucumber vein yellowing virus resistnace BSA-seq CE0754 × CE0749 CVYV_121 NA 0 0 CVYV_122 0 0 31.4 10.3389/fpls.2019.01583 NA NA t3659.T001063 1 Fusarium wilt resistance Fine mapping Superina × Rijiecheng F2 InDel1248093 NA 2 1248093 0 InDel181730 2 1817308 0 10.3389/fpls.2019.01425 NA NA t3659.T001064 4 Cuticle thickness Interval mapping CL9930 × Gy14 F7:8 SNP.120657 NA 0 0 0 0 39.8 6.1 10.3389/fpls.2019.01536 NA NA t3659.T001065 4 Epidermal cell height Interval mapping CL9930 × Gy14 F7:8 SNP.9649 NA 0 0 0 0 44.1 17.4 10.3389/fpls.2019.01536 NA NA t3659.T001066 4 Epidermal cell height Interval mapping CL9930 × Gy14 F7:8 SNP.31473 NA 0 0 0 0 87.8 6.7 10.3389/fpls.2019.01536 NA NA t3659.T001067 4 Epidermal cell height Interval mapping CL9930 × Gy14 F7:8 SNP.128649 NA 0 0 0 0 73 4.1 10.3389/fpls.2019.01536 NA NA t3659.T001068 4 Intercalation depth Interval mapping CL9930 × Gy14 F7:8 SNP.9649 NA 0 0 0 0 43.6 28.7 10.3389/fpls.2019.01536 NA NA t3659.T001069 4 Intercalation depth Interval mapping CL9930 × Gy14 F7:8 SNP.55081 NA 0 0 0 0 69.8 4.6 10.3389/fpls.2019.01536 NA NA t3659.T001070 4 Intercalation depth Interval mapping CL9930 × Gy14 F7:8 SNP.85409 NA 0 0 0 0 51.8 6.8 10.3389/fpls.2019.01536 NA NA t3659.T001071 4 Diameters of lipid droplets Interval mapping CL9930 × Gy14 F7:8 SNP.9941 NA 0 0 0 0 37.4 18 10.3389/fpls.2019.01536 NA NA t3659.T001072 4 Diameters of lipid droplets Interval mapping CL9930 × Gy14 F7:8 SNP.143745 NA 0 0 0 0 54.2 3.9 10.3389/fpls.2019.01536 NA NA t3659.T001073 4 Diameters of lipid droplets Interval mapping CL9930 × Gy14 F7:8 SNP.175561 NA 0 0 0 0 52.2 5 10.3389/fpls.2019.01536 NA NA t3659.T001074 4 Epidermal cell width Interval mapping CL9930 × Gy14 F7:8 SNP.52733 NA 0 0 0 0 64.6 5.8 10.3389/fpls.2019.01536 NA NA t3659.T001075 4 Epidermal cell width Interval mapping CL9930 × Gy14 F7:8 SNP.76545 NA 0 0 0 0 15.7 5.5 10.3389/fpls.2019.01536 NA NA t3659.T001076 4 Number of lipid droplets Interval mapping CL9930 × Gy14 F7:8 SNP.52733 NA 0 0 0 0 64.6 4.6 10.3389/fpls.2019.01536 NA NA t3659.T001077 4 Number of lipid droplets Interval mapping CL9930 × Gy14 F7:8 SNP.151005 NA 0 0 0 0 32.8 3.8 10.3389/fpls.2019.01536 NA NA t3659.T001078 1 Root-knot nematode resistance QTL mapping IL10-1 × CC3 F2:6 C01B2 NA 0 0 0 0 0.41 4.36 10.1007/s10265-019-01147-1 NA NA t3659.T001079 1 Root-knot nematode resistance QTL mapping IL10-1 × CC3 F2:6 C05B45 NA 0 0 0 0 84.24 4.35 10.1007/s10265-019-01147-1 NA NA t3659.T001080 1 Root-knot nematode resistance QTL mapping IL10-1 × CC3 F2:6 C05B46 NA 0 0 0 0 84.65 4.44 10.1007/s10265-019-01147-1 NA NA t3659.T001081 4 Flesh color GWAS 9110Gt × PI183967 234 F2 SSR18729 NA 0 0 0 0 5.7 27.2 10.1186/s12870-019-1835-6 NA NA t3659.T001082 4 Flesh extract color GWAS 9110Gt × PI183967 234 F2 SSR13340 NA 0 0 0 0 0 10.1 10.1186/s12870-019-1835-6 NA NA t3659.T001083 4 Flesh chlorophyll content GWAS 9110Gt × PI183967 234 F2 SSR07284 NA 0 0 0 0 0.9 14.6 10.1186/s12870-019-1835-6 NA NA t3659.T001084 4 Flesh color GWAS 9110Gt × PI183967 125 F2 SSR16032 NA 0 0 0 0 23.7 19.3 10.1186/s12870-019-1835-6 NA NA t3659.T001085 4 Flesh extract color GWAS 9110Gt × PI183967 125 F2 SSR16691 NA 0 0 0 0 22.5 29.5 10.1186/s12870-019-1835-6 NA NA t3659.T001086 4 Flesh chlorophyll content GWAS 9110Gt × PI183967 125 F2 c5.loc22 NA 0 0 0 0 22 21 10.1186/s12870-019-1835-6 NA NA t3659.T001087 4 Subgynoecy QTL-seq LOSUAS × BMB F2 SSR05793 NA 1 3 0 1 9 0 3.12 7.5 10.1007/s00122-019-03295-3 NA NA t3659.T001088 4 Subgynoecy QTL-seq LOSUAS × BMB F2 SSR16841 NA 1 21 0 1 26 0 21.85 5.2 10.1007/s00122-019-03295-3 NA NA t3659.T001089 4 Subgynoecy QTL-seq LOSUAS × BMB F2 InDel133 NA 1 10 0 1 16 0 13.3 12 10.1007/s00122-019-03295-3 NA NA t3659.T001090 4 Subgynoecy QTL-seq LOSUAS × BMB BC1 NA 1 4 0 1 5 0 10.1007/s00122-019-03295-3 NA NA t3659.T001091 4 Subgynoecy QTL-seq LOSUAS × BMB BC1 NA 1 19 0 1 23 0 10.1007/s00122-019-03295-3 NA NA t3659.T001092 4 Subgynoecy QTL-seq LOSUAS × BMB BC1 NA 1 10 0 1 13 0 10.1007/s00122-019-03295-3 NA NA t3659.T001093 1 Downy mildew resistance Interval mapping PI 197088 × Changchunmici F2:3 UW084399 NA 0 0 UW083946 0 0 67.01 - 90 3.02 - 6.15 10.1094/PDIS-04-17-0491-RE NA NA t3659.T001094 1 Downy mildew resistance Interval mapping PI 197088 × Changchunmici F2:3 SSR04570 NA 0 0 SSR15029 0 0 84 - 84.7 3.03 - 4.14 10.1094/PDIS-04-17-0491-RE NA NA t3659.T001095 1 Downy mildew resistance Interval mapping PI 197088 × Changchunmici F2:3 UW084520 NA 0 0 UW042029 0 0 30.21 - 44 4.00 - 14.41 10.1094/PDIS-04-17-0491-RE NA NA t3659.T001096 1 Downy mildew resistance Interval mapping PI 197088 × Changchunmici F2:3 UW084534 NA 0 0 UW085065 0 0 19.31 3.32 10.1094/PDIS-04-17-0491-RE NA NA t3659.T001097 1 Downy mildew resistance Interval mapping PI 197088 × Changchunmici F2:3 UW084347 NA 0 0 UW063445 0 0 82.81 - 97.6 3.73 - 4.20 10.1094/PDIS-04-17-0491-RE NA NA t3659.T001098 4 Cotyledon regeneration Interval mapping 9110Gt × 9930 F9 C1B18-19 NA 1 913968 0 0 0 76.8 4.19, 5.46, 4.69 10.1007/s00122-018-3182-7 NA NA t3659.T001099 4 Cotyledon regeneration Interval mapping 9110Gt × 9930 F9 C6B573-574 NA 6 382575 0 0 0 40 10.1007/s00122-018-3182-7 NA NA t3659.T001100 4 Cotyledon regeneration Interval mapping 9110Gt × 9930 F9 C1B18-19 NA 1 913968 0 0 0 76.8 5.3, 6.33 10.1007/s00122-018-3182-7 NA NA t3659.T001101 4 Cotyledon regeneration Interval mapping 9110Gt × 9930 F9 C3B304-305 NA 3 154619 0 0 0 161.8 5.27, 5.21, 6.02 10.1007/s00122-018-3182-7 NA NA t3659.T001102 4 Cotyledon regeneration Interval mapping 9110Gt × 9930 F9 C6B564-565 NA 6 206079 0 0 0 25.7 6.56, 5.93 10.1007/s00122-018-3182-7 NA NA t3659.T001103 4 Cotyledon regeneration Interval mapping 9110Gt × 9930 F9 C6B573-574 NA 6 382575 0 0 0 39.2 6.74 10.1007/s00122-018-3182-7 NA NA t3659.T001104 4 Cotyledon regeneration GWAS 9110Gt × 9930 F9 NA Chr1 25415390 0 0 0 5.7 10.1007/s00122-018-3182-7 NA NA t3659.T001105 4 Cotyledon regeneration GWAS 9110Gt × 9930 F9 NA Chr1 25415810 0 0 0 5.2 10.1007/s00122-018-3182-7 NA NA t3659.T001106 4 Cotyledon regeneration GWAS 9110Gt × 9930 F9 NA Chr1 25420414 0 0 0 5 10.1007/s00122-018-3182-7 NA NA t3659.T001107 Csa1G642540 4 Cotyledon regeneration GWAS 9110Gt × 9930 F9 NA Chr1 25611601 0 0 0 5.1 10.1007/s00122-018-3182-7 NA NA t3659.T001108 4 Cotyledon regeneration GWAS 9110Gt × 9930 F9 NA Chr1 25612092 0 0 0 5.9 10.1007/s00122-018-3182-7 NA NA t3659.T001109 4 Cotyledon regeneration GWAS 9110Gt × 9930 F9 NA Chr1 25612464 0 0 0 5.7 10.1007/s00122-018-3182-7 NA NA t3659.T001110 4 Cotyledon regeneration GWAS 9110Gt × 9930 F9 NA Chr1 25612596 0 0 0 5 10.1007/s00122-018-3182-7 NA NA t3659.T001111 4 Cotyledon regeneration GWAS 9110Gt × 9930 F9 NA Chr1 25613131 0 0 0 5.9 10.1007/s00122-018-3182-7 NA NA t3659.T001112 4 Cotyledon regeneration GWAS 9110Gt × 9930 F9 NA Chr1 25613528 0 0 0 5.1 10.1007/s00122-018-3182-7 NA NA t3659.T001113 Csa1G642550 4 Cotyledon regeneration GWAS 9110Gt × 9930 F9 NA Chr1 25614173 0 0 0 5.1 10.1007/s00122-018-3182-7 NA NA t3659.T001114 Csa1G642550 4 Cotyledon regeneration GWAS 9110Gt × 9930 F9 NA Chr1 25614740 0 0 0 5.3 10.1007/s00122-018-3182-7 NA NA t3659.T001115 Csa1G642550 4 Cotyledon regeneration GWAS 9110Gt × 9930 F9 NA Chr1 25614880 0 0 0 5.3 10.1007/s00122-018-3182-7 NA NA t3659.T001116 Csa1G642550 4 Cotyledon regeneration GWAS 9110Gt × 9930 F9 NA Chr1 25615044 0 0 0 5.4 10.1007/s00122-018-3182-7 NA NA t3659.T001117 Csa1G642550 4 Cotyledon regeneration GWAS 9110Gt × 9930 F9 NA Chr1 25615431 0 0 0 5.3 10.1007/s00122-018-3182-7 NA NA t3659.T001118 Csa1G642550 4 Cotyledon regeneration GWAS 9110Gt × 9930 F9 NA Chr1 25615527 0 0 0 5.1 10.1007/s00122-018-3182-7 NA NA t3659.T001119 Csa1G642550 4 Cotyledon regeneration GWAS 9110Gt × 9930 F9 NA Chr1 25615565 0 0 0 5.3 10.1007/s00122-018-3182-7 NA NA t3659.T001120 Csa1G643050 4 Cotyledon regeneration GWAS 9110Gt × 9930 F9 NA Chr1 25632321 0 0 0 5 10.1007/s00122-018-3182-7 NA NA t3659.T001121 4 Cotyledon regeneration GWAS 9110Gt × 9930 F9 NA Chr1 25642059 0 0 0 5.6 10.1007/s00122-018-3182-7 NA NA t3659.T001122 4 Fruit spine density Interval mapping PI183967 × XTMC LM SSR15737 NA 0 0 0 0 28.5 5.19 10.1007/s00122-018-3191-6 NA NA t3659.T001123 4 Fruit spine density Interval mapping PI183967 × XTMC LM c4.loc28 NA 0 0 0 0 28 6 10.1007/s00122-018-3191-6 NA NA t3659.T001124 4 Fruit spine density Interval mapping PI183967 × XTMC LM c4.loc28 NA 0 0 0 0 28 6 10.1007/s00122-018-3191-6 NA NA t3659.T001125 4 Fruit spine density Interval mapping PI183967 × XTMC LM SSR11244 NA 0 0 0 0 77.3 19.46 10.1007/s00122-018-3191-6 NA NA t3659.T001126 4 Fruit spine density Interval mapping PI183967 × XTMC LM SSR11244 NA 0 0 0 0 77.3 24.9 10.1007/s00122-018-3191-6 NA NA t3659.T001127 4 Fruit spine density Interval mapping PI183967 × XTMC LM SSR11244 NA 0 0 0 0 77.3 18.37 10.1007/s00122-018-3191-6 NA NA t3659.T001128 4 Fruit spine density Interval mapping PI183967 × XTMC LM SSR11244 NA 0 0 0 0 77.3 24.56 10.1007/s00122-018-3191-6 NA NA t3659.T001129 4 Fruit spine density Interval mapping YD × XTMC YR c6.loc134 NA 0 0 0 0 134 45.86 10.1007/s00122-018-3191-6 NA NA t3659.T001130 4 Fruit spine density Interval mapping YD × XTMC YR c6.loc134 NA 0 0 0 0 134 39.38 10.1007/s00122-018-3191-6 NA NA t3659.T001131 4 Fruit spine density Interval mapping YD × XTMC YR c6.loc134 NA 0 0 0 0 134 29.13 10.1007/s00122-018-3191-6 NA NA t3659.T001132 4 Fruit spine density Interval mapping YD × XTMC HR SSRWMV97 NA 0 0 0 0 65.9 7.1 10.1007/s00122-018-3191-6 NA NA t3659.T001133 4 Fruit spine density Interval mapping 65G × 02245 HR SSR10449 NA 0 0 0 0 75.8 7.83 10.1007/s00122-018-3191-6 NA NA t3659.T001134 4 Fruit spine density Interval mapping 65G × 02245 HR c6.loc70 NA 0 0 0 0 70 7.54 10.1007/s00122-018-3191-6 NA NA t3659.T001135 4 Fruit spine density Interval mapping 65G × 02245 HR c6.loc74 NA 0 0 0 0 74 6.93 10.1007/s00122-018-3191-6 NA NA t3659.T001136 4 Fruit spine density Interval mapping 65G × 02245 HR c6.loc100 NA 0 0 0 0 100 21.19 10.1007/s00122-018-3191-6 NA NA t3659.T001137 4 Fruit spine density Interval mapping 65G × 02245 HR c6.loc100 NA 0 0 0 0 100 37.01 10.1007/s00122-018-3191-6 NA NA t3659.T001138 4 Fruit spine density Interval mapping 65G × 02245 HR c6.loc98 NA 0 0 0 0 98 18.96 10.1007/s00122-018-3191-6 NA NA t3659.T001139 4 Fruit spine density Interval mapping 65G × 02245 HR c6.loc100 NA 0 0 0 0 100 26.63 10.1007/s00122-018-3191-6 NA NA t3659.T001140 4 Fruit spine density Interval mapping 65G × 02245 HP c6.loc74 NA 0 0 0 0 74 4.99 10.1007/s00122-018-3191-6 NA NA t3659.T001141 4 Fruit spine density Interval mapping 65G × 02245 HP SSR16005 NA 0 0 0 0 82.1 5.22 10.1007/s00122-018-3191-6 NA NA t3659.T001142 4 Fruit spine density Interval mapping 65G × 02245 HP SSR10449 NA 0 0 0 0 83.1 5.78 10.1007/s00122-018-3191-6 NA NA t3659.T001143 4 Fruit spine density Interval mapping 65G × 02245 HP c6.loc98 NA 0 0 0 0 98 12.09 10.1007/s00122-018-3191-6 NA NA t3659.T001144 4 Fruit spine density Interval mapping 65G × 02245 HP c6.loc100 NA 0 0 0 0 100 19.3 10.1007/s00122-018-3191-6 NA NA t3659.T001145 4 Fruit spine density Interval mapping 65G × 02245 HP c6.loc100 NA 0 0 0 0 100 10.28 10.1007/s00122-018-3191-6 NA NA t3659.T001146 4 Fruit spine density Interval mapping 65G × 02245 HP c6.loc100 NA 0 0 0 0 100 15.6 10.1007/s00122-018-3191-6 NA NA t3659.T001147 1 Angular leaf spot resistance Interval mapping Gy14 × B10 F5:6 IS_16325300 NA Chr 5 3465660 0 UW085415 Chr 5 4360686 0 1.6 - 2.4 23.1/26.3 10.1007/s11032-018-0866-2 NA NA t3659.T001148 1 Angular leaf spot resistance Interval mapping Gy14 × B10 F5:6 16327616-IS NA Chr 5 4576749 0 16326693 Chr 5 6239715 0 4.7 - 10.5 9.6/7.3 10.1007/s11032-018-0866-2 NA NA t3659.T001149 1 Downy mildew resistance Interval mapping changchunmici × IL52 F2 15InDel40 NA 0 0 0 0 9.21 19.15 10.1007/s00122-018-3150-2 NA NA t3659.T001150 1 Downy mildew resistance Interval mapping changchunmici × IL52 F2 InDel73 NA 0 0 0 0 88.41 10.25 10.1007/s00122-018-3150-2 NA NA t3659.T001151 1 Downy mildew resistance Interval mapping changchunmici × IL52 F2 UW083932 NA 0 0 0 0 13.21 4.05 10.1007/s00122-018-3150-2 NA NA t3659.T001152 1 Downy mildew resistance Interval mapping changchunmici × IL52 F2 UW083977 NA 0 0 0 0 46.51 2.9 10.1007/s00122-018-3150-2 NA NA t3659.T001153 1 Downy mildew resistance Interval mapping changchunmici × IL52 F2 SSR16841 NA 0 0 0 0 89.11 3.15 10.1007/s00122-018-3150-2 NA NA t3659.T001154 1 Downy mildew resistance Interval mapping changchunmici × IL52 F2 UW085227 NA 0 0 0 0 12.11 3.63 10.1007/s00122-018-3150-2 NA NA t3659.T001155 1 Downy mildew resistance Interval mapping changchunmici × IL52 F2 InDel73 NA 0 0 0 0 91.41 15.79 10.1007/s00122-018-3150-2 NA NA t3659.T001156 1 Downy mildew resistance Interval mapping changchunmici × IL52 F2 SSR20599 NA 0 0 0 0 106.31 2.74 10.1007/s00122-018-3150-2 NA NA t3659.T001157 1 Downy mildew resistance Interval mapping changchunmici × IL52 F2 UW039604 NA 0 0 0 0 51.71 3.16 10.1007/s00122-018-3150-2 NA NA t3659.T001158 1 Downy mildew resistance Interval mapping changchunmici × IL52 F2 15InDel40 NA 0 0 0 0 11.11 16.21 10.1007/s00122-018-3150-2 NA NA t3659.T001159 1 Downy mildew resistance Interval mapping changchunmici × IL52 F2 InDel73 NA 0 0 0 0 91.41 13.03 10.1007/s00122-018-3150-2 NA NA t3659.T001160 1 Cucumber mosaic virus resistance Interval mapping 65G × 02245 RIL SSR9-56 NA 0 0 SSR11-177 0 0 32.7 11.58 10.1371/journal.pone.0200571 NA NA t3659.T001161 1 Cucumber mosaic virus resistance Interval mapping 65G × 02245 RIL SSR9-56 NA 0 0 SSR11-177 0 0 32.7 10.09 10.1371/journal.pone.0200571 NA NA t3659.T001162 4 Fruit length QTL mapping G421 × H19 F2 E24Mb7-247 NA 0 0 UW085209 0 0 38 3.5 10.1111/tpj.13991 NA NA t3659.T001163 4 Fruit length QTL mapping G421 × H19 F2 E24M17-134 NA 0 0 SSR07559 0 0 18 3.3 10.1111/tpj.13991 NA NA t3659.T001164 4 Fruit length QTL mapping G421 × H19 F2 SSR21758 NA 0 0 UW084267 0 0 30 28.6 10.1111/tpj.13991 NA NA t3659.T001165 4 Fruit diameter QTL mapping G421 × H19 F2 SSR21758 NA 0 0 UW084267 0 0 30 25.9 10.1111/tpj.13991 NA NA t3659.T001166 4 Fruit weight QTL mapping G421 × H19 F2 SSR21758 NA 0 0 SSR03940 0 0 30 20.7 10.1111/tpj.13991 NA NA t3659.T001167 4 Seed weight QTL mapping G421 × H19 F2 SSR21758 NA 0 0 UW084267 0 0 30 32.2 10.1111/tpj.13991 NA NA t3659.T001168 4 Seed weight QTL mapping G421 × H19 F2 CSWCT16 NA 0 0 CSWCTT14b 0 0 70 6 10.1111/tpj.13991 NA NA t3659.T001169 4 Multiple lateral branches QTL mapping G421 × H19 F2 SSR02355 NA 0 0 UW084267 0 0 30 23 10.1111/tpj.13991 NA NA t3659.T001170 4 Multiple lateral branches QTL mapping G421 × H19 F2 SSR01698 NA 0 0 UW020516 0 0 70 5.8 10.1111/tpj.13991 NA NA t3659.T001171 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker1_16905088 NA 0 0 0 0 79 2.02 0.00376 10.1007/s00122-017-3022-1 NA NA t3659.T001172 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker3_9882197 NA 0 0 0 0 37 2.25 0.00124 10.1007/s00122-017-3022-1 NA NA t3659.T001173 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker3_37674467 NA 0 0 0 0 147 3.72 0 10.1007/s00122-017-3022-1 NA NA t3659.T001174 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 SSR17911 NA 0 0 0 0 72 5.18 0.000163 10.1007/s00122-017-3022-1 NA NA t3659.T001175 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_64722 NA 0 0 0 0 40 4.94 0 10.1007/s00122-017-3022-1 NA NA t3659.T001176 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_26224508 NA 0 0 0 0 121 6.46 0 10.1007/s00122-017-3022-1 NA NA t3659.T001177 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_5350727 NA 0 0 0 0 21 1.83 0.0201 10.1007/s00122-017-3022-1 NA NA t3659.T001178 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_26347727 NA 0 0 0 0 97 1.73 0.0458 10.1007/s00122-017-3022-1 NA NA t3659.T001179 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker1_17017708 NA 0 0 0 0 80 1.95 0.0175 10.1007/s00122-017-3022-1 NA NA t3659.T001180 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker3_9882197 NA 0 0 0 0 37 2.23 0.00158 10.1007/s00122-017-3022-1 NA NA t3659.T001181 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker3_32076816 NA 0 0 0 0 126 1.52 0.0113 10.1007/s00122-017-3022-1 NA NA t3659.T001182 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 SSR17911 NA 0 0 0 0 72 6.12 0.000144 10.1007/s00122-017-3022-1 NA NA t3659.T001183 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_17809662 NA 0 0 0 0 73 3.58 0 10.1007/s00122-017-3022-1 NA NA t3659.T001184 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_25834528 NA 0 0 0 0 120 5.45 0 10.1007/s00122-017-3022-1 NA NA t3659.T001185 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_25651290 NA 0 0 0 0 95 2.26 0.00209 10.1007/s00122-017-3022-1 NA NA t3659.T001186 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker2_8704652 NA 0 0 0 0 35 1.67 0.00468 10.1007/s00122-017-3022-1 NA NA t3659.T001187 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker3_9882197 NA 0 0 0 0 37 3.31 0.000812 10.1007/s00122-017-3022-1 NA NA t3659.T001188 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 SSR17911 NA 0 0 0 0 72 4.1 0.00023 10.1007/s00122-017-3022-1 NA NA t3659.T001189 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 SSR07531 NA 0 0 0 0 70 3.69 0 10.1007/s00122-017-3022-1 NA NA t3659.T001190 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_25626783 NA 0 0 0 0 118 4.76 0 10.1007/s00122-017-3022-1 NA NA t3659.T001191 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_5079443 NA 0 0 0 0 19 1.92 0.0296 10.1007/s00122-017-3022-1 NA NA t3659.T001192 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_25651290 NA 0 0 0 0 117 2.78 0.00379 10.1007/s00122-017-3022-1 NA NA t3659.T001193 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker1_16905088 NA 0 0 0 0 79 1.96 0.0505 10.1007/s00122-017-3022-1 NA NA t3659.T001194 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker2_8704652 NA 0 0 0 0 35 1.99 0.0118 10.1007/s00122-017-3022-1 NA NA t3659.T001195 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker2_20890971 NA 0 0 0 0 116 1.89 0.0353 10.1007/s00122-017-3022-1 NA NA t3659.T001196 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_2478378 NA 0 0 0 0 47 1.87 0.000242 10.1007/s00122-017-3022-1 NA NA t3659.T001197 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_16807790 NA 0 0 0 0 66 5.04 0 10.1007/s00122-017-3022-1 NA NA t3659.T001198 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 SSR15196 NA 0 0 0 0 115 4.45 0 10.1007/s00122-017-3022-1 NA NA t3659.T001199 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_5079443 NA 0 0 0 0 19 1.69 0.0488 10.1007/s00122-017-3022-1 NA NA t3659.T001200 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_25651290 NA 0 0 0 0 95 1.84 0.00839 10.1007/s00122-017-3022-1 NA NA t3659.T001201 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker1_17017708 NA 0 0 0 0 80 3.67 0.000568 10.1007/s00122-017-3022-1 NA NA t3659.T001202 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker2_21102994 NA 0 0 0 0 118 2.34 0.00712 10.1007/s00122-017-3022-1 NA NA t3659.T001203 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 SSR13312 NA 0 0 0 0 39 2.25 0.00794 10.1007/s00122-017-3022-1 NA NA t3659.T001204 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 SSR17911 NA 0 0 0 0 72 5.56 0 10.1007/s00122-017-3022-1 NA NA t3659.T001205 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_64722 NA 0 0 0 0 40 5.3 0 10.1007/s00122-017-3022-1 NA NA t3659.T001206 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 SSR07531 NA 0 0 0 0 70 3.49 0 10.1007/s00122-017-3022-1 NA NA t3659.T001207 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 SSR15196 NA 0 0 0 0 115 5.92 0 10.1007/s00122-017-3022-1 NA NA t3659.T001208 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_26347727 NA 0 0 0 0 98 1.71 0.0516 10.1007/s00122-017-3022-1 NA NA t3659.T001209 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker1_17017708 NA 0 0 0 0 80 1.91 0.0247 10.1007/s00122-017-3022-1 NA NA t3659.T001210 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker2_7976333 NA 0 0 0 0 30 1.97 0.051 10.1007/s00122-017-3022-1 NA NA t3659.T001211 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker3_9882197 NA 0 0 0 0 37 2 0.0146 10.1007/s00122-017-3022-1 NA NA t3659.T001212 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 SSR17911 NA 0 0 0 0 72 6.57 0 10.1007/s00122-017-3022-1 NA NA t3659.T001213 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 SSR18729 NA 0 0 0 0 52 3.62 0.000213 10.1007/s00122-017-3022-1 NA NA t3659.T001214 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_16754619 NA 0 0 0 0 67 3.54 0 10.1007/s00122-017-3022-1 NA NA t3659.T001215 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_25834528 NA 0 0 0 0 120 7.55 0 10.1007/s00122-017-3022-1 NA NA t3659.T001216 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_26347727 NA 0 0 0 0 98 1.91 0.0179 10.1007/s00122-017-3022-1 NA NA t3659.T001217 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker2_10787845 NA 0 0 0 0 40 1.9 0.0253 10.1007/s00122-017-3022-1 NA NA t3659.T001218 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker3_37674467 NA 0 0 0 0 147 4.58 0 10.1007/s00122-017-3022-1 NA NA t3659.T001219 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 SSR17911 NA 0 0 0 0 72 3.67 0.00623 10.1007/s00122-017-3022-1 NA NA t3659.T001220 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_25626783 NA 0 0 0 0 118 9.92 0 10.1007/s00122-017-3022-1 NA NA t3659.T001221 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_2345415 NA 0 0 0 0 11 1.67 0.0282 10.1007/s00122-017-3022-1 NA NA t3659.T001222 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_25651290 NA 0 0 0 0 95 1.91 0.0265 10.1007/s00122-017-3022-1 NA NA t3659.T001223 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker1_16905088 NA 0 0 0 0 79 2.12 0.0013 10.1007/s00122-017-3022-1 NA NA t3659.T001224 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker2_9973038 NA 0 0 0 0 38 1.91 0.0178 10.1007/s00122-017-3022-1 NA NA t3659.T001225 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker3_37674467 NA 0 0 0 0 147 3.08 0.000311 10.1007/s00122-017-3022-1 NA NA t3659.T001226 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 SSR17911 NA 0 0 0 0 72 7.13 0 10.1007/s00122-017-3022-1 NA NA t3659.T001227 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_64722 NA 0 0 0 0 40 2.24 0 10.1007/s00122-017-3022-1 NA NA t3659.T001228 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_16754619 NA 0 0 0 0 67 5.97 0 10.1007/s00122-017-3022-1 NA NA t3659.T001229 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_25626783 NA 0 0 0 0 117 7.61 0 10.1007/s00122-017-3022-1 NA NA t3659.T001230 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_5079443 NA 0 0 0 0 19 1.83 0.0254 10.1007/s00122-017-3022-1 NA NA t3659.T001231 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_25651290 NA 0 0 0 0 95 1.81 0.0397 10.1007/s00122-017-3022-1 NA NA t3659.T001232 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker1_16905088 NA 0 0 0 0 79 2.02 0.00586 10.1007/s00122-017-3022-1 NA NA t3659.T001233 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker2_8521946 NA 0 0 0 0 34 3.78 0.000137 10.1007/s00122-017-3022-1 NA NA t3659.T001234 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker3_37674467 NA 0 0 0 0 147 2.18 0.00188 10.1007/s00122-017-3022-1 NA NA t3659.T001235 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 SSR17911 NA 0 0 0 0 72 7.13 0.000133 10.1007/s00122-017-3022-1 NA NA t3659.T001236 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_64722 NA 0 0 0 0 40 6.98 0 10.1007/s00122-017-3022-1 NA NA t3659.T001237 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_16754619 NA 0 0 0 0 67 4.15 0 10.1007/s00122-017-3022-1 NA NA t3659.T001238 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_25566302 NA 0 0 0 0 119 7.25 0 10.1007/s00122-017-3022-1 NA NA t3659.T001239 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_5350727 NA 0 0 0 0 22 2.75 0.0012 10.1007/s00122-017-3022-1 NA NA t3659.T001240 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_26132968 NA 0 0 0 0 97 1.72 0.045 10.1007/s00122-017-3022-1 NA NA t3659.T001241 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker2_8521946 NA 0 0 0 0 34 2.26 0.00297 10.1007/s00122-017-3022-1 NA NA t3659.T001242 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker3_37550829 NA 0 0 0 0 146 4.37 0.000118 10.1007/s00122-017-3022-1 NA NA t3659.T001243 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 SSR17911 NA 0 0 0 0 72 2.07 0.0198 10.1007/s00122-017-3022-1 NA NA t3659.T001244 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_16754619 NA 0 0 0 0 67 3.1 0 10.1007/s00122-017-3022-1 NA NA t3659.T001245 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_25626783 NA 0 0 0 0 117 3.4 0 10.1007/s00122-017-3022-1 NA NA t3659.T001246 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_5350727 NA 0 0 0 0 21 1.94 0.00701 10.1007/s00122-017-3022-1 NA NA t3659.T001247 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker1_17750087 NA 0 0 0 0 83 1.81 0.00383 10.1007/s00122-017-3022-1 NA NA t3659.T001248 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker2_9973038 NA 0 0 0 0 38 1.96 0.0214 10.1007/s00122-017-3022-1 NA NA t3659.T001249 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker3_37674467 NA 0 0 0 0 147 4.48 0 10.1007/s00122-017-3022-1 NA NA t3659.T001250 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 SSR17911 NA 0 0 0 0 72 5.7 0.00146 10.1007/s00122-017-3022-1 NA NA t3659.T001251 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_12332139 NA 0 0 0 0 39 2.72 0 10.1007/s00122-017-3022-1 NA NA t3659.T001252 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_16754619 NA 0 0 0 0 67 4.08 0 10.1007/s00122-017-3022-1 NA NA t3659.T001253 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_25834528 NA 0 0 0 0 120 4.96 0 10.1007/s00122-017-3022-1 NA NA t3659.T001254 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_5079443 NA 0 0 0 0 20 3.56 0.000283 10.1007/s00122-017-3022-1 NA NA t3659.T001255 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker1_16905088 NA 0 0 0 0 79 2.29 0.000726 10.1007/s00122-017-3022-1 NA NA t3659.T001256 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker2_8704652 NA 0 0 0 0 35 2 0.00852 10.1007/s00122-017-3022-1 NA NA t3659.T001257 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker3_37674467 NA 0 0 0 0 147 2 0.00767 10.1007/s00122-017-3022-1 NA NA t3659.T001258 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 SSR17911 NA 0 0 0 0 72 16.03 0 10.1007/s00122-017-3022-1 NA NA t3659.T001259 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_12332139 NA 0 0 0 0 39 4.87 0 10.1007/s00122-017-3022-1 NA NA t3659.T001260 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_17746314 NA 0 0 0 0 72 4.05 0 10.1007/s00122-017-3022-1 NA NA t3659.T001261 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 SSR15196 NA 0 0 0 0 115 11.15 0 10.1007/s00122-017-3022-1 NA NA t3659.T001262 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_4143734 NA 0 0 0 0 17 1.67 0.046 10.1007/s00122-017-3022-1 NA NA t3659.T001263 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_26347727 NA 0 0 0 0 98 1.81 0.0583 10.1007/s00122-017-3022-1 NA NA t3659.T001264 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker1_16759330 NA 0 0 0 0 77 1.99 0.0367 10.1007/s00122-017-3022-1 NA NA t3659.T001265 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker2_9579249 NA 0 0 0 0 36 1.96 0.0447 10.1007/s00122-017-3022-1 NA NA t3659.T001266 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker3_37674467 NA 0 0 0 0 147 4.89 0 10.1007/s00122-017-3022-1 NA NA t3659.T001267 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 SSR17911 NA 0 0 0 0 72 2.89 0.0132 10.1007/s00122-017-3022-1 NA NA t3659.T001268 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_13500150 NA 0 0 0 0 53 2.63 0 10.1007/s00122-017-3022-1 NA NA t3659.T001269 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_17256253 NA 0 0 0 0 69 2.16 0 10.1007/s00122-017-3022-1 NA NA t3659.T001270 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 SSR15196 NA 0 0 0 0 115 6.82 0 10.1007/s00122-017-3022-1 NA NA t3659.T001271 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_5079443 NA 0 0 0 0 20 1.6 0.02 10.1007/s00122-017-3022-1 NA NA t3659.T001272 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker1_16759330 NA 0 0 0 0 77 1.61 0.0368 10.1007/s00122-017-3022-1 NA NA t3659.T001273 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker2_8704652 NA 0 0 0 0 35 1.89 0.0102 10.1007/s00122-017-3022-1 NA NA t3659.T001274 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker2_20890971 NA 0 0 0 0 116 2.33 0.037 10.1007/s00122-017-3022-1 NA NA t3659.T001275 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker3_37674467 NA 0 0 0 0 147 4.46 0 10.1007/s00122-017-3022-1 NA NA t3659.T001276 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker4_16040398 NA 0 0 0 0 77 5.93 0.000738 10.1007/s00122-017-3022-1 NA NA t3659.T001277 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_16754619 NA 0 0 0 0 67 5.24 0 10.1007/s00122-017-3022-1 NA NA t3659.T001278 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_25566302 NA 0 0 0 0 119 7 0 10.1007/s00122-017-3022-1 NA NA t3659.T001279 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_4143734 NA 0 0 0 0 17 1.93 0.0163 10.1007/s00122-017-3022-1 NA NA t3659.T001280 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker2_8704652 NA 0 0 0 0 35 1.9 0.00627 10.1007/s00122-017-3022-1 NA NA t3659.T001281 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker2_20890971 NA 0 0 0 0 116 2 0.057 10.1007/s00122-017-3022-1 NA NA t3659.T001282 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker3_37674467 NA 0 0 0 0 147 3.38 0.000224 10.1007/s00122-017-3022-1 NA NA t3659.T001283 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker4_16040398 NA 0 0 0 0 77 4.52 0.00439 10.1007/s00122-017-3022-1 NA NA t3659.T001284 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_16754619 NA 0 0 0 0 67 5.45 0 10.1007/s00122-017-3022-1 NA NA t3659.T001285 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_25626783 NA 0 0 0 0 118 6.55 0 10.1007/s00122-017-3022-1 NA NA t3659.T001286 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_4143734 NA 0 0 0 0 17 2.02 0.00329 10.1007/s00122-017-3022-1 NA NA t3659.T001287 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_25651290 NA 0 0 0 0 95 1.71 0.0101 10.1007/s00122-017-3022-1 NA NA t3659.T001288 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker1_16905088 NA 0 0 0 0 79 1.72 0.021 10.1007/s00122-017-3022-1 NA NA t3659.T001289 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker2_8704652 NA 0 0 0 0 35 1.98 0.0105 10.1007/s00122-017-3022-1 NA NA t3659.T001290 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker3_37674467 NA 0 0 0 0 147 5.81 0 10.1007/s00122-017-3022-1 NA NA t3659.T001291 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 SSR17911 NA 0 0 0 0 72 5.95 0.00113 10.1007/s00122-017-3022-1 NA NA t3659.T001292 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_64722 NA 0 0 0 0 40 3.92 0 10.1007/s00122-017-3022-1 NA NA t3659.T001293 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_17746314 NA 0 0 0 0 72 5.45 0 10.1007/s00122-017-3022-1 NA NA t3659.T001294 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_25165846 NA 0 0 0 0 116 11.06 0 10.1007/s00122-017-3022-1 NA NA t3659.T001295 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_5350727 NA 0 0 0 0 22 1.87 0.00287 10.1007/s00122-017-3022-1 NA NA t3659.T001296 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker1_16905088 NA 0 0 0 0 79 2.36 0.00218 10.1007/s00122-017-3022-1 NA NA t3659.T001297 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker2_8521946 NA 0 0 0 0 34 1.94 0.00986 10.1007/s00122-017-3022-1 NA NA t3659.T001298 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker2_20890971 NA 0 0 0 0 116 1.78 0.0518 10.1007/s00122-017-3022-1 NA NA t3659.T001299 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker3_37674467 NA 0 0 0 0 147 4.18 0 10.1007/s00122-017-3022-1 NA NA t3659.T001300 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 SSR17911 NA 0 0 0 0 72 12.68 0 10.1007/s00122-017-3022-1 NA NA t3659.T001301 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_64722 NA 0 0 0 0 40 3.89 0 10.1007/s00122-017-3022-1 NA NA t3659.T001302 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_16754619 NA 0 0 0 0 67 8.65 0 10.1007/s00122-017-3022-1 NA NA t3659.T001303 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_25566302 NA 0 0 0 0 119 11.79 0 10.1007/s00122-017-3022-1 NA NA t3659.T001304 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_4143734 NA 0 0 0 0 17 1.85 0.00645 10.1007/s00122-017-3022-1 NA NA t3659.T001305 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker1_16905088 NA 0 0 0 0 79 1.91 0.00542 10.1007/s00122-017-3022-1 NA NA t3659.T001306 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker2_8521946 NA 0 0 0 0 34 2.65 0.00133 10.1007/s00122-017-3022-1 NA NA t3659.T001307 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker2_20890971 NA 0 0 0 0 116 2 0.0518 10.1007/s00122-017-3022-1 NA NA t3659.T001308 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker3_9882197 NA 0 0 0 0 37 2.12 0.0304 10.1007/s00122-017-3022-1 NA NA t3659.T001309 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker3_37674467 NA 0 0 0 0 147 2.28 0.00339 10.1007/s00122-017-3022-1 NA NA t3659.T001310 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 SSR17911 NA 0 0 0 0 72 13.37 0 10.1007/s00122-017-3022-1 NA NA t3659.T001311 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_64722 NA 0 0 0 0 40 4.72 0 10.1007/s00122-017-3022-1 NA NA t3659.T001312 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_16754619 NA 0 0 0 0 67 6.2 0 10.1007/s00122-017-3022-1 NA NA t3659.T001313 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_25566302 NA 0 0 0 0 119 11.92 0 10.1007/s00122-017-3022-1 NA NA t3659.T001314 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_5079443 NA 0 0 0 0 20 2.12 0.00362 10.1007/s00122-017-3022-1 NA NA t3659.T001315 1 Downy mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_26132968 NA 0 0 0 0 97 1.81 0.0191 10.1007/s00122-017-3022-1 NA NA t3659.T001316 1 Powdery mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker1_25833145 NA 0 0 0 0 101.3 4.61 0 10.1007/s00122-017-3022-1 NA NA t3659.T001317 1 Powdery mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker2_12537499 NA 0 0 0 0 48 8.25 0 10.1007/s00122-017-3022-1 NA NA t3659.T001318 1 Powdery mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_25626518 NA 0 0 0 0 117.7 19.45 0 10.1007/s00122-017-3022-1 NA NA t3659.T001319 1 Powdery mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_26132968 NA 0 0 0 0 117.56 4.96 0.0268 10.1007/s00122-017-3022-1 NA NA t3659.T001320 1 Powdery mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker1_25833145 NA 0 0 0 0 101.3 2.59 0 10.1007/s00122-017-3022-1 NA NA t3659.T001321 1 Powdery mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 SSR15196 NA 0 0 0 0 115.1 21.46 0 10.1007/s00122-017-3022-1 NA NA t3659.T001322 1 Powdery mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker1_27654797 NA 0 0 0 0 104.77 3.04 0.00351 10.1007/s00122-017-3022-1 NA NA t3659.T001323 1 Powdery mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker4_3973470 NA 0 0 0 0 17 2.95 0.00106 10.1007/s00122-017-3022-1 NA NA t3659.T001324 1 Powdery mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker5_25566302 NA 0 0 0 0 119 10.13 0 10.1007/s00122-017-3022-1 NA NA t3659.T001325 1 Powdery mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_26499531 NA 0 0 0 0 120 3.68 0.0035 10.1007/s00122-017-3022-1 NA NA t3659.T001326 1 Powdery mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker1_25833145 NA 0 0 0 0 101.3 3.82 0 10.1007/s00122-017-3022-1 NA NA t3659.T001327 1 Powdery mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker2_12541521 NA 0 0 0 0 49.15 5.12 0.00458 10.1007/s00122-017-3022-1 NA NA t3659.T001328 1 Powdery mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 SSR15196 NA 0 0 0 0 115 30.47 0 10.1007/s00122-017-3022-1 NA NA t3659.T001329 1 Powdery mildew resistance Interval mapping PI 197088 × Coolgreen F6:7 Marker6_26132968 NA 0 0 0 0 117.56 5.45 0.00892 10.1007/s00122-017-3022-1 NA NA t3659.T001330 4 length Interval mapping CS-PMR1 × ‘Santou’ F8 SSR10134 NA 0 0 CSN220 0 0 39.2 7.3 10.1007/s10681-017-1926-0 NA NA t3659.T001331 4 length Interval mapping CS-PMR1 × ‘Santou’ F8 SSR1091 NA 0 0 SSR262 0 0 82.6 7.93 10.1007/s10681-017-1926-0 NA NA t3659.T001332 4 length Interval mapping CS-PMR1 × ‘Santou’ F8 SSR289 NA 0 0 SSR11596 0 0 40.1 11.57 10.1007/s10681-017-1926-0 NA NA t3659.T001333 4 length Interval mapping CS-PMR1 × ‘Santou’ F8 SSR12 NA 0 0 SSR2697 0 0 30.4 5.17 10.1007/s10681-017-1926-0 NA NA t3659.T001334 4 diameter Interval mapping CS-PMR1 × ‘Santou’ F8 SSR3299 NA 0 0 CSN310 0 0 43.4 4.11 10.1007/s10681-017-1926-0 NA NA t3659.T001335 4 diameter Interval mapping CS-PMR1 × ‘Santou’ F8 SSR7198 NA 0 0 CMN01_74 0 0 22.5 4.14 10.1007/s10681-017-1926-0 NA NA t3659.T001336 4 fld ratio of length to diameter Interval mapping CS-PMR1 × ‘Santou’ F8 SSR10134 NA 0 0 CSN220 0 0 39.2 5.06 10.1007/s10681-017-1926-0 NA NA t3659.T001337 4 fld ratio of length to diameter Interval mapping CS-PMR1 × ‘Santou’ F8 SSR231 NA 0 0 SSR5723 0 0 65.5 7.97 10.1007/s10681-017-1926-0 NA NA t3659.T001338 4 fld ratio of length to diameter Interval mapping CS-PMR1 × ‘Santou’ F8 SSR5748 NA 0 0 SSR3084 0 0 0 3.14 10.1007/s10681-017-1926-0 NA NA t3659.T001339 4 fld ratio of length to diameter Interval mapping CS-PMR1 × ‘Santou’ F8 SSR3299 NA 0 0 CU2239b 0 0 41.1 13.63 10.1007/s10681-017-1926-0 NA NA t3659.T001340 4 fld ratio of length to diameter Interval mapping CS-PMR1 × ‘Santou’ F8 SSR2803 NA 0 0 SSR2697 0 0 57.8 6.26 10.1007/s10681-017-1926-0 NA NA t3659.T001341 4 length Interval mapping CS-PMR1 × ‘Santou’ F8 SSR10134 NA 0 0 CSN220 0 0 39.2 10.38 10.1007/s10681-017-1926-0 NA NA t3659.T001342 4 length Interval mapping CS-PMR1 × ‘Santou’ F8 SSR231 NA 0 0 SSR262 0 0 83.6 8.04 10.1007/s10681-017-1926-0 NA NA t3659.T001343 4 length Interval mapping CS-PMR1 × ‘Santou’ F8 SSR13504 NA 0 0 ECM129 0 0 28.3 3.81 10.1007/s10681-017-1926-0 NA NA t3659.T001344 4 length Interval mapping CS-PMR1 × ‘Santou’ F8 SSR2693 NA 0 0 SSR2895 0 0 84.3 3.74 10.1007/s10681-017-1926-0 NA NA t3659.T001345 4 diameter Interval mapping CS-PMR1 × ‘Santou’ F8 SSR289 NA 0 0 SSR11596 0 0 37.7 10.6 10.1007/s10681-017-1926-0 NA NA t3659.T001346 4 diameter Interval mapping CS-PMR1 × ‘Santou’ F8 SSR772 NA 0 0 SSR2459 0 0 95.1 11.82 10.1007/s10681-017-1926-0 NA NA t3659.T001347 4 diameter Interval mapping CS-PMR1 × ‘Santou’ F8 SSR19 NA 0 0 CMN174 0 0 30.8 5.61 10.1007/s10681-017-1926-0 NA NA t3659.T001348 4 fld ratio of length to diameter Interval mapping CS-PMR1 × ‘Santou’ F8 SSR10134 NA 0 0 CSN220 0 0 42.6 6.7 10.1007/s10681-017-1926-0 NA NA t3659.T001349 4 fld ratio of length to diameter Interval mapping CS-PMR1 × ‘Santou’ F8 SSR231 NA 0 0 SSR5723 0 0 65.5 10.91 10.1007/s10681-017-1926-0 NA NA t3659.T001350 4 fld ratio of length to diameter Interval mapping CS-PMR1 × ‘Santou’ F8 SSR13504 NA 0 0 CMTC160a 0 0 35.7 11.98 10.1007/s10681-017-1926-0 NA NA t3659.T001351 4 fpd ratio of placenta diameter to fruit diameter Interval mapping CS-PMR1 × ‘Santou’ F8 CM55 NA 0 0 CSWTA05 0 0 12.6 9.52 10.1007/s10681-017-1926-0 NA NA t3659.T001352 4 fpd ratio of placenta diameter to fruit diameter Interval mapping CS-PMR1 × ‘Santou’ F8 SSR231 NA 0 0 SSR5723 0 0 66.5 8.28 10.1007/s10681-017-1926-0 NA NA t3659.T001353 4 fpd ratio of placenta diameter to fruit diameter Interval mapping CS-PMR1 × ‘Santou’ F8 ECM115 NA 0 0 CSN242 0 0 28.3 4.92 10.1007/s10681-017-1926-0 NA NA t3659.T001354 4 fpd ratio of placenta diameter to fruit diameter Interval mapping CS-PMR1 × ‘Santou’ F8 SSR5946 NA 0 0 SSR3357 0 0 92.8 3 10.1007/s10681-017-1926-0 NA NA t3659.T001355 4 wart size Interval mapping CS-PMR1 × ‘Santou’ F8 SSR7405 NA 0 0 CU742 0 0 41.6 5.16 10.1007/s10681-017-1926-0 NA NA t3659.T001356 4 wart size Interval mapping CS-PMR1 × ‘Santou’ F8 CSN159 NA 0 0 SSR2459 0 0 95.1 16.67 10.1007/s10681-017-1926-0 NA NA t3659.T001357 4 wart density Interval mapping CS-PMR1 × ‘Santou’ F8 SSR2803 NA 0 0 CSJCT42 0 0 32.8 4.36 10.1007/s10681-017-1926-0 NA NA t3659.T001358 4 wart density Interval mapping CS-PMR1 × ‘Santou’ F8 SSR11439 NA 0 0 SSR2459 0 0 91.2 9.8 10.1007/s10681-017-1926-0 NA NA t3659.T001359 4 wart density Interval mapping CS-PMR1 × ‘Santou’ F8 SSR2385 NA 0 0 CMN01_74 0 0 31.1 4.08 10.1007/s10681-017-1926-0 NA NA t3659.T001360 4 length Interval mapping CS-PMR1 × ‘Santou’ F8 SSR10134 NA 0 0 CSN220 0 0 41.6 13.99 10.1007/s10681-017-1926-0 NA NA t3659.T001361 4 length Interval mapping CS-PMR1 × ‘Santou’ F8 SSR231 NA 0 0 SSR11253 0 0 74.8 6.36 10.1007/s10681-017-1926-0 NA NA t3659.T001362 4 length Interval mapping CS-PMR1 × ‘Santou’ F8 SSR289 NA 0 0 CMTC160a 0 0 39.1 6.72 10.1007/s10681-017-1926-0 NA NA t3659.T001363 4 length Interval mapping CS-PMR1 × ‘Santou’ F8 CMTCN56 NA 0 0 SSR28327 0 0 59.8 3.52 10.1007/s10681-017-1926-0 NA NA t3659.T001364 4 length Interval mapping CS-PMR1 × ‘Santou’ F8 SSR2693 NA 0 0 SSR11439 0 0 72.1 2.9 10.1007/s10681-017-1926-0 NA NA t3659.T001365 4 diameter Interval mapping CS-PMR1 × ‘Santou’ F8 SSR3299 NA 0 0 SSR11596 0 0 42 6.05 10.1007/s10681-017-1926-0 NA NA t3659.T001366 4 diameter Interval mapping CS-PMR1 × ‘Santou’ F8 SSR16936 NA 0 0 CSN157 0 0 28.4 6.62 10.1007/s10681-017-1926-0 NA NA t3659.T001367 4 diameter Interval mapping CS-PMR1 × ‘Santou’ F8 CMN05_87 NA 0 0 SSR4847 0 0 24.8 3.82 10.1007/s10681-017-1926-0 NA NA t3659.T001368 4 diameter Interval mapping CS-PMR1 × ‘Santou’ F8 SSR19665 NA 0 0 SSR21743 0 0 48.3 5.39 10.1007/s10681-017-1926-0 NA NA t3659.T001369 4 fld ratio of length to diameter Interval mapping CS-PMR1 × ‘Santou’ F8 SSR10134 NA 0 0 CSN220 0 0 46.2 10.9 10.1007/s10681-017-1926-0 NA NA t3659.T001370 4 fld ratio of length to diameter Interval mapping CS-PMR1 × ‘Santou’ F8 SSR220 NA 0 0 SSR11253 0 0 63.5 8.4 10.1007/s10681-017-1926-0 NA NA t3659.T001371 4 fld ratio of length to diameter Interval mapping CS-PMR1 × ‘Santou’ F8 SSR13504 NA 0 0 CMTC160a 0 0 35.7 12.02 10.1007/s10681-017-1926-0 NA NA t3659.T001372 4 fld ratio of length to diameter Interval mapping CS-PMR1 × ‘Santou’ F8 SSR12 NA 0 0 CSN157 0 0 34.8 3.47 10.1007/s10681-017-1926-0 NA NA t3659.T001373 4 shape differences in blossom and stem ends of the fruit Interval mapping CS-PMR1 × ‘Santou’ F8 SSR10134 NA 0 0 CSN220 0 0 42.6 6.6 10.1007/s10681-017-1926-0 NA NA t3659.T001374 4 shape differences in blossom and stem ends of the fruit Interval mapping CS-PMR1 × ‘Santou’ F8 SSR231 NA 0 0 SSR11253 0 0 74.8 7.91 10.1007/s10681-017-1926-0 NA NA t3659.T001375 4 shape differences in blossom and stem ends of the fruit Interval mapping CS-PMR1 × ‘Santou’ F8 CU1458 NA 0 0 SSR11468 0 0 40.1 14.37 10.1007/s10681-017-1926-0 NA NA t3659.T001376 4 shape differences in blossom and stem ends of the fruit Interval mapping CS-PMR1 × ‘Santou’ F8 CU1830 NA 0 0 SSR2697 0 0 53.5 4.36 10.1007/s10681-017-1926-0 NA NA t3659.T001377 4 shape differences in blossom and stem ends of the fruit Interval mapping CS-PMR1 × ‘Santou’ F8 CMN21_88 NA 0 0 SSR190 0 0 3.4 4.54 10.1007/s10681-017-1926-0 NA NA t3659.T001378 4 shape differences in blossom and stem ends of the fruit Interval mapping CS-PMR1 × ‘Santou’ F8 CMN21_80 NA 0 0 CSN251 0 0 0 5.57 10.1007/s10681-017-1926-0 NA NA t3659.T001379 4 shape differences in blossom and stem ends of the fruit Interval mapping CS-PMR1 × ‘Santou’ F8 CSJCT435 NA 0 0 SSR21558 0 0 0 3.78 10.1007/s10681-017-1926-0 NA NA t3659.T001380 4 shape differences in blossom and stem ends of the fruit Interval mapping CS-PMR1 × ‘Santou’ F8 CSN183 NA 0 0 SSR477 0 0 56.8 5.21 10.1007/s10681-017-1926-0 NA NA t3659.T001381 4 shape differences in blossom and stem ends of the fruit Interval mapping CS-PMR1 × ‘Santou’ F8 CSN310 NA 0 0 SSR11596 0 0 48.1 3.07 10.1007/s10681-017-1926-0 NA NA t3659.T001382 4 shape differences in blossom and stem ends of the fruit Interval mapping CS-PMR1 × ‘Santou’ F8 CSN002 NA 0 0 CSN284 0 0 20.4 5.75 10.1007/s10681-017-1926-0 NA NA t3659.T001383 4 shape differences in blossom and stem ends of the fruit Interval mapping CS-PMR1 × ‘Santou’ F8 CSN157 NA 0 0 SSR15737 0 0 41 3.76 10.1007/s10681-017-1926-0 NA NA t3659.T001384 4 shape differences in blossom and stem ends of the fruit Interval mapping CS-PMR1 × ‘Santou’ F8 CSWTA13 NA 0 0 SSR11439 0 0 63.4 4.66 10.1007/s10681-017-1926-0 NA NA t3659.T001385 4 shape differences in blossom and stem ends of the fruit Interval mapping CS-PMR1 × ‘Santou’ F8 CU886 NA 0 0 SSR12510 0 0 77 5.33 10.1007/s10681-017-1926-0 NA NA t3659.T001386 4 shape differences in blossom and stem ends of the fruit Interval mapping CS-PMR1 × ‘Santou’ F8 SSR15802 NA 0 0 SSR3357 0 0 93.8 4.01 10.1007/s10681-017-1926-0 NA NA t3659.T001387 4 shape differences in blossom and stem ends of the fruit Interval mapping CS-PMR1 × ‘Santou’ F8 SSR10134 NA 0 0 CSN220 0 0 42.6 6.31 10.1007/s10681-017-1926-0 NA NA t3659.T001388 4 shape differences in blossom and stem ends of the fruit Interval mapping CS-PMR1 × ‘Santou’ F8 SSR231 NA 0 0 SSR11253 0 0 74.8 6.02 10.1007/s10681-017-1926-0 NA NA t3659.T001389 4 shape differences in blossom and stem ends of the fruit Interval mapping CS-PMR1 × ‘Santou’ F8 CU1458 NA 0 0 SSR13275 0 0 40.1 17.09 10.1007/s10681-017-1926-0 NA NA t3659.T001390 4 shape differences in blossom and stem ends of the fruit Interval mapping CS-PMR1 × ‘Santou’ F8 CU1830 NA 0 0 SSR10368 0 0 53.5 5.78 10.1007/s10681-017-1926-0 NA NA t3659.T001391 4 shape differences in blossom and stem ends of the fruit Interval mapping CS-PMR1 × ‘Santou’ F8 SSR3049 NA 0 0 CSN251 0 0 11.9 3.84 10.1007/s10681-017-1926-0 NA NA t3659.T001392 4 shape differences in blossom and stem ends of the fruit Interval mapping CS-PMR1 × ‘Santou’ F8 SSR15731 NA 0 0 CU1830 0 0 41 3.27 10.1007/s10681-017-1926-0 NA NA t3659.T001393 4 shape differences in blossom and stem ends of the fruit Interval mapping CS-PMR1 × ‘Santou’ F8 SSR11439 NA 0 0 SSR20434 0 0 92.2 6.06 10.1007/s10681-017-1926-0 NA NA t3659.T001394 4 shape differences in blossom and stem ends of the fruit Interval mapping CS-PMR1 × ‘Santou’ F8 CU1094 NA 0 0 SSR3076 0 0 56.8 2.88 10.1007/s10681-017-1926-0 NA NA t3659.T001395 4 shape differences in blossom and stem ends of the fruit Interval mapping CS-PMR1 × ‘Santou’ F8 CSN242 NA 0 0 CMTC160a 0 0 41.1 3.59 10.1007/s10681-017-1926-0 NA NA t3659.T001396 4 female flowering time Interval mapping WI7200 × WI7167 F2:3 UW083752 NA 0 0 UW085369 0 0 96 5.5 10.1007/s00122-017-2908-2 NA NA t3659.T001397 4 female flowering time Interval mapping WI7200 × WI7167 F2:3 UW083752 NA 0 0 UW085369 0 0 96 3.8 10.1007/s00122-017-2908-2 NA NA t3659.T001398 4 female flowering time Interval mapping WI7200 × WI7167 F2:3 SSR16695 NA 0 0 SSR03222 0 0 94 8.9 10.1007/s00122-017-2908-2 NA NA t3659.T001399 4 female flowering time Interval mapping WI7200 × WI7167 F2:3 UW085063 NA 0 0 SSR15818 0 0 96.5 4.3 10.1007/s00122-017-2908-2 NA NA t3659.T001400 4 female flowering time Interval mapping WI7200 × WI7167 F2:3 UW085063 NA 0 0 Parthindel122 0 0 96.5 11.6 10.1007/s00122-017-2908-2 NA NA t3659.T001401 4 female flowering time Interval mapping WI7200 × WI7167 F2:3 UW085063 NA 0 0 SSR01826 0 0 96.5 7.2 10.1007/s00122-017-2908-2 NA NA t3659.T001402 4 female flowering time Interval mapping WI7200 × WI7167 F2:3 SSR16020 NA 0 0 UW085020 0 0 26 39.6 10.1007/s00122-017-2908-2 NA NA t3659.T001403 4 female flowering time Interval mapping WI7200 × WI7167 F2:3 SSR16020 NA 0 0 UW085020 0 0 26 28.3 10.1007/s00122-017-2908-2 NA NA t3659.T001404 4 female flowering time Interval mapping WI7200 × WI7167 F2:3 SSR16020 NA 0 0 UW085020 0 0 24 53.9 10.1007/s00122-017-2908-2 NA NA t3659.T001405 4 male flowering time Interval mapping WI7200 × WI7167 F2:3 SSR07167 NA 0 0 UW083853 0 0 94 10.1 10.1007/s00122-017-2908-2 NA NA t3659.T001406 4 male flowering time Interval mapping WI7200 × WI7167 F2:3 SSR00004 NA 0 0 UW085020 0 0 26 61.3 10.1007/s00122-017-2908-2 NA NA t3659.T001407 4 male flowering time Interval mapping WI7200 × WI7167 F2:3 SSR16020 NA 0 0 UW085020 0 0 26 84.3 10.1007/s00122-017-2908-2 NA NA t3659.T001408 4 mature fruit length Interval mapping WI7200 × WI7167 F2:3 UW034870 NA 0 0 SSR03222 0 0 74 4.5 10.1007/s00122-017-2908-2 NA NA t3659.T001409 4 mature fruit length Interval mapping WI7200 × WI7167 F2:3 SSR23725 NA 0 0 SSR16238 0 0 86 7.1 10.1007/s00122-017-2908-2 NA NA t3659.T001410 4 mature fruit length Interval mapping WI7200 × WI7167 F2:3 SSR04530 NA 0 0 ParthIndel150 0 0 90 13.9 10.1007/s00122-017-2908-2 NA NA t3659.T001411 4 mature fruit length Interval mapping WI7200 × WI7167 F2:3 SSR04530 NA 0 0 ParthIndel150 0 0 88 16.7 10.1007/s00122-017-2908-2 NA NA t3659.T001412 4 mature fruit length Interval mapping WI7200 × WI7167 F2:3 SSR11043 NA 0 0 SSR19993 0 0 86 4.8 10.1007/s00122-017-2908-2 NA NA t3659.T001413 4 mature fruit length Interval mapping WI7200 × WI7167 F2:3 UW085236 NA 0 0 UW029413 0 0 86 3.6 10.1007/s00122-017-2908-2 NA NA t3659.T001414 4 mature fruit length Interval mapping WI7200 × WI7167 F2:3 UW085063 NA 0 0 SSR01826 0 0 96 15.4 10.1007/s00122-017-2908-2 NA NA t3659.T001415 4 mature fruit length Interval mapping WI7200 × WI7167 F2:3 UW085063 NA 0 0 SSR01826 0 0 97.5 17.6 10.1007/s00122-017-2908-2 NA NA t3659.T001416 4 mature fruit length Interval mapping WI7200 × WI7167 F2:3 UW085063 NA 0 0 SSR01826 0 0 96.5 20.6 10.1007/s00122-017-2908-2 NA NA t3659.T001417 4 mature fruit length Interval mapping WI7200 × WI7167 F2:3 UW085170 NA 0 0 UW043074 0 0 42 19.1 10.1007/s00122-017-2908-2 NA NA t3659.T001418 4 mature fruit length Interval mapping WI7200 × WI7167 F2:3 UW084429 NA 0 0 UW043074 0 0 58 20.5 10.1007/s00122-017-2908-2 NA NA t3659.T001419 4 mature fruit length Interval mapping WI7200 × WI7167 F2:3 UW084429 NA 0 0 UW043074 0 0 58 12.7 10.1007/s00122-017-2908-2 NA NA t3659.T001420 4 mature fruit length Interval mapping WI7200 × WI7167 F2:3 SSR11742 NA 0 0 SSR16591 0 0 38 4.7 10.1007/s00122-017-2908-2 NA NA t3659.T001421 4 mature fruit diameter Interval mapping WI7200 × WI7167 F2:3 SSR03886 NA 0 0 UW073988 0 0 32 5.7 10.1007/s00122-017-2908-2 NA NA t3659.T001422 4 mature fruit diameter Interval mapping WI7200 × WI7167 F2:3 Parthindel79 NA 0 0 UW062643 0 0 32 11 10.1007/s00122-017-2908-2 NA NA t3659.T001423 4 mature fruit diameter Interval mapping WI7200 × WI7167 F2:3 SSR03886 NA 0 0 UW062597 0 0 38 24.1 10.1007/s00122-017-2908-2 NA NA t3659.T001424 4 mature fruit diameter Interval mapping WI7200 × WI7167 F2:3 UW023521 NA 0 0 UW083958 0 0 56 3.8 10.1007/s00122-017-2908-2 NA NA t3659.T001425 4 mature fruit diameter Interval mapping WI7200 × WI7167 F2:3 SSR04530 NA 0 0 SSR04628 0 0 88 8.4 10.1007/s00122-017-2908-2 NA NA t3659.T001426 4 mature fruit diameter Interval mapping WI7200 × WI7167 F2:3 UW085236 NA 0 0 UW029413 0 0 82 4 10.1007/s00122-017-2908-2 NA NA t3659.T001427 4 mature fruit diameter Interval mapping WI7200 × WI7167 F2:3 UW085236 NA 0 0 UW029413 0 0 86 9.2 10.1007/s00122-017-2908-2 NA NA t3659.T001428 4 mature fruit diameter Interval mapping WI7200 × WI7167 F2:3 UW085063 NA 0 0 Parthindel122 0 0 104 9.5 10.1007/s00122-017-2908-2 NA NA t3659.T001429 4 mature fruit diameter Interval mapping WI7200 × WI7167 F2:3 UW083907 NA 0 0 Parthindel122 0 0 96 4.4 10.1007/s00122-017-2908-2 NA NA t3659.T001430 4 mature fruit diameter Interval mapping WI7200 × WI7167 F2:3 SSR16451 NA 0 0 UW084429 0 0 44 36.6 10.1007/s00122-017-2908-2 NA NA t3659.T001431 4 mature fruit diameter Interval mapping WI7200 × WI7167 F2:3 UW084429 NA 0 0 UW043074 0 0 52 6.4 10.1007/s00122-017-2908-2 NA NA t3659.T001432 4 mature fruit diameter Interval mapping WI7200 × WI7167 F2:3 SSR00134 NA 0 0 UW084429 0 0 50 16.4 10.1007/s00122-017-2908-2 NA NA t3659.T001433 4 length-to-diameter ratio Interval mapping WI7200 × WI7167 F2:3 UW084276 NA 0 0 Parthindel79 0 0 24 21.1 10.1007/s00122-017-2908-2 NA NA t3659.T001434 4 length-to-diameter ratio Interval mapping WI7200 × WI7167 F2:3 Parthindel79 NA 0 0 UW062597 0 0 30 7.6 10.1007/s00122-017-2908-2 NA NA t3659.T001435 4 length-to-diameter ratio Interval mapping WI7200 × WI7167 F2:3 UW084276 NA 0 0 UW029657 0 0 20 8.1 10.1007/s00122-017-2908-2 NA NA t3659.T001436 4 length-to-diameter ratio Interval mapping WI7200 × WI7167 F2:3 FPPSSR22 NA 0 0 UW085037 0 0 76 11.1 10.1007/s00122-017-2908-2 NA NA t3659.T001437 4 length-to-diameter ratio Interval mapping WI7200 × WI7167 F2:3 UW034870 NA 0 0 UW083752 0 0 66 5.7 10.1007/s00122-017-2908-2 NA NA t3659.T001438 4 length-to-diameter ratio Interval mapping WI7200 × WI7167 F2:3 UW034870 NA 0 0 UW085037 0 0 70 10.5 10.1007/s00122-017-2908-2 NA NA t3659.T001439 4 length-to-diameter ratio Interval mapping WI7200 × WI7167 F2:3 SSR23725 NA 0 0 ParthIndel150 0 0 86 14.2 10.1007/s00122-017-2908-2 NA NA t3659.T001440 4 length-to-diameter ratio Interval mapping WI7200 × WI7167 F2:3 SSR23725 NA 0 0 ParthIndel150 0 0 84 15.7 10.1007/s00122-017-2908-2 NA NA t3659.T001441 4 length-to-diameter ratio Interval mapping WI7200 × WI7167 F2:3 SSR04530 NA 0 0 ParthIndel150 0 0 92 17.7 10.1007/s00122-017-2908-2 NA NA t3659.T001442 4 length-to-diameter ratio Interval mapping WI7200 × WI7167 F2:3 UW083907 NA 0 0 fl5indel_13 0 0 96 60.7 10.1007/s00122-017-2908-2 NA NA t3659.T001443 4 length-to-diameter ratio Interval mapping WI7200 × WI7167 F2:3 UW083907 NA 0 0 SSR14180 0 0 96 40 10.1007/s00122-017-2908-2 NA NA t3659.T001444 4 length-to-diameter ratio Interval mapping WI7200 × WI7167 F2:3 UW083907 NA 0 0 fl5indel_13 0 0 96 78.9 10.1007/s00122-017-2908-2 NA NA t3659.T001445 4 length-to-diameter ratio Interval mapping WI7200 × WI7167 F2:3 fft6indel_12 NA 0 0 UW085020 0 0 24 3.3 10.1007/s00122-017-2908-2 NA NA t3659.T001446 4 length-to-diameter ratio Interval mapping WI7200 × WI7167 F2:3 fft6indel_9 NA 0 0 SSR00004 0 0 20 11.7 10.1007/s00122-017-2908-2 NA NA t3659.T001447 4 length-to-diameter ratio Interval mapping WI7200 × WI7167 F2:3 Parthindel74 NA 0 0 fft6indel_8 0 0 16 4.3 10.1007/s00122-017-2908-2 NA NA t3659.T001448 4 fruit weight Interval mapping WI7200 × WI7167 F2:3 SSR03886 NA 0 0 UW085428 0 0 38 5 10.1007/s00122-017-2908-2 NA NA t3659.T001449 4 fruit weight Interval mapping WI7200 × WI7167 F2:3 SSR04530 NA 0 0 ParthIndel150 0 0 88 12.8 10.1007/s00122-017-2908-2 NA NA t3659.T001450 4 fruit weight Interval mapping WI7200 × WI7167 F2:3 UW085236 NA 0 0 UW029413 0 0 86 4.7 10.1007/s00122-017-2908-2 NA NA t3659.T001451 4 fruit weight Interval mapping WI7200 × WI7167 F2:3 SSR00134 NA 0 0 UW043074 0 0 52 14.9 10.1007/s00122-017-2908-2 NA NA t3659.T001452 4 fruit number Interval mapping WI7200 × WI7167 F2:3 SSR03886 NA 0 0 UW085428 0 0 36 4.2 10.1007/s00122-017-2908-2 NA NA t3659.T001453 4 fruit number Interval mapping WI7200 × WI7167 F2:3 SSR04530 NA 0 0 ParthIndel150 0 0 86 9.1 10.1007/s00122-017-2908-2 NA NA t3659.T001454 4 fruit number Interval mapping WI7200 × WI7167 F2:3 SSR14290 NA 0 0 SSR03768 0 0 42 17.3 10.1007/s00122-017-2908-2 NA NA t3659.T001455 4 fruit number Interval mapping WI7200 × WI7167 F2:3 SSR16591 NA 0 0 SSR05682 0 0 48 3.5 10.1007/s00122-017-2908-2 NA NA t3659.T001456 4 hypocotyl length Hy9 NA 0 0 hy38 0 0 24 57.3 10.1007/s00122-017-2908-2 NA NA t3659.T001457 Fl2.1 4 Fruit length(2021 spring) QTL IciMapping RIL population Recombinant inbred lines NA 2 11318282 0 2 11831887 0 3.58 7.138 10.3389/fpls.2023.1208675 NA NA t3659.T001458 Fl2.2 4 Fruit length(2021 spring) QTL IciMapping RIL population Recombinant inbred lines NA 2 18154286 0 2 18620538 0 3.34 7.32 10.3389/fpls.2023.1208675 NA NA t3659.T001459 Fl4.1 4 Fruit length(2021 spring) QTL IciMapping RIL population Recombinant inbred lines NA 4 12862726 0 4 14137628 0 7.82 17.52 10.3389/fpls.2023.1208675 NA NA t3659.T001460 Fl6.1 4 Fruit length(2021 spring) QTL IciMapping RIL population Recombinant inbred lines NA 6 24654259 0 6 24899860 0 5.34 10.96 10.3389/fpls.2023.1208675 NA NA t3659.T001461 Fl2.1 4 Fruit length(2022 autumn) QTL IciMapping RIL population Recombinant inbred lines NA 2 11318282 0 2 11831887 0 5.79 12.56 10.3389/fpls.2023.1208675 NA NA t3659.T001462 Fl4.2 4 Fruit length(2022 autumn) QTL IciMapping RIL population Recombinant inbred lines NA 4 12862726 0 4 14137628 0 6.71 15.71 10.3389/fpls.2023.1208675 NA NA t3659.T001463 Fl6.2 4 Fruit length(2022 autumn) QTL IciMapping RIL population Recombinant inbred lines NA 6 24654259 0 6 24899860 0 3.78 8.04 10.3389/fpls.2023.1208675 NA NA t3659.T001464 qOL1.1 4 Ovary Length A multiple-QTL mapping (MQM) RIL mapping Recombinant inbred lines UW044821 NA 1 2 0 UW083977 1 12 0 4.27 10.3390/genes14061133 NA NA t3659.T001465 qOL3.1 4 Ovary Length A multiple-QTL mapping (MQM) RIL mapping Recombinant inbred lines SSR20270 NA 3 28 0 SSR18311 3 32 0 3.72 10.3390/genes14061133 NA NA t3659.T001466 qOL4.1 4 Ovary Length A multiple-QTL mapping (MQM) RIL mapping Recombinant inbred lines SSR20307 NA 4 14 0 UW029413 4 16 0 11.51 10.3390/genes14061133 NA NA t3659.T001467 qOL5.1 4 Ovary Length A multiple-QTL mapping (MQM) RIL mapping Recombinant inbred lines SSR15321 NA 5 21 0 UW013295 5 25 0 3.7 10.3390/genes14061133 NA NA t3659.T001468 qOL6.1 4 Ovary Length A multiple-QTL mapping (MQM) RIL mapping Recombinant inbred lines SSR16005 NA 6 23 0 SSR00045 6 28 0 4.21 10.3390/genes14061133 NA NA t3659.T001469 qOD6.1 4 Ovary Diameter A multiple-QTL mapping (MQM) RIL mapping Recombinant inbred lines SSR19970 NA 6 25 0 SSR18251 6 30 0 4.87 10.3390/genes14061133 NA NA t3659.T001470 qOHN3.1 4 Ovary hypanthium neck width A multiple-QTL mapping (MQM) RIL mapping Recombinant inbred lines SSR03409 NA 3 10 0 SSR07131 3 34 0 3.75 10.3390/genes14061133 NA NA t3659.T001471 qOHN4.1 4 Ovary hypanthium neck width A multiple-QTL mapping (MQM) RIL mapping Recombinant inbred lines SSR20307 NA 4 14 0 UW084951 4 17 0 11.23 10.3390/genes14061133 NA NA t3659.T001472 qOHN6.1 4 Ovary hypanthium neck width A multiple-QTL mapping (MQM) RIL mapping Recombinant inbred lines SSR19970 NA 6 25 0 SSR18251 6 30 0 4.91 10.3390/genes14061133 NA NA t3659.T001473 qFSD6.1 4 Fruit spine density A multiple-QTL mapping (MQM) RIL mapping Recombinant inbred lines SSR01234 NA 6 28 0 SSR18251 6 30 0 18.87 10.3390/genes14061133 NA NA t3659.T001474 qMFL1.1 4 Mature Fruit length A multiple-QTL mapping (MQM) RIL mapping Recombinant inbred lines SSR04304 NA 1 2 0 UW062539 1 9 0 7.34 10.3390/genes14061133 NA NA t3659.T001475 qMFL3.1 4 Mature Fruit length A multiple-QTL mapping (MQM) RIL mapping Recombinant inbred lines SSR10697 NA 3 30 0 SSR07131 3 34 0 4.79 10.3390/genes14061133 NA NA t3659.T001476 qMFL4.1 4 Mature Fruit length A multiple-QTL mapping (MQM) RIL mapping Recombinant inbred lines SSR20307 NA 4 14 0 UW084951 4 17 0 6.93 10.3390/genes14061133 NA NA t3659.T001477 qMFL6.1 4 Mature Fruit length A multiple-QTL mapping (MQM) RIL mapping Recombinant inbred lines C31 NA 6 22 0 SSR15316 6 27 0 6.02 10.3390/genes14061133 NA NA t3659.T001478 qFNL1.1 4 Fruit neck length A multiple-QTL mapping (MQM) RIL mapping Recombinant inbred lines SSR05793 NA 1 3 0 SSR10134 1 8 0 7.8 10.3390/genes14061133 NA NA t3659.T001479 qFNL3.1 4 Fruit neck length A multiple-QTL mapping (MQM) RIL mapping Recombinant inbred lines SSR23725 NA 3 30 0 SSR07131 3 34 0 5.61 10.3390/genes14061133 NA NA t3659.T001480 qFNL4.1 4 Fruit neck length A multiple-QTL mapping (MQM) RIL mapping Recombinant inbred lines SSR16892 NA 4 6 0 UW084951 4 17 0 5.37 10.3390/genes14061133 NA NA t3659.T001481 qFNL5.1 4 Fruit neck length A multiple-QTL mapping (MQM) RIL mapping Recombinant inbred lines SSR18792 NA 5 15 0 UW084826 5 31 0 3.69 10.3390/genes14061133 NA NA t3659.T001482 qFNL6.1 4 Fruit neck length A multiple-QTL mapping (MQM) RIL mapping Recombinant inbred lines SSR17818 NA 6 23 0 SSR20599 6 27 0 5.81 10.3390/genes14061133 NA NA t3659.T001483 qMFD5.1 4 Mature Fruit diameter A multiple-QTL mapping (MQM) RIL mapping Recombinant inbred lines 15InDel55 NA 5 3 0 UW085322 5 30 0 4.89 10.3390/genes14061133 NA NA t3659.T001484 qFTH2.1 4 Fruit flesh thickness A multiple-QTL mapping (MQM) RIL mapping Recombinant inbred lines UW085249 NA 2 15 0 SSR22653 2 19 0 5.02 10.3390/genes14061133 NA NA t3659.T001485 qFTH5.1 4 Fruit flesh thickness A multiple-QTL mapping (MQM) RIL mapping Recombinant inbred lines 15InDel40 NA 5 2 0 UW084826 5 31 0 3.45 10.3390/genes14061133 NA NA t3659.T001486 qFTH7.1 4 Fruit flesh thickness A multiple-QTL mapping (MQM) RIL mapping Recombinant inbred lines SSR13188 NA 7 19 0 SSR22901 7 22 0 3.83 10.3390/genes14061133 NA NA t3659.T001487 qSCS5.1 4 Seed cavity size A multiple-QTL mapping (MQM) RIL mapping Recombinant inbred lines UW084138 NA 5 22 0 SSR16068 5 25 0 6.63 10.3390/genes14061133 NA NA t3659.T001488 qSCS6.1 4 Seed cavity size A multiple-QTL mapping (MQM) RIL mapping Recombinant inbred lines SSR19970 NA 6 25 0 SSR23639 6 31 0 4.97 10.3390/genes14061133 NA NA t3659.T001489 qMFT1.1 4 Male flowering time A multiple-QTL mapping (MQM) RIL mapping Recombinant inbred lines UW085274 NA 1 21 0 SSR16841 1 25 0 4.08 10.3390/genes14061133 NA NA t3659.T001490 qFFT1.1 4 Female flowering time A multiple-QTL mapping (MQM) RIL mapping Recombinant inbred lines SSR20760 NA 1 3 0 UW024133 1 4 0 15.39 10.3390/genes14061133 NA NA t3659.T001491 pm1.1 1 Powder mildew resistance on the assay at 20 ℃ Composite interval mapping F2:3 population F2:3 population NA 0 0 0 0 55.7 3.78 0.02 10.1270/jsbbs.20141 NA NA t3659.T001492 pm5.3 1 Powder mildew resistance on the assay at 20 ℃ Composite interval mapping F2:3 population F2:3 population NA 0 0 0 0 70.8 48.77 0.37 10.1270/jsbbs.20141 NA NA t3659.T001493 pm5.3 1 Powder mildew resistance on the assay at 25℃ Composite interval mapping F2:3 population F2:3 population NA 0 0 0 0 70.8 69.72 0.43 10.1270/jsbbs.20141 NA NA t3659.T001494 4 Fruit diameter Composite interval mapping ‘9930’ × ‘EU224’ F2 c01b007-c01b009 NA 1 1 0 0 0 4.46 4.07 10.1186/s12870-024-06000-9 NA NA t3659.T001495 1 Low temperature tolerance QTL mapping ‘CsIVF0106’ × ‘CsIVF0168’ RIL SSR14340 NA 0 0 1_9333102 0 0 16.4 - 33.1 2.85, 6.34 10.1007/s44154-024-00191-9 NA NA t3659.T001496 1 Low temperature tolerance Fine mapping ‘CsIVF0106’ × ‘CsIVF0168’ RIL SSR16869 NA 0 0 1_8746588 0 0 26.6 - 31 10.1007/s44154-024-00191-9 NA NA t3659.T001497 1 Low temperature tolerance QTL mapping ‘CsIVF0106’ × ‘CsIVF0168’ RIL 3_ 11,705,627 NA 0 0 3_14190775 0 0 93.2 - 101.2 6.34, 3.22 10.1007/s44154-024-00191-9 NA NA t3659.T001498 1 Low temperature tolerance Fine mapping ‘CsIVF0106’ × ‘CsIVF0168’ RIL 3_12762159 NA 0 0 3_14190775 0 0 93.2 - 97.1 10.1007/s44154-024-00191-9 NA NA t3659.T001499 Cy-1 5 Symptoms 30 dpi Composite interval mapping SHF × No.44 F2 S1_24837399 NA 1 24837399 0 0 0 71.4–75.8 15.1 10.1186/s12870-024-05591-7 NA NA t3659.T001500 Cy-1 5 Viral accumulation 30 dpi Composite interval mapping SHF × No.44 F2 S1_24837399 NA 1 24837399 0 0 0 71.4–82.9 9.2 10.1186/s12870-024-05591-7 NA NA t3659.T001501 Cy-1 5 Symptoms 30 dpi Composite interval mapping SHF × No.44 F2 S1_24211834 NA 1 24211834 0 0 0 56.7–68.9 13.7 10.1186/s12870-024-05591-7 NA NA t3659.T001502 Cy-1 5 Viral accumulation 30 dpi Composite interval mapping SHF × No.44 F2 S1_25309314 NA 1 25309314 0 0 0 56.7–68.9 8.1 10.1186/s12870-024-05591-7 NA NA t3659.T001503 cy-2 5 Symptoms 30 dpi Composite interval mapping SHF × No.44 F2 S2_17866822 NA 2 17866822 0 0 0 60.4–63.4 22.2 10.1186/s12870-024-05591-7 NA NA t3659.T001504 cy-2 5 Viral accumulation 30 dpi Composite interval mapping SHF × No.44 F2 S2_17323252 NA 2 17323252 0 0 0 50.1–70.5 10.5 10.1186/s12870-024-05591-7 NA NA t3659.T001505 cy-2 5 Symptoms 30 dpi Composite interval mapping SHF × No.44 F2 S2_17695694 NA 2 17695694 0 0 0 59.4–64.9 21.6 10.1186/s12870-024-05591-7 NA NA t3659.T001506 Cy-6 5 Symptoms 30 dpi Composite interval mapping SHF × No.44 F2 S6_11725560 NA 6 11725560 0 0 0 36.1–46.3 8.1 10.1186/s12870-024-05591-7 NA NA t3659.T001507 Cy-1 1 ToLCNDV-ES resistance Fine mapping SHF × No.44 F2, F3 Cuc25061147-HRM NA 1 0 0 Cuc25270268-KASP marker 0 0 10.1186/s12870-024-05591-7 NA NA t3659.T001508 gRDW3.1 4 Root dry weight GWAS (BLUP) 96 accessions SNP1139794 NA 3 8569196 0 0 0 7.465 10.3389/fpls.2024.1417314 NA NA t3659.T001509 gRDW3.2 4 Root dry weight GWAS (BLUP) 96 accessions SNP1441989 NA 3 24511391 0 0 0 6.079 10.3389/fpls.2024.1417314 NA NA t3659.T001510 gRDW4.1 4 Root dry weight GWAS (BLUP) 96 accessions SNP2031473 NA 4 17438778 0 0 0 6.067 10.3389/fpls.2024.1417314 NA NA t3659.T001511 gRDW5.1 4 Root dry weight GWAS (BLUP) 96 accessions SNP2346947 NA 5 11837699 0 0 0 6.546 10.3389/fpls.2024.1417314 NA NA t3659.T001512 gRFW3.1 4 Root fresh weight GWAS (BLUP) 96 accessions SNP1132006 NA 3 8024627 0 0 0 5.183 10.3389/fpls.2024.1417314 NA NA t3659.T001513 gRFW5.1 4 Root fresh weight GWAS (BLUP) 96 accessions SNP2346816 NA 5 11832145 0 0 0 5.008 10.3389/fpls.2024.1417314 NA NA t3659.T001514 gRFW5.2 4 Root fresh weight GWAS (BLUP) 96 accessions SNP2539259 NA 5 23377178 0 0 0 6.144 10.3389/fpls.2024.1417314 NA NA t3659.T001515 gRDFW3.2 4 Root dry weight/root fresh weight GWAS (BLUP) 96 accessions SNP1434634 NA 3 24163761 0 0 0 7.701 10.3389/fpls.2024.1417314 NA NA t3659.T001516 gRDFW3.3 4 Root dry weight/root fresh weight GWAS (BLUP) 96 accessions SNP1534956 NA 3 29980780 0 0 0 8.262 10.3389/fpls.2024.1417314 NA NA t3659.T001517 gRDFW5.3 4 Root dry weight/root fresh weight GWAS (BLUP) 96 accessions SNP2471314 NA 5 19295896 0 0 0 7.311 10.3389/fpls.2024.1417314 NA NA t3659.T001518 gDRW2.1 4 D-valueof root weight GWAS (BLUP) 96 accessions SNP858559 NA 2 14622245 0 0 0 5.257 10.3389/fpls.2024.1417314 NA NA t3659.T001519 gDRW3.1 4 D-valueof root weight GWAS (BLUP) 96 accessions SNP1139794 NA 3 8569196 0 0 0 6.4 10.3389/fpls.2024.1417314 NA NA t3659.T001520 gDRW3.2 4 D-valueof root weight GWAS (BLUP) 96 accessions SNP1441989 NA 3 24511391 0 0 0 5.451 10.3389/fpls.2024.1417314 NA NA t3659.T001521 gDRW4.1 4 D-valueof root weight GWAS (BLUP) 96 accessions SNP2031473 NA 4 17438778 0 0 0 5.057 10.3389/fpls.2024.1417314 NA NA t3659.T001522 gDRW5.1 4 D-valueof root weight GWAS (BLUP) 96 accessions SNP2347582 NA 5 11858580 0 0 0 5.496 10.3389/fpls.2024.1417314 NA NA t3659.T001523 gDRW6.1 4 D-valueof root weight GWAS (BLUP) 96 accessions SNP2839216 NA 6 10570450 0 0 0 5.531 10.3389/fpls.2024.1417314 NA NA t3659.T001524 gDRW6.2 4 D-valueof root weight GWAS (BLUP) 96 accessions SNP3143631 NA 6 27676677 0 0 0 5.394 10.3389/fpls.2024.1417314 NA NA t3659.T001525 gRFW3.1 4 Root fresh weight GWAS (Fast-LMM) 96 accessions SNP1131997 NA 3 8024380 0 0 0 5.594208905 10.3389/fpls.2024.1417314 NA NA t3659.T001526 gRFW5.2 4 Root fresh weight GWAS (Fast-LMM) 96 accessions SNP2538144 NA 5 23314712 0 0 0 5.765195064 10.3389/fpls.2024.1417314 NA NA t3659.T001527 gRFW6.1 4 Root fresh weight GWAS (Fast-LMM) 96 accessions SNP2825417 NA 6 9847447 0 0 0 6.071349716 10.3389/fpls.2024.1417314 NA NA t3659.T001528 gRDW3.1 4 Root dry weight GWAS (Fast-LMM) 96 accessions SNP1139804 NA 3 8569523 0 0 0 7.279027027 10.3389/fpls.2024.1417314 NA NA t3659.T001529 gRDW3.2 4 Root dry weight GWAS (Fast-LMM) 96 accessions SNP1450125 NA 3 24884634 0 0 0 5.70415557 10.3389/fpls.2024.1417314 NA NA t3659.T001530 gRDW4.1 4 Root dry weight GWAS (Fast-LMM) 96 accessions SNP2031473 NA 4 17438778 0 0 0 6.330809145 10.3389/fpls.2024.1417314 NA NA t3659.T001531 gRDW5.1 4 Root dry weight GWAS (Fast-LMM) 96 accessions SNP2347582 NA 5 11858580 0 0 0 5.521012888 10.3389/fpls.2024.1417314 NA NA t3659.T001532 gRDW6.1 4 Root dry weight GWAS (Fast-LMM) 96 accessions SNP2839216 NA 6 10570450 0 0 0 6.460505823 10.3389/fpls.2024.1417314 NA NA t3659.T001533 gRDW3.1 4 Root dry weight GWAS (Fast-LMM) 96 accessions SNP1139815 NA 3 8569733 0 0 0 6.64068995 10.3389/fpls.2024.1417314 NA NA t3659.T001534 gRDW4.1 4 Root dry weight GWAS (Fast-LMM) 96 accessions SNP2031439 NA 4 17437524 0 0 0 7.078206991 10.3389/fpls.2024.1417314 NA NA t3659.T001535 gRDW5.1 4 Root dry weight GWAS (Fast-LMM) 96 accessions SNP2346947 NA 5 11837699 0 0 0 6.893883877 10.3389/fpls.2024.1417314 NA NA t3659.T001536 gRDW6.2 4 Root dry weight GWAS (Fast-LMM) 96 accessions SNP3132818 NA 6 26967895 0 0 0 5.78817931 10.3389/fpls.2024.1417314 NA NA t3659.T001537 gRDW2.1 4 Root dry weight GWAS (Fast-LMM) 96 accessions SNP858575 NA 2 14622887 0 0 0 5.198653352 10.3389/fpls.2024.1417314 NA NA t3659.T001538 gRDW3.1 4 Root dry weight GWAS (Fast-LMM) 96 accessions SNP1139794 NA 3 8569196 0 0 0 6.26621147 10.3389/fpls.2024.1417314 NA NA t3659.T001539 gRDW3.2 4 Root dry weight GWAS (Fast-LMM) 96 accessions SNP1451557 NA 3 24942278 0 0 0 5.668542527 10.3389/fpls.2024.1417314 NA NA t3659.T001540 gRDW4.1 4 Root dry weight GWAS (Fast-LMM) 96 accessions SNP2031102 NA 4 17424710 0 0 0 5.25824147 10.3389/fpls.2024.1417314 NA NA t3659.T001541 gRDW5.1 4 Root dry weight GWAS (Fast-LMM) 96 accessions SNP2347582 NA 5 11858580 0 0 0 5.702758132 10.3389/fpls.2024.1417314 NA NA t3659.T001542 gRDW6.1 4 Root dry weight GWAS (Fast-LMM) 96 accessions SNP2839291 NA 6 10573471 0 0 0 5.681830456 10.3389/fpls.2024.1417314 NA NA t3659.T001543 gRDW6.2 4 Root dry weight GWAS (Fast-LMM) 96 accessions SNP3143631 NA 6 27676677 0 0 0 5.94685144 10.3389/fpls.2024.1417314 NA NA t3659.T001544 gRDFW3.2 4 Root dry weight/root fresh weight GWAS (Fast-LMM) 96 accessions SNP1436485 NA 3 24246382 0 0 0 12.27898888 10.3389/fpls.2024.1417314 NA NA t3659.T001545 gRDFW5.3 4 Root dry weight/root fresh weight GWAS (Fast-LMM) 96 accessions SNP2471938 NA 5 19327006 0 0 0 11.44516518 10.3389/fpls.2024.1417314 NA NA t3659.T001546 1 Young fruit resistance to P. capsici QTL-seq ‘Gy14’ × ‘A4-3’ F2 NA 1 5 0 0 0 10.3389/fpls.2023.1281755 NA NA t3659.T001547 1 Young fruit resistance to P. capsici QTL-seq ‘Gy14’ × ‘A4-3’ F2 NA 5 27 0 0 0 10.3389/fpls.2023.1281755 NA NA t3659.T001548 1 Young fruit resistance to P. capsici QTL-seq ‘Gy14’ × ‘A4-3’ F2 NA 5 29 0 0 0 10.3389/fpls.2023.1281755 NA NA t3659.T001549 1 Young fruit resistance to P. capsici QTL-seq ‘Gy14’ × ‘A4-3’ F2 NA 6 27 0 0 0 10.3389/fpls.2023.1281755 NA NA t3659.T001550 1 Young fruit resistance to P. capsici GWAS 388 accessions cucumber core collection S1_21117743 NA 1 21117743 0 0 0 5.15E-13, 1.73E- 10.3389/fpls.2023.1281755 NA NA t3659.T001551 1 Young fruit resistance to P. capsici GWAS 388 accessions cucumber core collection S2_10199046 NA 2 10199046 0 0 0 8.31e-10 10.3389/fpls.2023.1281755 NA NA t3659.T001552 1 Young fruit resistance to P. capsici GWAS 388 accessions cucumber core collection S2_10226744 NA 2 10226744 0 0 0 3.85E-5, 9.76E-1 10.3389/fpls.2023.1281755 NA NA t3659.T001553 1 Young fruit resistance to P. capsici GWAS 388 accessions cucumber core collection S3_18480786 NA 3 18480786 0 0 0 1.06e-08 10.3389/fpls.2023.1281755 NA NA t3659.T001554 1 Young fruit resistance to P. capsici GWAS 388 accessions cucumber core collection S3_37752706 NA 3 37752706 0 0 0 3.37E-11, 4.49E- 10.3389/fpls.2023.1281755 NA NA t3659.T001555 1 Young fruit resistance to P. capsici GWAS 388 accessions cucumber core collection S4_8024257 NA 4 8024257 0 0 0 2.64e-09 10.3389/fpls.2023.1281755 NA NA t3659.T001556 1 Young fruit resistance to P. capsici GWAS 388 accessions cucumber core collection S5_23563699 NA 5 23563699 0 0 0 1.73e-08 10.3389/fpls.2023.1281755 NA NA t3659.T001557 1 Young fruit resistance to P. capsici GWAS 388 accessions cucumber core collection S6_29086459 NA 6 29086459 0 0 0 2.7e-08 10.3389/fpls.2023.1281755 NA NA t3659.T001558 1 Young fruit resistance to P. capsici GWAS 388 accessions cucumber core collection S6_29175300 NA 6 29175300 0 0 0 3.31e-11 10.3389/fpls.2023.1281755 NA NA t3659.T001559 1 Young fruit resistance to P. capsici GWAS 388 accessions cucumber core collection S7_3391182 NA 7 3391182 0 0 0 9.52e-09 10.3389/fpls.2023.1281755 NA NA t3659.T001560 1 Young fruit resistance to P. capsici GWAS 388 accessions cucumber core collection S7_17739386 NA 7 17739386 0 0 0 6.04e-09 10.3389/fpls.2023.1281755 NA NA t3659.T001561 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_322932 NA 1 322932 0 0 0 4.49728441640284 10.3389/fpls.2023.1281755 NA NA t3659.T001562 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_17249415 NA 1 17249415 0 0 0 3.7899481982266e 10.3389/fpls.2023.1281755 NA NA t3659.T001563 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_17249494 NA 1 17249494 0 0 0 1.39770813019365 10.3389/fpls.2023.1281755 NA NA t3659.T001564 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_17249514 NA 1 17249514 0 0 0 1.54027680088998 10.3389/fpls.2023.1281755 NA NA t3659.T001565 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_17258761 NA 1 17258761 0 0 0 1.6859882943821e 10.3389/fpls.2023.1281755 NA NA t3659.T001566 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_18181759 NA 1 18181759 0 0 0 1.91447392380194 10.3389/fpls.2023.1281755 NA NA t3659.T001567 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_18564034 NA 1 18564034 0 0 0 1.55686028579041 10.3389/fpls.2023.1281755 NA NA t3659.T001568 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_18626774 NA 1 18626774 0 0 0 7.06208868718928 10.3389/fpls.2023.1281755 NA NA t3659.T001569 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24651967 NA 1 24651967 0 0 0 9.9787136077931e 10.3389/fpls.2023.1281755 NA NA t3659.T001570 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24748950 NA 1 24748950 0 0 0 5.52220683448112 10.3389/fpls.2023.1281755 NA NA t3659.T001571 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24749054 NA 1 24749054 0 0 0 8.78915060597846 10.3389/fpls.2023.1281755 NA NA t3659.T001572 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24749199 NA 1 24749199 0 0 0 6.57814920226505 10.3389/fpls.2023.1281755 NA NA t3659.T001573 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24749235 NA 1 24749235 0 0 0 5.08662576592796 10.3389/fpls.2023.1281755 NA NA t3659.T001574 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24749256 NA 1 24749256 0 0 0 1.0970822799142e 10.3389/fpls.2023.1281755 NA NA t3659.T001575 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24749269 NA 1 24749269 0 0 0 1.06263621138852 10.3389/fpls.2023.1281755 NA NA t3659.T001576 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24749284 NA 1 24749284 0 0 0 6.22109034843798 10.3389/fpls.2023.1281755 NA NA t3659.T001577 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24749289 NA 1 24749289 0 0 0 6.27078550246981 10.3389/fpls.2023.1281755 NA NA t3659.T001578 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24749319 NA 1 24749319 0 0 0 9.43363709087473 10.3389/fpls.2023.1281755 NA NA t3659.T001579 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24749323 NA 1 24749323 0 0 0 2.62260049151674 10.3389/fpls.2023.1281755 NA NA t3659.T001580 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24749340 NA 1 24749340 0 0 0 8.63395642444052 10.3389/fpls.2023.1281755 NA NA t3659.T001581 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24749351 NA 1 24749351 0 0 0 1.4939085147368e 10.3389/fpls.2023.1281755 NA NA t3659.T001582 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24749413 NA 1 24749413 0 0 0 2.53541315826522 10.3389/fpls.2023.1281755 NA NA t3659.T001583 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24749459 NA 1 24749459 0 0 0 5.25589110189397 10.3389/fpls.2023.1281755 NA NA t3659.T001584 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24749475 NA 1 24749475 0 0 0 8.22842801280175 10.3389/fpls.2023.1281755 NA NA t3659.T001585 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24749477 NA 1 24749477 0 0 0 6.34674443221537 10.3389/fpls.2023.1281755 NA NA t3659.T001586 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24749675 NA 1 24749675 0 0 0 3.30530146819153 10.3389/fpls.2023.1281755 NA NA t3659.T001587 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24749783 NA 1 24749783 0 0 0 2.25181589418035 10.3389/fpls.2023.1281755 NA NA t3659.T001588 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24749959 NA 1 24749959 0 0 0 1.04982393760731 10.3389/fpls.2023.1281755 NA NA t3659.T001589 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24750375 NA 1 24750375 0 0 0 6.41158604052882 10.3389/fpls.2023.1281755 NA NA t3659.T001590 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24750410 NA 1 24750410 0 0 0 1.58656524266966 10.3389/fpls.2023.1281755 NA NA t3659.T001591 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24750442 NA 1 24750442 0 0 0 1.06759307832684 10.3389/fpls.2023.1281755 NA NA t3659.T001592 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24750448 NA 1 24750448 0 0 0 1.30273546053844 10.3389/fpls.2023.1281755 NA NA t3659.T001593 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24750518 NA 1 24750518 0 0 0 2.21850519738681 10.3389/fpls.2023.1281755 NA NA t3659.T001594 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24750558 NA 1 24750558 0 0 0 4.74091721217728 10.3389/fpls.2023.1281755 NA NA t3659.T001595 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24750618 NA 1 24750618 0 0 0 1.13207439111716 10.3389/fpls.2023.1281755 NA NA t3659.T001596 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24750619 NA 1 24750619 0 0 0 1.18769782628115 10.3389/fpls.2023.1281755 NA NA t3659.T001597 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24750636 NA 1 24750636 0 0 0 9.71375554865171 10.3389/fpls.2023.1281755 NA NA t3659.T001598 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24750669 NA 1 24750669 0 0 0 5.00342894826795 10.3389/fpls.2023.1281755 NA NA t3659.T001599 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24750785 NA 1 24750785 0 0 0 5.18090733788046 10.3389/fpls.2023.1281755 NA NA t3659.T001600 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24750851 NA 1 24750851 0 0 0 1.18781022885843 10.3389/fpls.2023.1281755 NA NA t3659.T001601 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24750861 NA 1 24750861 0 0 0 9.73888526476981 10.3389/fpls.2023.1281755 NA NA t3659.T001602 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24750869 NA 1 24750869 0 0 0 6.0968518657504e 10.3389/fpls.2023.1281755 NA NA t3659.T001603 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24750904 NA 1 24750904 0 0 0 4.27532253241698 10.3389/fpls.2023.1281755 NA NA t3659.T001604 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24750908 NA 1 24750908 0 0 0 4.846170505165e- 10.3389/fpls.2023.1281755 NA NA t3659.T001605 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24750920 NA 1 24750920 0 0 0 3.45310449924392 10.3389/fpls.2023.1281755 NA NA t3659.T001606 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24750927 NA 1 24750927 0 0 0 6.21457907867937 10.3389/fpls.2023.1281755 NA NA t3659.T001607 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24750938 NA 1 24750938 0 0 0 1.55200307734395 10.3389/fpls.2023.1281755 NA NA t3659.T001608 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24750941 NA 1 24750941 0 0 0 1.50869633645841 10.3389/fpls.2023.1281755 NA NA t3659.T001609 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24750945 NA 1 24750945 0 0 0 1.53415387785987 10.3389/fpls.2023.1281755 NA NA t3659.T001610 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24750968 NA 1 24750968 0 0 0 6.65085643674849 10.3389/fpls.2023.1281755 NA NA t3659.T001611 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24750995 NA 1 24750995 0 0 0 2.10356387192262 10.3389/fpls.2023.1281755 NA NA t3659.T001612 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24751010 NA 1 24751010 0 0 0 1.70848469009819 10.3389/fpls.2023.1281755 NA NA t3659.T001613 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24751121 NA 1 24751121 0 0 0 2.44818679144838 10.3389/fpls.2023.1281755 NA NA t3659.T001614 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24751131 NA 1 24751131 0 0 0 1.3457097350487e 10.3389/fpls.2023.1281755 NA NA t3659.T001615 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24751142 NA 1 24751142 0 0 0 5.35745686118519 10.3389/fpls.2023.1281755 NA NA t3659.T001616 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24751176 NA 1 24751176 0 0 0 8.8151135912581e 10.3389/fpls.2023.1281755 NA NA t3659.T001617 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24751178 NA 1 24751178 0 0 0 1.06082572777217 10.3389/fpls.2023.1281755 NA NA t3659.T001618 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24751180 NA 1 24751180 0 0 0 1.24624065795812 10.3389/fpls.2023.1281755 NA NA t3659.T001619 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24751208 NA 1 24751208 0 0 0 1.84836129835826 10.3389/fpls.2023.1281755 NA NA t3659.T001620 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24751256 NA 1 24751256 0 0 0 4.37992081564695 10.3389/fpls.2023.1281755 NA NA t3659.T001621 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24751292 NA 1 24751292 0 0 0 2.61951239687114 10.3389/fpls.2023.1281755 NA NA t3659.T001622 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24751299 NA 1 24751299 0 0 0 3.04569400605529 10.3389/fpls.2023.1281755 NA NA t3659.T001623 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24751315 NA 1 24751315 0 0 0 2.99645084813415 10.3389/fpls.2023.1281755 NA NA t3659.T001624 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24751323 NA 1 24751323 0 0 0 1.7394318945612e 10.3389/fpls.2023.1281755 NA NA t3659.T001625 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24751390 NA 1 24751390 0 0 0 1.18056992211364 10.3389/fpls.2023.1281755 NA NA t3659.T001626 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24751400 NA 1 24751400 0 0 0 7.65353016741513 10.3389/fpls.2023.1281755 NA NA t3659.T001627 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24751450 NA 1 24751450 0 0 0 2.2619933868724e 10.3389/fpls.2023.1281755 NA NA t3659.T001628 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24751474 NA 1 24751474 0 0 0 5.81866348019935 10.3389/fpls.2023.1281755 NA NA t3659.T001629 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24751519 NA 1 24751519 0 0 0 2.14535167885686 10.3389/fpls.2023.1281755 NA NA t3659.T001630 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24751574 NA 1 24751574 0 0 0 1.04409253801354 10.3389/fpls.2023.1281755 NA NA t3659.T001631 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24751664 NA 1 24751664 0 0 0 1.88344207099315 10.3389/fpls.2023.1281755 NA NA t3659.T001632 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24751668 NA 1 24751668 0 0 0 2.16443695495462 10.3389/fpls.2023.1281755 NA NA t3659.T001633 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24751697 NA 1 24751697 0 0 0 5.84402054235731 10.3389/fpls.2023.1281755 NA NA t3659.T001634 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24751768 NA 1 24751768 0 0 0 5.73367673677342 10.3389/fpls.2023.1281755 NA NA t3659.T001635 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24751775 NA 1 24751775 0 0 0 4.63111246993292 10.3389/fpls.2023.1281755 NA NA t3659.T001636 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24751807 NA 1 24751807 0 0 0 1.00614561824332 10.3389/fpls.2023.1281755 NA NA t3659.T001637 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24751848 NA 1 24751848 0 0 0 1.08508817164177 10.3389/fpls.2023.1281755 NA NA t3659.T001638 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24751913 NA 1 24751913 0 0 0 2.44731375725816 10.3389/fpls.2023.1281755 NA NA t3659.T001639 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24752015 NA 1 24752015 0 0 0 1.15047085611477 10.3389/fpls.2023.1281755 NA NA t3659.T001640 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24752017 NA 1 24752017 0 0 0 1.23884816856561 10.3389/fpls.2023.1281755 NA NA t3659.T001641 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24752038 NA 1 24752038 0 0 0 3.02674972520789 10.3389/fpls.2023.1281755 NA NA t3659.T001642 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24752047 NA 1 24752047 0 0 0 2.70387706140611 10.3389/fpls.2023.1281755 NA NA t3659.T001643 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24752049 NA 1 24752049 0 0 0 3.20869549165996 10.3389/fpls.2023.1281755 NA NA t3659.T001644 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24752050 NA 1 24752050 0 0 0 2.80802825610878 10.3389/fpls.2023.1281755 NA NA t3659.T001645 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24752123 NA 1 24752123 0 0 0 2.79063842920841 10.3389/fpls.2023.1281755 NA NA t3659.T001646 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24752202 NA 1 24752202 0 0 0 4.10844434023418 10.3389/fpls.2023.1281755 NA NA t3659.T001647 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24752645 NA 1 24752645 0 0 0 8.16050362124264 10.3389/fpls.2023.1281755 NA NA t3659.T001648 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24752724 NA 1 24752724 0 0 0 1.11202500170863 10.3389/fpls.2023.1281755 NA NA t3659.T001649 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24752736 NA 1 24752736 0 0 0 2.1430086582691e 10.3389/fpls.2023.1281755 NA NA t3659.T001650 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24752886 NA 1 24752886 0 0 0 6.33614439642206 10.3389/fpls.2023.1281755 NA NA t3659.T001651 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S1_24752922 NA 1 24752922 0 0 0 7.08943439789131 10.3389/fpls.2023.1281755 NA NA t3659.T001652 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S2_1641449 NA 2 1641449 0 0 0 1.78606251707352 10.3389/fpls.2023.1281755 NA NA t3659.T001653 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S2_1641450 NA 2 1641450 0 0 0 1.6723848869623e 10.3389/fpls.2023.1281755 NA NA t3659.T001654 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S2_1641471 NA 2 1641471 0 0 0 7.44163231962879 10.3389/fpls.2023.1281755 NA NA t3659.T001655 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S2_3626444 NA 2 3626444 0 0 0 1.59749008777165 10.3389/fpls.2023.1281755 NA NA t3659.T001656 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S2_7095855 NA 2 7095855 0 0 0 2.35072591947519 10.3389/fpls.2023.1281755 NA NA t3659.T001657 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S2_7687528 NA 2 7687528 0 0 0 2.91393475614507 10.3389/fpls.2023.1281755 NA NA t3659.T001658 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S2_7732506 NA 2 7732506 0 0 0 1.83726076575535 10.3389/fpls.2023.1281755 NA NA t3659.T001659 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S2_7742628 NA 2 7742628 0 0 0 4.9673671470377e 10.3389/fpls.2023.1281755 NA NA t3659.T001660 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S2_7753262 NA 2 7753262 0 0 0 1.77507427890161 10.3389/fpls.2023.1281755 NA NA t3659.T001661 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S2_7998838 NA 2 7998838 0 0 0 1.10460504125907 10.3389/fpls.2023.1281755 NA NA t3659.T001662 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S2_9762707 NA 2 9762707 0 0 0 1.75773129303508 10.3389/fpls.2023.1281755 NA NA t3659.T001663 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S2_9763635 NA 2 9763635 0 0 0 1.28146778406627 10.3389/fpls.2023.1281755 NA NA t3659.T001664 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S2_10300712 NA 2 10300712 0 0 0 2.29893755069864 10.3389/fpls.2023.1281755 NA NA t3659.T001665 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S2_10303678 NA 2 10303678 0 0 0 1.125260549488e- 10.3389/fpls.2023.1281755 NA NA t3659.T001666 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S2_10357426 NA 2 10357426 0 0 0 1.15976965817542 10.3389/fpls.2023.1281755 NA NA t3659.T001667 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S2_11940045 NA 2 11940045 0 0 0 2.18995971838632 10.3389/fpls.2023.1281755 NA NA t3659.T001668 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S2_12147074 NA 2 12147074 0 0 0 2.7884961967135e 10.3389/fpls.2023.1281755 NA NA t3659.T001669 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S2_12295796 NA 2 12295796 0 0 0 1.53929917992325 10.3389/fpls.2023.1281755 NA NA t3659.T001670 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S3_7941659 NA 3 7941659 0 0 0 9.81076625368091 10.3389/fpls.2023.1281755 NA NA t3659.T001671 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S3_9193157 NA 3 9193157 0 0 0 2.31387031903269 10.3389/fpls.2023.1281755 NA NA t3659.T001672 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S3_28247475 NA 3 28247475 0 0 0 1.35587698224336 10.3389/fpls.2023.1281755 NA NA t3659.T001673 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S3_28247629 NA 3 28247629 0 0 0 4.22082047038063 10.3389/fpls.2023.1281755 NA NA t3659.T001674 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S3_28247772 NA 3 28247772 0 0 0 5.71187723430849 10.3389/fpls.2023.1281755 NA NA t3659.T001675 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S3_28247823 NA 3 28247823 0 0 0 2.5804416867636e 10.3389/fpls.2023.1281755 NA NA t3659.T001676 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S3_28248246 NA 3 28248246 0 0 0 7.24215574922897 10.3389/fpls.2023.1281755 NA NA t3659.T001677 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S3_35485156 NA 3 35485156 0 0 0 8.23189618686369 10.3389/fpls.2023.1281755 NA NA t3659.T001678 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S3_35485214 NA 3 35485214 0 0 0 3.92606688804021 10.3389/fpls.2023.1281755 NA NA t3659.T001679 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S3_35486044 NA 3 35486044 0 0 0 1.53233073580384 10.3389/fpls.2023.1281755 NA NA t3659.T001680 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S3_35486694 NA 3 35486694 0 0 0 4.19767471307792 10.3389/fpls.2023.1281755 NA NA t3659.T001681 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S3_35488077 NA 3 35488077 0 0 0 1.29657936664406 10.3389/fpls.2023.1281755 NA NA t3659.T001682 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S3_35488148 NA 3 35488148 0 0 0 5.79835626852045 10.3389/fpls.2023.1281755 NA NA t3659.T001683 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S3_35488226 NA 3 35488226 0 0 0 8.48158005682103 10.3389/fpls.2023.1281755 NA NA t3659.T001684 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S3_35488468 NA 3 35488468 0 0 0 1.07694560274637 10.3389/fpls.2023.1281755 NA NA t3659.T001685 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S3_35545723 NA 3 35545723 0 0 0 2.25189899964053 10.3389/fpls.2023.1281755 NA NA t3659.T001686 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S3_39287982 NA 3 39287982 0 0 0 1.45844494194421 10.3389/fpls.2023.1281755 NA NA t3659.T001687 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S3_39292099 NA 3 39292099 0 0 0 7.73722737695745 10.3389/fpls.2023.1281755 NA NA t3659.T001688 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S4_335874 NA 4 335874 0 0 0 2.18159749205341 10.3389/fpls.2023.1281755 NA NA t3659.T001689 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S4_2436457 NA 4 2436457 0 0 0 2.06250038048128 10.3389/fpls.2023.1281755 NA NA t3659.T001690 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S4_4546294 NA 4 4546294 0 0 0 7.51653885033076 10.3389/fpls.2023.1281755 NA NA t3659.T001691 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S4_20061875 NA 4 20061875 0 0 0 5.03125024340047 10.3389/fpls.2023.1281755 NA NA t3659.T001692 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S4_20860457 NA 4 20860457 0 0 0 2.313428141375e- 10.3389/fpls.2023.1281755 NA NA t3659.T001693 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S4_20860604 NA 4 20860604 0 0 0 2.06833341327086 10.3389/fpls.2023.1281755 NA NA t3659.T001694 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S4_20861074 NA 4 20861074 0 0 0 1.49451993071714 10.3389/fpls.2023.1281755 NA NA t3659.T001695 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S4_20861094 NA 4 20861094 0 0 0 1.12145822323462 10.3389/fpls.2023.1281755 NA NA t3659.T001696 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S4_20861148 NA 4 20861148 0 0 0 9.407670319129e- 10.3389/fpls.2023.1281755 NA NA t3659.T001697 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S4_20861149 NA 4 20861149 0 0 0 8.9091136352378e 10.3389/fpls.2023.1281755 NA NA t3659.T001698 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S5_17029698 NA 5 17029698 0 0 0 5.71569056128655 10.3389/fpls.2023.1281755 NA NA t3659.T001699 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S5_22208752 NA 5 22208752 0 0 0 7.40557525902952 10.3389/fpls.2023.1281755 NA NA t3659.T001700 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S5_22833469 NA 5 22833469 0 0 0 2.27045784054598 10.3389/fpls.2023.1281755 NA NA t3659.T001701 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S5_23323814 NA 5 23323814 0 0 0 8.39927759256666 10.3389/fpls.2023.1281755 NA NA t3659.T001702 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S5_24839911 NA 5 24839911 0 0 0 1.77682152379698 10.3389/fpls.2023.1281755 NA NA t3659.T001703 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S5_28909866 NA 5 28909866 0 0 0 9.15963378283169 10.3389/fpls.2023.1281755 NA NA t3659.T001704 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S5_28909926 NA 5 28909926 0 0 0 1.90802721968638 10.3389/fpls.2023.1281755 NA NA t3659.T001705 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S5_28910012 NA 5 28910012 0 0 0 6.87561669539399 10.3389/fpls.2023.1281755 NA NA t3659.T001706 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S5_28911057 NA 5 28911057 0 0 0 1.12680804850251 10.3389/fpls.2023.1281755 NA NA t3659.T001707 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S5_28911597 NA 5 28911597 0 0 0 4.50660723657692 10.3389/fpls.2023.1281755 NA NA t3659.T001708 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S5_28911624 NA 5 28911624 0 0 0 1.81377563307323 10.3389/fpls.2023.1281755 NA NA t3659.T001709 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S5_28911675 NA 5 28911675 0 0 0 1.6753953934048e 10.3389/fpls.2023.1281755 NA NA t3659.T001710 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S5_28911735 NA 5 28911735 0 0 0 7.35359756238516 10.3389/fpls.2023.1281755 NA NA t3659.T001711 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S5_28911790 NA 5 28911790 0 0 0 6.1353049873605e 10.3389/fpls.2023.1281755 NA NA t3659.T001712 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S5_28912461 NA 5 28912461 0 0 0 4.77182615779545 10.3389/fpls.2023.1281755 NA NA t3659.T001713 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S5_28912742 NA 5 28912742 0 0 0 6.98407149172416 10.3389/fpls.2023.1281755 NA NA t3659.T001714 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S5_28913070 NA 5 28913070 0 0 0 8.04333374772006 10.3389/fpls.2023.1281755 NA NA t3659.T001715 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S6_1808447 NA 6 1808447 0 0 0 6.67739352124564 10.3389/fpls.2023.1281755 NA NA t3659.T001716 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S6_6641666 NA 6 6641666 0 0 0 1.60924891159577 10.3389/fpls.2023.1281755 NA NA t3659.T001717 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S6_22168224 NA 6 22168224 0 0 0 1.53852729661847 10.3389/fpls.2023.1281755 NA NA t3659.T001718 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S6_22169998 NA 6 22169998 0 0 0 1.87713108755138 10.3389/fpls.2023.1281755 NA NA t3659.T001719 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S6_24591076 NA 6 24591076 0 0 0 2.16804116007756 10.3389/fpls.2023.1281755 NA NA t3659.T001720 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S6_24591089 NA 6 24591089 0 0 0 1.76391130739224 10.3389/fpls.2023.1281755 NA NA t3659.T001721 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S6_26244965 NA 6 26244965 0 0 0 1.30325133016179 10.3389/fpls.2023.1281755 NA NA t3659.T001722 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S6_28994310 NA 6 28994310 0 0 0 8.09156353421295 10.3389/fpls.2023.1281755 NA NA t3659.T001723 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S7_308634 NA 7 308634 0 0 0 2.26023601940738 10.3389/fpls.2023.1281755 NA NA t3659.T001724 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S7_383806 NA 7 383806 0 0 0 4.78190916322185 10.3389/fpls.2023.1281755 NA NA t3659.T001725 1 Young fruit resistance to P. capsici XP-GWAS 29 most resistant, most susceptible accessions S7_17080766 NA 7 17080766 0 0 0 2.13196605964039 10.3389/fpls.2023.1281755 NA NA