t3827.T000001 Foc0 1 fusarium wilt resistance to race 0 QTL analysis C. arietinum (ICCL81001) x C. reticulatum (Cr5-9), C. arietinum (ILC72) x C. reticulatum (Cr5-10) RIL,F6:7 TA59 NA NA 0 0 NA 0 0 4.02 10.1007/s00122-008-0928-7 NA NA t3827.T000002 Foc5 1 fusarium wilt resistance to race 5 QTL analysis C. arietinum (ICCL81001) x C. reticulatum (Cr5-9), C. arietinum (ILC72) x C. reticulatum (Cr5-10) RIL,F6:7 UBC881 621 NA NA 0 0 NA 0 0 2.88 10.1007/s00122-008-0928-7 NA NA t3827.T000003 1 resistance fo FOC-0, resistance to fusarium wilt race 0 QTL analysis CA2139 x JG62 RIL,F6:7 TR59 NA NA 0 0 NA 0 0 8.16 10.1007/s00122-005-1980-1 NA NA t3827.T000004 QTL1 for beta-Carotene Conc. 4 beta-Carotene concentration in seed QTL analysis Hadas x Cr205 F2 TS19 NA NA 0 0 NA 0 0 3.9 10.1007/s00122-005-1930-y NA NA t3827.T000005 QTL1 for Lutein Conc. 4 Lutein concentration in seed QTL analysis Hadas x Cr205 F2 TA25 NA NA 0 0 NA 0 0 2.4 10.1007/s00122-005-1930-y NA NA t3827.T000006 QTL1 for Seed weight 4 seed weight QTL analysis Hadas x Cr205 F2 GA24, STMS11, GA2 NA NA 0 0 NA 0 0 3.8 10.1007/s00122-005-1930-y NA NA t3827.T000007 QTL2 for beta-Carotene Conc. 4 beta-Carotene concentration in seed QTL analysis Hadas x Cr205 F2 TA64, STMS28 NA NA 0 0 NA 0 0 3 10.1007/s00122-005-1930-y NA NA t3827.T000008 QTL2 for Seed weight 4 seed weight QTL analysis Hadas x Cr205 F2 GA11 NA NA 0 0 NA 0 0 3.2 10.1007/s00122-005-1930-y NA NA t3827.T000009 QTL3 for beta-Carotene Conc. 4 beta-Carotene concentration in seed QTL analysis Hadas x Cr205 F2 GA11,TA122 NA NA 0 0 NA 0 0 2.1 10.1007/s00122-005-1930-y NA NA t3827.T000010 QTL3 for Seed weight 4 seed weight QTL analysis Hadas x Cr205 F2 TA120, TR40 NA NA 0 0 NA 0 0 2.4 10.1007/s00122-005-1930-y NA NA t3827.T000011 QTL4 for beta-Carotene Conc. 4 beta-Carotene concentration in seed QTL analysis Hadas x Cr205 F2 TR26 NA NA 0 0 NA 0 0 2.1 10.1007/s00122-005-1930-y NA NA t3827.T000012 qNB1.1 4 NB, number of branches/plant QTL analysis ICC 4958 x ICC 17160 RIL CaTFSNP14 NA NA 0 0 CaTFSNP16 NA 0 0 20.5 3.3 10.1093/dnares/dsu031 NA NA t3827.T000013 qNB1.2 4 NB, number of branches/plant QTL analysis ICC 4958 x ICC 17160 RIL CaTFSNP30 NA NA 0 0 CaTFSNP32 NA 0 0 74.5 9.2 10.1093/dnares/dsu031 NA NA t3827.T000014 qNB2.1 4 NB, number of branches/plant QTL analysis ICC 4958 x ICC 17160 RIL CaSSR51 NA NA 0 0 CaSSR53 NA 0 0 1.8 8.2 10.1093/dnares/dsu031 NA NA t3827.T000015 qNB3.1 4 NB, number of branches/plant QTL analysis ICC 4958 x ICC 17160 RIL CaSSR106 NA NA 0 0 CaTFSNP87 NA 0 0 8.8 4.4 10.1093/dnares/dsu031 NA NA t3827.T000016 qNB6.1 4 NB, number of branches/plant QTL analysis ICC 4958 x ICC 17160 RIL CaTFSNP279 NA NA 0 0 CaTFSNP283 NA 0 0 74.1 9.2 10.1093/dnares/dsu031 NA NA t3827.T000017 qNB6.2 4 NB, number of branches/plant QTL analysis ICC 4958 x ICC 17160 RIL CaSSR381 NA NA 0 0 CaTFSNP298 NA 0 0 120.8 7.1 10.1093/dnares/dsu031 NA NA t3827.T000018 qNB6.3 4 NB, number of branches/plant QTL analysis ICC 4958 x ICC 17160 RIL CaSSR396 NA NA 0 0 CaTFSNP311 NA 0 0 150.8 4.1 10.1093/dnares/dsu031 NA NA t3827.T000019 qNB8.1 4 NB, number of branches/plant QTL analysis ICC 4958 x ICC 17160 RIL CaTFSNP380 NA NA 0 0 CaSSR491 NA 0 0 60.8 3.7 10.1093/dnares/dsu031 NA NA t3827.T000020 qNP1.1 4 NP, number of pods/plant QTL analysis ICC 4958 x ICC 17160 RIL CaTFSNP37 NA NA 0 0 CaTFSNP32 NA 0 0 75.9 8.9 10.1093/dnares/dsu031 NA NA t3827.T000021 qNP1.2 4 NP, number of pods/plant QTL analysis ICC 4958 x ICC 17160 RIL CaSSR43 NA NA 0 0 CaSSR48 NA 0 0 112.6 5.4 10.1093/dnares/dsu031 NA NA t3827.T000022 qNP2.1 4 NP, number of pods/plant QTL analysis ICC 4958 x ICC 17160 RIL CaSSR82 NA NA 0 0 CaSSR85 NA 0 0 53.9 9.7 10.1093/dnares/dsu031 NA NA t3827.T000023 qNP3.1 4 NP, number of pods/plant QTL analysis ICC 4958 x ICC 17160 RIL CaSSR153 NA NA 0 0 CaSSR154 NA 0 0 107.2 5.4 10.1093/dnares/dsu031 NA NA t3827.T000024 qNP4.1 4 NP, number of pods/plant QTL analysis ICC 4958 x ICC 17160 RIL CaTFSNP164 NA NA 0 0 CaSSR194 NA 0 0 35.4 8.8 10.1093/dnares/dsu031 NA NA t3827.T000025 qNP4.2 4 NP, number of pods/plant QTL analysis ICC 4958 x ICC 17160 RIL CaTFSNP248 NA NA 0 0 CaSSR250 NA 0 0 150.6 8.1 10.1093/dnares/dsu031 NA NA t3827.T000026 qNP7.1 4 NP, number of pods/plant QTL analysis ICC 4958 x ICC 17160 RIL CaTFSNP336 NA NA 0 0 CaTFSNP339 NA 0 0 58.4 4.7 10.1093/dnares/dsu031 NA NA t3827.T000027 qNP8.1 4 NP, number of pods/plant QTL analysis ICC 4958 x ICC 17160 RIL CaSSR466 NA NA 0 0 CaTFSNP359 NA 0 0 8.9 4.4 10.1093/dnares/dsu031 NA NA t3827.T000028 qPH6.1 4 PH, plant hairiness QTL analysis ICC 4958 x ICC 17160 RIL CaSSR381 NA NA 0 0 CaSSR384 NA 0 0 120.8 8.5 10.1093/dnares/dsu031 NA NA t3827.T000029 qPH7.1 4 PH, plant hairiness QTL analysis ICC 4958 x ICC 17160 RIL CaTFSNP344 NA NA 0 0 CaSSR462 NA 0 0 101.4 7.1 10.1093/dnares/dsu031 NA NA t3827.T000030 qSW1.1 4 SW, 100-seed weight QTL analysis ICC 4958 x ICC 17160 RIL CaTFSNP4 NA NA 0 0 CaTFSNP6 NA 0 0 9.8 4.2 10.1093/dnares/dsu031 NA NA t3827.T000031 qSW1.2 4 SW, 100-seed weight QTL analysis ICC 4958 x ICC 17160 RIL CaSSR27 NA NA 0 0 CaSSR30 NA 0 0 37.5 11.2 10.1093/dnares/dsu031 NA NA t3827.T000032 qSW1.3 4 SW, 100-seed weight QTL analysis ICC 4958 x ICC 17160 RIL CaTFSNP38 NA NA 0 0 CaSSR48 NA 0 0 115.8 5.1 10.1093/dnares/dsu031 NA NA t3827.T000033 qSW2.1 4 SW, 100-seed weight QTL analysis ICC 4958 x ICC 17160 RIL CaSSR50 NA NA 0 0 CaSSR53 NA 0 0 0 3.8 10.1093/dnares/dsu031 NA NA t3827.T000034 qSW2.1 4 SW, 100-seed weight QTL analysis ICC 4958 x ICC 17160 RIL CaSSR50 NA NA 0 0 CaSSR53 NA 0 0 0 4.7 10.1093/dnares/dsu031 NA NA t3827.T000035 qSW3.1 4 SW, 100-seed weight QTL analysis ICC 4958 x ICC 17160 RIL CaTFSNP128 NA NA 0 0 CaSSR154 NA 0 0 106.2 5.2 10.1093/dnares/dsu031 NA NA t3827.T000036 qSW4.1 4 SW, 100-seed weight QTL analysis ICC 4958 x ICC 17160 RIL CaTFSNP164 NA NA 0 0 CaSSR203 NA 0 0 35.4 9.8 10.1093/dnares/dsu031 NA NA t3827.T000037 qSW4.2 4 SW, 100-seed weight QTL analysis ICC 4958 x ICC 17160 RIL CaTFSNP248 NA NA 0 0 CaTFSNP203 NA 0 0 150.6 16.2 10.1093/dnares/dsu031 NA NA t3827.T000038 qSW5.1 4 SW, 100-seed weight QTL analysis ICC 4958 x ICC 17160 RIL CaTFSNP229 NA NA 0 0 CaTFSNP232 NA 0 0 72.1 4.6 10.1093/dnares/dsu031 NA NA t3827.T000039 qSW6.1 4 SW, 100-seed weight QTL analysis ICC 4958 x ICC 17160 RIL CaTFSNP281 NA NA 0 0 CaTFSNP283 NA 0 0 76 4.5 10.1093/dnares/dsu031 NA NA t3827.T000040 4 100-seed weight QTL analysis ICC 4958 x ICC 17163 RIL Ca-CNMS98 NA NA 0 0 Ca-CNMS100 NA 0 0 39.3 10.1093/jxb/eru478 NA NA t3827.T000041 4 100-seed weight QTL analysis ICC 4958 x ICC 17163 RIL Ca-CNMS544 NA NA 0 0 Ca-CNMS547 NA 0 0 24.3 10.1093/jxb/eru478 NA NA t3827.T000042 QTL1 1 ABR_IDS-F, initial disease score (IDS) for the initial disease reaction against ascochyta blight (A. rabiei) in field QTL analysis ICC1 2004 x Lasseter F2 STMS28 NA NA 0 0 TS12b NA 0 0 10.1007/s00122-003-1371-4 NA NA t3827.T000043 QTL2 1 ABR_AUDPC-GR, area under the disease progress curve (AUDPC) for the progress of ascochyta blight over time in a controlled environment QTL analysis ICC1 2004 x Lasseter F2 TA3a NA NA 0 0 TS45 NA 0 0 10.1007/s00122-003-1371-4 NA NA t3827.T000044 QTL3 1 ABR_IDS-GR, initial disease score (IDS) for the initial disease reaction against ascochyta blight (A. rabiei) in a controlled environment QTL analysis ICC1 2004 x Lasseter F2 TS45 NA NA 0 0 TA3b NA 0 0 10.1007/s00122-003-1371-4 NA NA t3827.T000045 QTL4 1 ABR_AUDPC-F, area under the disease progress curve (AUDPC) for the progress of ascochyta blight over time in field QTL analysis ICC1 2004 x Lasseter F2 PTOFENb_212 NA NA 0 0 TA130 NA 0 0 10.1007/s00122-003-1371-4 NA NA t3827.T000046 QTL5 1 ABR_IDS-F, initial disease score (IDS) for the initial disease reaction against ascochyta blight (A. rabiei) in field QTL analysis ICC1 2004 x Lasseter F2 TA130 NA NA 0 0 TA146 NA 0 0 10.1007/s00122-003-1371-4 NA NA t3827.T000047 QTL6 1 ABR_IDS-GR, initial disease score (IDS) for the initial disease reaction against ascochyta blight (A. rabiei) in a controlled environment QTL analysis ICC1 2004 x Lasseter F2 TA146 NA NA 0 0 ClRRinv904 NA 0 0 10.1007/s00122-003-1371-4 NA NA t3827.T000048 QR3100sdw03 4 100SDW, 100-seed weight (g) QTL analysis ICCRIL03 RIL NCPGR127 NA NA 0 0 NCPGR21 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000049 QR3100sdw04 4 100SDW, 100-seed weight (g) QTL analysis ICCRIL03 RIL NCPGR184 NA NA 0 0 ICCM0009b NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000050 QR3bm03 3 BM, Biomass (g) QTL analysis ICCRIL03 RIL NCPGR127 NA NA 0 0 NCPGR21 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000051 QR3bm05 3 BM, Biomass (g) QTL analysis ICCRIL03 RIL NCPGR164 NA NA 0 0 CaM1918 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000052 QR3df01 4 DF, Days to 50% flowering QTL analysis ICCRIL03 RIL NCPGR164 NA NA 0 0 CaM1918 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000053 QR3dm01 4 DM, Days to maturity QTL analysis ICCRIL03 RIL NCPGR164 NA NA 0 0 CaM1918 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000054 QR3dm03 4 DM, Days to maturity QTL analysis ICCRIL03 RIL TA106 NA NA 0 0 CaM0399 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000055 QR3dm04 4 DM, Days to maturity QTL analysis ICCRIL03 RIL NCPGR127 NA NA 0 0 TAA170 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000056 QR3dti03 1 DTI, Drought tolerance index QTL analysis ICCRIL03 RIL cpPb-679915 NA NA 0 0 CaM0046 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000057 QR3hi03 3 HI, Harvest index (%) QTL analysis ICCRIL03 RIL NCPGR184 NA NA 0 0 ICCM0009b NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000058 QR3hi06 3 HI, Harvest index (%) QTL analysis ICCRIL03 RIL cpPb-679915 NA NA 0 0 CaM0393 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000059 QR3hi10 3 HI, Harvest index (%) QTL analysis ICCRIL03 RIL TAA170 NA NA 0 0 NCPGR21 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000060 QR3pht01 4 PHT, Plant height (cm) QTL analysis ICCRIL03 RIL CaM1760 NA NA 0 0 CaM0399 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000061 QR3pht02 4 PHT, Plant height (cm) QTL analysis ICCRIL03 RIL TA34 NA NA 0 0 NCPGR49 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000062 QR3pht03 4 PHT, Plant height (cm) QTL analysis ICCRIL03 RIL NCPGR127 NA NA 0 0 NCPGR21 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000063 QR3pht06 4 PHT, Plant height (cm) QTL analysis ICCRIL03 RIL NCPGR164 NA NA 0 0 CaM2187 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000064 QR3pod01 3 POD, Pods/plant QTL analysis ICCRIL03 RIL NCPGR127 NA NA 0 0 NCPGR21 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000065 QR3rld01 4 RLD, Root length density QTL analysis ICCRIL03 RIL NCPGR127 NA NA 0 0 NCPGR21 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000066 QR3rsa02 4 RSA, Root surface area (cm2) QTL analysis ICCRIL03 RIL TA106 NA NA 0 0 H1I16 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000067 QR3rtr01 6 RTR, Root dry weight/total plant dry weight ratio (%) QTL analysis ICCRIL03 RIL TAA170 NA NA 0 0 NCPGR21 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000068 QR3sdw01 3 SDW, Shoot dry weight (g) QTL analysis ICCRIL03 RIL TAA170 NA NA 0 0 NCPGR21 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000069 QR3spd01 3 SPD, Seeds/pod QTL analysis ICCRIL03 RIL TAA170 NA NA 0 0 NCPGR21 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000070 QR3yld03 3 YLD, Yield (g) QTL analysis ICCRIL03 RIL NCPGR136 NA NA 0 0 CaM0046 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000071 QR3yld04 3 YLD, Yield (g) QTL analysis ICCRIL03 RIL TAA170 NA NA 0 0 NCPGR21 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000072 QR4100sdw02 4 100SDW, 100-seed weight (g) QTL analysis ICCRIL04 RIL CaM2093 NA NA 0 0 ICCM0249 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000073 QR4df01 4 DF, Days to 50 % flowering QTL analysis ICCRIL04 RIL CaM1753 NA NA 0 0 cpPb-677529 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000074 QR4df02 4 DF, Days to 50 % flowering QTL analysis ICCRIL04 RIL CaM1257 NA NA 0 0 ICCeM0015 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000075 QR4df03 4 DF, Days to 50 % flowering QTL analysis ICCRIL04 RIL CaM0772 NA NA 0 0 TS45 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000076 QR4df05 4 DF, Days to 50 % flowering QTL analysis ICCRIL04 RIL NCPGR136 NA NA 0 0 TR43 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000077 QR4df06 4 DF, Days to 50 % flowering QTL analysis ICCRIL04 RIL TA103II NA NA 0 0 TA122 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000078 QR4dm03 4 DM, Days to maturity QTL analysis ICCRIL04 RIL CaM1257 NA NA 0 0 NCPGR200 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000079 QR4dm04 4 DM, Days to maturity QTL analysis ICCRIL04 RIL GA6 NA NA 0 0 TA118 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000080 QR4dm05 4 DM, Days to maturity QTL analysis ICCRIL04 RIL TA103II NA NA 0 0 TA113 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000081 QR4dm07 4 DM, Days to maturity QTL analysis ICCRIL04 RIL CaM2029 NA NA 0 0 TA11 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000082 QR4dti02 1 DTI, Drought tolerance index QTL analysis ICCRIL04 RIL NCPGR136 NA NA 0 0 TA203 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000083 QR4dti03 1 DTI, Drought tolerance index QTL analysis ICCRIL04 RIL TA103II NA NA 0 0 TA122 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000084 QR4hi01 3 HI, Harvest index (%) QTL analysis ICCRIL04 RIL CaM0772 NA NA 0 0 NCPGR138 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000085 QR4hi02 3 HI, Harvest index (%) QTL analysis ICCRIL04 RIL CaM0317 NA NA 0 0 ICCeM0015 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000086 QR4pht02 4 PHT, Plant height (cm) QTL analysis ICCRIL04 RIL CaM0772 NA NA 0 0 TS45 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000087 QR4pht04 4 PHT, Plant height (cm) QTL analysis ICCRIL04 RIL CaM2029 NA NA 0 0 TA11 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000088 QR4pod02 3 POD, Pods/plant QTL analysis ICCRIL04 RIL CaM0772 NA NA 0 0 TS45 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000089 QR4pwd01 4 PWD, Plant width (cm) QTL analysis ICCRIL04 RIL CaM0772 NA NA 0 0 TA118 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000090 QR4yld02 3 YLD, Yield (g) QTL analysis ICCRIL04 RIL TA59 NA NA 0 0 TA200 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000091 QR4yld03 3 YLD, Yield (g) QTL analysis ICCRIL04 RIL cpPb-677529 NA NA 0 0 CaM1024 NA 0 0 10.1007/s00122-013-2230-6 NA NA t3827.T000092 QTL2 1 resistance to ascochyta blight (AB) QTL analysis ICCV 96029 x Amit F2 TA64 NA NA 0 0 NA 0 0 3.16 10.1007/s00122-009-1086-2 NA NA t3827.T000093 QTL3 1 resistance to ascochyta blight (AB) QTL analysis ICCV 96029 x CDC Corinne F2 TA132 NA NA 0 0 NA 0 0 5.53 10.1007/s00122-009-1086-2 NA NA t3827.T000094 QTL5 1 resistance to ascochyta blight (AB) QTL analysis ICCV 96029 x CDC Corinne F2 TS45 NA NA 0 0 NA 0 0 2.92 10.1007/s00122-009-1086-2 NA NA t3827.T000095 QTL2 1 resistance to ascochyta blight (AB) QTL analysis ICCV 96029 x CDC Frontier F2 TA64 NA NA 0 0 NA 0 0 4.27 10.1007/s00122-009-1086-2 NA NA t3827.T000096 QTL3 1 resistance to ascochyta blight (AB) QTL analysis ICCV 96029 x CDC Frontier F2 TS54 NA NA 0 0 NA 0 0 9.58 10.1007/s00122-009-1086-2 NA NA t3827.T000097 QTL4 1 resistance to ascochyta blight (AB) QTL analysis ICCV 96029 x CDC Frontier F2 TA176 NA NA 0 0 NA 0 0 3.88 10.1007/s00122-009-1086-2 NA NA t3827.T000098 QTL1 1 resistance to ascochyta blight (AB) QTL analysis ICCV 96029 x CDC Luna F2 TR19 NA NA 0 0 NA 0 0 14.32 10.1007/s00122-009-1086-2 NA NA t3827.T000099 QTL3 1 resistance to ascochyta blight (AB) QTL analysis ICCV 96029 x CDC Luna F2 TS54 NA NA 0 0 NA 0 0 4.09 10.1007/s00122-009-1086-2 NA NA t3827.T000100 4 100-seed weight/size QTL analysis ICCX-810800 x ICC20268 FALSE TFGMS18 NA NA 0 0 TFFDMS20-TYPE-I NA 0 0 73.5 3.7 10.1093/dnares/dst015 NA NA t3827.T000101 4 Seed number per plant, NAC (No apical meristemarabidopsis transcription activation factorcup shaped cotyledon) GWAS ICCX-810800 x ICC20268 F3 TFGMS3 (microsatellite marker) NA NA 0 0 NA 0 0 73.9 1.31 10.1093/dnares/dst015 NA NA t3827.T000102 ar2a 1 ar, resistance to A. rabiei pathotype II, close to the pathotype I resistance locus ar1 QTL analysis ILC 3279 x ILC 1272 RIL ar1 NA NA 0 0 NA 0 0 approx. 8 10.1007/s00122-002-1168-x NA NA t3827.T000103 ar2b 1 ar, resistance to A. rabiei pathotype II QTL analysis ILC 3279 x ILC 1272 RIL TA72 NA NA 0 0 NA 0 0 approx. 4 10.1007/s00122-002-1168-x NA NA t3827.T000104 QTL_AR1 1 resistance to ascochyta blight QTL analysis ILC3279 x WR315 RIL,F6:7 UBC881_465 NA NA 0 0 OPR11_870 NA 0 0 5.6 10.1007/s00122-005-0126-9 NA NA t3827.T000105 QTL_AR2 1 resistance to ascochyta blight QTL analysis ILC3279 x WR315 RIL,F6:7 TA146 NA NA 0 0 TA72 NA 0 0 5.13 10.1007/s00122-005-0126-9 NA NA t3827.T000106 3 Breda-10, Harvest index QTL analysis ILC588 x ILC3279 RIL,F8 TA-203 NA NA 0 0 NA 0 0 3.65 10.1007/s00122-012-2034-0 NA NA t3827.T000107 4 PLHT_Breda-10, Plant height QTL analysis ILC588 x ILC3279 RIL,F8 TA-96 NA NA 0 0 NA 0 0 3.26 10.1007/s00122-012-2034-0 NA NA t3827.T000108 4 DFLR_Terbol-11, Days to flowering QTL analysis ILC588 x ILC3279 RIL,F8 H6C-07 NA NA 0 0 NA 0 0 8.64 10.1007/s00122-012-2034-0 NA NA t3827.T000109 4 100sw_Terbol-11, 100 seed weight QTL analysis ILC588 x ILC3279 RIL,F8 H1H-15 NA NA 0 0 NA 0 0 3.88 10.1007/s00122-012-2034-0 NA NA t3827.T000110 4 100sw_Breda10, 100 seed weight QTL analysis ILC588 x ILC3279 RIL,F8 TAA-58 NA NA 0 0 NA 0 0 2.24 10.1007/s00122-012-2034-0 NA NA t3827.T000111 4 100sw_Terbol-09, 100 seed weight QTL analysis ILC588 x ILC3279 RIL,F8 SCEA19 NA NA 0 0 NA 0 0 2.29 10.1007/s00122-012-2034-0 NA NA t3827.T000112 4 MAT_TH-Dr10, Days to maturity QTL analysis ILC588 x ILC3279 RIL,F8 TS-19 NA NA 0 0 NA 0 0 3.66 10.1007/s00122-012-2034-0 NA NA t3827.T000113 Qncl.Sw1 4 Sw, seed weight QTL analysis JG62 x Vijay RIL,F8:9 TR56 NA NA 0 0 NA 0 0 2.56 10.1007/s00122-007-0556-7 NA NA t3827.T000114 Qncl.Sw2 4 Sw, seed weight QTL analysis JG62 x Vijay RIL,F8:9 UBC238y NA NA 0 0 NA 0 0 3.19 10.1007/s00122-007-0556-7 NA NA t3827.T000115 Qncl.Sw3 4 Sw, seed weight QTL analysis JG62 x Vijay RIL,F8:9 TA116x NA NA 0 0 NA 0 0 2 10.1007/s00122-007-0556-7 NA NA t3827.T000116 Qncl.Sw4 4 Sw, seed weight QTL analysis JG62 x Vijay RIL,F8:9 STMS13 NA NA 0 0 NA 0 0 2.07 10.1007/s00122-007-0556-7 NA NA t3827.T000117 Qncl.Sw5 4 Sw, seed weight QTL analysis JG62 x Vijay RIL,F8:9 UBC17 NA NA 0 0 NA 0 0 2.87 10.1007/s00122-007-0556-7 NA NA t3827.T000118 Qncl.Sw6 4 Sw, seed weight QTL analysis JG62 x Vijay RIL,F8:9 TA53 NA NA 0 0 NA 0 0 2.65 10.1007/s00122-007-0556-7 NA NA t3827.T000119 Qncl.Sw7 4 Sw, seed weight QTL analysis JG62 x Vijay RIL,F8:9 TR7s NA NA 0 0 NA 0 0 3.35 10.1007/s00122-007-0556-7 NA NA t3827.T000120 Qncl.Sw8 4 Sw, seed weight QTL analysis JG62 x Vijay RIL,F8:9 STMS2 NA NA 0 0 NA 0 0 2.87 10.1007/s00122-007-0556-7 NA NA t3827.T000121 S1 1 seedling resistance, seedling resistance to ascochyta blight caused by A. rabiei QTL analysis Lasseter x PI 527930 (C. echinospermum) F2 UBC836b730 NA NA 0 0 UBC77c630 NA 0 0 2.5 10.1007/s00122-003-1297-x NA NA t3827.T000122 S2 1 seedling resistance, seedling resistance to ascochyta blight caused by A. rabiei QTL analysis Lasseter x PI 527930 (C. echinospermum) F2 XLRRb280 NA NA 0 0 NA 0 0 2.6 10.1007/s00122-003-1297-x NA NA t3827.T000123 4 100-seed weight GWAS NULL NULL Ca-CNMS100 (microsatellite marke NA NA 0 0 NA 0 0 3.921 10.1093/jxb/eru478 NA NA t3827.T000124 4 seed weight GWAS NULL NULL Ca-CNMS545 (microsatellite marke NA NA 0 0 NA 0 0 1.509 10.1093/jxb/eru478 NA NA t3827.T000125 4 DTF, days to flowering QTL analysis NULL RIL,F6 NA NA 0 0 NA 0 0 15.3 9 10.1007/s00122-006-0390-3 NA NA t3827.T000126 4 DTF, days to flowering QTL analysis NULL RIL,F6 NA NA 0 0 NA 0 0 48.2 4.4 10.1007/s00122-006-0390-3 NA NA t3827.T000127 1 RDR, resistance to Didymella rabiei QTL analysis NULL RIL,F6 NA NA 0 0 NA 0 0 3.6 6.9 10.1007/s00122-006-0390-3 NA NA t3827.T000128 4 DTF, days to flowering QTL analysis NULL RIL,F6 NA NA 0 0 NA 0 0 2.3 3.9 10.1007/s00122-006-0390-3 NA NA t3827.T000129 qSW4.2 4 SW, 100-seed weight GWAS NULL NULL CaSNP194 NA NA 0 0 NA 0 0 3 10.1093/dnares/dsu031 NA NA t3827.T000130 1 resistance to A. rabiei pathotype I (isolate Ar21d) QTL analysis PI 359075(1) x FLIP84-92C(2) RIL GA20 NA NA 0 0 GA16 NA 0 0 2.66 10.1007/s00122-004-1693-x NA NA t3827.T000131 1 resistance to A. rabiei pathotype I (isolate Ar19) QTL analysis PI 359075(1) x FLIP84-92C(2) RIL GA20 NA NA 0 0 GA16 NA 0 0 3.08 10.1007/s00122-004-1693-x NA NA t3827.T000132 1 resistance to A. rabiei pathotype I (isolate Ar21d) QTL analysis PI 359075(1) x FLIP84-92C(2) RIL TA37 NA NA 0 0 TA200 NA 0 0 3.69 10.1007/s00122-004-1693-x NA NA t3827.T000133 1 resistance to Ascochyta blight in the field QTL analysis PI 359075(1) x FLIP84-92C(2) RIL GA24 NA NA 0 0 GAA47 NA 0 0 4.17 10.1007/s00122-004-1693-x NA NA t3827.T000134 1 Ascochyta blight resistance Interval mapping ICCV 96029 × CDC Frontier RIL CAV1SC21.1P1495114 NA 0 0 0 0 19.8 3.3 10.1139/gen-2016-0036 NA NA t3827.T000135 1 Ascochyta blight resistance Interval mapping ICCV 96029 × CDC Frontier RIL scaffold405p948196 NA 0 0 0 0 34 4.8 10.1139/gen-2016-0036 NA NA t3827.T000136 1 Ascochyta blight resistance Interval mapping ICCV 96029 × CDC Frontier RIL CAV1sc445.1p92883 NA 0 0 0 0 26.9 5.5 10.1139/gen-2016-0036 NA NA t3827.T000137 1 Ascochyta blight resistance Interval mapping ICCV 96029 × CDC Frontier RIL CAV1SC102.1P548827 NA 0 0 0 0 45 3.2 10.1139/gen-2016-0036 NA NA t3827.T000138 1 Ascochyta blight resistance Interval mapping ICCV 96029 × CDC Frontier RIL scaffold1567p981540 NA 0 0 0 0 1.6 5.4 10.1139/gen-2016-0036 NA NA t3827.T000139 1 Ascochyta blight resistance Interval mapping ICCV 96029 × CDC Frontier RIL scaffold21p63604 NA 0 0 0 0 53.8 3.2 10.1139/gen-2016-0036 NA NA t3827.T000140 1 Ascochyta blight resistance Interval mapping ICCV 96029 × CDC Frontier RIL CAV1SC679.1P39451 NA 0 0 0 0 72 3.6 10.1139/gen-2016-0036 NA NA t3827.T000141 1 Ascochyta blight resistance Interval mapping ICCV 96029 × CDC Frontier RIL scaffold905p1129574 NA 0 0 0 0 41.4 3.9 10.1139/gen-2016-0036 NA NA t3827.T000142 1 Ascochyta blight resistance Interval mapping ICCV 96029 × CDC Frontier RIL CAV1SC548.1P43520 NA 0 0 0 0 8.6 4.6 10.1139/gen-2016-0036 NA NA t3827.T000143 1 Drought adaptation Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T000144 1 Drought susceptibility index Interval mapping ICC 4958 × ICC 1882 RIL ICCM0199c NA 0 0 CaM1417 0 0 6.2819999999999965 3.652552 10.1007/s00438-014-0932-3 NA NA t3827.T000145 1 Drought susceptibility indices ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 4.312 10.1038/srep15296 NA NA t3827.T000146 1 Drought tolerance index Interval mapping ICC 4958 × ICC 1882 RIL H2A08 NA 0 0 Ca1_6540035 0 0 16.285000000000004 3.168295 10.1007/s00438-014-0932-3 NA NA t3827.T000147 1 Drought tolerance index Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12558541 NA 0 0 Ca4_11276225 0 0 1.8120000000000118 6.542888 10.1007/s00438-014-0932-3 NA NA t3827.T000148 1 Drought tolerance index Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 CISR80 0 0 15.125000000000007 5.995657 10.1007/s00438-014-0932-3 NA NA t3827.T000149 1 Drought tolerance indices ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_1_22810338 NA 0 0 bin_1_22349608 0 0 3.6936 10.1038/srep15296 NA NA t3827.T000150 1 Drought tolerance indices ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_7_32532047 NA 0 0 bin_7_32710042 0 0 3.2579 10.1038/srep15296 NA NA t3827.T000151 1 Drought tolerance indices ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_7_4171826 NA 0 0 bin_7_4156233 0 0 3.9169 10.1038/srep15296 NA NA t3827.T000152 1 Drought tolerance indices ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 3.404 10.1038/srep15296 NA NA t3827.T000153 MTA_on_LG2 1 MSI (membrane stability index) GLM 71 desi chickpea genotypes accession NCPGR206 NA 0 0 0 0 0.00252 10.1007/s13205-017-1057-2 NA NA t3827.T000154 MTA_on_LG2 1 MSI (membrane stability index) GLM 71 desi chickpea genotypes accession NCPGR206 NA 0 0 0 0 0.00866 10.1007/s13205-017-1057-2 NA NA t3827.T000155 MTA_on_LG2 1 MSI (membrane stability index) GLM 71 desi chickpea genotypes accession NCPGR206 NA 0 0 0 0 0.0423 10.1007/s13205-017-1057-2 NA NA t3827.T000156 MTA_on_LG2 1 MSI (membrane stability index) MLM 71 desi chickpea genotypes accession NCPGR206 NA 0 0 0 0 0.01758 10.1007/s13205-017-1057-2 NA NA t3827.T000157 MTA_on_LG2 1 MSI (membrane stability index) MLM 71 desi chickpea genotypes accession NCPGR206 NA 0 0 0 0 0.02589 10.1007/s13205-017-1057-2 NA NA t3827.T000158 MTA_on_LG2 1 MSI (membrane stability index) MLM 71 desi chickpea genotypes accession NCPGR206 NA 0 0 0 0 0.04754 10.1007/s13205-017-1057-2 NA NA t3827.T000159 MTA_on_LG5 1 MSI (membrane stability index) GLM 71 desi chickpea genotypes accession NCPGR267 NA 0 0 0 0 0.0004 10.1007/s13205-017-1057-2 NA NA t3827.T000160 MTA_on_LG5 1 MSI (membrane stability index) GLM 71 desi chickpea genotypes accession NCPGR267 NA 0 0 0 0 0.00139 10.1007/s13205-017-1057-2 NA NA t3827.T000161 MTA_on_LG5 1 MSI (membrane stability index) MLM 71 desi chickpea genotypes accession NCPGR267 NA 0 0 0 0 0.00112 10.1007/s13205-017-1057-2 NA NA t3827.T000162 MTA_on_LG5 1 MSI (membrane stability index) MLM 71 desi chickpea genotypes accession NCPGR267 NA 0 0 0 0 0.00132 10.1007/s13205-017-1057-2 NA NA t3827.T000163 MTA_on_LG5 1 MSI (membrane stability index) MLM 71 desi chickpea genotypes accession NCPGR267 NA 0 0 0 0 0.00268 10.1007/s13205-017-1057-2 NA NA t3827.T000164 MTA_on_LG6 1 MSI (membrane stability index) GLM 71 desi chickpea genotypes accession NCPGR156 NA 0 0 0 0 0.01094 10.1007/s13205-017-1057-2 NA NA t3827.T000165 MTA_on_LG6 1 MSI (membrane stability index) GLM 71 desi chickpea genotypes accession H2L102 NA 0 0 0 0 0.01282 10.1007/s13205-017-1057-2 NA NA t3827.T000166 MTA_on_LG6 1 MSI (membrane stability index) GLM 71 desi chickpea genotypes accession TA64 NA 0 0 0 0 0.02062 10.1007/s13205-017-1057-2 NA NA t3827.T000167 MTA_on_LG6 1 MSI (membrane stability index) GLM 71 desi chickpea genotypes accession H2L102 NA 0 0 0 0 0.02105 10.1007/s13205-017-1057-2 NA NA t3827.T000168 MTA_on_LG6 1 MSI (membrane stability index) GLM 71 desi chickpea genotypes accession NCPGR238 NA 0 0 0 0 0.03756 10.1007/s13205-017-1057-2 NA NA t3827.T000169 MTA_on_LG6 1 MSI (membrane stability index) GLM 71 desi chickpea genotypes accession H2L102 NA 0 0 0 0 0.04448 10.1007/s13205-017-1057-2 NA NA t3827.T000170 MTA_on_LG6 1 MSI (membrane stability index) MLM 71 desi chickpea genotypes accession H2L102 NA 0 0 0 0 0.01711 10.1007/s13205-017-1057-2 NA NA t3827.T000171 MTA_on_LG6 1 MSI (membrane stability index) MLM 71 desi chickpea genotypes accession H2L102 NA 0 0 0 0 0.02129 10.1007/s13205-017-1057-2 NA NA t3827.T000172 MTA_on_LG6 1 MSI (membrane stability index) MLM 71 desi chickpea genotypes accession H2L102 NA 0 0 0 0 0.02399 10.1007/s13205-017-1057-2 NA NA t3827.T000173 MTA_on_LG6 1 MSI (membrane stability index) MLM 71 desi chickpea genotypes accession NCPGR156 NA 0 0 0 0 0.0365 10.1007/s13205-017-1057-2 NA NA t3827.T000174 MTA_on_LG7 1 MSI (membrane stability index) MLM 71 desi chickpea genotypes accession TS53 NA 0 0 0 0 0.03182 10.1007/s13205-017-1057-2 NA NA t3827.T000175 EMB8-like 1 salinity tolerance multi-trait genome-wide associat population set of 186 different chickpea genotypes collected from 28 provinces in 13 countries germplasm panel (drought subset) rs5825813 NA Ca4 10618070 0 0 0 0.003 10.1371/journal.pone.0260709 NA NA t3827.T000176 EMB8-like 1 salinity tolerance multi-trait genome-wide associat population set of 186 different chickpea genotypes collected from 28 provinces in 13 countries germplasm panel (drought subset) rs5825813 NA Ca4 10618070 0 0 0 0.003 10.1371/journal.pone.0260709 NA NA t3827.T000177 RPLP0 1 salinity tolerance multi-trait genome-wide associat population set of 186 different chickpea genotypes collected from 28 provinces in 13 countries germplasm panel (drought subset) rs5825939 NA Ca2 30537619 0 0 0 0.003 10.1371/journal.pone.0260709 NA NA t3827.T000178 MTA_on_LG1 1 SCMR (SPAD chlorophyll meter reading) GLM 71 desi chickpea genotypes accession CESSR172 NA 0 0 0 0 0.00422 10.1007/s13205-017-1057-2 NA NA t3827.T000179 MTA_on_LG1 1 SCMR (SPAD chlorophyll meter reading) GLM 71 desi chickpea genotypes accession TA113 NA 0 0 0 0 0.00697 10.1007/s13205-017-1057-2 NA NA t3827.T000180 MTA_on_LG1 1 SCMR (SPAD chlorophyll meter reading) GLM 71 desi chickpea genotypes accession TA113 NA 0 0 0 0 0.03007 10.1007/s13205-017-1057-2 NA NA t3827.T000181 MTA_on_LG1 1 SCMR (SPAD chlorophyll meter reading) GLM 71 desi chickpea genotypes accession NCPGR199 NA 0 0 0 0 0.03453 10.1007/s13205-017-1057-2 NA NA t3827.T000182 MTA_on_LG1 1 SCMR (SPAD chlorophyll meter reading) MLM 71 desi chickpea genotypes accession CESSR172 NA 0 0 0 0 0.04478 10.1007/s13205-017-1057-2 NA NA t3827.T000183 MTA_on_LG2 1 SCMR (SPAD chlorophyll meter reading) GLM 71 desi chickpea genotypes accession TR31 NA 0 0 0 0 0.04308 10.1007/s13205-017-1057-2 NA NA t3827.T000184 MTA_on_LG2 1 SCMR (SPAD chlorophyll meter reading) MLM 71 desi chickpea genotypes accession TR31 NA 0 0 0 0 0.02917 10.1007/s13205-017-1057-2 NA NA t3827.T000185 MTA_on_LG2 1 SCMR (SPAD chlorophyll meter reading) MLM 71 desi chickpea genotypes accession TR31 NA 0 0 0 0 0.03894 10.1007/s13205-017-1057-2 NA NA t3827.T000186 MTA_on_LG3 1 SCMR (SPAD chlorophyll meter reading) GLM 71 desi chickpea genotypes accession CESSR114 NA 0 0 0 0 0.03455 10.1007/s13205-017-1057-2 NA NA t3827.T000187 MTA_on_LG4 1 SCMR (SPAD chlorophyll meter reading) GLM 71 desi chickpea genotypes accession CESSR433 NA 0 0 0 0 0.04755 10.1007/s13205-017-1057-2 NA NA t3827.T000188 MTA_on_LG5 1 SCMR (SPAD chlorophyll meter reading) GLM 71 desi chickpea genotypes accession GA9 NA 0 0 0 0 0.00856 10.1007/s13205-017-1057-2 NA NA t3827.T000189 MTA_on_LG5 1 SCMR (SPAD chlorophyll meter reading) GLM 71 desi chickpea genotypes accession GA9 NA 0 0 0 0 0.01191 10.1007/s13205-017-1057-2 NA NA t3827.T000190 MTA_on_LG5 1 SCMR (SPAD chlorophyll meter reading) GLM 71 desi chickpea genotypes accession ICCM0297 NA 0 0 0 0 0.0205 10.1007/s13205-017-1057-2 NA NA t3827.T000191 MTA_on_LG5 1 SCMR (SPAD chlorophyll meter reading) GLM 71 desi chickpea genotypes accession NCPGR267 NA 0 0 0 0 0.03812 10.1007/s13205-017-1057-2 NA NA t3827.T000192 MTA_on_LG5 1 SCMR (SPAD chlorophyll meter reading) MLM 71 desi chickpea genotypes accession GA9 NA 0 0 0 0 0.04221 10.1007/s13205-017-1057-2 NA NA t3827.T000193 MTA_on_LG5 1 SCMR (SPAD chlorophyll meter reading) MLM 71 desi chickpea genotypes accession ICCM0297 NA 0 0 0 0 0.04255 10.1007/s13205-017-1057-2 NA NA t3827.T000194 2 Dormancy GWAS FarmCPU Segregants F2 NA 10639022 0 0 0 0 5.80919208725428 10.1002/tpg2.20408 NA NA t3827.T000195 2 Dormancy GWAS FarmCPU Segregants F2 NA 12178134 0 0 0 0 5.18380391025453 10.1002/tpg2.20408 NA NA t3827.T000196 2 Dormancy GWAS FarmCPU Segregants F2 NA 14272815 0 0 0 0 4.60270614768733 10.1002/tpg2.20408 NA NA t3827.T000197 2 Dormancy GWAS FarmCPU Segregants F2 NA 15484294 0 0 0 0 9.61981444027051 10.1002/tpg2.20408 NA NA t3827.T000198 2 Dormancy GWAS FarmCPU Segregants F2 NA 1609010 0 0 0 0 6.42842980307057 10.1002/tpg2.20408 NA NA t3827.T000199 2 Dormancy GWAS FarmCPU Segregants F2 NA 16843839 0 0 0 0 4.2072378629481e 10.1002/tpg2.20408 NA NA t3827.T000200 2 Dormancy GWAS FarmCPU Segregants F2 NA 23843108 0 0 0 0 3.75354186367585 10.1002/tpg2.20408 NA NA t3827.T000201 2 Dormancy GWAS FarmCPU Segregants F2 NA 25316101 0 0 0 0 2.27004803548176 10.1002/tpg2.20408 NA NA t3827.T000202 2 Dormancy GWAS FarmCPU Segregants F2 NA 26255489 0 0 0 0 7.46221675311983 10.1002/tpg2.20408 NA NA t3827.T000203 2 Dormancy GWAS FarmCPU Segregants F2 NA 27975627 0 0 0 0 5.23499243750488 10.1002/tpg2.20408 NA NA t3827.T000204 2 Dormancy GWAS FarmCPU Segregants F2 NA 32459055 0 0 0 0 4.48410400443713 10.1002/tpg2.20408 NA NA t3827.T000205 2 Dormancy GWAS FarmCPU Segregants F2 NA 3303620 0 0 0 0 1.09951913278003 10.1002/tpg2.20408 NA NA t3827.T000206 2 Dormancy GWAS FarmCPU Segregants F2 NA 38860542 0 0 0 0 2.40485050560578 10.1002/tpg2.20408 NA NA t3827.T000207 2 Dormancy GWAS FarmCPU Segregants F2 NA 3944521 0 0 0 0 4.43892599881072 10.1002/tpg2.20408 NA NA t3827.T000208 2 Dormancy GWAS FarmCPU Segregants F2 NA 4423507 0 0 0 0 5.74021510916316 10.1002/tpg2.20408 NA NA t3827.T000209 2 Dormancy GWAS FarmCPU Segregants F2 NA 44542117 0 0 0 0 4.85457859376912 10.1002/tpg2.20408 NA NA t3827.T000210 2 Dormancy GWAS FarmCPU Segregants F2 NA 45680041 0 0 0 0 2.29651147933826 10.1002/tpg2.20408 NA NA t3827.T000211 2 Dormancy GWAS FarmCPU Segregants F2 NA 47307152 0 0 0 0 6.03651743166001 10.1002/tpg2.20408 NA NA t3827.T000212 2 Dormancy GWAS FarmCPU Segregants F2 NA 5081360 0 0 0 0 6.42574548126876 10.1002/tpg2.20408 NA NA t3827.T000213 2 Dormancy GWAS FarmCPU Segregants F2 NA 51184153 0 0 0 0 2.36602389694984 10.1002/tpg2.20408 NA NA t3827.T000214 2 Dormancy GWAS FarmCPU Segregants F2 NA 55714805 0 0 0 0 6.31092015608852 10.1002/tpg2.20408 NA NA t3827.T000215 2 Dormancy GWAS FarmCPU Segregants F2 NA 5740089 0 0 0 0 2.02834441897988 10.1002/tpg2.20408 NA NA t3827.T000216 2 Dormancy GWAS FarmCPU Segregants F2 NA 8174458 0 0 0 0 1.85650646053271 10.1002/tpg2.20408 NA NA t3827.T000217 qpv-01 2 Pollen viability (%) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021161.1.3663690 NA 2 0 0 CNC_021161.1.31430073 0 0 4.54 10.1371/journal.pone.0254957 NA NA t3827.T000218 qpv-01 2 Pollen viability (%) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021164.1.9654616 NA 5 0 0 CNC_021164.1.47240495 0 0 3.46 10.1371/journal.pone.0254957 NA NA t3827.T000219 qpv-02 2 Pollen viability (%) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021163.1.11351447 NA 4 0 0 CNC_021163.1.12812015 0 0 3.33 10.1371/journal.pone.0254957 NA NA t3827.T000220 qpv-03 2 Pollen viability (%) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021163.1.12812016 NA 4 0 0 CNC_021163.1.12811935 0 0 3.61 10.1371/journal.pone.0254957 NA NA t3827.T000221 q%podset01_1 3 %PodSet (Pod Setting Percentage) composite interval mapping (sing RIL recombinant inbred line Ca1_11685790 NA 1 0 0 Ca1_11372972 0 0 10.11 5.95 10.3390/ijms19082166 NA NA t3827.T000222 q%podset02_1 3 %PodSet (Pod Setting Percentage) composite interval mapping (mult RIL recombinant inbred line Ca1_34727065 NA 1 0 0 Ca1_8100906 0 0 28.41 3.904452 10.3390/ijms19082166 NA NA t3827.T000223 q%podset02_1 3 %PodSet (Pod Setting Percentage) composite interval mapping (sing RIL recombinant inbred line Ca1_34727065 NA 1 0 0 Ca1_8100906 0 0 27.41 4.45 10.3390/ijms19082166 NA NA t3827.T000224 q%podset03_4 3 %PodSet (Pod Setting Percentage) composite interval mapping (mult RIL recombinant inbred line Ca4_13699195 NA 4 0 0 Ca4_7818876 0 0 75.61 4.627579 10.3390/ijms19082166 NA NA t3827.T000225 q%podset03_4 3 %PodSet (Pod Setting Percentage) composite interval mapping (sing RIL recombinant inbred line Ca4_13699195 NA 4 0 0 Ca4_7818876 0 0 71.61 3.587405 10.3390/ijms19082166 NA NA t3827.T000226 q%podset03_4 3 %PodSet (Pod Setting Percentage) composite interval mapping (sing RIL recombinant inbred line Ca4_13699195 NA 4 0 0 Ca4_7818876 0 0 76.61 4.72 10.3390/ijms19082166 NA NA t3827.T000227 q%podset04_4 3 %PodSet (Pod Setting Percentage) composite interval mapping (sing RIL recombinant inbred line Ca4_7883680 NA 4 0 0 Ca4_4141314 0 0 98.41 3.99 10.3390/ijms19082166 NA NA t3827.T000228 q%podset05_5 3 %PodSet (Pod Setting Percentage) composite interval mapping (sing RIL recombinant inbred line Ca5_45745864 NA 5 0 0 Ca5_44760469 0 0 1.01 7.8 10.3390/ijms19082166 NA NA t3827.T000229 q%podset06_5 3 %PodSet (Pod Setting Percentage) composite interval mapping (mult RIL recombinant inbred line Ca5_44667768 NA 5 0 0 Ca5_46955940 0 0 6.41 9.480999 10.3390/ijms19082166 NA NA t3827.T000230 q%podset06_5 3 %PodSet (Pod Setting Percentage) composite interval mapping (sing RIL recombinant inbred line Ca5_44667768 NA 5 0 0 Ca5_46955940 0 0 6.41 8.04 10.3390/ijms19082166 NA NA t3827.T000231 q%podset06_5 3 %PodSet (Pod Setting Percentage) composite interval mapping (sing RIL recombinant inbred line Ca5_44667768 NA 5 0 0 Ca5_46955940 0 0 6.41 9.213898 10.3390/ijms19082166 NA NA t3827.T000232 q%podset07_5 3 %PodSet (Pod Setting Percentage) composite interval mapping (sing RIL recombinant inbred line Ca5_46955940 NA 5 0 0 Ca5_37724228 0 0 13.31 6.46 10.3390/ijms19082166 NA NA t3827.T000233 q%podset08_6 3 %PodSet (Pod Setting Percentage) composite interval mapping (mult RIL recombinant inbred line Ca6_14353624 NA 6 0 0 Ca6_7846335 0 0 64.41 5.973941 10.3390/ijms19082166 NA NA t3827.T000234 q%podset08_6 3 %PodSet (Pod Setting Percentage) composite interval mapping (sing RIL recombinant inbred line Ca6_14353624 NA 6 0 0 Ca6_7846335 0 0 63.41 6.22 10.3390/ijms19082166 NA NA t3827.T000235 q%podset08_6 3 %PodSet (Pod Setting Percentage) composite interval mapping (sing RIL recombinant inbred line Ca6_14353624 NA 6 0 0 Ca6_7846335 0 0 65.41 4.614549 10.3390/ijms19082166 NA NA t3827.T000236 q%podset08_6 3 %PodSet (Pod Setting Percentage) composite interval mapping (sing RIL recombinant inbred line Ca6_14353624 NA 6 0 0 Ca6_7846335 0 0 66.41 4.145494 10.3390/ijms19082166 NA NA t3827.T000237 q%podset09_8 3 %PodSet (Pod Setting Percentage) composite interval mapping (sing RIL recombinant inbred line SCAF2_5716888 NA 8 0 0 Ca8_14498074 0 0 0.01 3.279045 10.3390/ijms19082166 NA NA t3827.T000238 q%podset10_7 3 %PodSet (Pod Setting Percentage) composite interval mapping (mult RIL recombinant inbred line Ca7_3634430 NA 7 0 0 Ca7_6584610 0 0 7.61 3.520087 10.3390/ijms19082166 NA NA t3827.T000239 q%podset10_7 3 %PodSet (Pod Setting Percentage) composite interval mapping (sing RIL recombinant inbred line Ca7_3634430 NA 7 0 0 Ca7_6584610 0 0 9.61 3.606949 10.3390/ijms19082166 NA NA t3827.T000240 q%podset11_7 3 %PodSet (Pod Setting Percentage) composite interval mapping (mult RIL recombinant inbred line Ca7_6558397 NA 7 0 0 SCAF1_959831 0 0 18.81 3.461455 10.3390/ijms19082166 NA NA t3827.T000241 q%podset11_7 3 %PodSet (Pod Setting Percentage) composite interval mapping (sing RIL recombinant inbred line Ca7_6558397 NA 7 0 0 SCAF1_959831 0 0 19.81 3.559175 10.3390/ijms19082166 NA NA t3827.T000242 3 100 seed weight Interval mapping ICCV 2 × JG 11 F8 CaM0038 NA 0 0 CaM0463 0 0 3.01 2.65 10.1186/s12870-015-0491-8 NA NA t3827.T000243 3 100 seed weight Interval mapping ICCV 2 × JG 11 F8 CaM0463 NA 0 0 ICCM272 0 0 71.31 8.3 10.1186/s12870-015-0491-8 NA NA t3827.T000244 3 100 seed weight Interval mapping ICCV 2 × JG 11 F8 CaM0463 NA 0 0 ICCM272 0 0 72.31 10.59 10.1186/s12870-015-0491-8 NA NA t3827.T000245 3 100 seed weight Interval mapping ICCV 2 × JG 11 F8 CaM0463 NA 0 0 ICCM272 0 0 72.31 9.47 10.1186/s12870-015-0491-8 NA NA t3827.T000246 Ca100SW_LS1.1 3 100 seed weight composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA1_8682204 NA 0 0 SCA1_33504088 0 0 46.21 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000247 Ca100SW_LS4.1 3 100 seed weight composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA4_40568556 NA 0 0 SCA4_14861717 0 0 159.71 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000248 Ca100SW_LS7.1 3 100 seed weight composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA7_47907019 NA 0 0 SCA7_9555338 0 0 97.01 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000249 Ca100SW_LS7.1 3 100 seed weight composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA7_47907019 NA 0 0 SCA7_9555338 0 0 97.01 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000250 qhsw-01 3 100 seed weight (g) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021163.1.44961556 NA 4 0 0 CNC_021163.1.44507694 0 0 3.35 10.1371/journal.pone.0254957 NA NA t3827.T000251 qhsw-02 3 100 seed weight (g) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021164.1.33290198 NA 5 0 0 CNC_021164.1.19722937 0 0 3.73 10.1371/journal.pone.0254957 NA NA t3827.T000252 qhsw-02 3 100 seed weight (g) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021165.1.41420023 NA 6 0 0 CNC_021165.1.41646826 0 0 3.38 10.1371/journal.pone.0254957 NA NA t3827.T000253 3 100-seed weight GWAS, interval mapping 92 desi and kabuli accessions NA Kabuli-Chr6 16113521 0 0 0 8.2 2.8 × 10-5 10.1038/srep11166 NA NA t3827.T000254 3 100-seed weight GWAS, interval mapping 92 desi and kabuli accessions NA Kabuli-Chr6 16113522 0 0 0 8.2 2.7 × 10-5 10.1038/srep11166 NA NA t3827.T000255 3 100-seed weight GWAS, interval mapping 92 desi and kabuli accessions NA Kabuli-Chr6 16113523 0 0 0 8.2 2.7 × 10-5 10.1038/srep11166 NA NA t3827.T000256 3 100-seed weight GWAS, interval mapping 92 desi and kabuli accessions NA Kabuli-De novo 63305 0 0 0 6.5 1.2 × 10-5 10.1038/srep11166 NA NA t3827.T000257 3 100-seed weight ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA CaLG04 139220 0 bin_4_13378761 0 0 0.23 43.56 10.1038/srep15296 NA NA t3827.T000258 3 100-seed weight Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_1 NA 0 0 to Ca_Desi_SNP_2 0 0 0 - 0.146 13.5 10.1038/srep09468 NA NA t3827.T000259 3 100-seed weight Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_513 NA 0 0 to Ca_Desi_SNP_515 0 0 56.043 - 56.158 13 10.1038/srep09468 NA NA t3827.T000260 3 100-seed weight Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_636 NA 0 0 to Ca_Desi_SNP_638 0 0 64.655 - 64.817 7.39 10.1038/srep09468 NA NA t3827.T000261 3 100-seed weight Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_2088 NA 0 0 to Ca_Desi_SNP_2090 0 0 56.304 - 56.442 9.02 10.1038/srep09468 NA NA t3827.T000262 3 100-seed weight Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_2337 NA 0 0 to Ca_Desi_SNP_2338 0 0 23.805 - 24.875 14.5 10.1038/srep09468 NA NA t3827.T000263 3 100-seed weight Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_2608 NA 0 0 to Ca_Desi_SNP_2610 0 0 10.981 - 11.552 7.8 10.1038/srep09468 NA NA t3827.T000264 3 100-seed weight Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_2902 NA 0 0 to Ca_Desi_SNP_2904 0 0 56.733 - 57.25 8.37 10.1038/srep09468 NA NA t3827.T000265 3 100-seed weight Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_2931 NA 0 0 to Ca_Desi_SNP_2933 0 0 62.038 - 62.381 11.62 10.1038/srep09468 NA NA t3827.T000266 3 100-seed weight Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_3006 NA 0 0 to Ca_Desi_SNP_3007 0 0 0 - 1.014 8.28 10.1038/srep09468 NA NA t3827.T000267 3 100-seed weight Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_3387 NA 0 0 to Ca_Desi_SNP_3389 0 0 19.508 - 19.651 9.06 10.1038/srep09468 NA NA t3827.T000268 3 100-seed weight Interval mapping ICC 6013 x ICC 7346 F4 CaSNP78 NA 0 0 CaSNP81 0 0 68.7 - 76.1 5.7 10.1038/srep11166 NA NA t3827.T000269 3 100-seed weight Interval mapping ICC 6013 x ICC 7346 F4 CaSNP186 NA 0 0 CaSNP187 0 0 24.7 - 25.7 6.5 10.1038/srep11166 NA NA t3827.T000270 3 100-seed weight Interval mapping ICC 6013 x ICC 7346 F4 CaSNP198 NA 0 0 CaSNP200 0 0 12.5 - 19.7 8.2 10.1038/srep11166 NA NA t3827.T000271 3 100-seed weight Interval mapping ICC 6013 x ICC 7346 F4 CaSNP240 NA 0 0 CaSNP244 0 0 52.6 - 55 5.4 10.1038/srep11166 NA NA t3827.T000272 3 100-seed weight QTL-seq ICC 4958 × ICC 1882 RIL Ca_04364_11311944 NA CaLG04 11311944 0 0 0 64.58 10.1111/pbi.12567 NA NA t3827.T000273 3 100-seed weight QTL-seq ICC 4958 × ICC 1882 RIL Ca_04607_13822453 NA CaLG04 13822453 0 0 0 45.61 10.1111/pbi.12567 NA NA t3827.T000274 conSWqtl.1 3 100-seed weight whole genome average interval ma Rupali/Genesis836 population recombinant inbred line DArT595 NA CaLG05 0 0 DArT553 0 0 97.52 - 111.41 13.2902 10.3389/fpls.2021.667910 NA NA t3827.T000275 conSWqtl.2 3 100-seed weight whole genome average interval ma Rupali/Genesis836 population recombinant inbred line SNP14_C14_12_74(C) NA CaLG04 0 0 SNP15_C14_13_06 0 0 71.61 - 72.17 23.9314 10.3389/fpls.2021.667910 NA NA t3827.T000276 conSWqtl.3 3 100-seed weight whole genome average interval ma Rupali/Genesis836 population recombinant inbred line SNP14_C14_12_74(C) NA CaLG04 0 0 SNP15_C14_13_06 0 0 71.61 - 72.17 31.4225 10.3389/fpls.2021.667910 NA NA t3827.T000277 conSWqtl.4 3 100-seed weight whole genome average interval ma Rupali/Genesis836 population recombinant inbred line SNP246 NA CaLG06 0 0 SNP259(C) 0 0 131 - 133.94 5.5955 10.3389/fpls.2021.667910 NA NA t3827.T000278 salSWqtl.1 3 100-seed weight whole genome average interval ma Rupali/Genesis836 population recombinant inbred line DArT595 NA CaLG05 0 0 DArT553 0 0 97.52 - 111.41 20.5363 10.3389/fpls.2021.667910 NA NA t3827.T000279 salSWqtl.2 3 100-seed weight whole genome average interval ma Rupali/Genesis836 population recombinant inbred line SNP14_C14_12_74(C) NA CaLG04 0 0 SNP15_C14_13_06 0 0 71.61 - 72.17 16.5896 10.3389/fpls.2021.667910 NA NA t3827.T000280 salSWqtl.3 3 100-seed weight whole genome average interval ma Rupali/Genesis836 population recombinant inbred line SNP14_C14_12_74(C) NA CaLG04 0 0 SNP15_C14_13_06 0 0 71.61 - 72.17 22.3099 10.3389/fpls.2021.667910 NA NA t3827.T000281 3 100-seed weight ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_1_1202614 NA 0 0 bin_1_1195249 0 0 3.3853 10.1038/srep15296 NA NA t3827.T000282 3 100-seed weight ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_1_1202614 NA 0 0 bin_1_1195249 0 0 3.4474 10.1038/srep15296 NA NA t3827.T000283 3 100-seed weight ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_1_7476098 NA 0 0 bin_1_7412354 0 0 3.9975 10.1038/srep15296 NA NA t3827.T000284 3 100-seed weight ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_1_1202614 NA 0 0 bin_1_1195249 0 0 4.9101 10.1038/srep15296 NA NA t3827.T000285 3 100-seed weight ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_1_1202614 NA 0 0 bin_1_1195249 0 0 5.4696 10.1038/srep15296 NA NA t3827.T000286 3 100-seed weight ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_1_1202614 NA 0 0 bin_1_1195249 0 0 6.0157 10.1038/srep15296 NA NA t3827.T000287 3 100-seed weight ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_1_1202614 NA 0 0 bin_1_1195249 0 0 6.7042 10.1038/srep15296 NA NA t3827.T000288 3 100-seed weight ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_1_1244015 NA 0 0 bin_1_1229294 0 0 7.1069 10.1038/srep15296 NA NA t3827.T000289 3 100-seed weight ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_1_1202614 NA 0 0 bin_1_1195249 0 0 9.1332 10.1038/srep15296 NA NA t3827.T000290 3 100-seed weight ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA 0 0 bin_4_13378761 0 0 15.7451 10.1038/srep15296 NA NA t3827.T000291 3 100-seed weight ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA 0 0 bin_4_13378761 0 0 16.2008 10.1038/srep15296 NA NA t3827.T000292 3 100-seed weight ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13393647 NA 0 0 bin_4_13547009 0 0 18.3057 10.1038/srep15296 NA NA t3827.T000293 3 100-seed weight ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA 0 0 bin_4_13378761 0 0 22.9626 10.1038/srep15296 NA NA t3827.T000294 3 100-seed weight ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA 0 0 bin_4_13378761 0 0 27.2956 10.1038/srep15296 NA NA t3827.T000295 3 100-seed weight ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA 0 0 bin_4_13378761 0 0 32.471 10.1038/srep15296 NA NA t3827.T000296 3 100-seed weight ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA 0 0 bin_4_13378761 0 0 33.211 10.1038/srep15296 NA NA t3827.T000297 3 100-seed weight ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA 0 0 bin_4_13378761 0 0 33.9301 10.1038/srep15296 NA NA t3827.T000298 3 100-seed weight ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA 0 0 bin_4_13378761 0 0 34.6367 10.1038/srep15296 NA NA t3827.T000299 3 100-seed weight ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA 0 0 bin_4_13378761 0 0 35.7345 10.1038/srep15296 NA NA t3827.T000300 3 100-seed weight ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA 0 0 bin_4_13378761 0 0 39.2028 10.1038/srep15296 NA NA t3827.T000301 3 100-seed weight ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA 0 0 bin_4_13378761 0 0 43.5594 10.1038/srep15296 NA NA t3827.T000302 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca1_1083403 NA 0 0 NCPGR184 0 0 8.62299999999999 10.37785 10.1007/s00438-014-0932-3 NA NA t3827.T000303 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca1_1083388 NA 0 0 NCPGR184 0 0 8.62299999999999 14.879479 10.1007/s00438-014-0932-3 NA NA t3827.T000304 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca1_1083388 NA 0 0 NCPGR184 0 0 8.62299999999999 18.317047 10.1007/s00438-014-0932-3 NA NA t3827.T000305 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca1_1098874 NA 0 0 NCPGR184 0 0 8.929999999999993 15.728556 10.1007/s00438-014-0932-3 NA NA t3827.T000306 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca1_1098874 NA 0 0 NCPGR184 0 0 8.929999999999993 18.04126 10.1007/s00438-014-0932-3 NA NA t3827.T000307 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12558541 NA 0 0 Ca4_11276225 0 0 1.8120000000000118 16.2519 10.1007/s00438-014-0932-3 NA NA t3827.T000308 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12558541 NA 0 0 Ca4_11276225 0 0 1.8120000000000118 16.275787 10.1007/s00438-014-0932-3 NA NA t3827.T000309 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12558541 NA 0 0 Ca4_11276225 0 0 1.8120000000000118 18.106406 10.1007/s00438-014-0932-3 NA NA t3827.T000310 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12558541 NA 0 0 Ca4_11276225 0 0 1.8120000000000118 27.183496 10.1007/s00438-014-0932-3 NA NA t3827.T000311 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12558541 NA 0 0 Ca4_11276225 0 0 1.8120000000000118 30.770901 10.1007/s00438-014-0932-3 NA NA t3827.T000312 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12558541 NA 0 0 Ca4_11276225 0 0 1.8120000000000118 36.961998 10.1007/s00438-014-0932-3 NA NA t3827.T000313 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12558541 NA 0 0 Ca4_11276225 0 0 1.8120000000000118 38.217155 10.1007/s00438-014-0932-3 NA NA t3827.T000314 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12558541 NA 0 0 Ca4_11276225 0 0 1.8120000000000118 39.693811 10.1007/s00438-014-0932-3 NA NA t3827.T000315 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12558541 NA 0 0 Ca4_11276225 0 0 1.8120000000000118 41.583062 10.1007/s00438-014-0932-3 NA NA t3827.T000316 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12558541 NA 0 0 Ca4_11276225 0 0 1.8120000000000118 42.37785 10.1007/s00438-014-0932-3 NA NA t3827.T000317 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12558541 NA 0 0 Ca4_11276225 0 0 1.8120000000000118 44.062975 10.1007/s00438-014-0932-3 NA NA t3827.T000318 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12558541 NA 0 0 Ca4_11276225 0 0 1.8120000000000118 45.59392 10.1007/s00438-014-0932-3 NA NA t3827.T000319 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12558541 NA 0 0 Ca4_11276225 0 0 1.8120000000000118 7.520087 10.1007/s00438-014-0932-3 NA NA t3827.T000320 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12558541 NA 0 0 Ca4_11276225 0 0 1.8120000000000118 8.178067 10.1007/s00438-014-0932-3 NA NA t3827.T000321 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL STMS11 NA 0 0 Ca4_5390317 0 0 15.412000000000006 12.201954 10.1007/s00438-014-0932-3 NA NA t3827.T000322 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_16149998 NA 0 0 ICCM0249 0 0 3.1539999999999964 11.103149 10.1007/s00438-014-0932-3 NA NA t3827.T000323 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_16149998 NA 0 0 ICCM0249 0 0 3.1539999999999964 11.754615 10.1007/s00438-014-0932-3 NA NA t3827.T000324 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_16149998 NA 0 0 ICCM0249 0 0 3.1539999999999964 12.388708 10.1007/s00438-014-0932-3 NA NA t3827.T000325 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_16149998 NA 0 0 ICCM0249 0 0 3.1539999999999964 12.488599 10.1007/s00438-014-0932-3 NA NA t3827.T000326 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_16149998 NA 0 0 ICCM0249 0 0 3.1539999999999964 12.57329 10.1007/s00438-014-0932-3 NA NA t3827.T000327 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_16149998 NA 0 0 ICCM0249 0 0 3.1539999999999964 20.801303 10.1007/s00438-014-0932-3 NA NA t3827.T000328 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_16149998 NA 0 0 ICCM0249 0 0 3.1539999999999964 8.555917 10.1007/s00438-014-0932-3 NA NA t3827.T000329 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL STMS11 NA 0 0 CaM0615 0 0 3.798000000000002 11.333333 10.1007/s00438-014-0932-3 NA NA t3827.T000330 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13687456 NA 0 0 TAA170 0 0 4.1640000000000015 21.507058 10.1007/s00438-014-0932-3 NA NA t3827.T000331 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13687456 NA 0 0 TAA170 0 0 4.1640000000000015 34.160695 10.1007/s00438-014-0932-3 NA NA t3827.T000332 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13687456 NA 0 0 TAA170 0 0 4.1640000000000015 44.141151 10.1007/s00438-014-0932-3 NA NA t3827.T000333 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13687456 NA 0 0 TAA170 0 0 4.1640000000000015 44.679696 10.1007/s00438-014-0932-3 NA NA t3827.T000334 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13687456 NA 0 0 TAA170 0 0 4.1640000000000015 46.306189 10.1007/s00438-014-0932-3 NA NA t3827.T000335 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13687456 NA 0 0 TAA170 0 0 4.1640000000000015 50.132465 10.1007/s00438-014-0932-3 NA NA t3827.T000336 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13687456 NA 0 0 TAA170 0 0 4.1640000000000015 51.431053 10.1007/s00438-014-0932-3 NA NA t3827.T000337 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13687456 NA 0 0 NCPGR21 0 0 5.13900000000001 17.791531 10.1007/s00438-014-0932-3 NA NA t3827.T000338 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13687456 NA 0 0 NCPGR21 0 0 5.13900000000001 19.615635 10.1007/s00438-014-0932-3 NA NA t3827.T000339 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13687456 NA 0 0 NCPGR21 0 0 5.13900000000001 9.852334 10.1007/s00438-014-0932-3 NA NA t3827.T000340 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL STMS11 NA 0 0 CaM0856 0 0 5.173000000000002 11.404995 10.1007/s00438-014-0932-3 NA NA t3827.T000341 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL STMS11 NA 0 0 CaM0856 0 0 5.173000000000002 9.055375 10.1007/s00438-014-0932-3 NA NA t3827.T000342 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12982420 NA 0 0 STMS11 0 0 6.413999999999987 33.863192 10.1007/s00438-014-0932-3 NA NA t3827.T000343 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12982420 NA 0 0 STMS11 0 0 6.413999999999987 41.378936 10.1007/s00438-014-0932-3 NA NA t3827.T000344 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12982420 NA 0 0 STMS11 0 0 6.413999999999987 41.565689 10.1007/s00438-014-0932-3 NA NA t3827.T000345 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12982420 NA 0 0 STMS11 0 0 6.413999999999987 8.469055 10.1007/s00438-014-0932-3 NA NA t3827.T000346 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 CISR80 0 0 15.125000000000007 7.867535 10.1007/s00438-014-0932-3 NA NA t3827.T000347 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL TS57 NA 0 0 TR5 0 0 2.2139999999999986 7.811075 10.1007/s00438-014-0932-3 NA NA t3827.T000348 3 100-seed weight Interval mapping ICC 4958 × ICC 1882 RIL CaM0812 NA 0 0 NCPGR164 0 0 8.805999999999997 6.325733 10.1007/s00438-014-0932-3 NA NA t3827.T000349 MTA_at_NCPGR232 3 100-seed weight (100SW) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR232 NA 0 0 0 0 0.00349 33707355 NA NA t3827.T000350 MTA_at_NCPGR41 3 100-seed weight (100SW) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR41 NA 0 0 0 0 0.00755 33707355 NA NA t3827.T000351 MTA_at_TA59 3 100-seed weight (100SW) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet TA59 NA 0 0 0 0 0.0025 33707355 NA NA t3827.T000352 q100SW3.1 3 100-seed weight (100SW) composite interval mapping ICC 4958 X DCP 92-3 RIL population recombinant inbred line AX-123621911 NA 0 0 AX-123621900 0 0 153.4 - 167.6 3.3 10.1371/journal.pone.0251669 NA NA t3827.T000353 q100SW4.1 3 100-seed weight (100SW) composite interval mapping ICC 4958 X DCP 92-3 RIL population recombinant inbred line AX-123615349 NA 0 0 AX-123623881 0 0 216.23 - 223.07 6.9 10.1371/journal.pone.0251669 NA NA t3827.T000354 q100SW6.1 3 100-seed weight (100SW) composite interval mapping ICC 4958 X DCP 92-3 RIL population recombinant inbred line AX-123642585 NA 0 0 AX-123663334 0 0 43.66 - 43.7 5.7 10.1371/journal.pone.0251669 NA NA t3827.T000355 q100SW6.2 3 100-seed weight (100SW) composite interval mapping ICC 4958 X DCP 92-3 RIL population recombinant inbred line AX-123634395 NA 0 0 AX-123634519 0 0 87.91 - 88.02 5.2 10.1371/journal.pone.0251669 NA NA t3827.T000356 q100SW7.1 3 100-seed weight (100SW) composite interval mapping ICC 4958 X DCP 92-3 RIL population recombinant inbred line AX-123637282 NA 0 0 AX-123637281 0 0 47.61 - 47.77 3.6 10.1371/journal.pone.0251669 NA NA t3827.T000357 q100SW7.2 3 100-seed weight (100SW) composite interval mapping ICC 4958 X DCP 92-3 RIL population recombinant inbred line AX-123635676 NA 0 0 AX-123663528 0 0 139.78 - 140.04 3.7 10.1371/journal.pone.0251669 NA NA t3827.T000358 qYPP1.1 3 100-seed weight (100SW) composite interval mapping ICC 4958 X DCP 92-3 RIL population recombinant inbred line AX-123644170 NA 0 0 AX-123645113 0 0 15 - 46.8 5 10.1371/journal.pone.0251669 NA NA t3827.T000359 qSW-1.1 3 100-SW (100 seed weight) general linear model (GLM)-based RIL recombinant inbred line Ca1:363821 NA 0 0 Ca1:1162304 0 0 3.8 10.1007/s00122-019-03277-5 NA NA t3827.T000360 qSW-3.2 3 100-SW (100 seed weight) general linear model (GLM)-based RIL recombinant inbred line Ca3:22724462 NA 0 0 CaGM13632 0 0 86.7 10.1007/s00122-019-03277-5 NA NA t3827.T000361 qSW-8.1 3 100-SW (100 seed weight) general linear model (GLM)-based RIL recombinant inbred line Ca8:2866437 NA 0 0 Ca8:7244458 0 0 16 10.1007/s00122-019-03277-5 NA NA t3827.T000362 qSW-ABE-1.1 3 100-SW (100 seed weight) general linear model (GLM)-based RIL recombinant inbred line Ca1:363821 NA 0 0 Ca1:1162304 0 0 2.8 10.1007/s00122-019-03277-5 NA NA t3827.T000363 qSW-ABE-3.2 3 100-SW (100 seed weight) general linear model (GLM)-based RIL recombinant inbred line Ca3:22724462 NA 0 0 CaGM13632 0 0 86.7 10.1007/s00122-019-03277-5 NA NA t3827.T000364 qSW-ABE-4.2 3 100-SW (100 seed weight) general linear model (GLM)-based RIL recombinant inbred line Ca4:48194938 NA 0 0 Ca4:48359533 0 0 1 10.1007/s00122-019-03277-5 NA NA t3827.T000365 qSW-BIG-1.1 3 100-SW (100 seed weight) general linear model (GLM)-based RIL recombinant inbred line Ca1:363821 NA 0 0 Ca1:1162304 0 0 1.8 10.1007/s00122-019-03277-5 NA NA t3827.T000366 qSW-BIG-3.2 3 100-SW (100 seed weight) general linear model (GLM)-based RIL recombinant inbred line Ca3:22724462 NA 0 0 CaGM13632 0 0 86.7 10.1007/s00122-019-03277-5 NA NA t3827.T000367 qSW-GH-1.1 3 100-SW (100 seed weight) general linear model (GLM)-based RIL recombinant inbred line Ca1:363821 NA 0 0 Ca1:1162304 0 0 4.8 10.1007/s00122-019-03277-5 NA NA t3827.T000368 qSW-GH-3.2 3 100-SW (100 seed weight) general linear model (GLM)-based RIL recombinant inbred line Ca3:22724462 NA 0 0 CaGM13632 0 0 86.7 10.1007/s00122-019-03277-5 NA NA t3827.T000369 qSW-ICR-1.1 3 100-SW (100 seed weight) general linear model (GLM)-based RIL recombinant inbred line Ca1:363821 NA 0 0 Ca1:1162304 0 0 3.8 10.1007/s00122-019-03277-5 NA NA t3827.T000370 qSW-ICR-3.2 3 100-SW (100 seed weight) general linear model (GLM)-based RIL recombinant inbred line Ca3:22724462 NA 0 0 CaGM13632 0 0 86.7 10.1007/s00122-019-03277-5 NA NA t3827.T000371 qSW-ICR-4.2 3 100-SW (100 seed weight) general linear model (GLM)-based RIL recombinant inbred line Ca4:48194938 NA 0 0 Ca4:48359533 0 0 1 10.1007/s00122-019-03277-5 NA NA t3827.T000372 q100SWC5.1 3 100SW (100 seed weight) composite interval mapping RIL recombinant inbred line in F8 generation AX-123631523 NA 0 0 AX-123631537 0 0 58.7 3.2 10.3390/ijms21145058 NA NA t3827.T000373 q100SWC7.1 3 100SW (100 seed weight) composite interval mapping RIL recombinant inbred line in F8 generation AX-123636120 NA 0 0 AX-123636108 0 0 92.67 3 10.3390/ijms21145058 NA NA t3827.T000374 q100SWS2.1 3 100SW (100 seed weight) composite interval mapping RIL recombinant inbred line in F8 generation AX-123620430 NA 0 0 AX-123659350 0 0 39.16 3.4 10.3390/ijms21145058 NA NA t3827.T000375 q100SWS3.1 3 100SW (100 seed weight) composite interval mapping RIL recombinant inbred line in F8 generation AX-123659975 NA 0 0 AX-123622699 0 0 50.79 6.9 10.3390/ijms21145058 NA NA t3827.T000376 q100SWS3.1 3 100SW (100 seed weight) composite interval mapping RIL recombinant inbred line in F8 generation AX-123641496 NA 0 0 AX-123622502 0 0 56.21 3.1 10.3390/ijms21145058 NA NA t3827.T000377 3 Aboveground dry matter Interval mapping ICCV 2 × JG 11 F8 CaM0463 NA 0 0 ICCM272 0 0 71.31 3.31 10.1186/s12870-015-0491-8 NA NA t3827.T000378 3 Aboveground dry matter Interval mapping ICCV 2 × JG 11 F8 CaM0463 NA 0 0 ICCM272 0 0 72.31 2.87 10.1186/s12870-015-0491-8 NA NA t3827.T000379 3 Aboveground dry Matter Interval mapping ICCV 2 × JG 11 F8 CaM0463 NA 0 0 ICCM272 0 0 72.31 4.94 10.1186/s12870-015-0491-8 NA NA t3827.T000380 MTA_at_H4F07 3 Biological yield per plant (BYPP) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet H4F07 NA 0 0 0 0 1.98e-05 33707355 NA NA t3827.T000381 MTA_at_H5G12 3 Biological yield per plant (BYPP) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet H5G12 NA 0 0 0 0 0.00324 33707355 NA NA t3827.T000382 MTA_at_ICCM0297 3 Biological yield per plant (BYPP) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet ICCM0297 NA 0 0 0 0 0.00207 33707355 NA NA t3827.T000383 MTA_at_NCPGR13 3 Biological yield per plant (BYPP) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR13 NA 0 0 0 0 0.00368 33707355 NA NA t3827.T000384 MTA_at_NCPGR150 3 Biological yield per plant (BYPP) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR150 NA 0 0 0 0 0.00621 33707355 NA NA t3827.T000385 MTA_at_NCPGR156 3 Biological yield per plant (BYPP) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR156 NA 0 0 0 0 0.00192 33707355 NA NA t3827.T000386 MTA_at_NCPGR202 3 Biological yield per plant (BYPP) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR202 NA 0 0 0 0 0.00167 33707355 NA NA t3827.T000387 MTA_at_NCPGR249 3 Biological yield per plant (BYPP) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR249 NA 0 0 0 0 0.00774 33707355 NA NA t3827.T000388 MTA_at_STMS21 3 Biological yield per plant (BYPP) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet STMS21 NA 0 0 0 0 0.00941 33707355 NA NA t3827.T000389 MTA_at_TA8 3 Biological yield per plant (BYPP) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet TA8 NA 0 0 0 0 0.00611 33707355 NA NA t3827.T000390 CaBYPP_LS2.1 3 Biological yield/plant composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA2_35860429 NA 0 0 SCA2_29590953 0 0 55.91 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000391 CaBYPP_LS6.3 3 Biological yield/plant composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA6_7939281 NA 0 0 SCA6_7929339 0 0 114.01 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000392 CaBYPP_LS6.4 3 Biological yield/plant composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA6_7939281 NA 0 0 SCA6_7929339 0 0 115.01 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000393 CaBYPP_LS6.5 3 Biological yield/plant composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA6_7929647 NA 0 0 SCA6_7939281 0 0 115.31 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000394 CaBYPP_LS6.5 3 Biological yield/plant composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA6_7929647 NA 0 0 SCA6_7939281 0 0 115.31 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000395 CaBYPP_NS6.1 3 Biological yield/plant composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA6_9908036 NA 0 0 SCA6_10234443 0 0 52.31 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000396 CaBYPP_NS6.1 3 Biological yield/plant composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA6_9908036 NA 0 0 SCA6_10234443 0 0 52.31 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000397 CaBYPP_NS6.2 3 Biological yield/plant composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA6_10672468 NA 0 0 SCA6_10231199 0 0 58.71 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000398 3 Biomass ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_1_45827489 NA 0 0 bin_1_39391172 0 0 4.0874 10.1038/srep15296 NA NA t3827.T000399 3 Biomass ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13048918 NA 0 0 bin_4_13097584 0 0 3.8961 10.1038/srep15296 NA NA t3827.T000400 3 Biomass ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_7_3102566 NA 0 0 bin_7_3050024 0 0 3.6469 10.1038/srep15296 NA NA t3827.T000401 qbm01_1 3 BM (Biomass) composite interval mapping (sing RIL recombinant inbred line Ca1_11685790 NA 1 0 0 Ca1_11372972 0 0 10.11 5.54 10.3390/ijms19082166 NA NA t3827.T000402 qbm02_5 3 BM (Biomass) composite interval mapping (mult RIL recombinant inbred line Ca5_45745864 NA 5 0 0 Ca5_44760469 0 0 1.01 5.639522 10.3390/ijms19082166 NA NA t3827.T000403 qbm02_5 3 BM (Biomass) composite interval mapping (sing RIL recombinant inbred line Ca5_45745864 NA 5 0 0 Ca5_44760469 0 0 1.01 8 10.3390/ijms19082166 NA NA t3827.T000404 qbm03_5 3 BM (Biomass) composite interval mapping (sing RIL recombinant inbred line Ca5_29367250 NA 5 0 0 Ca5_28166322 0 0 28.41 3.51 10.3390/ijms19082166 NA NA t3827.T000405 qbm04_7 3 BM (Biomass) composite interval mapping (sing RIL recombinant inbred line Ca7_3634430 NA 7 0 0 Ca7_6584610 0 0 9.61 3.02 10.3390/ijms19082166 NA NA t3827.T000406 qbm05_3 3 BM (Biomass) composite interval mapping (sing RIL recombinant inbred line Ca3_36379017 NA 3 0 0 Ca3_36447274 0 0 11.41 3.235613 10.3390/ijms19082166 NA NA t3827.T000407 qbm06_4 3 BM (Biomass) composite interval mapping (sing RIL recombinant inbred line Ca4_7883680 NA 4 0 0 Ca4_4141314 0 0 100.41 3.491857 10.3390/ijms19082166 NA NA t3827.T000408 qbm07_1 3 BM (Biomass) composite interval mapping (mult RIL recombinant inbred line Ca1_1732919 NA 1 0 0 Ca1_4429044 0 0 46.51 4.436482 10.3390/ijms19082166 NA NA t3827.T000409 CaDPF_LS8.1 3 Days to pod filling composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA8_1742959 NA 0 0 SCA8_3665619 0 0 67.41 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000410 CaDPF_NS4.1 3 Days to pod filling composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA4_48714724 NA 0 0 SCA4_48657505 0 0 138.11 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000411 CaDPF_NS4.2 3 Days to pod filling composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA4_48657505 NA 0 0 SCA4_48720031 0 0 136.61 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000412 CaDPI_LS1.1 3 Days to pod initiation composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA1_19586410 NA 0 0 SCA1_19572921 0 0 153.61 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000413 CaDPI_LS6.1 3 Days to pod initiation composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA6_43908965 NA 0 0 SCA6_39028647 0 0 37.11 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000414 CaDPI_LS6.1 3 Days to pod initiation composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA6_43908965 NA 0 0 SCA6_39028647 0 0 37.11 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000415 CaDPI_LS6.1 3 Days to pod initiation composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA6_43908965 NA 0 0 SCA6_39028647 0 0 37.11 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000416 CaDPI_LS7.1 3 Days to pod initiation composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA7_47907019 NA 0 0 SCA7_9555338 0 0 97.01 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000417 CaDPI_LS7.2 3 Days to pod initiation composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA7_47907019 NA 0 0 SCA7_9555338 0 0 98.01 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000418 3 Field- 100-seed weight (g); 100SDW Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T000419 3 Field- Seed yield (kg ha-1); YLD Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T000420 3 Filled pod number Interval mapping ICCV 2 × JG 11 F8 CKAM0993 NA 0 0 CKAM1317 0 0 74.61 3.82 10.1186/s12870-015-0491-8 NA NA t3827.T000421 MTA_at_CESSR172 3 Filled_pod_% Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet CESSR172 NA 0 0 0 0 0.00842 33707355 NA NA t3827.T000422 MTA_at_CESSR43 3 Filled_pod_% Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet CESSR43 NA 0 0 0 0 0.00377 33707355 NA NA t3827.T000423 MTA_at_GA11 3 Filled_pod_% Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet GA11 NA 0 0 0 0 0.00731 33707355 NA NA t3827.T000424 MTA_at_GA11 3 Filled_pod_% Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet GA11 NA 0 0 0 0 0.00901 33707355 NA NA t3827.T000425 MTA_at_H2B061 3 Filled_pod_% Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet H2B061 NA 0 0 0 0 0.00631 33707355 NA NA t3827.T000426 MTA_at_NCPGR156 3 Filled_pod_% Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR156 NA 0 0 0 0 0.00194 33707355 NA NA t3827.T000427 MTA_at_TA8 3 Filled_pod_% Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet TA8 NA 0 0 0 0 0.00176 33707355 NA NA t3827.T000428 MTA_at_TAA60 3 Filled_pod_% Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet TAA60 NA 0 0 0 0 0.00974 33707355 NA NA t3827.T000429 qfpod01_2 3 FPod (Number of Filled Pods Per Plot) composite interval mapping (mult RIL recombinant inbred line Ca2_34481663 NA 2 0 0 Ca2_35860429 0 0 65.81 3.947883 10.3390/ijms19082166 NA NA t3827.T000430 qfpod01_2 3 FPod (Number of Filled Pods Per Plot) composite interval mapping (sing RIL recombinant inbred line Ca2_34481663 NA 2 0 0 Ca2_35860429 0 0 64.81 3.952226 10.3390/ijms19082166 NA NA t3827.T000431 qfpod01_2 3 FPod (Number of Filled Pods Per Plot) composite interval mapping (sing RIL recombinant inbred line Ca2_34481663 NA 2 0 0 Ca2_35860429 0 0 65.81 3.38 10.3390/ijms19082166 NA NA t3827.T000432 qfpod02_5 3 FPod (Number of Filled Pods Per Plot) composite interval mapping (mult RIL recombinant inbred line Ca5_44667768 NA 5 0 0 Ca5_46955940 0 0 5.41 9.413681 10.3390/ijms19082166 NA NA t3827.T000433 qfpod02_5 3 FPod (Number of Filled Pods Per Plot) composite interval mapping (sing RIL recombinant inbred line Ca5_44667768 NA 5 0 0 Ca5_46955940 0 0 4.41 8.37 10.3390/ijms19082166 NA NA t3827.T000434 qfpod02_5 3 FPod (Number of Filled Pods Per Plot) composite interval mapping (sing RIL recombinant inbred line Ca5_44667768 NA 5 0 0 Ca5_46955940 0 0 5.41 7.785016 10.3390/ijms19082166 NA NA t3827.T000435 qfpod03_6 3 FPod (Number of Filled Pods Per Plot) composite interval mapping (mult RIL recombinant inbred line Ca6_14353624 NA 6 0 0 Ca6_7846335 0 0 62.41 5.220413 10.3390/ijms19082166 NA NA t3827.T000436 qfpod03_6 3 FPod (Number of Filled Pods Per Plot) composite interval mapping (sing RIL recombinant inbred line Ca6_14353624 NA 6 0 0 Ca6_7846335 0 0 62.41 5.1 10.3390/ijms19082166 NA NA t3827.T000437 qfpod03_6 3 FPod (Number of Filled Pods Per Plot) composite interval mapping (sing RIL recombinant inbred line Ca6_14353624 NA 6 0 0 Ca6_7846335 0 0 63.41 4.065147 10.3390/ijms19082166 NA NA t3827.T000438 qfpod04_7 3 FPod (Number of Filled Pods Per Plot) composite interval mapping (mult RIL recombinant inbred line Ca7_10657307 NA 7 0 0 Ca7_13059720 0 0 37.11 3.84582 10.3390/ijms19082166 NA NA t3827.T000439 qfpod04_7 3 FPod (Number of Filled Pods Per Plot) composite interval mapping (sing RIL recombinant inbred line Ca7_10657307 NA 7 0 0 Ca7_13059720 0 0 37.11 3.92 10.3390/ijms19082166 NA NA t3827.T000440 qgy01_1 3 GY (Grain Yield Per Plot) composite interval mapping (mult RIL recombinant inbred line Ca1_7647424 NA 1 0 0 Ca1_1732877 0 0 40.01 5.837134 10.3390/ijms19082166 NA NA t3827.T000441 qgy01_1 3 GY (Grain Yield Per Plot) composite interval mapping (sing RIL recombinant inbred line Ca1_7647424 NA 1 0 0 Ca1_1732877 0 0 40.01 4.56 10.3390/ijms19082166 NA NA t3827.T000442 qgy01_1 3 GY (Grain Yield Per Plot) composite interval mapping (sing RIL recombinant inbred line Ca1_7647424 NA 1 0 0 Ca1_1732877 0 0 40.01 6.373507 10.3390/ijms19082166 NA NA t3827.T000443 qgy02_5 3 GY (Grain Yield Per Plot) composite interval mapping (mult RIL recombinant inbred line Ca5_44667768 NA 5 0 0 Ca5_46955940 0 0 4.41 13.166124 10.3390/ijms19082166 NA NA t3827.T000444 qgy02_5 3 GY (Grain Yield Per Plot) composite interval mapping (sing RIL recombinant inbred line Ca5_44667768 NA 5 0 0 Ca5_46955940 0 0 4.41 11.69 10.3390/ijms19082166 NA NA t3827.T000445 qgy02_5 3 GY (Grain Yield Per Plot) composite interval mapping (sing RIL recombinant inbred line Ca5_44667768 NA 5 0 0 Ca5_46955940 0 0 4.41 11.995657 10.3390/ijms19082166 NA NA t3827.T000446 qgy03_6 3 GY (Grain Yield Per Plot) composite interval mapping (mult RIL recombinant inbred line Ca6_14353624 NA 6 0 0 Ca6_7846335 0 0 62.41 3.58089 10.3390/ijms19082166 NA NA t3827.T000447 qgy03_6 3 GY (Grain Yield Per Plot) composite interval mapping (sing RIL recombinant inbred line Ca6_14353624 NA 6 0 0 Ca6_7846335 0 0 62.41 3.213898 10.3390/ijms19082166 NA NA t3827.T000448 qgy03_6 3 GY (Grain Yield Per Plot) composite interval mapping (sing RIL recombinant inbred line Ca6_14353624 NA 6 0 0 Ca6_7846335 0 0 62.41 3.68 10.3390/ijms19082166 NA NA t3827.T000449 qgy04_7 3 GY (Grain Yield Per Plot) composite interval mapping (sing RIL recombinant inbred line Ca7_10657307 NA 7 0 0 Ca7_13059720 0 0 37.11 3.58 10.3390/ijms19082166 NA NA t3827.T000450 qgy05_1 3 GY (Grain Yield Per Plot) composite interval mapping (mult RIL recombinant inbred line Ca1_34727065 NA 1 0 0 Ca1_8100906 0 0 28.41 4.162866 10.3390/ijms19082166 NA NA t3827.T000451 qgy05_1 3 GY (Grain Yield Per Plot) composite interval mapping (sing RIL recombinant inbred line Ca1_34727065 NA 1 0 0 Ca1_8100906 0 0 28.41 4.236699 10.3390/ijms19082166 NA NA t3827.T000452 qgy06_1 3 GY (Grain Yield Per Plot) composite interval mapping (mult RIL recombinant inbred line Ca1_1732919 NA 1 0 0 Ca1_4429044 0 0 45.51 5.656895 10.3390/ijms19082166 NA NA t3827.T000453 qgy06_1 3 GY (Grain Yield Per Plot) composite interval mapping (sing RIL recombinant inbred line Ca1_1732919 NA 1 0 0 Ca1_4429044 0 0 45.51 6.440825 10.3390/ijms19082166 NA NA t3827.T000454 qgy07_7 3 GY (Grain Yield Per Plot) composite interval mapping (mult RIL recombinant inbred line SCAF1_959831 NA 7 0 0 Ca7_10657307 0 0 36.21 3.509229 10.3390/ijms19082166 NA NA t3827.T000455 3 Harvest index ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA CaLG08 49660 0 bin_8_5984553 0 0 9.47 8.01 10.1038/srep15296 NA NA t3827.T000456 3 Harvest index Interval mapping ICCV 2 × JG 11 F8 CKAM0003 NA 0 0 CKAM1003 0 0 123.31 12.23 10.1186/s12870-015-0491-8 NA NA t3827.T000457 3 Harvest index Interval mapping ICCV 2 × JG 11 F8 CKAM0003 NA 0 0 CKAM1003 0 0 123.31 20.61 10.1186/s12870-015-0491-8 NA NA t3827.T000458 3 Harvest Index Interval mapping ICCV 2 × JG 11 F8 CaM1077 NA 0 0 CaM1797 0 0 48.01 2.63 10.1186/s12870-015-0491-8 NA NA t3827.T000459 3 Harvest Index Interval mapping ICCV 2 × JG 11 F8 CaM0463 NA 0 0 ICCM272 0 0 71.31 14.56 10.1186/s12870-015-0491-8 NA NA t3827.T000460 3 Harvest index Interval mapping ICCV 2 × JG 11 F8 CaM0463 NA 0 0 ICCM272 0 0 72.31 11.04 10.1186/s12870-015-0491-8 NA NA t3827.T000461 3 Harvest index Interval mapping ICCV 2 × JG 11 F8 CaM0463 NA 0 0 ICCM272 0 0 72.31 8.04 10.1186/s12870-015-0491-8 NA NA t3827.T000462 3 Harvest Index Interval mapping ICCV 2 × JG 11 F8 CKAM1903 NA 0 0 CKAM0343 0 0 0.01 3.09 10.1186/s12870-015-0491-8 NA NA t3827.T000463 3 Harvest index Interval mapping ICCV 2 × JG 11 F8 CKAM1903 NA 0 0 CKAM0343 0 0 3.31 16.06 10.1186/s12870-015-0491-8 NA NA t3827.T000464 3 Harvest index Interval mapping ICCV 2 × JG 11 F8 CKAM1903 NA 0 0 CKAM0343 0 0 3.31 27.93 10.1186/s12870-015-0491-8 NA NA t3827.T000465 CaBYPP_NS6.3 3 Harvest index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA6_52007475 NA 0 0 SCA6_44667261 0 0 170.81 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000466 CaHI_LS6.2 3 Harvest index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA6_8170633 NA 0 0 SCA6_7835024 0 0 100.21 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000467 CaHI_LS8.1 3 Harvest index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA8_14325980 NA 0 0 SCA8_7197652 0 0 43.11 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000468 CaHI_NS5.1 3 Harvest index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA5_30627756 NA 0 0 SCA5_41304451 0 0 42.11 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000469 CaHI_NS6.1 3 Harvest index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA6_7722925 NA 0 0 SCA6_9536577 0 0 84.21 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000470 CaHI_NS7.1 3 Harvest index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA7_36854123 NA 0 0 SCA7_44149692 0 0 35.81 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000471 CaHI_NS7.1 3 Harvest index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA7_36854123 NA 0 0 SCA7_44149692 0 0 35.81 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000472 CaHI_NS7.2 3 Harvest index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA7_42355015 NA 0 0 SCA7_30768244 0 0 142.71 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000473 3 Harvest index ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_12935549 NA 0 0 bin_4_12982420 0 0 5.5165 10.1038/srep15296 NA NA t3827.T000474 3 Harvest index ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_6_2804634 NA 0 0 bin_6_2917216 0 0 3.3175 10.1038/srep15296 NA NA t3827.T000475 3 Harvest index ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_6_5555667 NA 0 0 bin_6_6943324 0 0 6.1659 10.1038/srep15296 NA NA t3827.T000476 3 Harvest index ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_7_31651413 NA 0 0 bin_7_31652416 0 0 3.1564 10.1038/srep15296 NA NA t3827.T000477 3 Harvest index ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_3962288 NA 0 0 bin_8_3135881 0 0 3.1808 10.1038/srep15296 NA NA t3827.T000478 3 Harvest index ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 4.1156 10.1038/srep15296 NA NA t3827.T000479 3 Harvest index ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_3992475 NA 0 0 bin_8_3962288 0 0 4.6356 10.1038/srep15296 NA NA t3827.T000480 3 Harvest index ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 8.0083 10.1038/srep15296 NA NA t3827.T000481 3 Harvest index Interval mapping ICC 4958 × ICC 1882 RIL H2A08 NA 0 0 Ca1_6540035 0 0 16.285000000000004 3.30076 10.1007/s00438-014-0932-3 NA NA t3827.T000482 3 Harvest index Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12558541 NA 0 0 Ca4_11276225 0 0 1.8120000000000118 8.692725 10.1007/s00438-014-0932-3 NA NA t3827.T000483 3 Harvest index Interval mapping ICC 4958 × ICC 1882 RIL Ca4_11441735 NA 0 0 NCPGR21 0 0 8.239000000000004 7.828447 10.1007/s00438-014-0932-3 NA NA t3827.T000484 3 Harvest index Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 CISR80 0 0 15.125000000000007 7.758958 10.1007/s00438-014-0932-3 NA NA t3827.T000485 3 Harvest index Interval mapping ICC 4958 × ICC 1882 RIL CISR80 NA 0 0 Ca8_714974 0 0 5.680999999999997 5.450597 10.1007/s00438-014-0932-3 NA NA t3827.T000486 3 Harvest index Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 Ca8_3050452 0 0 7.330999999999996 14.51683 10.1007/s00438-014-0932-3 NA NA t3827.T000487 3 Harvest index Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 Ca8_3050452 0 0 7.330999999999996 8.110749 10.1007/s00438-014-0932-3 NA NA t3827.T000488 3 Harvest index Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 Ca8_3050452 0 0 7.330999999999996 8.961998 10.1007/s00438-014-0932-3 NA NA t3827.T000489 3 Harvest index Interval mapping ICC 4958 × ICC 1882 RIL Ca8_3050452 NA 0 0 CISR80 0 0 7.794000000000011 5.704669 10.1007/s00438-014-0932-3 NA NA t3827.T000490 qhi-01 3 Harvest index (HI) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021160.1.35223851 NA 1 0 0 CNC_021160.1.35250808 0 0 3.72 10.1371/journal.pone.0254957 NA NA t3827.T000491 qhi-02 3 Harvest index (HI) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021160.1.35250799 NA 1 0 0 CNC_021160.1.35301203 0 0 3.07 10.1371/journal.pone.0254957 NA NA t3827.T000492 qhi-03 3 Harvest index (HI) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021160.1.18699653 NA 1 0 0 CNC_021160.1.30785636 0 0 3.09 10.1371/journal.pone.0254957 NA NA t3827.T000493 MTA_at_CakTpSSR02719 3 Harvest index (HI) % Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet CakTpSSR02719 NA 0 0 0 0 0.00546 33707355 NA NA t3827.T000494 MTA_at_CESSR159 3 Harvest index (HI) % Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet CESSR159 NA 0 0 0 0 6.25e-05 33707355 NA NA t3827.T000495 MTA_at_ICCM0297 3 Harvest index (HI) % Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet ICCM0297 NA 0 0 0 0 0.0086 33707355 NA NA t3827.T000496 qhi01_1 3 HI (Harvest Index) composite interval mapping (mult RIL recombinant inbred line Ca1_7647424 NA 1 0 0 Ca1_1732877 0 0 40.01 3.361564 10.3390/ijms19082166 NA NA t3827.T000497 qhi01_1 3 HI (Harvest Index) composite interval mapping (sing RIL recombinant inbred line Ca1_7647424 NA 1 0 0 Ca1_1732877 0 0 40.01 4.456026 10.3390/ijms19082166 NA NA t3827.T000498 qhi01_1 3 HI (Harvest Index) composite interval mapping (sing RIL recombinant inbred line Ca1_7647424 NA 1 0 0 Ca1_1732877 0 0 42.01 8.82519 10.3390/ijms19082166 NA NA t3827.T000499 qhi02_4 3 HI (Harvest Index) composite interval mapping (sing RIL recombinant inbred line Ca4_7883680 NA 4 0 0 Ca4_4141314 0 0 100.41 7.856678 10.3390/ijms19082166 NA NA t3827.T000500 qhi03_8 3 HI (Harvest Index) composite interval mapping (sing RIL recombinant inbred line SCAF2_5716888 NA 8 0 0 Ca8_14498074 0 0 2.01 3.470141 10.3390/ijms19082166 NA NA t3827.T000501 qhi04_1 3 HI (Harvest Index) composite interval mapping (sing RIL recombinant inbred line Ca1_11685790 NA 1 0 0 Ca1_11372972 0 0 10.71 3.220413 10.3390/ijms19082166 NA NA t3827.T000502 qhi05_1 3 HI (Harvest Index) composite interval mapping (sing RIL recombinant inbred line Ca1_1732919 NA 1 0 0 Ca1_4429044 0 0 46.51 5.170467 10.3390/ijms19082166 NA NA t3827.T000503 qhi06_5 3 HI (Harvest Index) composite interval mapping (mult RIL recombinant inbred line Ca5_44667768 NA 5 0 0 Ca5_46955940 0 0 5.41 6.021716 10.3390/ijms19082166 NA NA t3827.T000504 qhi06_5 3 HI (Harvest Index) composite interval mapping (sing RIL recombinant inbred line Ca5_44667768 NA 5 0 0 Ca5_46955940 0 0 5.41 12.988056 10.3390/ijms19082166 NA NA t3827.T000505 qhi07_6 3 HI (Harvest Index) composite interval mapping (sing RIL recombinant inbred line Ca6_14353624 NA 6 0 0 Ca6_7846335 0 0 66.41 7.200869 10.3390/ijms19082166 NA NA t3827.T000506 qhi08_7 3 HI (Harvest Index) composite interval mapping (sing RIL recombinant inbred line Ca7_3634430 NA 7 0 0 Ca7_6584610 0 0 5.61 3.187839 10.3390/ijms19082166 NA NA t3827.T000507 qhi09_6 3 HI (Harvest Index) composite interval mapping (mult RIL recombinant inbred line Ca6_7846335 NA 6 0 0 Ca6_2549991 0 0 90.71 5.163952 10.3390/ijms19082166 NA NA t3827.T000508 CaFP_NS6.1 3 Number of filled pods composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA6_34028484 NA 0 0 SCA6_36622908 0 0 141.4 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000509 conFPqtl.1 3 Number of filled pods whole genome average interval ma Rupali/Genesis836 population recombinant inbred line DArT1204(C) NA CaLG07 0 0 SNP286(C) 0 0 43.73 - 46.27 3.7095 10.3389/fpls.2021.667910 NA NA t3827.T000510 conFPqtl.2 3 Number of filled pods whole genome average interval ma Rupali/Genesis836 population recombinant inbred line SNP14_C14_12_74(C) NA CaLG04 0 0 SNP15_C14_13_06 0 0 71.61 - 72.17 14.0499 10.3389/fpls.2021.667910 NA NA t3827.T000511 salFPqtl.1 3 Number of filled pods whole genome average interval ma Rupali/Genesis836 population recombinant inbred line SNP201 NA CaLG04 0 0 SNP2_Ca4_75 0 0 27.87 - 29.89 6.9352 10.3389/fpls.2021.667910 NA NA t3827.T000512 salFPqtl.2 3 Number of filled pods whole genome average interval ma Rupali/Genesis836 population recombinant inbred line DArT417 NA CaLG04 0 0 SNP203 0 0 88.95 - 90.37 5.1737 10.3389/fpls.2021.667910 NA NA t3827.T000513 saltolFPqtl.1 3 Number of filled pods QTL analysis using residuals Rupali/Genesis836 population recombinant inbred line SNP201 NA CaLG04 0 0 SNP2_Ca4_75 0 0 27.87 - 29.89 3.1013 10.3389/fpls.2021.667910 NA NA t3827.T000514 qnpp-01 3 Number of pod per plant composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021160.1.41430352 NA 1 0 0 CNC_021160.1.41044856 0 0 4.53 10.1371/journal.pone.0254957 NA NA t3827.T000515 qnpp-02 3 Number of pod per plant composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021162.1.38774358 NA 3 0 0 CNC_021162.1.29358942 0 0 4.02 10.1371/journal.pone.0254957 NA NA t3827.T000516 MTA_at_CESSR172 3 Number of pods per plant (NPP) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet CESSR172 NA 0 0 0 0 0.00879 33707355 NA NA t3827.T000517 MTA_at_ICCM0297 3 Number of pods per plant (NPP) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet ICCM0297 NA 0 0 0 0 0.0016 33707355 NA NA t3827.T000518 MTA_at_NCPGR13 3 Number of pods per plant (NPP) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR13 NA 0 0 0 0 0.00294 33707355 NA NA t3827.T000519 MTA_at_NCPGR199 3 Number of pods per plant (NPP) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR199 NA 0 0 0 0 0.00612 33707355 NA NA t3827.T000520 MTA_at_TA59 3 Number of pods per plant (NPP) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet TA59 NA 0 0 0 0 0.00249 33707355 NA NA t3827.T000521 MTA_at_TA8 3 Number of pods per plant (NPP) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet TA8 NA 0 0 0 0 0.00837 33707355 NA NA t3827.T000522 MTA_at_TS53 3 Number of pods per plant (NPP) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet TS53 NA 0 0 0 0 0.0014 33707355 NA NA t3827.T000523 MTA_at_H4F09 3 Plant height (PH) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet H4F09 NA 0 0 0 0 0.00403 33707355 NA NA t3827.T000524 MTA_at_H5G12 3 Plant height (PH) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet H5G12 NA 0 0 0 0 0.00231 33707355 NA NA t3827.T000525 3 Pod and seed number/plant Interval mapping ICC 4958 × ICC 12968 F4 Ca-IISNP116 NA 0 0 Ca-IISNP119 0 0 127.6 - 130.9 8.5, 7.8 10.1038/srep09264 NA NA t3827.T000526 3 Pod and seed number/plant Interval mapping ICC 4958 × ICC 12968 F4 Ca-IISNP18 NA 0 0 Ca-IISNP20 0 0 16.8 - 18.6 4.6 10.1038/srep09264 NA NA t3827.T000527 3 Pod and seed number/plant Interval mapping ICC 4958 × ICC 12968 F4 Ca-IISNP32 NA 0 0 Ca-IISNP35 0 0 29.5 - 32.1 5.1 10.1038/srep09264 NA NA t3827.T000528 3 Pod and seed number/plant Interval mapping ICC 4958 × ICC 12968 F4 Ca-IISNP330 NA 0 0 Ca-IISNP332 0 0 154.9 - 157.5 10.5, 9.8 10.1038/srep09264 NA NA t3827.T000529 3 Pod and seed number/plant Interval mapping ICC 4958 × ICC 12968 F4 Ca-IISNP398 NA 0 0 Ca-IISNP401 0 0 24.7 - 27.7 6.4 10.1038/srep09264 NA NA t3827.T000530 3 Pod and seed number/plant Interval mapping ICC 4958 × ICC 12968 F4 Ca-IISNP649 NA 0 0 Ca-IISNP651 0 0 12.7 - 123.1 11.4, 10.2 10.1038/srep09264 NA NA t3827.T000531 3 Pod and seed number/plant Interval mapping ICC 4958 × ICC 12968 F4 Ca-IISNP831 NA 0 0 Ca-IISNP834 0 0 89.1 - 92.5 8.5, 7.3 10.1038/srep09264 NA NA t3827.T000532 3 Pod and seed number/plant Interval mapping ICC 4958 × ICC 12968 F4 Ca-IISNP1104 NA 0 0 Ca-IISNP1108 0 0 154.8 - 157.6 4.8 10.1038/srep09264 NA NA t3827.T000533 3 Pod and seed number/plant Interval mapping ICC 4958 × ICC 12968 F4 Ca-IISNP1332 NA 0 0 Ca-IISNP1335 0 0 199.5 - 202.2 5.7 10.1038/srep09264 NA NA t3827.T000534 3 Pod and seed number/plant Interval mapping ICC 4958 × ICC 12968 F4 Ca-IISNP1487 NA 0 0 Ca-IISNP1489 0 0 152.9 - 154.6 9.6, 8.5 10.1038/srep09264 NA NA t3827.T000535 3 Pod number/plant GWAS, interval mapping 92 desi and kabuli accessions NA Desi- Sc-4437 15942 0 0 0 4.7 × 10-5 10.1038/srep11166 NA NA t3827.T000536 3 Pod number/plant GWAS, interval mapping 92 desi and kabuli accessions NA Desi-Chr2 595853 0 0 0 7.4 4.5 × 10-5, 7.6 10.1038/srep11166 NA NA t3827.T000537 3 Pod number/plant GWAS, interval mapping 92 desi and kabuli accessions NA Kabuli- Sc-193 186515 0 0 0 7.2 6.8 × 10-5 10.1038/srep11166 NA NA t3827.T000538 3 Pod number/plant GWAS, interval mapping 92 desi and kabuli accessions NA Kabuli- Sc-193 186523 0 0 0 8.4 6.2 × 10-5 10.1038/srep11166 NA NA t3827.T000539 3 Pod number/plant GWAS, interval mapping 92 desi and kabuli accessions NA Kabuli-Chr6 27310325 0 0 0 8 7.7 × 10-5 10.1038/srep11166 NA NA t3827.T000540 3 Pod number/plant GWAS, interval mapping 92 desi and kabuli accessions NA Kabuli-Chr6 41708309 0 0 0 7.4 3.6 × 10-5 10.1038/srep11166 NA NA t3827.T000541 3 Pod number/plant GWAS, interval mapping 92 desi and kabuli accessions NA Kabuli-De novo 316184 0 0 0 9.7 5.5 × 10-5 10.1038/srep11166 NA NA t3827.T000542 3 Pod number/plant Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_40 NA 0 0 to Ca_Desi_SNP_42 0 0 13.733 - 14.48 8.31 10.1038/srep09468 NA NA t3827.T000543 3 Pod number/plant Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_250 NA 0 0 to Ca_Desi_SNP_252 0 0 34.293 - 34.453 8.11 10.1038/srep09468 NA NA t3827.T000544 3 Pod number/plant Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_15 NA 0 0 to Ca_Desi_SNP_17 0 0 5.54 - 7.518 8.2 10.1038/srep09468 NA NA t3827.T000545 3 Pod number/plant Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_591 NA 0 0 to Ca_Desi_SNP_595 0 0 61.419 - 61.738 14 10.1038/srep09468 NA NA t3827.T000546 3 Pod number/plant Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_655 NA 0 0 to Ca_Desi_SNP_657 0 0 67.106 - 67.22 7.25 10.1038/srep09468 NA NA t3827.T000547 3 Pod number/plant Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_946 NA 0 0 to Ca_Desi_SNP_948 0 0 48.4 - 48.982 10.56 10.1038/srep09468 NA NA t3827.T000548 3 Pod number/plant Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_1012 NA 0 0 to Ca_Desi_SNP_1014 0 0 58.324 - 58.377 8.12 10.1038/srep09468 NA NA t3827.T000549 3 Pod number/plant Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_1842 NA 0 0 to Ca_Desi_SNP_1844 0 0 42.717 - 43.31 9.16 10.1038/srep09468 NA NA t3827.T000550 3 Pod number/plant Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_2011 NA 0 0 to Ca_Desi_SNP_2013 0 0 51.285 - 51.308 8.32 10.1038/srep09468 NA NA t3827.T000551 3 Pod number/plant Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_2023 NA 0 0 to Ca_Desi_SNP_2025 0 0 51.702 - 51.717 9.74 10.1038/srep09468 NA NA t3827.T000552 3 Pod number/plant Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_2903 NA 0 0 to Ca_Desi_SNP_2907 0 0 56.755 - 57.422 7.86 10.1038/srep09468 NA NA t3827.T000553 3 Pod number/plant Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_2993 NA 0 0 to Ca_Desi_SNP_2995 0 0 77.157 - 78.929 9.22 10.1038/srep09468 NA NA t3827.T000554 3 Pod number/plant Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_3089 NA 0 0 to Ca_Desi_SNP_3091 0 0 24.832 - 24.848 8.35 10.1038/srep09468 NA NA t3827.T000555 3 Pod number/plant Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_3157 NA 0 0 to Ca_Desi_SNP_3159 0 0 34.458 - 34.858 8.28 10.1038/srep09468 NA NA t3827.T000556 3 Pod number/plant Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_3230 NA 0 0 to Ca_Desi_SNP_3232 0 0 44.792 - 45.282 9.65 10.1038/srep09468 NA NA t3827.T000557 3 Pod number/plant Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_3269 NA 0 0 to Ca_Desi_SNP_3271 0 0 54.679 - 54.792 10.45 10.1038/srep09468 NA NA t3827.T000558 3 Pod number/plant Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_3555 NA 0 0 to Ca_Desi_SNP_3561 0 0 57.041 - 58.066 9.21 10.1038/srep09468 NA NA t3827.T000559 3 Pod number/plant Interval mapping ICC 6013 x ICC 7346 F4 CaSNP24 NA 0 0 CaSNP28 0 0 46.1 - 50.2 8.4 10.1038/srep11166 NA NA t3827.T000560 3 Pod number/plant Interval mapping ICC 6013 x ICC 7346 F4 CaSNP119 NA 0 0 CaSNP122 0 0 38.3 - 43.8 5.5 10.1038/srep11166 NA NA t3827.T000561 3 Pod number/plant Interval mapping ICC 6013 x ICC 7346 F4 CaSNP206 NA 0 0 CaSNP207 0 0 37.7 - 40.1 8 10.1038/srep11166 NA NA t3827.T000562 3 Pod number/plant Interval mapping ICC 6013 x ICC 7346 F4 CaSNP211 NA 0 0 CaSNP213 0 0 63.2 - 68.7 7.4 10.1038/srep11166 NA NA t3827.T000563 3 Pod number/plant Interval mapping ICC 6013 x ICC 7346 F4 CaSNP250 NA 0 0 CaSNP254 0 0 80.1 - 85.4 5.1 10.1038/srep11166 NA NA t3827.T000564 3 Pod number/plant Interval mapping ICC 6013 x ICC 7346 F4 CaSNP290 NA 0 0 CaSNP292 0 0 59.4 - 62.3 7.4 10.1038/srep11166 NA NA t3827.T000565 3 Pod number/plant, Seed number/plant GWAS, interval mapping 92 desi and kabuli accessions NA Desi- Sc-2103 15896 0 0 0 8.4 3.2 × 10-6, 1.1 10.1038/srep11166 NA NA t3827.T000566 3 Pod number/plant, Seed number/plant GWAS, interval mapping 92 desi and kabuli accessions NA Desi- Sc-2103 15914 0 0 0 2.6 × 10-6, 1.3 10.1038/srep11166 NA NA t3827.T000567 3 Pod number/plant, Seed number/plant GWAS, interval mapping 92 desi and kabuli accessions NA Desi- Sc-8364 45741 0 0 0 1.1 × 10-7, 2.2 10.1038/srep11166 NA NA t3827.T000568 3 Pod number/plant, Seed number/plant GWAS, interval mapping 92 desi and kabuli accessions NA Desi-Sc-289 150550 0 0 0 7.2 2.5 × 10-6, 3.4 10.1038/srep11166 NA NA t3827.T000569 3 Pod number/plant, Seed number/plant GWAS, interval mapping 92 desi and kabuli accessions NA Desi-Sc-330 3079 0 0 0 2.4 × 10-6, 8.2 10.1038/srep11166 NA NA t3827.T000570 3 Pod number/plant, Seed number/plant GWAS, interval mapping 92 desi and kabuli accessions NA Desi-Sc-994 225780 0 0 0 7.2 2.1 × 10-6, 8.5 10.1038/srep11166 NA NA t3827.T000571 3 Pod number/plant, Seed number/plant GWAS, interval mapping 92 desi and kabuli accessions NA Kabuli- Sc-1504 189681 0 0 0 8.4 2.5 × 10-6, 9.3 10.1038/srep11166 NA NA t3827.T000572 3 Pod number/plant, Seed number/plant GWAS, interval mapping 92 desi and kabuli accessions NA Kabuli-Chr5 16766270 0 0 0 9.7 1.1 × 10-7, 1.3 10.1038/srep11166 NA NA t3827.T000573 3 Pod number/plant, Seed number/plant GWAS, interval mapping 92 desi and kabuli accessions NA Kabuli-Chr8 16102414 0 0 0 7.4 2.9 × 10-6, 9.8 10.1038/srep11166 NA NA t3827.T000574 3 Pod number/plant, Seed number/plant GWAS, interval mapping 92 desi and kabuli accessions NA Kabuli-De novo 309293 0 0 0 9.7 2.4 × 10-6, 9 × 10.1038/srep11166 NA NA t3827.T000575 3 Pod number/plant, Seed number/plant Interval mapping ICC 6013 x ICC 7346 F4 CaSNP36 NA 0 0 CaSNP39 0 0 2.9 - 9.8 7.4 10.1038/srep11166 NA NA t3827.T000576 3 Pod number/plant, Seed number/plant Interval mapping ICC 6013 x ICC 7346 F4 CaSNP190 NA 0 0 CaSNP192 0 0 38.8 - 40.6 7.2 10.1038/srep11166 NA NA t3827.T000577 3 Pod number/plant, Seed number/plant Interval mapping ICC 6013 x ICC 7346 F4 CaSNP180 NA 0 0 CaSNP184 0 0 6.8 - 18.9 9.7 10.1038/srep11166 NA NA t3827.T000578 qPPP6.1 3 Pods per plant (PPP) composite interval mapping ICC 4958 X DCP 92-3 RIL population recombinant inbred line AX-123633331 NA 0 0 AX-123633450 0 0 0.75 - 1.27 6.8 10.1371/journal.pone.0251669 NA NA t3827.T000579 3 Pods/plant Interval mapping ICC 4958 × ICC 1882 RIL Ca4_16278671 NA 0 0 Ca4_15926160 0 0 0.8599999999999994 9.437568 10.1007/s00438-014-0932-3 NA NA t3827.T000580 3 Pods/plant Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13724666 NA 0 0 Ca4_11276225 0 0 1.051000000000002 13.780673 10.1007/s00438-014-0932-3 NA NA t3827.T000581 3 Pods/plant Interval mapping ICC 4958 × ICC 1882 RIL ICCM0065 NA 0 0 Ca4_13588956 0 0 2.3859999999999957 15.852334 10.1007/s00438-014-0932-3 NA NA t3827.T000582 3 Pods/plant Interval mapping ICC 4958 × ICC 1882 RIL ICCM0065 NA 0 0 Ca4_11276225 0 0 3.233000000000004 14.284473 10.1007/s00438-014-0932-3 NA NA t3827.T000583 3 Pods/plant Interval mapping ICC 4958 × ICC 1882 RIL STMS11 NA 0 0 CaM0615 0 0 3.798000000000002 6.790445 10.1007/s00438-014-0932-3 NA NA t3827.T000584 3 Pods/plant Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13687456 NA 0 0 TAA170 0 0 4.1640000000000015 18.792617 10.1007/s00438-014-0932-3 NA NA t3827.T000585 3 Pods/plant Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12982420 NA 0 0 TAA170 0 0 4.934999999999988 7.13355 10.1007/s00438-014-0932-3 NA NA t3827.T000586 3 Pods/plant Interval mapping ICC 4958 × ICC 1882 RIL Ca4_16149998 NA 0 0 ICCM0065 0 0 4.992000000000004 5.335505 10.1007/s00438-014-0932-3 NA NA t3827.T000587 3 Pods/plant Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13687456 NA 0 0 NCPGR21 0 0 5.13900000000001 9.489685 10.1007/s00438-014-0932-3 NA NA t3827.T000588 3 Pods/plant Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13840227 NA 0 0 NCPGR21 0 0 5.365000000000009 14.219327 10.1007/s00438-014-0932-3 NA NA t3827.T000589 qPPP8.1 3 PPP (pods number per plant) composite interval mapping RIL recombinant inbred line in F8 generation AX-123638292 NA 0 0 AX-123664233 0 0 36.06 3.3 10.3390/ijms21145058 NA NA t3827.T000590 3 Seed number Bi-parental analysis Segregants F2 M289_Ca1_37208111 NA 0 0 0 0 673 4.40754548052082 10.1002/tpg2.20408 NA NA t3827.T000591 3 Seed number Bi-parental analysis Segregants F2 M218_Ca1_14846227 NA 0 0 0 0 887.864 5.71698103072068 10.1002/tpg2.20408 NA NA t3827.T000592 3 Seed number Bi-parental analysis Segregants F2 M313_Ca2_12022267 NA 0 0 0 0 535.383 4.17456630347797 10.1002/tpg2.20408 NA NA t3827.T000593 3 Seed number Bi-parental analysis Segregants F2 M615_Ca3_38183517 NA 0 0 0 0 172 7.16053020596044 10.1002/tpg2.20408 NA NA t3827.T000594 3 Seed number Bi-parental analysis Segregants F2 M688_Ca3_34975027 NA 0 0 0 0 554.718 4.21792740950153 10.1002/tpg2.20408 NA NA t3827.T000595 3 Seed number Bi-parental analysis Segregants F2 NA 0 0 0 0 1163.596 4.49357148200071 10.1002/tpg2.20408 NA NA t3827.T000596 3 Seed number Bi-parental analysis Segregants F2 M1946_Ca6_14394714 NA 0 0 0 0 1119.144 4.18981152156691 10.1002/tpg2.20408 NA NA t3827.T000597 3 Seed number Bi-parental analysis Segregants F2 M1664_Ca5_50726507 NA 0 0 0 0 35 5.20364644225294 10.1002/tpg2.20408 NA NA t3827.T000598 3 Seed number Bi-parental analysis Segregants F2 M1779_Ca6_3147711 NA 0 0 0 0 493.705 4.1247160616085 10.1002/tpg2.20408 NA NA t3827.T000599 3 Seed number Bi-parental analysis Segregants F2 M3127__0 NA 0 0 0 0 11.452 5.5159654808394 10.1002/tpg2.20408 NA NA t3827.T000600 3 Seed number Bi-parental analysis Segregants F2 M2782_Ca8_9396515 NA 0 0 0 0 53.045 5.29601232197757 10.1002/tpg2.20408 NA NA t3827.T000601 3 Seed number Bi-parental analysis Segregants F2 M5150_Ca6_64310773 NA 0 0 0 0 669.879 4.14584920139567 10.1002/tpg2.20408 NA NA t3827.T000602 3 Seed number GWAS FarmCPU Segregants F2 NA 10408238 0 0 0 0 3.26160992527517 10.1002/tpg2.20408 NA NA t3827.T000603 3 Seed number GWAS FarmCPU Segregants F2 NA 14257697 0 0 0 0 4.07626939554625 10.1002/tpg2.20408 NA NA t3827.T000604 3 Seed number GWAS FarmCPU Segregants F2 NA 17444963 0 0 0 0 4.2105047844806e 10.1002/tpg2.20408 NA NA t3827.T000605 3 Seed number GWAS FarmCPU Segregants F2 NA 1796847 0 0 0 0 1.07070035482054 10.1002/tpg2.20408 NA NA t3827.T000606 3 Seed number GWAS FarmCPU Segregants F2 NA 20565313 0 0 0 0 4.08842148696149 10.1002/tpg2.20408 NA NA t3827.T000607 3 Seed number GWAS FarmCPU Segregants F2 NA 3018855 0 0 0 0 1.58186273289286 10.1002/tpg2.20408 NA NA t3827.T000608 3 Seed number GWAS FarmCPU Segregants F2 NA 3133265 0 0 0 0 1.95201876889914 10.1002/tpg2.20408 NA NA t3827.T000609 3 Seed number GWAS FarmCPU Segregants F2 NA 32746194 0 0 0 0 1.04788253177545 10.1002/tpg2.20408 NA NA t3827.T000610 3 Seed number GWAS FarmCPU Segregants F2 NA 3432736 0 0 0 0 1.24882218892676 10.1002/tpg2.20408 NA NA t3827.T000611 3 Seed number GWAS FarmCPU Segregants F2 NA 35370992 0 0 0 0 5.34737124333588 10.1002/tpg2.20408 NA NA t3827.T000612 3 Seed number GWAS FarmCPU Segregants F2 NA 37663137 0 0 0 0 8.03882894717814 10.1002/tpg2.20408 NA NA t3827.T000613 3 Seed number GWAS FarmCPU Segregants F2 NA 38759980 0 0 0 0 6.24841969747899 10.1002/tpg2.20408 NA NA t3827.T000614 3 Seed number GWAS FarmCPU Segregants F2 NA 47627785 0 0 0 0 1.43473914699869 10.1002/tpg2.20408 NA NA t3827.T000615 3 Seed number GWAS FarmCPU Segregants F2 NA 50906753 0 0 0 0 8.84353423641833 10.1002/tpg2.20408 NA NA t3827.T000616 3 Seed number GWAS FarmCPU Segregants F2 NA 51146984 0 0 0 0 1.68184047197338 10.1002/tpg2.20408 NA NA t3827.T000617 3 Seed number GWAS FarmCPU Segregants F2 NA 5856000 0 0 0 0 8.58565787754049 10.1002/tpg2.20408 NA NA t3827.T000618 3 Seed number GWAS FarmCPU Segregants F2 NA 7767059 0 0 0 0 9.59173337355432 10.1002/tpg2.20408 NA NA t3827.T000619 3 Seed number GWAS FarmCPU Segregants F2 NA 9278085 0 0 0 0 1.02098845147021 10.1002/tpg2.20408 NA NA t3827.T000620 3 Seed number GWAS FarmCPU Segregants F2 NA 9687371 0 0 0 0 1.12940626717103 10.1002/tpg2.20408 NA NA t3827.T000621 3 Seed number Interval mapping ICCV 2 × JG 11 F8 CaM2031 NA 0 0 CKAM0165 0 0 15.91 2.63 10.1186/s12870-015-0491-8 NA NA t3827.T000622 3 Seed number Interval mapping ICCV 2 × JG 11 F8 CKAM0993 NA 0 0 CKAM1317 0 0 74.61 4.04 10.1186/s12870-015-0491-8 NA NA t3827.T000623 conSNqtl.1 3 Seed number whole genome average interval ma Rupali/Genesis836 population recombinant inbred line DArT1046 NA CaLG07 0 0 DArT1204(C) 0 0 40.32 - 43.73 4.0558 10.3389/fpls.2021.667910 NA NA t3827.T000624 conSNqtl.2 3 Seed number whole genome average interval ma Rupali/Genesis836 population recombinant inbred line SNP14_C14_12_74(C) NA CaLG04 0 0 SNP15_C14_13_06 0 0 71.61 - 72.17 3.5923 10.3389/fpls.2021.667910 NA NA t3827.T000625 conSNqtl.3 3 Seed number whole genome average interval ma Rupali/Genesis836 population recombinant inbred line SNP14_C14_12_74(C) NA CaLG04 0 0 SNP15_C14_13_06 0 0 71.61 - 72.17 6.5191 10.3389/fpls.2021.667910 NA NA t3827.T000626 conSNqtl.4 3 Seed number whole genome average interval ma Rupali/Genesis836 population recombinant inbred line SNP202(C) NA CaLG04 0 0 DArT1740(C) 0 0 93.61 - 103.27 4.0847 10.3389/fpls.2021.667910 NA NA t3827.T000627 conSNqtl.5 3 Seed number whole genome average interval ma Rupali/Genesis836 population recombinant inbred line DArT1753 NA CaLG08 0 0 SNP393(C) 0 0 48.59 - 55.61 3.776 10.3389/fpls.2021.667910 NA NA t3827.T000628 salSNqtl.1 3 Seed number whole genome average interval ma Rupali/Genesis836 population recombinant inbred line SNP201 NA CaLG04 0 0 SNP2_Ca4_75 0 0 27.87 - 29.89 9.0112 10.3389/fpls.2021.667910 NA NA t3827.T000629 salSNqtl.2 3 Seed number whole genome average interval ma Rupali/Genesis836 population recombinant inbred line DArT417 NA CaLG04 0 0 SNP203 0 0 88.95 - 90.37 7.5854 10.3389/fpls.2021.667910 NA NA t3827.T000630 salSNqtl.3 3 Seed number whole genome average interval ma Rupali/Genesis836 population recombinant inbred line DArT71 NA CaLG01 0 0 DArT1751 0 0 0 - 10.48 3.3289 10.3389/fpls.2021.667910 NA NA t3827.T000631 saltolSNqtl.1 3 Seed number QTL analysis using residuals Rupali/Genesis836 population recombinant inbred line SNP201 NA CaLG04 0 0 SNP2_Ca4_75 0 0 27.87 - 29.89 5.616 10.3389/fpls.2021.667910 NA NA t3827.T000632 saltolSNqtl.2 3 Seed number QTL analysis using residuals Rupali/Genesis836 population recombinant inbred line SNP262 NA CaLG06 0 0 SNP278 0 0 118.47 - 127.29 3.3706 10.3389/fpls.2021.667910 NA NA t3827.T000633 3 Seed number/plant GWAS, interval mapping 92 desi and kabuli accessions NA Kabuli-Chr4 38343633 0 0 0 7.8 5.5 × 10-5 10.1038/srep11166 NA NA t3827.T000634 3 Seed number/plant Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_486 NA 0 0 to Ca_Desi_SNP_488 0 0 54.514 - 54.597 10.95 10.1038/srep09468 NA NA t3827.T000635 3 Seed number/plant Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_902 NA 0 0 to Ca_Desi_SNP_904 0 0 39.18 - 39.252 8.42 10.1038/srep09468 NA NA t3827.T000636 3 Seed number/plant Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_1113 NA 0 0 to Ca_Desi_SNP_1115 0 0 80.057 - 81.06 10.72 10.1038/srep09468 NA NA t3827.T000637 3 Seed number/plant Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_752 NA 0 0 to Ca_Desi_SNP_754 0 0 9.224 - 10.101 8.91 10.1038/srep09468 NA NA t3827.T000638 3 Seed number/plant Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_2336 NA 0 0 to Ca_Desi_SNP_2338 0 0 23.792 - 24.875 12.6 10.1038/srep09468 NA NA t3827.T000639 3 Seed number/plant Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_2557 NA 0 0 to Ca_Desi_SNP_2559 0 0 76.802 - 77.188 10.5 10.1038/srep09468 NA NA t3827.T000640 3 Seed number/plant Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_3394 NA 0 0 to Ca_Desi_SNP_3396 0 0 20.582 - 21.005 7.44 10.1038/srep09468 NA NA t3827.T000641 3 Seed number/plant Interval mapping ICC 12299 × ICC 8261 F7 Ca_Desi_SNP_3536 NA 0 0 to Ca_Desi_SNP_3538 0 0 54.055 - 54.218 8.45 10.1038/srep09468 NA NA t3827.T000642 3 Seed number/plant Interval mapping ICC 6013 x ICC 7346 F4 CaSNP90 NA 0 0 CaSNP93 0 0 97.8 - 100.2 5.2 10.1038/srep11166 NA NA t3827.T000643 3 Seed number/plant Interval mapping ICC 6013 x ICC 7346 F4 CaSNP152 NA 0 0 CaSNP163 0 0 105.1 - 108.7 7.8 10.1038/srep11166 NA NA t3827.T000644 3 Seed weight Interval mapping ICC 4958 × ICC 12968 F4 Ca-IISNP151 NA 0 0 Ca-IISNP154 0 0 169.1 - 171.3 13.8, 12.6 10.1038/srep09264 NA NA t3827.T000645 3 Seed weight Interval mapping ICC 4958 × ICC 12968 F4 Ca-IISSR55 NA 0 0 Ca-IISSR25 0 0 196.5 - 199.5 8.5 10.1038/srep09264 NA NA t3827.T000646 3 Seed weight Interval mapping ICC 4958 × ICC 12968 F4 Ca-IISNP186 NA 0 0 Ca-IISSR56 0 0 202.6 - 204.9 9.5, 8.7 10.1038/srep09264 NA NA t3827.T000647 3 Seed weight Interval mapping ICC 4958 × ICC 12968 F4 Ca-IISNP234 NA 0 0 Ca-IISNP238 0 0 44.2 - 47.6 7.6, 7 10.1038/srep09264 NA NA t3827.T000648 3 Seed weight Interval mapping ICC 4958 × ICC 12968 F4 Ca-IISNP465 NA 0 0 Ca-IISNP468 0 0 115.6 - 118.5 7.2 10.1038/srep09264 NA NA t3827.T000649 3 Seed weight Interval mapping ICC 4958 × ICC 12968 F4 Ca-IISNP749 NA 0 0 Ca-IISNP752 0 0 275.3 - 278.8 6.9, 6.5 10.1038/srep09264 NA NA t3827.T000650 3 Seed weight Interval mapping ICC 4958 × ICC 12968 F4 Ca-IISNP579 NA 0 0 Ca-IISNP581 0 0 3.3 - 5.8 8.5, 7.8 10.1038/srep09264 NA NA t3827.T000651 3 Seed weight Interval mapping ICC 4958 × ICC 12968 F4 Ca-IISNP972 NA 0 0 Ca-IISNP975 0 0 13.2 - 16 4.7 10.1038/srep09264 NA NA t3827.T000652 3 Seed weight Interval mapping ICC 4958 × ICC 2263 F7 CaILP0644 NA LG1 14581851 0 0 0 35.73 10 10.1016/j.plantsci.2016.08.013 NA NA t3827.T000653 3 Seed weight Interval mapping ICC 4958 × ICC 2263 F7 CaILP0488 NA LG1 7950391 0 0 0 19.48 9.8 10.1016/j.plantsci.2016.08.013 NA NA t3827.T000654 3 Seed weight Interval mapping ICC 4958 × ICC 2263 F7 CaILP1369 NA LG2 32257214 0 0 0 77.09 8.7 10.1016/j.plantsci.2016.08.013 NA NA t3827.T000655 3 Seed weight Interval mapping ICC 4958 × ICC 2263 F7 CaILP1632 NA LG3 15424043 0 0 0 35.01 10.5 10.1016/j.plantsci.2016.08.013 NA NA t3827.T000656 3 Seed weight Interval mapping ICC 4958 × ICC 2263 F7 CaILP2689 NA LG4 16532811 0 0 0 65.63 8.5 10.1016/j.plantsci.2016.08.013 NA NA t3827.T000657 3 Seed weight Interval mapping ICC 4958 × ICC 2263 F7 CaILP5359 NA LG6 24522143 0 0 0 35.56 7.6 10.1016/j.plantsci.2016.08.013 NA NA t3827.T000658 3 Seed weight Interval mapping ICC 7184 × ICC 15061 F4 CaSNP7 NA 0 0 CaSNP12 0 0 3.7 - 5.5 19.7 10.1093/dnares/dsv004 NA NA t3827.T000659 3 Seed weight Interval mapping ICC 7184 × ICC 15061 F4 CaSNP50 NA 0 0 CaSNP55 0 0 52.6 - 60.2 5.4 10.1093/dnares/dsv004 NA NA t3827.T000660 3 Seed weight Interval mapping SBD377 × BGD112 F11 NCPGR199 NA 0 0 NCPGR202 0 0 16.429 2.639 10.1007/s11033-015-3925-3 NA NA t3827.T000661 3 Seed weight Interval mapping SBD377 × BGD112 F11 CEST47 NA 0 0 NCPGR34 0 0 9.977 2.745 10.1007/s11033-015-3925-3 NA NA t3827.T000662 3 Seed weight QTL-seq ICC 7184 × ICC 15061 F4 CaSNP8 NA Chr1 836859 0 CaSNP10 872247 0 10.1093/dnares/dsv004 NA NA t3827.T000663 conSYqtl.1 3 Seed yield whole genome average interval ma Rupali/Genesis836 population recombinant inbred line DArT523 NA CaLG05 0 0 DArT1040 0 0 126.94 - 137.75 4.1562 10.3389/fpls.2021.667910 NA NA t3827.T000664 conSYqtl.2 3 Seed yield whole genome average interval ma Rupali/Genesis836 population recombinant inbred line DArT419 NA CaLG04 0 0 DArT417 0 0 88.67 - 88.95 3.0544 10.3389/fpls.2021.667910 NA NA t3827.T000665 conSYqtl.3 3 Seed yield whole genome average interval ma Rupali/Genesis836 population recombinant inbred line DArT63(C) NA CaLG01 0 0 SNP24(C) 0 0 24.06 - 26.68 4.0241 10.3389/fpls.2021.667910 NA NA t3827.T000666 salSYqtl.1 3 Seed yield whole genome average interval ma Rupali/Genesis836 population recombinant inbred line DArT595 NA CaLG05 0 0 DArT553 0 0 97.52 - 111.41 4.3667 10.3389/fpls.2021.667910 NA NA t3827.T000667 salSYqtl.2 3 Seed yield whole genome average interval ma Rupali/Genesis836 population recombinant inbred line SNP201 NA CaLG04 0 0 SNP2_Ca4_75 0 0 27.87 - 29.89 5.1227 10.3389/fpls.2021.667910 NA NA t3827.T000668 salSYqtl.3 3 Seed yield whole genome average interval ma Rupali/Genesis836 population recombinant inbred line SNP246 NA CaLG06 0 0 SNP259(C) 0 0 131 - 133.94 3.5456 10.3389/fpls.2021.667910 NA NA t3827.T000669 saltolSYqtl.1 3 Seed yield QTL analysis using residuals Rupali/Genesis836 population recombinant inbred line DArT595 NA CaLG05 0 0 DArT553 0 0 97.52 - 111.41 4.4936 10.3389/fpls.2021.667910 NA NA t3827.T000670 saltolSYqtl.2 3 Seed yield QTL analysis using residuals Rupali/Genesis836 population recombinant inbred line SNP201 NA CaLG04 0 0 SNP2_Ca4_75 0 0 27.87 - 29.89 4.9432 10.3389/fpls.2021.667910 NA NA t3827.T000671 MTA_at_H5G12 3 Seed yield per plant (SYPP) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet H5G12 NA 0 0 0 0 0.00563 33707355 NA NA t3827.T000672 MTA_at_ICCM0297 3 Seed yield per plant (SYPP) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet ICCM0297 NA 0 0 0 0 0.00241 33707355 NA NA t3827.T000673 MTA_at_NCPGR156 3 Seed yield per plant (SYPP) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR156 NA 0 0 0 0 0.00324 33707355 NA NA t3827.T000674 MTA_at_NCPGR200 3 Seed yield per plant (SYPP) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR200 NA 0 0 0 0 0.0047 33707355 NA NA t3827.T000675 MTA_at_NCPGR249 3 Seed yield per plant (SYPP) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR249 NA 0 0 0 0 0.00819 33707355 NA NA t3827.T000676 MTA_at_STMS21 3 Seed yield per plant (SYPP) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet STMS21 NA 0 0 0 0 0.00844 33707355 NA NA t3827.T000677 MTA_at_TA8 3 Seed yield per plant (SYPP) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet TA8 NA 0 0 0 0 0.00711 33707355 NA NA t3827.T000678 CaSYPP_LS2.1 3 Seed yield/plant composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA2_22704770 NA 0 0 SCA2_35770691 0 0 22.51 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000679 CaSYPP_LS6.1 3 Seed yield/plant composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA6_35796441 NA 0 0 SCA6_2512179 0 0 12.21 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000680 CaSYPP_NS6.2 3 Seed yield/plant composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA6_9908036 NA 0 0 SCA6_10234443 0 0 52.31 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000681 CaSYPP_NS6.3 3 Seed yield/plant composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA6_9993257 NA 0 0 SCA6_9908036 0 0 53.01 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000682 3 Seeds/pod Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12558541 NA 0 0 Ca4_11276225 0 0 1.8120000000000118 31.13355 10.1007/s00438-014-0932-3 NA NA t3827.T000683 3 Seeds/pod Interval mapping ICC 4958 × ICC 1882 RIL Ca4_16149998 NA 0 0 ICCM0249 0 0 3.1539999999999964 14.712269 10.1007/s00438-014-0932-3 NA NA t3827.T000684 3 Seeds/pod Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13840227 NA 0 0 TAA170 0 0 4.390000000000001 25.255157 10.1007/s00438-014-0932-3 NA NA t3827.T000685 3 Seeds/pod Interval mapping ICC 4958 × ICC 1882 RIL STMS11 NA 0 0 CaM0845 0 0 4.961000000000013 7.268187 10.1007/s00438-014-0932-3 NA NA t3827.T000686 qSSI100SW2.1 3 SSI_100SW (stress suceptibility index (SSI) for 100 seed weight) composite interval mapping RIL recombinant inbred line in F8 generation AX-123659415 NA 0 0 AX-123620733 0 0 62.91 3.7 10.3390/ijms21145058 NA NA t3827.T000687 qSSI100SW3.1 3 SSI_100SW (stress suceptibility index (SSI) for 100 seed weight) composite interval mapping RIL recombinant inbred line in F8 generation AX-123659975 NA 0 0 AX-123622699 0 0 50.79 4.6 10.3390/ijms21145058 NA NA t3827.T000688 qSSIYP3.1 3 SSI_YP (stress suceptibility index (SSI) for yield per plant) composite interval mapping RIL recombinant inbred line in F8 generation AX-123659975 NA 0 0 AX-123622699 0 0 50.79 5.3 10.3390/ijms21145058 NA NA t3827.T000689 qSSIYP6.1 3 SSI_YP (stress suceptibility index (SSI) for yield per plant) composite interval mapping RIL recombinant inbred line in F8 generation AX-123640392 NA 0 0 AX-123640389 0 0 226.1 4.8 10.3390/ijms21145058 NA NA t3827.T000690 qSSIYP6.1 3 SSI_YP (stress suceptibility index (SSI) for yield per plant) composite interval mapping RIL recombinant inbred line in F8 generation AX-123640392 NA 0 0 AX-123640389 0 0 226.1 5.7 10.3390/ijms21145058 NA NA t3827.T000691 qSSIYP6.2 3 SSI_YP (stress suceptibility index (SSI) for yield per plant) composite interval mapping RIL recombinant inbred line in F8 generation AX-123635094 NA 0 0 AX-123635091 0 0 260.98 3.8 10.3390/ijms21145058 NA NA t3827.T000692 3 Stem + leaf weight Interval mapping ICCV 2 × JG 11 F8 CaM0463 NA 0 0 ICCM272 0 0 72.31 3.72 10.1186/s12870-015-0491-8 NA NA t3827.T000693 3 Stem +leaf weight Interval mapping ICCV 2 × JG 11 F8 CaM0463 NA 0 0 ICCM272 0 0 71.31 3.04 10.1186/s12870-015-0491-8 NA NA t3827.T000694 qSTI100SW3.1 3 STI_100SW (stress tolerance index (STI) for 100 seed weight) composite interval mapping RIL recombinant inbred line in F8 generation AX-123659975 NA 0 0 AX-123622699 0 0 50.79 8.7 10.3390/ijms21145058 NA NA t3827.T000695 qSTIYP5.1 3 STI_YP (stress tolerance index (STI) for yield per plant) composite interval mapping RIL recombinant inbred line in F8 generation AX-123653399 NA 0 0 AX-123653409 0 0 20.31 4.8 10.3390/ijms21145058 NA NA t3827.T000696 qSTIYP6.1 3 STI_YP (stress tolerance index (STI) for yield per plant) composite interval mapping RIL recombinant inbred line in F8 generation AX-123640437 NA 0 0 AX-123655585 0 0 268.65 4.3 10.3390/ijms21145058 NA NA t3827.T000697 QTL_aha10_Ca3_23262576 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line aha10(Ca3:23262576) NA 0 0 0 0 1.06652980466855 10.1007/s00122-019-03277-5 NA NA t3827.T000698 QTL_AN3 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line AN3 NA 0 0 0 0 2.56257827178653 10.1007/s00122-019-03277-5 NA NA t3827.T000699 QTL_Ca3_19821186 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca3_19821186 NA 0 0 0 0 4.63809529025181 10.1007/s00122-019-03277-5 NA NA t3827.T000700 QTL_Ca3_19853745 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca3_19853745 NA 0 0 0 0 4.18604151290157 10.1007/s00122-019-03277-5 NA NA t3827.T000701 QTL_Ca3_19853805 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca3_19853805 NA 0 0 0 0 4.18604151290157 10.1007/s00122-019-03277-5 NA NA t3827.T000702 QTL_Ca3_19908491 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca3_19908491 NA 0 0 0 0 4.26691149673486 10.1007/s00122-019-03277-5 NA NA t3827.T000703 QTL_Ca3_19908527 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca3_19908527 NA 0 0 0 0 7.8220395937999e 10.1007/s00122-019-03277-5 NA NA t3827.T000704 QTL_Ca3_19921595 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca3_19921595 NA 0 0 0 0 6.62672818611449 10.1007/s00122-019-03277-5 NA NA t3827.T000705 QTL_Ca3_19921611 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca3_19921611 NA 0 0 0 0 9.34804290853895 10.1007/s00122-019-03277-5 NA NA t3827.T000706 QTL_Ca3_20045543 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca3_20045543 NA 0 0 0 0 5.71640523646883 10.1007/s00122-019-03277-5 NA NA t3827.T000707 QTL_Ca3_20122534 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca3_20122534 NA 0 0 0 0 1.06608277593051 10.1007/s00122-019-03277-5 NA NA t3827.T000708 QTL_Ca3_20177050 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca3_20177050 NA 0 0 0 0 8.97212800854607 10.1007/s00122-019-03277-5 NA NA t3827.T000709 QTL_Ca3_20177055 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca3_20177055 NA 0 0 0 0 3.078501886678e- 10.1007/s00122-019-03277-5 NA NA t3827.T000710 QTL_Ca3_21283920 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca3_21283920 NA 0 0 0 0 1.03578383322081 10.1007/s00122-019-03277-5 NA NA t3827.T000711 QTL_Ca3_21283925 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca3_21283925 NA 0 0 0 0 5.21402375038196 10.1007/s00122-019-03277-5 NA NA t3827.T000712 QTL_Ca3_21283949 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca3_21283949 NA 0 0 0 0 3.40889950727422 10.1007/s00122-019-03277-5 NA NA t3827.T000713 QTL_Ca3_21706963 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca3_21706963 NA 0 0 0 0 5.18564652564309 10.1007/s00122-019-03277-5 NA NA t3827.T000714 QTL_Ca3_21706964 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca3_21706964 NA 0 0 0 0 5.18564652564295 10.1007/s00122-019-03277-5 NA NA t3827.T000715 QTL_Ca3_21758600 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca3_21758600 NA 0 0 0 0 4.31563013425385 10.1007/s00122-019-03277-5 NA NA t3827.T000716 QTL_Ca3_21775854 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca3_21775854 NA 0 0 0 0 6.84634244622383 10.1007/s00122-019-03277-5 NA NA t3827.T000717 QTL_Ca3_21777546 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca3_21777546 NA 0 0 0 0 5.78468377753487 10.1007/s00122-019-03277-5 NA NA t3827.T000718 QTL_Ca3_21777560 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca3_21777560 NA 0 0 0 0 5.35676453322175 10.1007/s00122-019-03277-5 NA NA t3827.T000719 QTL_Ca3_21783183 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca3_21783183 NA 0 0 0 0 5.73840381806075 10.1007/s00122-019-03277-5 NA NA t3827.T000720 QTL_Ca3_21806637 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca3_21806637 NA 0 0 0 0 2.91867358284865 10.1007/s00122-019-03277-5 NA NA t3827.T000721 QTL_Ca3_22724462 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca3_22724462 NA 0 0 0 0 7.3196558792471e 10.1007/s00122-019-03277-5 NA NA t3827.T000722 QTL_Ca3_36503423 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca3_36503423 NA 0 0 0 0 5.97637462548723 10.1007/s00122-019-03277-5 NA NA t3827.T000723 QTL_Ca4_48194938 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca4_48194938 NA 0 0 0 0 2.27829560029239 10.1007/s00122-019-03277-5 NA NA t3827.T000724 QTL_Ca4_48359533 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca4_48359533 NA 0 0 0 0 4.13417096812796 10.1007/s00122-019-03277-5 NA NA t3827.T000725 QTL_Ca4_48397919 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca4_48397919 NA 0 0 0 0 2.66486228808697 10.1007/s00122-019-03277-5 NA NA t3827.T000726 QTL_Ca4_48397941 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca4_48397941 NA 0 0 0 0 4.55252521180338 10.1007/s00122-019-03277-5 NA NA t3827.T000727 QTL_Ca4_48397955 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca4_48397955 NA 0 0 0 0 3.83201205502915 10.1007/s00122-019-03277-5 NA NA t3827.T000728 QTL_Ca4_48397982 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca4_48397982 NA 0 0 0 0 5.00930609055718 10.1007/s00122-019-03277-5 NA NA t3827.T000729 QTL_Ca4_48397984 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca4_48397984 NA 0 0 0 0 3.88509004405047 10.1007/s00122-019-03277-5 NA NA t3827.T000730 QTL_Ca4_48397999 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca4_48397999 NA 0 0 0 0 3.83413289755686 10.1007/s00122-019-03277-5 NA NA t3827.T000731 QTL_Ca4_48398025 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca4_48398025 NA 0 0 0 0 5.74556927753768 10.1007/s00122-019-03277-5 NA NA t3827.T000732 QTL_Ca4_48398044 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca4_48398044 NA 0 0 0 0 1.58493071748157 10.1007/s00122-019-03277-5 NA NA t3827.T000733 QTL_Ca4_48584010 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca4_48584010 NA 0 0 0 0 1.50971407730479 10.1007/s00122-019-03277-5 NA NA t3827.T000734 QTL_Ca4_49869828 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca4_49869828 NA 0 0 0 0 4.92522595664765 10.1007/s00122-019-03277-5 NA NA t3827.T000735 QTL_Ca4_49869917 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca4_49869917 NA 0 0 0 0 1.49922570731069 10.1007/s00122-019-03277-5 NA NA t3827.T000736 QTL_Ca4_49869952 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca4_49869952 NA 0 0 0 0 1.15174846980506 10.1007/s00122-019-03277-5 NA NA t3827.T000737 QTL_Ca5_14763316 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Ca5_14763316 NA 0 0 0 0 5.46976470897755 10.1007/s00122-019-03277-5 NA NA t3827.T000738 QTL_CaGM13632_Ca3_23246513 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line CaGM13632(Ca3:23246513) NA 0 0 0 0 1.06652980466855 10.1007/s00122-019-03277-5 NA NA t3827.T000739 QTL_CaGM13641_Ca3_23312509 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line CaGM13641(Ca3:23312509) NA 0 0 0 0 3.15167331701724 10.1007/s00122-019-03277-5 NA NA t3827.T000740 QTL_Scaffold8586_900 3 SW_ABE (100-seed weight_Aberdeen) GLM model RIL recombinant inbred line Scaffold8586_900 NA 0 0 0 0 3.40844443372589 10.1007/s00122-019-03277-5 NA NA t3827.T000741 QTL_aha10_Ca3_23262576 3 SW_BIG (100-seed weight_Biggar) GLM model RIL recombinant inbred line aha10(Ca3:23262576) NA 0 0 0 0 6.93648533219682 10.1007/s00122-019-03277-5 NA NA t3827.T000742 QTL_AN3 3 SW_BIG (100-seed weight_Biggar) GLM model RIL recombinant inbred line AN3 NA 0 0 0 0 7.93433371830434 10.1007/s00122-019-03277-5 NA NA t3827.T000743 QTL_Ca3_19821186 3 SW_BIG (100-seed weight_Biggar) GLM model RIL recombinant inbred line Ca3_19821186 NA 0 0 0 0 9.56826604668068 10.1007/s00122-019-03277-5 NA NA t3827.T000744 QTL_Ca3_19908491 3 SW_BIG (100-seed weight_Biggar) GLM model RIL recombinant inbred line Ca3_19908491 NA 0 0 0 0 8.98218281390464 10.1007/s00122-019-03277-5 NA NA t3827.T000745 QTL_Ca3_19908527 3 SW_BIG (100-seed weight_Biggar) GLM model RIL recombinant inbred line Ca3_19908527 NA 0 0 0 0 5.01469394940379 10.1007/s00122-019-03277-5 NA NA t3827.T000746 QTL_Ca3_20177050 3 SW_BIG (100-seed weight_Biggar) GLM model RIL recombinant inbred line Ca3_20177050 NA 0 0 0 0 2.86143637478469 10.1007/s00122-019-03277-5 NA NA t3827.T000747 QTL_Ca3_21283920 3 SW_BIG (100-seed weight_Biggar) GLM model RIL recombinant inbred line Ca3_21283920 NA 0 0 0 0 3.15416372866565 10.1007/s00122-019-03277-5 NA NA t3827.T000748 QTL_Ca3_21283925 3 SW_BIG (100-seed weight_Biggar) GLM model RIL recombinant inbred line Ca3_21283925 NA 0 0 0 0 2.60828075273021 10.1007/s00122-019-03277-5 NA NA t3827.T000749 QTL_Ca3_21283949 3 SW_BIG (100-seed weight_Biggar) GLM model RIL recombinant inbred line Ca3_21283949 NA 0 0 0 0 6.16152579979983 10.1007/s00122-019-03277-5 NA NA t3827.T000750 QTL_Ca3_21706963 3 SW_BIG (100-seed weight_Biggar) GLM model RIL recombinant inbred line Ca3_21706963 NA 0 0 0 0 1.01889225894104 10.1007/s00122-019-03277-5 NA NA t3827.T000751 QTL_Ca3_21706964 3 SW_BIG (100-seed weight_Biggar) GLM model RIL recombinant inbred line Ca3_21706964 NA 0 0 0 0 1.01889225894106 10.1007/s00122-019-03277-5 NA NA t3827.T000752 QTL_Ca3_21758600 3 SW_BIG (100-seed weight_Biggar) GLM model RIL recombinant inbred line Ca3_21758600 NA 0 0 0 0 6.18188463716207 10.1007/s00122-019-03277-5 NA NA t3827.T000753 QTL_Ca3_21775854 3 SW_BIG (100-seed weight_Biggar) GLM model RIL recombinant inbred line Ca3_21775854 NA 0 0 0 0 2.18033095573983 10.1007/s00122-019-03277-5 NA NA t3827.T000754 QTL_Ca3_21777546 3 SW_BIG (100-seed weight_Biggar) GLM model RIL recombinant inbred line Ca3_21777546 NA 0 0 0 0 1.42445785453688 10.1007/s00122-019-03277-5 NA NA t3827.T000755 QTL_Ca3_21777560 3 SW_BIG (100-seed weight_Biggar) GLM model RIL recombinant inbred line Ca3_21777560 NA 0 0 0 0 6.95517970815443 10.1007/s00122-019-03277-5 NA NA t3827.T000756 QTL_Ca3_21783183 3 SW_BIG (100-seed weight_Biggar) GLM model RIL recombinant inbred line Ca3_21783183 NA 0 0 0 0 9.71097648507325 10.1007/s00122-019-03277-5 NA NA t3827.T000757 QTL_Ca3_21806637 3 SW_BIG (100-seed weight_Biggar) GLM model RIL recombinant inbred line Ca3_21806637 NA 0 0 0 0 2.31952736169222 10.1007/s00122-019-03277-5 NA NA t3827.T000758 QTL_Ca3_22724462 3 SW_BIG (100-seed weight_Biggar) GLM model RIL recombinant inbred line Ca3_22724462 NA 0 0 0 0 5.85735530252833 10.1007/s00122-019-03277-5 NA NA t3827.T000759 QTL_Ca4_48397919 3 SW_BIG (100-seed weight_Biggar) GLM model RIL recombinant inbred line Ca4_48397919 NA 0 0 0 0 6.96760743150881 10.1007/s00122-019-03277-5 NA NA t3827.T000760 QTL_CaGM13632_Ca3_23246513 3 SW_BIG (100-seed weight_Biggar) GLM model RIL recombinant inbred line CaGM13632(Ca3:23246513) NA 0 0 0 0 6.93648533219682 10.1007/s00122-019-03277-5 NA NA t3827.T000761 QTL_CaGM13641_Ca3_23312509 3 SW_BIG (100-seed weight_Biggar) GLM model RIL recombinant inbred line CaGM13641(Ca3:23312509) NA 0 0 0 0 6.13435368236166 10.1007/s00122-019-03277-5 NA NA t3827.T000762 QTL_Scaffold8586_900 3 SW_BIG (100-seed weight_Biggar) GLM model RIL recombinant inbred line Scaffold8586_900 NA 0 0 0 0 2.68611423024775 10.1007/s00122-019-03277-5 NA NA t3827.T000763 QTL_aha10_Ca3_23262576 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line aha10(Ca3:23262576) NA 0 0 0 0 1.57588405823348 10.1007/s00122-019-03277-5 NA NA t3827.T000764 QTL_AN3 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line AN3 NA 0 0 0 0 2.40665463188872 10.1007/s00122-019-03277-5 NA NA t3827.T000765 QTL_Ca3_18996437 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line Ca3_18996437 NA 0 0 0 0 4.9380051239714e 10.1007/s00122-019-03277-5 NA NA t3827.T000766 QTL_Ca3_19821186 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line Ca3_19821186 NA 0 0 0 0 5.85008301532119 10.1007/s00122-019-03277-5 NA NA t3827.T000767 QTL_Ca3_19853745 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line Ca3_19853745 NA 0 0 0 0 6.2567982658714e 10.1007/s00122-019-03277-5 NA NA t3827.T000768 QTL_Ca3_19853805 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line Ca3_19853805 NA 0 0 0 0 6.2567982658714e 10.1007/s00122-019-03277-5 NA NA t3827.T000769 QTL_Ca3_19908491 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line Ca3_19908491 NA 0 0 0 0 1.98423281134909 10.1007/s00122-019-03277-5 NA NA t3827.T000770 QTL_Ca3_19908527 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line Ca3_19908527 NA 0 0 0 0 4.31097901526841 10.1007/s00122-019-03277-5 NA NA t3827.T000771 QTL_Ca3_19921595 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line Ca3_19921595 NA 0 0 0 0 8.39189869023526 10.1007/s00122-019-03277-5 NA NA t3827.T000772 QTL_Ca3_19921611 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line Ca3_19921611 NA 0 0 0 0 1.40972445050326 10.1007/s00122-019-03277-5 NA NA t3827.T000773 QTL_Ca3_20045543 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line Ca3_20045543 NA 0 0 0 0 4.14742396339665 10.1007/s00122-019-03277-5 NA NA t3827.T000774 QTL_Ca3_20122534 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line Ca3_20122534 NA 0 0 0 0 2.22810696965441 10.1007/s00122-019-03277-5 NA NA t3827.T000775 QTL_Ca3_20177050 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line Ca3_20177050 NA 0 0 0 0 5.40597767292433 10.1007/s00122-019-03277-5 NA NA t3827.T000776 QTL_Ca3_20177055 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line Ca3_20177055 NA 0 0 0 0 1.32343873214239 10.1007/s00122-019-03277-5 NA NA t3827.T000777 QTL_Ca3_21283920 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line Ca3_21283920 NA 0 0 0 0 9.78253519083352 10.1007/s00122-019-03277-5 NA NA t3827.T000778 QTL_Ca3_21283925 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line Ca3_21283925 NA 0 0 0 0 7.01309113641091 10.1007/s00122-019-03277-5 NA NA t3827.T000779 QTL_Ca3_21283949 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line Ca3_21283949 NA 0 0 0 0 4.64478699116889 10.1007/s00122-019-03277-5 NA NA t3827.T000780 QTL_Ca3_21706963 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line Ca3_21706963 NA 0 0 0 0 4.88968385834941 10.1007/s00122-019-03277-5 NA NA t3827.T000781 QTL_Ca3_21706964 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line Ca3_21706964 NA 0 0 0 0 4.88968385834941 10.1007/s00122-019-03277-5 NA NA t3827.T000782 QTL_Ca3_21758600 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line Ca3_21758600 NA 0 0 0 0 6.39602213830605 10.1007/s00122-019-03277-5 NA NA t3827.T000783 QTL_Ca3_21775854 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line Ca3_21775854 NA 0 0 0 0 7.4376557024103e 10.1007/s00122-019-03277-5 NA NA t3827.T000784 QTL_Ca3_21777546 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line Ca3_21777546 NA 0 0 0 0 8.67331945725831 10.1007/s00122-019-03277-5 NA NA t3827.T000785 QTL_Ca3_21777560 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line Ca3_21777560 NA 0 0 0 0 2.23081249536328 10.1007/s00122-019-03277-5 NA NA t3827.T000786 QTL_Ca3_21783183 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line Ca3_21783183 NA 0 0 0 0 4.32828746636808 10.1007/s00122-019-03277-5 NA NA t3827.T000787 QTL_Ca3_21806637 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line Ca3_21806637 NA 0 0 0 0 7.04362469233545 10.1007/s00122-019-03277-5 NA NA t3827.T000788 QTL_Ca3_22724462 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line Ca3_22724462 NA 0 0 0 0 3.38586017733745 10.1007/s00122-019-03277-5 NA NA t3827.T000789 QTL_Ca3_36503423 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line Ca3_36503423 NA 0 0 0 0 2.52041399870571 10.1007/s00122-019-03277-5 NA NA t3827.T000790 QTL_CaGM13632_Ca3_23246513 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line CaGM13632(Ca3:23246513) NA 0 0 0 0 1.57588405823348 10.1007/s00122-019-03277-5 NA NA t3827.T000791 QTL_CaGM13641_Ca3_23312509 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line CaGM13641(Ca3:23312509) NA 0 0 0 0 3.88825773361389 10.1007/s00122-019-03277-5 NA NA t3827.T000792 QTL_Scaffold8586_900 3 SW_GH (100-seed weight_greenhouse) GLM model RIL recombinant inbred line Scaffold8586_900 NA 0 0 0 0 4.73235889798934 10.1007/s00122-019-03277-5 NA NA t3827.T000793 QTL_aha10_Ca3_23262576 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line aha10(Ca3:23262576) NA 0 0 0 0 1.36283975069921 10.1007/s00122-019-03277-5 NA NA t3827.T000794 QTL_AN3 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line AN3 NA 0 0 0 0 6.23092276800689 10.1007/s00122-019-03277-5 NA NA t3827.T000795 QTL_Ca3_19821186 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line Ca3_19821186 NA 0 0 0 0 2.81460353993813 10.1007/s00122-019-03277-5 NA NA t3827.T000796 QTL_Ca3_19853745 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line Ca3_19853745 NA 0 0 0 0 1.25178818865654 10.1007/s00122-019-03277-5 NA NA t3827.T000797 QTL_Ca3_19853805 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line Ca3_19853805 NA 0 0 0 0 1.25178818865654 10.1007/s00122-019-03277-5 NA NA t3827.T000798 QTL_Ca3_19908491 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line Ca3_19908491 NA 0 0 0 0 3.88731026713228 10.1007/s00122-019-03277-5 NA NA t3827.T000799 QTL_Ca3_19908527 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line Ca3_19908527 NA 0 0 0 0 1.22170350086051 10.1007/s00122-019-03277-5 NA NA t3827.T000800 QTL_Ca3_19921595 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line Ca3_19921595 NA 0 0 0 0 1.68419824488538 10.1007/s00122-019-03277-5 NA NA t3827.T000801 QTL_Ca3_19921611 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line Ca3_19921611 NA 0 0 0 0 2.28137565379467 10.1007/s00122-019-03277-5 NA NA t3827.T000802 QTL_Ca3_20045543 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line Ca3_20045543 NA 0 0 0 0 9.70248163231438 10.1007/s00122-019-03277-5 NA NA t3827.T000803 QTL_Ca3_20122534 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line Ca3_20122534 NA 0 0 0 0 4.7581034677856e 10.1007/s00122-019-03277-5 NA NA t3827.T000804 QTL_Ca3_20177050 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line Ca3_20177050 NA 0 0 0 0 2.20217088581398 10.1007/s00122-019-03277-5 NA NA t3827.T000805 QTL_Ca3_20177055 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line Ca3_20177055 NA 0 0 0 0 8.6569688513989e 10.1007/s00122-019-03277-5 NA NA t3827.T000806 QTL_Ca3_21283920 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line Ca3_21283920 NA 0 0 0 0 7.15151207666872 10.1007/s00122-019-03277-5 NA NA t3827.T000807 QTL_Ca3_21283925 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line Ca3_21283925 NA 0 0 0 0 3.42227590807632 10.1007/s00122-019-03277-5 NA NA t3827.T000808 QTL_Ca3_21283949 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line Ca3_21283949 NA 0 0 0 0 2.39873539145641 10.1007/s00122-019-03277-5 NA NA t3827.T000809 QTL_Ca3_21706963 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line Ca3_21706963 NA 0 0 0 0 8.18604050831996 10.1007/s00122-019-03277-5 NA NA t3827.T000810 QTL_Ca3_21706964 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line Ca3_21706964 NA 0 0 0 0 8.18604050831996 10.1007/s00122-019-03277-5 NA NA t3827.T000811 QTL_Ca3_21758600 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line Ca3_21758600 NA 0 0 0 0 6.51294797990985 10.1007/s00122-019-03277-5 NA NA t3827.T000812 QTL_Ca3_21775854 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line Ca3_21775854 NA 0 0 0 0 1.42490318681663 10.1007/s00122-019-03277-5 NA NA t3827.T000813 QTL_Ca3_21777546 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line Ca3_21777546 NA 0 0 0 0 1.23623895951891 10.1007/s00122-019-03277-5 NA NA t3827.T000814 QTL_Ca3_21777560 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line Ca3_21777560 NA 0 0 0 0 3.45523395827926 10.1007/s00122-019-03277-5 NA NA t3827.T000815 QTL_Ca3_21783183 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line Ca3_21783183 NA 0 0 0 0 1.50027959695854 10.1007/s00122-019-03277-5 NA NA t3827.T000816 QTL_Ca3_21806637 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line Ca3_21806637 NA 0 0 0 0 5.63181946861268 10.1007/s00122-019-03277-5 NA NA t3827.T000817 QTL_Ca3_22724462 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line Ca3_22724462 NA 0 0 0 0 1.14263531958627 10.1007/s00122-019-03277-5 NA NA t3827.T000818 QTL_Ca4_48359533 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line Ca4_48359533 NA 0 0 0 0 7.44037044626329 10.1007/s00122-019-03277-5 NA NA t3827.T000819 QTL_CaGM13632_Ca3_23246513 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line CaGM13632(Ca3:23246513) NA 0 0 0 0 1.36283975069921 10.1007/s00122-019-03277-5 NA NA t3827.T000820 QTL_CaGM13641_Ca3_23312509 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line CaGM13641(Ca3:23312509) NA 0 0 0 0 1.81753801813119 10.1007/s00122-019-03277-5 NA NA t3827.T000821 QTL_Scaffold8586_900 3 SW_ICR (100-seed weight_ICRISAT) GLM model RIL recombinant inbred line Scaffold8586_900 NA 0 0 0 0 1.46934171726284 10.1007/s00122-019-03277-5 NA NA t3827.T000822 3 Total dry root weight to total plant dry weight ratio QTL-seq ICC 4958 × ICC 1882 RIL Ca_04586_13666705 NA CaLG04 13666705 0 0 0 56.33 10.1111/pbi.12567 NA NA t3827.T000823 3 Total dry root weight to total plant dry weight ratio QTL-seq ICC 4958 × ICC 1882 RIL Ca_04493_13666728 NA CaLG04 13666728 0 0 0 51.11 10.1111/pbi.12567 NA NA t3827.T000824 3 Total pod number Interval mapping ICCV 2 × JG 11 F8 ICCM0034 NA 0 0 CaM0906 0 0 0.91 3.54 10.1186/s12870-015-0491-8 NA NA t3827.T000825 3 Total pod number Interval mapping ICCV 2 × JG 11 F8 CaM2031 NA 0 0 CKAM0165 0 0 14.91 2.52 10.1186/s12870-015-0491-8 NA NA t3827.T000826 qts01_2 3 TS (Total Number of Seeds Per Plot) composite interval mapping (sing RIL recombinant inbred line Ca2_34481663 NA 2 0 0 Ca2_35860429 0 0 65.81 5.756786 10.3390/ijms19082166 NA NA t3827.T000827 qts01_2 3 TS (Total Number of Seeds Per Plot) composite interval mapping (sing RIL recombinant inbred line Ca2_34481663 NA 2 0 0 Ca2_35860429 0 0 66.81 4.24 10.3390/ijms19082166 NA NA t3827.T000828 qts02_5 3 TS (Total Number of Seeds Per Plot) composite interval mapping (mult RIL recombinant inbred line Ca5_44667768 NA 5 0 0 Ca5_46955940 0 0 5.41 9.066232 10.3390/ijms19082166 NA NA t3827.T000829 qts02_5 3 TS (Total Number of Seeds Per Plot) composite interval mapping (sing RIL recombinant inbred line Ca5_44667768 NA 5 0 0 Ca5_46955940 0 0 5.41 7.302932 10.3390/ijms19082166 NA NA t3827.T000830 qts02_5 3 TS (Total Number of Seeds Per Plot) composite interval mapping (sing RIL recombinant inbred line Ca5_44667768 NA 5 0 0 Ca5_46955940 0 0 5.41 8.54 10.3390/ijms19082166 NA NA t3827.T000831 qts03_6 3 TS (Total Number of Seeds Per Plot) composite interval mapping (sing RIL recombinant inbred line Ca6_51157939 NA 6 0 0 Ca6_23023346 0 0 27.81 3.49 10.3390/ijms19082166 NA NA t3827.T000832 qts04_6 3 TS (Total Number of Seeds Per Plot) composite interval mapping (mult RIL recombinant inbred line Ca6_14353624 NA 6 0 0 Ca6_7846335 0 0 65.41 7.150923 10.3390/ijms19082166 NA NA t3827.T000833 qts04_6 3 TS (Total Number of Seeds Per Plot) composite interval mapping (sing RIL recombinant inbred line Ca6_14353624 NA 6 0 0 Ca6_7846335 0 0 64.41 6.78 10.3390/ijms19082166 NA NA t3827.T000834 qts05_7 3 TS (Total Number of Seeds Per Plot) composite interval mapping (mult RIL recombinant inbred line Ca7_6558397 NA 7 0 0 SCAF1_959831 0 0 23.81 3.95874 10.3390/ijms19082166 NA NA t3827.T000835 qts05_7 3 TS (Total Number of Seeds Per Plot) composite interval mapping (sing RIL recombinant inbred line Ca7_6558397 NA 7 0 0 SCAF1_959831 0 0 23.81 3.35 10.3390/ijms19082166 NA NA t3827.T000836 qts06_7 3 TS (Total Number of Seeds Per Plot) composite interval mapping (mult RIL recombinant inbred line Ca7_10657307 NA 7 0 0 Ca7_13059720 0 0 37.11 6.282302 10.3390/ijms19082166 NA NA t3827.T000837 qts06_7 3 TS (Total Number of Seeds Per Plot) composite interval mapping (sing RIL recombinant inbred line Ca7_10657307 NA 7 0 0 Ca7_13059720 0 0 37.11 5.98 10.3390/ijms19082166 NA NA t3827.T000838 qts07_6 3 TS (Total Number of Seeds Per Plot) composite interval mapping (sing RIL recombinant inbred line Ca6_2549991 NA 6 0 0 Ca6_1815278 0 0 93.81 4.032573 10.3390/ijms19082166 NA NA t3827.T000839 qts08_7 3 TS (Total Number of Seeds Per Plot) composite interval mapping (sing RIL recombinant inbred line SCAF1_959831 NA 7 0 0 Ca7_10657307 0 0 36.21 5.991314 10.3390/ijms19082166 NA NA t3827.T000840 qvs01_1 3 VS (Visual Scoring) composite interval mapping (sing RIL recombinant inbred line Ca1_11411507 NA 1 0 0 Ca1_11329046 0 0 10.91 5.38 10.3390/ijms19082166 NA NA t3827.T000841 qvs02_1 3 VS (Visual Scoring) composite interval mapping (mult RIL recombinant inbred line Ca1_34727065 NA 1 0 0 Ca1_8100906 0 0 27.41 6.180239 10.3390/ijms19082166 NA NA t3827.T000842 qvs02_1 3 VS (Visual Scoring) composite interval mapping (sing RIL recombinant inbred line Ca1_34727065 NA 1 0 0 Ca1_8100906 0 0 27.41 4.07 10.3390/ijms19082166 NA NA t3827.T000843 qvs03_4 3 VS (Visual Scoring) composite interval mapping (mult RIL recombinant inbred line Ca4_45302183 NA 4 0 0 SCAF9_5885113 0 0 31.61 3.092291 10.3390/ijms19082166 NA NA t3827.T000844 qvs03_4 3 VS (Visual Scoring) composite interval mapping (sing RIL recombinant inbred line Ca4_45302183 NA 4 0 0 SCAF9_5885113 0 0 33.51 5.38 10.3390/ijms19082166 NA NA t3827.T000845 qvs04_5 3 VS (Visual Scoring) composite interval mapping (mult RIL recombinant inbred line Ca5_45745864 NA 5 0 0 Ca5_44760469 0 0 2.01 13.444083 10.3390/ijms19082166 NA NA t3827.T000846 qvs04_5 3 VS (Visual Scoring) composite interval mapping (sing RIL recombinant inbred line Ca5_45745864 NA 5 0 0 Ca5_44760469 0 0 2.01 12.05 10.3390/ijms19082166 NA NA t3827.T000847 qvs05_6 3 VS (Visual Scoring) composite interval mapping (mult RIL recombinant inbred line Ca6_14353624 NA 6 0 0 Ca6_7846335 0 0 61.51 9.537459 10.3390/ijms19082166 NA NA t3827.T000848 qvs05_6 3 VS (Visual Scoring) composite interval mapping (sing RIL recombinant inbred line Ca6_14353624 NA 6 0 0 Ca6_7846335 0 0 61.51 7.259501 10.3390/ijms19082166 NA NA t3827.T000849 qvs05_6 3 VS (Visual Scoring) composite interval mapping (sing RIL recombinant inbred line Ca6_14353624 NA 6 0 0 Ca6_7846335 0 0 62.41 9.79 10.3390/ijms19082166 NA NA t3827.T000850 qvs06_8 3 VS (Visual Scoring) composite interval mapping (mult RIL recombinant inbred line SCAF2_5716888 NA 8 0 0 Ca8_14498074 0 0 3.01 5.283388 10.3390/ijms19082166 NA NA t3827.T000851 qvs06_8 3 VS (Visual Scoring) composite interval mapping (sing RIL recombinant inbred line SCAF2_5716888 NA 8 0 0 Ca8_14498074 0 0 2.01 3.404995 10.3390/ijms19082166 NA NA t3827.T000852 qvs06_8 3 VS (Visual Scoring) composite interval mapping (sing RIL recombinant inbred line SCAF2_5716888 NA 8 0 0 Ca8_14498074 0 0 3.01 6.32 10.3390/ijms19082166 NA NA t3827.T000853 qvs07_1 3 VS (Visual Scoring) composite interval mapping (mult RIL recombinant inbred line Ca1_11685790 NA 1 0 0 Ca1_11372972 0 0 10.71 5.127036 10.3390/ijms19082166 NA NA t3827.T000854 qvs07_1 3 VS (Visual Scoring) composite interval mapping (sing RIL recombinant inbred line Ca1_11685790 NA 1 0 0 Ca1_11372972 0 0 10.11 3.687296 10.3390/ijms19082166 NA NA t3827.T000855 qvs08_1 3 VS (Visual Scoring) composite interval mapping (sing RIL recombinant inbred line Ca1_39746426 NA 1 0 0 Ca1_34727065 0 0 26.41 6.386536 10.3390/ijms19082166 NA NA t3827.T000856 qvs09_1 3 VS (Visual Scoring) composite interval mapping (mult RIL recombinant inbred line Ca1_7647424 NA 1 0 0 Ca1_1732877 0 0 39.01 3.168295 10.3390/ijms19082166 NA NA t3827.T000857 qvs09_1 3 VS (Visual Scoring) composite interval mapping (sing RIL recombinant inbred line Ca1_7647424 NA 1 0 0 Ca1_1732877 0 0 39.01 4.351792 10.3390/ijms19082166 NA NA t3827.T000858 qvs10_5 3 VS (Visual Scoring) composite interval mapping (sing RIL recombinant inbred line Ca5_44667768 NA 5 0 0 Ca5_46955940 0 0 5.41 11.061889 10.3390/ijms19082166 NA NA t3827.T000859 qvs11_7 3 VS (Visual Scoring) composite interval mapping (sing RIL recombinant inbred line Ca7_10657307 NA 7 0 0 Ca7_13059720 0 0 37.11 3.213898 10.3390/ijms19082166 NA NA t3827.T000860 3 Yield Interval mapping ICCV 2 × JG 11 F8 CaM0463 NA 0 0 ICCM272 0 0 72.31 2.76 10.1186/s12870-015-0491-8 NA NA t3827.T000861 3 Yield Interval mapping ICCV 2 × JG 11 F8 CaM0463 NA 0 0 ICCM272 0 0 72.31 4.56 10.1186/s12870-015-0491-8 NA NA t3827.T000862 3 Yield Interval mapping ICCV 2 × JG 11 F8 ICCM0034 NA 0 0 CaM0906 0 0 0.91 3.29 10.1186/s12870-015-0491-8 NA NA t3827.T000863 3 Yield Interval mapping ICCV 2 × JG 11 F8 CaM2031 NA 0 0 CKAM0165 0 0 15.91 2.67 10.1186/s12870-015-0491-8 NA NA t3827.T000864 3 Yield ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_3_35078988 NA 0 0 bin_3_35056553 0 0 3.1784 10.1038/srep15296 NA NA t3827.T000865 3 Yield ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_47375605 NA 0 0 bin_4_47453959 0 0 4.3628 10.1038/srep15296 NA NA t3827.T000866 3 Yield ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_7_12083724 NA 0 0 bin_7_11984393 0 0 3.5273 10.1038/srep15296 NA NA t3827.T000867 3 Yield Interval mapping ICC 4958 × ICC 1882 RIL CaM0046 NA 0 0 Ca1_16552751 0 0 2.076999999999998 9.109663 10.1007/s00438-014-0932-3 NA NA t3827.T000868 3 Yield Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13687456 NA 0 0 NCPGR21 0 0 5.13900000000001 6.466884 10.1007/s00438-014-0932-3 NA NA t3827.T000869 3 Yield Interval mapping ICC 4958 × ICC 1882 RIL Ca8_4106644 NA 0 0 CISR80 0 0 13.441000000000003 10.942454 10.1007/s00438-014-0932-3 NA NA t3827.T000870 qyld-01 3 Yield per plant (g) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021160.1.18699653 NA 1 0 0 CNC_021160.1.30785636 0 0 3.22 10.1371/journal.pone.0254957 NA NA t3827.T000871 qyld-01 3 Yield per plant (g) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021161.1.31430073 NA 2 0 0 CNC_021161.1.9956999 0 0 3.84 10.1371/journal.pone.0254957 NA NA t3827.T000872 qyld-02 3 Yield per plant (g) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021161.1.31430073 NA 2 0 0 CNC_021161.1.9956999 0 0 2.48 10.1371/journal.pone.0254957 NA NA t3827.T000873 qyld-02 3 Yield per plant (g) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021162.1.38774358 NA 3 0 0 CNC_021162.1.29358942 0 0 3.1 10.1371/journal.pone.0254957 NA NA t3827.T000874 qYPP4.1 3 Yield per plant (YPP) composite interval mapping ICC 4958 X DCP 92-3 RIL population recombinant inbred line AX-123642038 NA 0 0 AX-123630146 0 0 86.44 - 87.52 3.5 10.1371/journal.pone.0251669 NA NA t3827.T000875 qYPPC4.1 3 YPP (yield per plant) composite interval mapping RIL recombinant inbred line in F8 generation AX-123630936 NA 0 0 AX-123652553 0 0 87.63 3.7 10.3390/ijms21145058 NA NA t3827.T000876 qYPPC5.1 3 YPP (yield per plant) composite interval mapping RIL recombinant inbred line in F8 generation AX-123653409 NA 0 0 AX-123653399 0 0 20.31 4.7 10.3390/ijms21145058 NA NA t3827.T000877 qYPPC5.1 3 YPP (yield per plant) composite interval mapping RIL recombinant inbred line in F8 generation AX-123653399 NA 0 0 AX-123653409 0 0 20.31 4.9 10.3390/ijms21145058 NA NA t3827.T000878 qYPPC6.1 3 YPP (yield per plant) composite interval mapping RIL recombinant inbred line in F8 generation AX-123655575 NA 0 0 AX-123663343 0 0 236.66 6.5 10.3390/ijms21145058 NA NA t3827.T000879 qYPPC7.1 3 YPP (yield per plant) composite interval mapping RIL recombinant inbred line in F8 generation AX-123620346 NA 0 0 AX-123620222 0 0 120.16 3.2 10.3390/ijms21145058 NA NA t3827.T000880 qYPPS6.1 3 YPP (yield per plant) composite interval mapping RIL recombinant inbred line in F8 generation AX-123635072 NA 0 0 AX-123640437 0 0 270.65 3.5 10.3390/ijms21145058 NA NA t3827.T000881 QTL_on_Chr1 4 3DL (3-Dimentional Leaf area) inclusive composite interval map RIL recombinant inbred line NA 1 16247689 0 1 16256900 0 35 2 10.1186/s12870-018-1245-1 NA NA t3827.T000882 QTL_on_Chr3 4 3DL (3-Dimentional Leaf area) inclusive composite interval map RIL recombinant inbred line NA 3 38153326 0 3 38067857 0 1 2 10.1186/s12870-018-1245-1 NA NA t3827.T000883 QTL_on_Chr4 4 3DL (3-Dimentional Leaf area) inclusive composite interval map RIL recombinant inbred line NA 4 13393647 0 4 13547009 0 46 10 10.1186/s12870-018-1245-1 NA NA t3827.T000884 QTL_on_Chr4 4 3DL (3-Dimentional Leaf area) inclusive composite interval map RIL recombinant inbred line NA 4 13393647 0 4 13547009 0 46 5 10.1186/s12870-018-1245-1 NA NA t3827.T000885 QTL_on_Chr4 4 3DL (3-Dimentional Leaf area) inclusive composite interval map RIL recombinant inbred line NA 4 13393647 0 4 13547009 0 46 6 10.1186/s12870-018-1245-1 NA NA t3827.T000886 QTL_on_Chr6 4 3DL (3-Dimentional Leaf area) inclusive composite interval map RIL recombinant inbred line NA 6 59002540 0 6 45589823 0 171 2 10.1186/s12870-018-1245-1 NA NA t3827.T000887 QTL_on_LG4 4 3DL (3-Dimentional Leaf area) composite interval mapping RIL recombinant inbred line CaM1903 NA 0 0 ICCM0249 0 0 54.51 6 10.1186/s12870-018-1245-1 NA NA t3827.T000888 QTL_on_LG4 4 3DL (3-Dimentional Leaf area) composite interval mapping RIL recombinant inbred line Ca4_16278600 NA 0 0 Ca4_15934901 0 0 59.71 7 10.1186/s12870-018-1245-1 NA NA t3827.T000889 QTL_on_LG4 4 3DL (3-Dimentional Leaf area) composite interval mapping RIL recombinant inbred line NCPGR127 NA 0 0 TAA170 0 0 67.61 7 10.1186/s12870-018-1245-1 NA NA t3827.T000890 QTL_on_LG4 4 3DL (3-Dimentional Leaf area) composite interval mapping RIL recombinant inbred line Ca4_13588956 NA 0 0 Ca4_13699663 0 0 68.71 10 10.1186/s12870-018-1245-1 NA NA t3827.T000891 QTL_on_LG4 4 3DL (3-Dimentional Leaf area) composite interval mapping RIL recombinant inbred line Ca4_13588956 NA 0 0 Ca4_13699663 0 0 68.71 14 10.1186/s12870-018-1245-1 NA NA t3827.T000892 QTL_on_LG4 4 3DL (3-Dimentional Leaf area) composite interval mapping RIL recombinant inbred line Ca4_13840251 NA 0 0 Ca4_11276225 0 0 68.81 4 10.1186/s12870-018-1245-1 NA NA t3827.T000893 QTL_on_LG4 4 3DL (3-Dimentional Leaf area) composite interval mapping RIL recombinant inbred line TAA170 NA 0 0 NCPGR21 0 0 70.11 12 10.1186/s12870-018-1245-1 NA NA t3827.T000894 QTL_on_LG4 4 3DL (3-Dimentional Leaf area) composite interval mapping RIL recombinant inbred line TAA170 NA 0 0 NCPGR21 0 0 71.11 8 10.1186/s12870-018-1245-1 NA NA t3827.T000895 QTL_on_LG4 4 3DL (3-Dimentional Leaf area) composite interval mapping RIL recombinant inbred line Ca4_12982420 NA 0 0 Ca4_13787649 0 0 72.81 13 10.1186/s12870-018-1245-1 NA NA t3827.T000896 QTL_on_LG4 4 3DL (3-Dimentional Leaf area) composite interval mapping RIL recombinant inbred line Ca4_13687456 NA 0 0 TAA170 0 0 76.21 5 10.1186/s12870-018-1245-1 NA NA t3827.T000897 QTL_on_LG4 4 3DL (3-Dimentional Leaf area) composite interval mapping RIL recombinant inbred line TAA170 NA 0 0 NCPGR21 0 0 78.31 6 10.1186/s12870-018-1245-1 NA NA t3827.T000898 QTL_on_LG4 4 3DL (3-Dimentional Leaf area) composite interval mapping RIL recombinant inbred line GA24 NA 0 0 STMS11 0 0 79.01 4 10.1186/s12870-018-1245-1 NA NA t3827.T000899 QTL_on_LG4 4 3DL (3-Dimentional Leaf area) composite interval mapping RIL recombinant inbred line TR11 NA 0 0 GA24 0 0 79.01 5 10.1186/s12870-018-1245-1 NA NA t3827.T000900 QTL_on_LG8 4 3DL (3-Dimentional Leaf area) composite interval mapping RIL recombinant inbred line Ca8_8270503 NA 0 0 CaM1918 0 0 35.31 3 10.1186/s12870-018-1245-1 NA NA t3827.T000901 QTL_on_Chr5 4 3DLG (3-Dimentional Leaf area growth rate) inclusive composite interval map RIL recombinant inbred line NA 5 7175460 0 5 5089713 0 7 3 10.1186/s12870-018-1245-1 NA NA t3827.T000902 QTL_on_LG4 4 3DLG (3-Dimentional Leaf area growth rate) composite interval mapping RIL recombinant inbred line CaM1903 NA 0 0 ICCM0249 0 0 54.51 3 10.1186/s12870-018-1245-1 NA NA t3827.T000903 QTL_on_LG4 4 3DLG (3-Dimentional Leaf area growth rate) composite interval mapping RIL recombinant inbred line TAA170 NA 0 0 NCPGR21 0 0 69.11 3 10.1186/s12870-018-1245-1 NA NA t3827.T000904 QTL_on_LG4 4 3DLG (3-Dimentional Leaf area growth rate) composite interval mapping RIL recombinant inbred line TR11 NA 0 0 GA24 0 0 78.01 3 10.1186/s12870-018-1245-1 NA NA t3827.T000905 QTL_on_LG4 4 3DLG (3-Dimentional Leaf area growth rate) composite interval mapping RIL recombinant inbred line TR11 NA 0 0 GA24 0 0 78.01 3 10.1186/s12870-018-1245-1 NA NA t3827.T000906 QTL_on_LG4 4 3DLG (3-Dimentional Leaf area growth rate) composite interval mapping RIL recombinant inbred line TR11 NA 0 0 GA24 0 0 78.01 3 10.1186/s12870-018-1245-1 NA NA t3827.T000907 QTL_on_LG4 4 3DLG (3-Dimentional Leaf area growth rate) composite interval mapping RIL recombinant inbred line STMS11 NA 0 0 cpPb_680552 0 0 78.91 4 10.1186/s12870-018-1245-1 NA NA t3827.T000908 QTL_on_LG4 4 3DLG (3-Dimentional Leaf area growth rate) composite interval mapping RIL recombinant inbred line STMS11 NA 0 0 cpPb_680552 0 0 78.91 4 10.1186/s12870-018-1245-1 NA NA t3827.T000909 QTL_on_LG6 4 3DLG (3-Dimentional Leaf area growth rate) composite interval mapping RIL recombinant inbred line NCPGR93 NA 0 0 Ca6_18027391 0 0 40.91 3 10.1186/s12870-018-1245-1 NA NA t3827.T000910 qbio-01 4 Biomass per plant (g) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021160.1.41430352 NA 1 0 0 CNC_021160.1.41044856 0 0 4.41 10.1371/journal.pone.0254957 NA NA t3827.T000911 qbio-02 4 Biomass per plant (g) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021163.1.11351378 NA 4 0 0 CNC_021163.1.11351447 0 0 3.33 10.1371/journal.pone.0254957 NA NA t3827.T000912 Ca02625 4 Branch number GWAS Desi and kabuli BN SNP344 NA Ca Kabuli Chr01 11285291 0 0 0 2.1 × 10-9 10.1016/j.plantsci.2016.01.004 NA NA t3827.T000913 Ca06609 4 Branch number GWAS Desi and kabuli BN SNP2 NA Ca Kabuli Chr07 7508884 0 0 0 1.0 × 10-9 10.1016/j.plantsci.2016.01.004 NA NA t3827.T000914 Ca13243 4 Branch number GWAS Desi and kabuli BN SNP3136 NA Ca Kabuli Chr07 7756455 0 0 0 2.0× 10-8 10.1016/j.plantsci.2016.01.004 NA NA t3827.T000915 Ca13354 4 Branch number GWAS Desi and kabuli BN SNP2352 NA Ca Kabuli Chr05 28757467 0 0 0 2.0 × 10-8 10.1016/j.plantsci.2016.01.004 NA NA t3827.T000916 Ca14713 4 Branch number GWAS Desi and kabuli BN SNP606 NA Ca Kabuli Chr02 4981666 0 0 0 1.7 × 10-8 10.1016/j.plantsci.2016.01.004 NA NA t3827.T000917 Ca16149 4 Branch number GWAS Desi and kabuli BN SNP3347 NA Ca Kabuli Chr07 33182932 0 0 0 1.0 × 10-9 10.1016/j.plantsci.2016.01.004 NA NA t3827.T000918 Ca16811 4 Branch number GWAS Desi and kabuli BN SNP3 NA Ca Kabuli Chr08 11544119 0 0 0 1.1 × 10-9 10.1016/j.plantsci.2016.01.004 NA NA t3827.T000919 Ca17638 4 Branch number GWAS Desi and kabuli BN SNP3391 NA Ca Kabuli Chr07 35134863 0 0 0 1.4× 10-9 10.1016/j.plantsci.2016.01.004 NA NA t3827.T000920 Ca19331 4 Branch number GWAS Desi and kabuli BN SNP1 NA Ca Kabuli Chr03 19270907 0 0 0 1.3 × 10-9 10.1016/j.plantsci.2016.01.004 NA NA t3827.T000921 Ca19880 4 Branch number GWAS Desi and kabuli BN SNP2763 NA Ca Kabuli Chr06 21238711 0 0 0 1.6 × 10-9 10.1016/j.plantsci.2016.01.004 NA NA t3827.T000922 Ca22505 4 Branch number GWAS Desi and kabuli BN SNP1024 NA Ca Kabuli Chr03 14653193 0 0 0 1.5 × 10-8 10.1016/j.plantsci.2016.01.004 NA NA t3827.T000923 CaCMS_LS6.1 4 Cell membrane stability composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA6_10020187 NA 0 0 SCA6_10626699 0 0 67.21 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000924 CaCMS_NS3.1 4 Cell membrane stability composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA3_8852605 NA 0 0 SCA3_9063118 0 0 0.01 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000925 CaCMS_NS4.1 4 Cell membrane stability composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA4_48720031 NA 0 0 SCA4_11271232 0 0 133.61 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000926 salClqtl.1 4 Chloride whole genome average interval ma Rupali/Genesis836 population recombinant inbred line DArT616 NA CaLG05 0 0 DArT610(C) 0 0 78.37 - 83.02 4.9976 10.3389/fpls.2021.667910 NA NA t3827.T000927 salClqtl.2 4 Chloride whole genome average interval ma Rupali/Genesis836 population recombinant inbred line SNP14_C14_12_74(C) NA CaLG04 0 0 SNP15_C14_13_06 0 0 71.61 - 72.17 14.728 10.3389/fpls.2021.667910 NA NA t3827.T000928 CaCHL_LS2.1 4 Chlorophyll content composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA2_30364073 NA 0 0 SCA2_30370411 0 0 38.31 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000929 CaCHL_LS5.1 4 Chlorophyll content composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA5_1154130 NA 0 0 SCA5_30627756 0 0 44.01 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000930 CaCHL_LS5.2 4 Chlorophyll content composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA5_11665932 NA 0 0 SCA5_1154130 0 0 44.31 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000931 CaCHL_NS4.1 4 Chlorophyll content composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA4_14861717 NA 0 0 SCA4_48715028 0 0 142.91 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000932 CaCHL_NS4.2 4 Chlorophyll content composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA4_48715028 NA 0 0 SCA4_48714912 0 0 150.11 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000933 CaCHL_NS4.3 4 Chlorophyll content composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA4_14861717 NA 0 0 SCA4_48715028 0 0 151.51 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000934 CaCHL_NS4.3 4 Chlorophyll content composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA4_48714912 NA 0 0 SCA4_48720330 0 0 151.51 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T000935 MTA_at_ICCM0297 4 Chlorophyll content (CHL) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet ICCM0297 NA 0 0 0 0 0.00732 33707355 NA NA t3827.T000936 MTA_at_NCPGR12 4 Chlorophyll content (CHL) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR12 NA 0 0 0 0 0.00302 33707355 NA NA t3827.T000937 MTA_at_NCPGR232 4 Chlorophyll content (CHL) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR232 NA 0 0 0 0 0.00831 33707355 NA NA t3827.T000938 MTA_at_TA64 4 Chlorophyll content (CHL) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet TA64 NA 0 0 0 0 0.00211 33707355 NA NA t3827.T000939 MTA_at_TAA60 4 Chlorophyll content (CHL) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet TAA60 NA 0 0 0 0 0.000319 33707355 NA NA t3827.T000940 MTA_at_TAA60 4 Chlorophyll content (CHL) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet TAA60 NA 0 0 0 0 0.00669 33707355 NA NA t3827.T000941 qSS-ICR-3.2 4 COL (flower color) general linear model (GLM)-based RIL recombinant inbred line Ca3:22724462 NA 0 0 CaGM13632 0 0 86.7 10.1007/s00122-019-03277-5 NA NA t3827.T000942 QTL_Scaffold8586_900 4 COL_GH (flower color_greenhouse) GLM model RIL recombinant inbred line Scaffold8586_900 NA 0 0 0 0 5.12441095522121 10.1007/s00122-019-03277-5 NA NA t3827.T000943 QTL_aha10_Ca3_23262576 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line aha10(Ca3:23262576) NA 0 0 0 0 0 10.1007/s00122-019-03277-5 NA NA t3827.T000944 QTL_AN3 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line AN3 NA 0 0 0 0 6.96478787726016 10.1007/s00122-019-03277-5 NA NA t3827.T000945 QTL_Ca3_14875001 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line Ca3_14875001 NA 0 0 0 0 3.16896278595292 10.1007/s00122-019-03277-5 NA NA t3827.T000946 QTL_Ca3_18996437 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line Ca3_18996437 NA 0 0 0 0 2.6504266196078e 10.1007/s00122-019-03277-5 NA NA t3827.T000947 QTL_Ca3_19821186 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line Ca3_19821186 NA 0 0 0 0 9.969701675772e- 10.1007/s00122-019-03277-5 NA NA t3827.T000948 QTL_Ca3_19853745 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line Ca3_19853745 NA 0 0 0 0 1.27463273439393 10.1007/s00122-019-03277-5 NA NA t3827.T000949 QTL_Ca3_19853805 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line Ca3_19853805 NA 0 0 0 0 1.27463273439393 10.1007/s00122-019-03277-5 NA NA t3827.T000950 QTL_Ca3_19908491 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line Ca3_19908491 NA 0 0 0 0 3.46430838413561 10.1007/s00122-019-03277-5 NA NA t3827.T000951 QTL_Ca3_19908527 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line Ca3_19908527 NA 0 0 0 0 1.84927865222511 10.1007/s00122-019-03277-5 NA NA t3827.T000952 QTL_Ca3_19921595 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line Ca3_19921595 NA 0 0 0 0 3.21359379917341 10.1007/s00122-019-03277-5 NA NA t3827.T000953 QTL_Ca3_19921611 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line Ca3_19921611 NA 0 0 0 0 5.19360906899521 10.1007/s00122-019-03277-5 NA NA t3827.T000954 QTL_Ca3_20045543 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line Ca3_20045543 NA 0 0 0 0 3.82377162515061 10.1007/s00122-019-03277-5 NA NA t3827.T000955 QTL_Ca3_20122534 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line Ca3_20122534 NA 0 0 0 0 3.18136719781494 10.1007/s00122-019-03277-5 NA NA t3827.T000956 QTL_Ca3_20177050 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line Ca3_20177050 NA 0 0 0 0 2.9413833891808e 10.1007/s00122-019-03277-5 NA NA t3827.T000957 QTL_Ca3_20177055 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line Ca3_20177055 NA 0 0 0 0 1.28452010287573 10.1007/s00122-019-03277-5 NA NA t3827.T000958 QTL_Ca3_21283920 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line Ca3_21283920 NA 0 0 0 0 2.33234889799955 10.1007/s00122-019-03277-5 NA NA t3827.T000959 QTL_Ca3_21283925 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line Ca3_21283925 NA 0 0 0 0 1.50407159891873 10.1007/s00122-019-03277-5 NA NA t3827.T000960 QTL_Ca3_21283949 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line Ca3_21283949 NA 0 0 0 0 1.55996511144547 10.1007/s00122-019-03277-5 NA NA t3827.T000961 QTL_Ca3_21706963 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line Ca3_21706963 NA 0 0 0 0 2.39166054144963 10.1007/s00122-019-03277-5 NA NA t3827.T000962 QTL_Ca3_21706964 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line Ca3_21706964 NA 0 0 0 0 2.39166054144967 10.1007/s00122-019-03277-5 NA NA t3827.T000963 QTL_Ca3_21758600 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line Ca3_21758600 NA 0 0 0 0 8.01141384535917 10.1007/s00122-019-03277-5 NA NA t3827.T000964 QTL_Ca3_21775854 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line Ca3_21775854 NA 0 0 0 0 3.21840939032736 10.1007/s00122-019-03277-5 NA NA t3827.T000965 QTL_Ca3_21777546 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line Ca3_21777546 NA 0 0 0 0 3.71559151523132 10.1007/s00122-019-03277-5 NA NA t3827.T000966 QTL_Ca3_21777560 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line Ca3_21777560 NA 0 0 0 0 5.33328060723911 10.1007/s00122-019-03277-5 NA NA t3827.T000967 QTL_Ca3_21783183 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line Ca3_21783183 NA 0 0 0 0 9.6891502942324e 10.1007/s00122-019-03277-5 NA NA t3827.T000968 QTL_Ca3_21806637 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line Ca3_21806637 NA 0 0 0 0 1.4265659814505e 10.1007/s00122-019-03277-5 NA NA t3827.T000969 QTL_Ca3_22724462 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line Ca3_22724462 NA 0 0 0 0 4.57952420833506 10.1007/s00122-019-03277-5 NA NA t3827.T000970 QTL_Ca5_14763316 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line Ca5_14763316 NA 0 0 0 0 7.02537446326183 10.1007/s00122-019-03277-5 NA NA t3827.T000971 QTL_CaGM13632_Ca3_23246513 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line CaGM13632(Ca3:23246513) NA 0 0 0 0 0 10.1007/s00122-019-03277-5 NA NA t3827.T000972 QTL_CaGM13641_Ca3_23312509 4 COL_ICR (flower color_ICRISAT) GLM model RIL recombinant inbred line CaGM13641(Ca3:23312509) NA 0 0 0 0 5.36373364986915 10.1007/s00122-019-03277-5 NA NA t3827.T000973 4 Day to 50% flowering Interval mapping ICC 4958 × ICC 17160 F5 CID_C_403402 NA 0 0 CID_C_492721 0 0 5.997 - 7.033 10.1093/dnares/dsv020 NA NA t3827.T000974 4 Day to 50% flowering Interval mapping ICC 4958 × ICC 17160 F5 CID_C_4546528 NA 0 0 CID_C_4703718 0 0 46.061 - 47.616 10.1093/dnares/dsv020 NA NA t3827.T000975 4 Day to 50% flowering Interval mapping ICC 4958 × ICC 17160 F5 CID_C_4424175 NA 0 0 CID_C_4575860 0 0 38.314 - 39.606 10.1093/dnares/dsv020 NA NA t3827.T000976 qdhf-01 4 Days to 100% flowering composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021160.1.35885685 NA 1 0 0 CNC_021160.1.8023246 0 0 3.58 10.1371/journal.pone.0254957 NA NA t3827.T000977 qdhf-01 4 Days to 100% flowering composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021160.1.35885685 NA 1 0 0 CNC_021160.1.8023246 0 0 3.75 10.1371/journal.pone.0254957 NA NA t3827.T000978 qdhf-02 4 Days to 100% flowering composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021162.1.21073044 NA 3 0 0 CNC_021162.1.39357194 0 0 3.11 10.1371/journal.pone.0254957 NA NA t3827.T000979 qdhf-02 4 Days to 100% flowering composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021163.1.13462111 NA 4 0 0 CNC_021163.1.11351378 0 0 4.58 10.1371/journal.pone.0254957 NA NA t3827.T000980 qdhf-03 4 Days to 100% flowering composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021163.1.13462111 NA 4 0 0 CNC_021163.1.11351378 0 0 3.52 10.1371/journal.pone.0254957 NA NA t3827.T000981 qdhf-03 4 Days to 100% flowering composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021163.1.48163277 NA 4 0 0 CNC_021163.1.48245021 0 0 3.76 10.1371/journal.pone.0254957 NA NA t3827.T000982 qdhf-04 4 Days to 100% flowering composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021163.1.48163277 NA 4 0 0 CNC_021163.1.48245021 0 0 2.5 10.1371/journal.pone.0254957 NA NA t3827.T000983 4 Days to 50% flowering ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA CaLG08 49660 0 bin_8_5984553 0 0 9.47 28.19 10.1038/srep15296 NA NA t3827.T000984 qdff-01 4 Days to 50% flowering composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021160.1.35885685 NA 1 0 0 CNC_021160.1.8023246 0 0 3.93 10.1371/journal.pone.0254957 NA NA t3827.T000985 qdff-01 4 Days to 50% flowering composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021160.1.33682907 NA 1 0 0 CNC_021160.1.35885685 0 0 4.46 10.1371/journal.pone.0254957 NA NA t3827.T000986 qdff-02 4 Days to 50% flowering composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021160.1.35885685 NA 1 0 0 CNC_021160.1.8023246 0 0 7.26 10.1371/journal.pone.0254957 NA NA t3827.T000987 qdff-02 4 Days to 50% flowering composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021162.1.21073044 NA 3 0 0 CNC_021162.1.39357194 0 0 3.29 10.1371/journal.pone.0254957 NA NA t3827.T000988 qdff-03 4 Days to 50% flowering composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021163.1.11351378 NA 4 0 0 CNC_021163.1.11351447 0 0 2.5 10.1371/journal.pone.0254957 NA NA t3827.T000989 qdff-03 4 Days to 50% flowering composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021163.1.11351378 NA 4 0 0 CNC_021163.1.11351447 0 0 3.71 10.1371/journal.pone.0254957 NA NA t3827.T000990 qdff-04 4 Days to 50% flowering composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021165.1.18056125 NA 6 0 0 CNC_021165.1.513774 0 0 3.07 10.1371/journal.pone.0254957 NA NA t3827.T000991 qdff-04 4 Days to 50% flowering composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021165.1.18056125 NA 6 0 0 CNC_021165.1.513774 0 0 3.09 10.1371/journal.pone.0254957 NA NA t3827.T000992 4 Days to 50% flowering ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_1_1216139 NA 0 0 bin_1_45888678 0 0 3.1227 10.1038/srep15296 NA NA t3827.T000993 4 Days to 50% flowering ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_5_45473300 NA 0 0 bin_5_45530795 0 0 3.2437 10.1038/srep15296 NA NA t3827.T000994 4 Days to 50% flowering ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_5_42079654 NA 0 0 bin_5_42142721 0 0 3.3221 10.1038/srep15296 NA NA t3827.T000995 4 Days to 50% flowering ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_5_45473300 NA 0 0 bin_5_45530795 0 0 3.4091 10.1038/srep15296 NA NA t3827.T000996 4 Days to 50% flowering ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_5_45473300 NA 0 0 bin_5_45530795 0 0 3.54 10.1038/srep15296 NA NA t3827.T000997 4 Days to 50% flowering ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_5_45473300 NA 0 0 bin_5_45530795 0 0 3.5882 10.1038/srep15296 NA NA t3827.T000998 4 Days to 50% flowering ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_5_45473300 NA 0 0 bin_5_45530795 0 0 3.6977 10.1038/srep15296 NA NA t3827.T000999 4 Days to 50% flowering ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_5_45473300 NA 0 0 bin_5_45530795 0 0 3.8029 10.1038/srep15296 NA NA t3827.T001000 4 Days to 50% flowering ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_6_5555667 NA 0 0 bin_6_6943324 0 0 3.1075 10.1038/srep15296 NA NA t3827.T001001 4 Days to 50% flowering ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 15.0311 10.1038/srep15296 NA NA t3827.T001002 4 Days to 50% flowering ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 17.8784 10.1038/srep15296 NA NA t3827.T001003 4 Days to 50% flowering ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 17.8931 10.1038/srep15296 NA NA t3827.T001004 4 Days to 50% flowering ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 18.3751 10.1038/srep15296 NA NA t3827.T001005 4 Days to 50% flowering ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 19.8359 10.1038/srep15296 NA NA t3827.T001006 4 Days to 50% flowering ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 20.0938 10.1038/srep15296 NA NA t3827.T001007 4 Days to 50% flowering ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 21.302 10.1038/srep15296 NA NA t3827.T001008 4 Days to 50% flowering ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 22.994 10.1038/srep15296 NA NA t3827.T001009 4 Days to 50% flowering ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 27.6591 10.1038/srep15296 NA NA t3827.T001010 4 Days to 50% flowering ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 28.1917 10.1038/srep15296 NA NA t3827.T001011 4 Days to 50% flowering ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_3992475 NA 0 0 bin_8_3962288 0 0 3.089 10.1038/srep15296 NA NA t3827.T001012 4 Days to 50% flowering ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 7.0434 10.1038/srep15296 NA NA t3827.T001013 4 Days to 50% flowering ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 8.3564 10.1038/srep15296 NA NA t3827.T001014 4 Days to 50% flowering ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 8.9758 10.1038/srep15296 NA NA t3827.T001015 4 Days to 50% flowering Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12558541 NA 0 0 Ca4_11276225 0 0 1.8120000000000118 8.566775 10.1007/s00438-014-0932-3 NA NA t3827.T001016 4 Days to 50% flowering Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13687456 NA 0 0 NCPGR21 0 0 5.13900000000001 11.765472 10.1007/s00438-014-0932-3 NA NA t3827.T001017 4 Days to 50% flowering Interval mapping ICC 4958 × ICC 1882 RIL Ca6_158938 NA 0 0 CaM0399 0 0 9.479 5.32899 10.1007/s00438-014-0932-3 NA NA t3827.T001018 4 Days to 50% flowering Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 CISR80 0 0 15.125000000000007 7.218241 10.1007/s00438-014-0932-3 NA NA t3827.T001019 4 Days to 50% flowering Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 Ca8_3050452 0 0 7.330999999999996 10.366992 10.1007/s00438-014-0932-3 NA NA t3827.T001020 4 Days to 50% flowering Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 Ca8_3050452 0 0 7.330999999999996 16.299674 10.1007/s00438-014-0932-3 NA NA t3827.T001021 4 Days to 50% flowering Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 Ca8_3050452 0 0 7.330999999999996 17.628664 10.1007/s00438-014-0932-3 NA NA t3827.T001022 4 Days to 50% flowering Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 Ca8_3050452 0 0 7.330999999999996 19.092291 10.1007/s00438-014-0932-3 NA NA t3827.T001023 4 Days to 50% flowering Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 Ca8_3050452 0 0 7.330999999999996 21.418024 10.1007/s00438-014-0932-3 NA NA t3827.T001024 4 Days to 50% flowering Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 Ca8_3050452 0 0 7.330999999999996 26.712269 10.1007/s00438-014-0932-3 NA NA t3827.T001025 4 Days to 50% flowering Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 Ca8_3050452 0 0 7.330999999999996 27.939197 10.1007/s00438-014-0932-3 NA NA t3827.T001026 4 Days to 50% flowering Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 Ca8_3050452 0 0 7.330999999999996 30.625407 10.1007/s00438-014-0932-3 NA NA t3827.T001027 4 Days to 50% flowering Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 Ca8_3050452 0 0 7.330999999999996 32.823018 10.1007/s00438-014-0932-3 NA NA t3827.T001028 4 Days to 50% flowering Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 Ca8_3050452 0 0 7.330999999999996 37.546145 10.1007/s00438-014-0932-3 NA NA t3827.T001029 4 Days to 50% flowering Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 Ca8_3050452 0 0 7.330999999999996 44.416938 10.1007/s00438-014-0932-3 NA NA t3827.T001030 4 Days to 50% flowering Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 Ca8_3050452 0 0 7.330999999999996 46.026059 10.1007/s00438-014-0932-3 NA NA t3827.T001031 4 Days to 50% flowering Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 Ca8_3050452 0 0 7.330999999999996 9.218241 10.1007/s00438-014-0932-3 NA NA t3827.T001032 4 Days to 50% flowering Interval mapping ICC 4958 × ICC 1882 RIL Ca8_3050452 NA 0 0 CISR80 0 0 7.794000000000011 6.345277 10.1007/s00438-014-0932-3 NA NA t3827.T001033 4 Days to 50% flowering Interval mapping ICC 4958 × ICC 1882 RIL CaM0812 NA 0 0 NCPGR164 0 0 8.805999999999997 11.702497 10.1007/s00438-014-0932-3 NA NA t3827.T001034 4 Days to 50% flowering Interval mapping ICC 4958 × ICC 1882 RIL CaM0812 NA 0 0 NCPGR164 0 0 8.805999999999997 14.840391 10.1007/s00438-014-0932-3 NA NA t3827.T001035 4 Days to 50% flowering Interval mapping ICC 4958 × ICC 1882 RIL CaM0812 NA 0 0 NCPGR164 0 0 8.805999999999997 17.305103 10.1007/s00438-014-0932-3 NA NA t3827.T001036 4 Days to 50% flowering Interval mapping ICC 4958 × ICC 1882 RIL CaM0812 NA 0 0 NCPGR164 0 0 8.805999999999997 21.774159 10.1007/s00438-014-0932-3 NA NA t3827.T001037 4 Days to 50% flowering Interval mapping ICC 4958 × ICC 1882 RIL CaM0812 NA 0 0 NCPGR164 0 0 8.805999999999997 25.715527 10.1007/s00438-014-0932-3 NA NA t3827.T001038 4 Days to 50% flowering Interval mapping ICC 4958 × ICC 1882 RIL CaM0812 NA 0 0 NCPGR164 0 0 8.805999999999997 28.595005 10.1007/s00438-014-0932-3 NA NA t3827.T001039 4 Days to 50% flowering Interval mapping ICC 4958 × ICC 1882 RIL CaM0812 NA 0 0 NCPGR164 0 0 8.805999999999997 31.913138 10.1007/s00438-014-0932-3 NA NA t3827.T001040 4 Days to 50% flowering Interval mapping ICC 4958 × ICC 1882 RIL CaM0812 NA 0 0 NCPGR164 0 0 8.805999999999997 9.044517 10.1007/s00438-014-0932-3 NA NA t3827.T001041 4 Days to flower Interval mapping ICCV 2 × JG 11 F8 CKAM0003 NA 0 0 CKAM1003 0 0 123.31 5.73 10.1186/s12870-015-0491-8 NA NA t3827.T001042 4 Days to flower Interval mapping ICCV 2 × JG 11 F8 CKAM0003 NA 0 0 CKAM1003 0 0 124.31 2.91 10.1186/s12870-015-0491-8 NA NA t3827.T001043 4 Days to flower Interval mapping ICCV 2 × JG 11 F8 CaM0463 NA 0 0 ICCM272 0 0 72.31 6.26 10.1186/s12870-015-0491-8 NA NA t3827.T001044 4 Days to flower Interval mapping ICCV 2 × JG 11 F8 CaM0463 NA 0 0 ICCM272 0 0 72.31 8.01 10.1186/s12870-015-0491-8 NA NA t3827.T001045 4 Days to flower Interval mapping ICCV 2 × JG 11 F8 CaM2031 NA 0 0 CKAM0165 0 0 20.31 2.96 10.1186/s12870-015-0491-8 NA NA t3827.T001046 4 Days to flower Interval mapping ICCV 2 × JG 11 F8 CKAM1903 NA 0 0 CKAM0343 0 0 3.31 10.62 10.1186/s12870-015-0491-8 NA NA t3827.T001047 4 Days to flower Interval mapping ICCV 2 × JG 11 F8 CKAM1903 NA 0 0 CKAM0343 0 0 3.31 7.75 10.1186/s12870-015-0491-8 NA NA t3827.T001048 4 Days to Flowering Bi-parental analysis Segregants F2 M3487_Scaffold4867_413652 NA 0 0 0 0 374.521 13.7363400822886 10.1002/tpg2.20408 NA NA t3827.T001049 4 Days to Flowering Bi-parental analysis Segregants F2 M360_Ca2_19186863 NA 0 0 0 0 152.546 9.57046245971867 10.1002/tpg2.20408 NA NA t3827.T001050 4 Days to Flowering Bi-parental analysis Segregants F2 M432_Ca2_31492430 NA 0 0 0 0 203.737 4.01813697545052 10.1002/tpg2.20408 NA NA t3827.T001051 4 Days to Flowering Bi-parental analysis Segregants F2 M2098_Ca7_44783193 NA 0 0 0 0 0 15.8107735361013 10.1002/tpg2.20408 NA NA t3827.T001052 4 Days to Flowering Bi-parental analysis Segregants F2 M662_Scaffold5166_118450 NA 0 0 0 0 109 4.67362092206565 10.1002/tpg2.20408 NA NA t3827.T001053 4 Days to Flowering Bi-parental analysis Segregants F2 M1375_Ca5_7839530 NA 0 0 0 0 5 4.34252595798825 10.1002/tpg2.20408 NA NA t3827.T001054 4 Days to Flowering Bi-parental analysis Segregants F2 M25896_Ca6_44435171 NA 0 0 0 0 0 5.25880673688124 10.1002/tpg2.20408 NA NA t3827.T001055 4 Days to Flowering Bi-parental analysis Segregants F2 M2956_Scaffold5165_249519 NA 0 0 0 0 1434 4.17856990127468 10.1002/tpg2.20408 NA NA t3827.T001056 4 Days to Flowering Bi-parental analysis Segregants F2 M615_Ca3_38183517 NA 0 0 0 0 176 22.7884866854583 10.1002/tpg2.20408 NA NA t3827.T001057 4 Days to Flowering Bi-parental analysis Segregants F2 M685_Ca3_35015931 NA 0 0 0 0 198.033 19.6591738957072 10.1002/tpg2.20408 NA NA t3827.T001058 4 Days to Flowering Bi-parental analysis Segregants F2 M802_Ca3_34915900 NA 0 0 0 0 2215 18.734088877683 10.1002/tpg2.20408 NA NA t3827.T001059 4 Days to Flowering Bi-parental analysis Segregants F2 M665_Ca3_35826682 NA 0 0 0 0 273 26.642307922782 10.1002/tpg2.20408 NA NA t3827.T001060 4 Days to Flowering Bi-parental analysis Segregants F2 M147_Ca3_34382344 NA 0 0 0 0 348 30.6820201142681 10.1002/tpg2.20408 NA NA t3827.T001061 4 Days to Flowering Bi-parental analysis Segregants F2 M410_Ca3_34975027 NA 0 0 0 0 437.567 10.3372611065259 10.1002/tpg2.20408 NA NA t3827.T001062 4 Days to Flowering Bi-parental analysis Segregants F2 M677_Ca3_37054400 NA 0 0 0 0 498 19.2811368726413 10.1002/tpg2.20408 NA NA t3827.T001063 4 Days to Flowering Bi-parental analysis Segregants F2 M685_Ca3_35110503 NA 0 0 0 0 535.883 22.0815538901894 10.1002/tpg2.20408 NA NA t3827.T001064 4 Days to Flowering Bi-parental analysis Segregants F2 M808_Ca3_34975027 NA 0 0 0 0 599 30.2837125530246 10.1002/tpg2.20408 NA NA t3827.T001065 4 Days to Flowering Bi-parental analysis Segregants F2 M2929__0 NA 0 0 0 0 878.647 4.25792086142234 10.1002/tpg2.20408 NA NA t3827.T001066 4 Days to Flowering Bi-parental analysis Segregants F2 M668_Ca3_35527240 NA 0 0 0 0 95 27.9851386766665 10.1002/tpg2.20408 NA NA t3827.T001067 4 Days to Flowering Bi-parental analysis Segregants F2 M639_Ca3_32420199 NA 0 0 0 0 0 14.0426314421848 10.1002/tpg2.20408 NA NA t3827.T001068 4 Days to Flowering Bi-parental analysis Segregants F2 M122_Ca3_4163282 NA 0 0 0 0 0 7.2941654165147 10.1002/tpg2.20408 NA NA t3827.T001069 4 Days to Flowering Bi-parental analysis Segregants F2 M2749__0 NA 0 0 0 0 118.456 5.2444392448712 10.1002/tpg2.20408 NA NA t3827.T001070 4 Days to Flowering Bi-parental analysis Segregants F2 M2444_Ca7_46254355 NA 0 0 0 0 1191.842 4.39913362929498 10.1002/tpg2.20408 NA NA t3827.T001071 4 Days to Flowering Bi-parental analysis Segregants F2 M618_Ca3_34975027 NA 0 0 0 0 171 40.11072921 10.1002/tpg2.20408 NA NA t3827.T001072 4 Days to Flowering Bi-parental analysis Segregants F2 M583_Ca3_33534820 NA 0 0 0 0 3 22.3217772865499 10.1002/tpg2.20408 NA NA t3827.T001073 4 Days to Flowering Bi-parental analysis Segregants F2 M658_Ca3_32420199 NA 0 0 0 0 374 20.4828237033849 10.1002/tpg2.20408 NA NA t3827.T001074 4 Days to Flowering Bi-parental analysis Segregants F2 M703_Ca3_35459079 NA 0 0 0 0 381.983 28.4039885051579 10.1002/tpg2.20408 NA NA t3827.T001075 4 Days to Flowering Bi-parental analysis Segregants F2 M586_Ca3_35449568 NA 0 0 0 0 400 32.8507971096036 10.1002/tpg2.20408 NA NA t3827.T001076 4 Days to Flowering Bi-parental analysis Segregants F2 M641_Ca3_34921315 NA 0 0 0 0 413 20.2544512234389 10.1002/tpg2.20408 NA NA t3827.T001077 4 Days to Flowering Bi-parental analysis Segregants F2 M679_Ca3_35568720 NA 0 0 0 0 475 19.8987956375839 10.1002/tpg2.20408 NA NA t3827.T001078 4 Days to Flowering Bi-parental analysis Segregants F2 M646_Ca3_35469349 NA 0 0 0 0 478 10.9468560204565 10.1002/tpg2.20408 NA NA t3827.T001079 4 Days to Flowering Bi-parental analysis Segregants F2 M648_Ca3_34929230 NA 0 0 0 0 490 22.1405358282063 10.1002/tpg2.20408 NA NA t3827.T001080 4 Days to Flowering Bi-parental analysis Segregants F2 M688_Ca3_34975027 NA 0 0 0 0 558 44.8813294414314 10.1002/tpg2.20408 NA NA t3827.T001081 4 Days to Flowering Bi-parental analysis Segregants F2 M2844__0 NA 0 0 0 0 607.646 11.5790813601419 10.1002/tpg2.20408 NA NA t3827.T001082 4 Days to Flowering Bi-parental analysis Segregants F2 M805_Ca3_34915900 NA 0 0 0 0 613 60.9494770090971 10.1002/tpg2.20408 NA NA t3827.T001083 4 Days to Flowering Bi-parental analysis Segregants F2 M2544_Ca7_54547383 NA 0 0 0 0 654.101 4.03378179748121 10.1002/tpg2.20408 NA NA t3827.T001084 4 Days to Flowering Bi-parental analysis Segregants F2 M647_Ca3_35295896 NA 0 0 0 0 666 18.591467751056 10.1002/tpg2.20408 NA NA t3827.T001085 4 Days to Flowering Bi-parental analysis Segregants F2 M649_Ca3_34102904 NA 0 0 0 0 707.974 10.3347246163583 10.1002/tpg2.20408 NA NA t3827.T001086 4 Days to Flowering Bi-parental analysis Segregants F2 M728_Ca3_41655642 NA 0 0 0 0 0 10.4769143101415 10.1002/tpg2.20408 NA NA t3827.T001087 4 Days to Flowering Bi-parental analysis Segregants F2 M141_Ca3_32276013 NA 0 0 0 0 0 9.60845044787638 10.1002/tpg2.20408 NA NA t3827.T001088 4 Days to Flowering Bi-parental analysis Segregants F2 M682_Ca3_40351219 NA 0 0 0 0 331 10.3209268433497 10.1002/tpg2.20408 NA NA t3827.T001089 4 Days to Flowering Bi-parental analysis Segregants F2 M1271_Ca4_13354533 NA 0 0 0 0 663.961 5.98188495414178 10.1002/tpg2.20408 NA NA t3827.T001090 4 Days to Flowering Bi-parental analysis Segregants F2 M2770__0 NA 0 0 0 0 134.882 18.4284084923586 10.1002/tpg2.20408 NA NA t3827.T001091 4 Days to Flowering Bi-parental analysis Segregants F2 M657_Ca3_35811343 NA 0 0 0 0 202 23.4939491620447 10.1002/tpg2.20408 NA NA t3827.T001092 4 Days to Flowering Bi-parental analysis Segregants F2 M2820_Ca5_63274730 NA 0 0 0 0 222 4.94067071538329 10.1002/tpg2.20408 NA NA t3827.T001093 4 Days to Flowering Bi-parental analysis Segregants F2 M440_Ca6_12409619 NA 0 0 0 0 53 6.80981380597527 10.1002/tpg2.20408 NA NA t3827.T001094 4 Days to Flowering Bi-parental analysis Segregants F2 M1502_Ca3_35015931 NA 0 0 0 0 256 54.4844058307796 10.1002/tpg2.20408 NA NA t3827.T001095 4 Days to Flowering Bi-parental analysis Segregants F2 M1106_Ca4_16928513 NA 0 0 0 0 577 4.46701457399107 10.1002/tpg2.20408 NA NA t3827.T001096 4 Days to Flowering Bi-parental analysis Segregants F2 M826_Ca2_35425138 NA 0 0 0 0 760 26.8745609801887 10.1002/tpg2.20408 NA NA t3827.T001097 4 Days to Flowering Bi-parental analysis Segregants F2 M2969__0 NA 0 0 0 0 1 4.95088424188648 10.1002/tpg2.20408 NA NA t3827.T001098 4 Days to Flowering Bi-parental analysis Segregants F2 M2531_Ca6_44435171 NA 0 0 0 0 12.058 7.90745830837374 10.1002/tpg2.20408 NA NA t3827.T001099 4 Days to Flowering Bi-parental analysis Segregants F2 M2507_Ca8_6557586 NA 0 0 0 0 2 4.10428869711731 10.1002/tpg2.20408 NA NA t3827.T001100 4 Days to Flowering Bi-parental analysis Segregants F2 M1500_Ca5_21149625 NA 0 0 0 0 439 5.71214502578773 10.1002/tpg2.20408 NA NA t3827.T001101 4 Days to Flowering Bi-parental analysis Segregants F2 M3271_Ca6_19274384 NA 0 0 0 0 63 5.49785099219519 10.1002/tpg2.20408 NA NA t3827.T001102 4 Days to Flowering Bi-parental analysis Segregants F2 M2633_Ca7_42906105 NA 0 0 0 0 1 12.7148805090993 10.1002/tpg2.20408 NA NA t3827.T001103 4 Days to Flowering Bi-parental analysis Segregants F2 M2992__0 NA 0 0 0 0 291.909 4.43741286469232 10.1002/tpg2.20408 NA NA t3827.T001104 4 Days to Flowering Bi-parental analysis Segregants F2 M2682_Ca8_6557586 NA 0 0 0 0 404 7.11029878149962 10.1002/tpg2.20408 NA NA t3827.T001105 4 Days to Flowering Bi-parental analysis Segregants F2 M551_Ca3_32420199 NA 0 0 0 0 0 14.6358329785117 10.1002/tpg2.20408 NA NA t3827.T001106 CaDFI_LS6.1 4 Days to flowering initiation composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA6_43908965 NA 0 0 SCA6_39028647 0 0 37.11 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001107 CaDFI_LS6.1 4 Days to flowering initiation composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA6_43908965 NA 0 0 SCA6_39028647 0 0 37.11 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001108 CaDFI_LS8.1 4 Days to flowering initiation composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA8_7197652 NA 0 0 SCA8_14126483 0 0 42.71 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001109 CaDFI_LS8.1 4 Days to flowering initiation composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA8_7197652 NA 0 0 SCA8_14126483 0 0 42.71 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001110 qdfi-01 4 Days to flowering initiation composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021160.1.35885685 NA 1 0 0 CNC_021160.1.8023246 0 0 3.59 10.1371/journal.pone.0254957 NA NA t3827.T001111 qdfi-01 4 Days to flowering initiation composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021160.1.35885685 NA 1 0 0 CNC_021160.1.8023246 0 0 5.39 10.1371/journal.pone.0254957 NA NA t3827.T001112 qdfi-02 4 Days to flowering initiation composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021163.1.11351378 NA 4 0 0 CNC_021163.1.11351447 0 0 3.19 10.1371/journal.pone.0254957 NA NA t3827.T001113 qdfi-02 4 Days to flowering initiation composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021163.1.11351378 NA 4 0 0 CNC_021163.1.11351447 0 0 3.88 10.1371/journal.pone.0254957 NA NA t3827.T001114 MTA_at_CESSR50 4 Days to flowering initiation (DFI) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet CESSR50 NA 0 0 0 0 0.00763 33707355 NA NA t3827.T001115 MTA_at_GA11 4 Days to flowering initiation (DFI) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet GA11 NA 0 0 0 0 0.000292 33707355 NA NA t3827.T001116 MTA_at_NCPGR150 4 Days to flowering initiation (DFI) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR150 NA 0 0 0 0 0.00191 33707355 NA NA t3827.T001117 MTA_at_NCPGR150 4 Days to flowering initiation (DFI) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR150 NA 0 0 0 0 0.00481 33707355 NA NA t3827.T001118 MTA_at_NCPGR150 4 Days to flowering initiation (DFI) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR150 NA 0 0 0 0 0.00514 33707355 NA NA t3827.T001119 MTA_at_NCPGR202 4 Days to flowering initiation (DFI) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR202 NA 0 0 0 0 0.000581 33707355 NA NA t3827.T001120 MTA_at_NCPGR41 4 Days to flowering initiation (DFI) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR41 NA 0 0 0 0 0.00288 33707355 NA NA t3827.T001121 MTA_at_TA80 4 Days to flowering initiation (DFI) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet TA80 NA 0 0 0 0 0.00802 33707355 NA NA t3827.T001122 qdg-01 4 Days to germination composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021164.1.40739029 NA 5 0 0 CNC_021164.1.39765508 0 0 3.53 10.1371/journal.pone.0254957 NA NA t3827.T001123 qdg-01 4 Days to germination composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021166.1.28474588 NA 7 0 0 CNC_021166.1.8118822 0 0 4.2 10.1371/journal.pone.0254957 NA NA t3827.T001124 qdg-02 4 Days to germination composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021165.1.18056125 NA 6 0 0 CNC_021165.1.513774 0 0 2.93 10.1371/journal.pone.0254957 NA NA t3827.T001125 qdg-02 4 Days to germination composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021165.1.18056125 NA 6 0 0 CNC_021165.1.513774 0 0 5.27 10.1371/journal.pone.0254957 NA NA t3827.T001126 qdg-03 4 Days to germination composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021166.1.28474588 NA 7 0 0 CNC_021166.1.8118822 0 0 2.3 10.1371/journal.pone.0254957 NA NA t3827.T001127 4 Days to maturity ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_7_12870961 NA CaLG07 14380 0 bin_7_12856579 0 0 0.23 19.53 10.1038/srep15296 NA NA t3827.T001128 4 Days to maturity Interval mapping ICCV 2 × JG 11 F8 CaM1301 NA 0 0 CKAM1971 0 0 39.11 40.76 10.1186/s12870-015-0491-8 NA NA t3827.T001129 4 Days to maturity Interval mapping ICCV 2 × JG 11 F8 ICCM0293 NA 0 0 CKAM0707 0 0 1.01 27.99 10.1186/s12870-015-0491-8 NA NA t3827.T001130 4 Days to maturity Interval mapping ICCV 2 × JG 11 F8 CKAM0003 NA 0 0 CKAM1003 0 0 124.31 30.34 10.1186/s12870-015-0491-8 NA NA t3827.T001131 4 Days to maturity Interval mapping ICCV 2 × JG 11 F8 CKAM0003 NA 0 0 CKAM1003 0 0 124.31 39.19 10.1186/s12870-015-0491-8 NA NA t3827.T001132 4 Days to maturity Interval mapping ICCV 2 × JG 11 F8 CaM0463 NA 0 0 ICCM272 0 0 71.31 28.95 10.1186/s12870-015-0491-8 NA NA t3827.T001133 4 Days to maturity Interval mapping ICCV 2 × JG 11 F8 CaM0463 NA 0 0 ICCM272 0 0 72.31 16.16 10.1186/s12870-015-0491-8 NA NA t3827.T001134 4 Days to maturity Interval mapping ICCV 2 × JG 11 F8 CaM0463 NA 0 0 ICCM272 0 0 72.31 19.06 10.1186/s12870-015-0491-8 NA NA t3827.T001135 4 Days to maturity Interval mapping ICCV 2 × JG 11 F8 CaM2031 NA 0 0 CKAM0165 0 0 20.31 4.01 10.1186/s12870-015-0491-8 NA NA t3827.T001136 4 Days to maturity Interval mapping ICCV 2 × JG 11 F8 CKAM1903 NA 0 0 CKAM0343 0 0 0.01 3.6 10.1186/s12870-015-0491-8 NA NA t3827.T001137 4 Days to maturity Interval mapping ICCV 2 × JG 11 F8 CKAM1903 NA 0 0 CKAM0343 0 0 3.31 31.87 10.1186/s12870-015-0491-8 NA NA t3827.T001138 4 Days to maturity Interval mapping ICCV 2 × JG 11 F8 CKAM1903 NA 0 0 CKAM0343 0 0 3.31 43.32 10.1186/s12870-015-0491-8 NA NA t3827.T001139 4 Days to maturity Interval mapping ICCV 2 × JG 11 F8 CaM0812 NA 0 0 CKAM0647 0 0 38.61 29.8 10.1186/s12870-015-0491-8 NA NA t3827.T001140 4 Days to maturity Interval mapping ICCV 96029 × CDC Frontier RIL CAV1SC48.1P396061 NA 0 0 0 0 7.4 5.4 10.1139/gen-2016-0036 NA NA t3827.T001141 4 Days to maturity Interval mapping ICCV 96029 × CDC Frontier RIL scaffold1567p981540 NA 0 0 0 0 2 3.3 10.1139/gen-2016-0036 NA NA t3827.T001142 CaDM_LS1.1 4 Days to maturity composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA1_888 NA 0 0 SCA1_30956998 0 0 7.11 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001143 CaDM_LS1.2 4 Days to maturity composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA1_19586410 NA 0 0 SCA1_19572921 0 0 152.61 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001144 CaDM_LS1.3 4 Days to maturity composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA1_11502160 NA 0 0 SCA1_19572921 0 0 154.81 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001145 4 Days to maturity ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_2_30506636 NA 0 0 bin_2_30527477 0 0 3.6669 10.1038/srep15296 NA NA t3827.T001146 4 Days to maturity ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA 0 0 bin_4_13378761 0 0 7.742 10.1038/srep15296 NA NA t3827.T001147 4 Days to maturity ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_5_45473300 NA 0 0 bin_5_45530795 0 0 3.0367 10.1038/srep15296 NA NA t3827.T001148 4 Days to maturity ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_5_30232785 NA 0 0 bin_5_30210335 0 0 3.1999 10.1038/srep15296 NA NA t3827.T001149 4 Days to maturity ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_5_45473300 NA 0 0 bin_5_45530795 0 0 3.2527 10.1038/srep15296 NA NA t3827.T001150 4 Days to maturity ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_5_45473300 NA 0 0 bin_5_45530795 0 0 4.2725 10.1038/srep15296 NA NA t3827.T001151 4 Days to maturity ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_6_8283807 NA 0 0 bin_6_8299950 0 0 3.2084 10.1038/srep15296 NA NA t3827.T001152 4 Days to maturity ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_6_6943324 NA 0 0 bin_6_6999653 0 0 3.5091 10.1038/srep15296 NA NA t3827.T001153 4 Days to maturity ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_6_3677353 NA 0 0 bin_6_3683132 0 0 3.9894 10.1038/srep15296 NA NA t3827.T001154 4 Days to maturity ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_7_12870961 NA 0 0 bin_7_12856579 0 0 19.5279 10.1038/srep15296 NA NA t3827.T001155 4 Days to maturity ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_7_29276309 NA 0 0 bin_7_29967944 0 0 3.0077 10.1038/srep15296 NA NA t3827.T001156 4 Days to maturity ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_7_12389184 NA 0 0 bin_7_12378886 0 0 3.5998 10.1038/srep15296 NA NA t3827.T001157 4 Days to maturity ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_4015752 NA 0 0 bin_8_3992475 0 0 10.4049 10.1038/srep15296 NA NA t3827.T001158 4 Days to maturity ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_4015752 NA 0 0 bin_8_3992475 0 0 10.604 10.1038/srep15296 NA NA t3827.T001159 4 Days to maturity ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_4015752 NA 0 0 bin_8_3992475 0 0 11.14 10.1038/srep15296 NA NA t3827.T001160 4 Days to maturity ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 12.2605 10.1038/srep15296 NA NA t3827.T001161 4 Days to maturity ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 17.9681 10.1038/srep15296 NA NA t3827.T001162 4 Days to maturity ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 20.6648 10.1038/srep15296 NA NA t3827.T001163 4 Days to maturity ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 21.3689 10.1038/srep15296 NA NA t3827.T001164 4 Days to maturity ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_4015752 NA 0 0 bin_8_3992475 0 0 5.0805 10.1038/srep15296 NA NA t3827.T001165 4 Days to maturity ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 6.0829 10.1038/srep15296 NA NA t3827.T001166 4 Days to maturity ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 6.9933 10.1038/srep15296 NA NA t3827.T001167 4 Days to maturity ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 7.1827 10.1038/srep15296 NA NA t3827.T001168 4 Days to maturity ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 8.5973 10.1038/srep15296 NA NA t3827.T001169 4 Days to maturity ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_4015752 NA 0 0 bin_8_3992475 0 0 9.1368 10.1038/srep15296 NA NA t3827.T001170 4 Days to maturity Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13687456 NA 0 0 NCPGR21 0 0 5.13900000000001 8.67101 10.1007/s00438-014-0932-3 NA NA t3827.T001171 4 Days to maturity Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 CISR80 0 0 15.125000000000007 12.807818 10.1007/s00438-014-0932-3 NA NA t3827.T001172 4 Days to maturity Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 CISR80 0 0 15.125000000000007 17.0076 10.1007/s00438-014-0932-3 NA NA t3827.T001173 4 Days to maturity Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 CISR80 0 0 15.125000000000007 7.415852 10.1007/s00438-014-0932-3 NA NA t3827.T001174 4 Days to maturity Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 CISR80 0 0 15.125000000000007 9.583062 10.1007/s00438-014-0932-3 NA NA t3827.T001175 4 Days to maturity Interval mapping ICC 4958 × ICC 1882 RIL CISR80 NA 0 0 Ca8_714974 0 0 5.680999999999997 5.62215 10.1007/s00438-014-0932-3 NA NA t3827.T001176 4 Days to maturity Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 Ca8_3050452 0 0 7.330999999999996 11.0076 10.1007/s00438-014-0932-3 NA NA t3827.T001177 4 Days to maturity Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 Ca8_3050452 0 0 7.330999999999996 11.359392 10.1007/s00438-014-0932-3 NA NA t3827.T001178 4 Days to maturity Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 Ca8_3050452 0 0 7.330999999999996 12.942454 10.1007/s00438-014-0932-3 NA NA t3827.T001179 4 Days to maturity Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 Ca8_3050452 0 0 7.330999999999996 21.324647 10.1007/s00438-014-0932-3 NA NA t3827.T001180 4 Days to maturity Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 Ca8_3050452 0 0 7.330999999999996 22.67101 10.1007/s00438-014-0932-3 NA NA t3827.T001181 4 Days to maturity Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 Ca8_3050452 0 0 7.330999999999996 23.200869 10.1007/s00438-014-0932-3 NA NA t3827.T001182 4 Days to maturity Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 Ca8_3050452 0 0 7.330999999999996 30.008686 10.1007/s00438-014-0932-3 NA NA t3827.T001183 4 Days to maturity Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 Ca8_3050452 0 0 7.330999999999996 33.344191 10.1007/s00438-014-0932-3 NA NA t3827.T001184 4 Days to maturity Interval mapping ICC 4958 × ICC 1882 RIL CaM0812 NA 0 0 NCPGR164 0 0 8.805999999999997 14.523344 10.1007/s00438-014-0932-3 NA NA t3827.T001185 4 Days to maturity Interval mapping ICC 4958 × ICC 1882 RIL CaM0812 NA 0 0 NCPGR164 0 0 8.805999999999997 18.162866 10.1007/s00438-014-0932-3 NA NA t3827.T001186 4 Days to maturity Interval mapping ICC 4958 × ICC 1882 RIL CaM0812 NA 0 0 NCPGR164 0 0 8.805999999999997 5.344191 10.1007/s00438-014-0932-3 NA NA t3827.T001187 4 Days to maturity Interval mapping ICC 4958 × ICC 1882 RIL CaM0812 NA 0 0 NCPGR164 0 0 8.805999999999997 7.659066 10.1007/s00438-014-0932-3 NA NA t3827.T001188 4 Days to maturity Interval mapping ICC 4958 × ICC 1882 RIL CaM0812 NA 0 0 NCPGR164 0 0 8.805999999999997 9.400651 10.1007/s00438-014-0932-3 NA NA t3827.T001189 MTA_at_H4F07 4 Days to maturity (DM) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet H4F07 NA 0 0 0 0 0.01221 33707355 NA NA t3827.T001190 MTA_at_ICCeM018 4 Days to maturity (DM) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet ICCeM018 NA 0 0 0 0 0.000453 33707355 NA NA t3827.T001191 MTA_at_NCPGR110 4 Days to maturity (DM) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR110 NA 0 0 0 0 0.00169 33707355 NA NA t3827.T001192 MTA_at_NCPGR202 4 Days to maturity (DM) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR202 NA 0 0 0 0 0.00525 33707355 NA NA t3827.T001193 MTA_at_NCPGR6 4 Days to maturity (DM) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR6 NA 0 0 0 0 0.00204 33707355 NA NA t3827.T001194 MTA_at_TS54 4 Days to maturity (DM) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet TS54 NA 0 0 0 0 5.42e-05 33707355 NA NA t3827.T001195 4 Days to flowering Interval mapping ICCV 96029 × CDC Frontier RIL CAV1SC48.1P396061 NA 0 0 0 0 7.4 5.3 10.1139/gen-2016-0036 NA NA t3827.T001196 4 Days to flowering Interval mapping ICCV 96029 × CDC Frontier RIL scaffold360p479554 NA 0 0 0 0 15.5 5.7 10.1139/gen-2016-0036 NA NA t3827.T001197 4 Days to flowering Interval mapping ICCV 96029 × CDC Frontier RIL scaffold34p1977386 NA 0 0 0 0 3.01 5.7 10.1139/gen-2016-0036 NA NA t3827.T001198 4 Days to flowering Interval mapping ICCV 96029 × CDC Frontier RIL CAV1SC2.1P566504 NA 0 0 0 0 31.48 3.8 10.1139/gen-2016-0036 NA NA t3827.T001199 4 Days to flowering Interval mapping ICCV 96029 × CDC Frontier RIL scaffold2005p25023 NA 0 0 0 0 51.9 3.1 10.1139/gen-2016-0036 NA NA t3827.T001200 4 Days to flowering Interval mapping ICCV 96029 × CDC Frontier RIL CAV1SC1.1p4940145 NA 0 0 0 0 61 18 10.1139/gen-2016-0036 NA NA t3827.T001201 4 Days to flowering Interval mapping ICCV 96029 × CDC Frontier RIL scaffold937p67148 NA 0 0 0 0 53.8 4.3 10.1139/gen-2016-0036 NA NA t3827.T001202 MTA_at_GA11 4 Days to pod filling (DPF) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet GA11 NA 0 0 0 0 0.00332 33707355 NA NA t3827.T001203 MTA_at_NCPGR202 4 Days to pod filling (DPF) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR202 NA 0 0 0 0 0.000968 33707355 NA NA t3827.T001204 MTA_at_NCPGR41 4 Days to pod filling (DPF) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR41 NA 0 0 0 0 0.00298 33707355 NA NA t3827.T001205 MTA_at_STMS4 4 Days to pod filling (DPF) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet STMS4 NA 0 0 0 0 0.00888 33707355 NA NA t3827.T001206 MTA_at_TA110 4 Days to pod filling (DPF) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet TA110 NA 0 0 0 0 0.00454 33707355 NA NA t3827.T001207 MTA_at_GA11 4 Days to pod initiation (DPI) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet GA11 NA 0 0 0 0 0.000211 33707355 NA NA t3827.T001208 MTA_at_NCPGR150 4 Days to pod initiation (DPI) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR150 NA 0 0 0 0 0.00215 33707355 NA NA t3827.T001209 MTA_at_NCPGR202 4 Days to pod initiation (DPI) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR202 NA 0 0 0 0 0.000367 33707355 NA NA t3827.T001210 MTA_at_NCPGR202 4 Days to pod initiation (DPI) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR202 NA 0 0 0 0 0.000412 33707355 NA NA t3827.T001211 MTA_at_NCPGR41 4 Days to pod initiation (DPI) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR41 NA 0 0 0 0 0.001 33707355 NA NA t3827.T001212 MTA_at_STMS4 4 Days to pod initiation (DPI) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet STMS4 NA 0 0 0 0 0.00592 33707355 NA NA t3827.T001213 MTA_at_TA110 4 Days to pod initiation (DPI) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet TA110 NA 0 0 0 0 0.00593 33707355 NA NA t3827.T001214 4 Days to Podding Bi-parental analysis Segregants F2 M304_Ca1_39617700 NA 0 0 0 0 29.211 4.28288125537308 10.1002/tpg2.20408 NA NA t3827.T001215 4 Days to Podding Bi-parental analysis Segregants F2 M3425_Scaffold0592_68507 NA 0 0 0 0 351.245 8.32195873517316 10.1002/tpg2.20408 NA NA t3827.T001216 4 Days to Podding Bi-parental analysis Segregants F2 M360_Ca2_19186863 NA 0 0 0 0 152.546 8.78050931424366 10.1002/tpg2.20408 NA NA t3827.T001217 4 Days to Podding Bi-parental analysis Segregants F2 M343_Ca2_15521666 NA 0 0 0 0 509 4.85782301854069 10.1002/tpg2.20408 NA NA t3827.T001218 4 Days to Podding Bi-parental analysis Segregants F2 M2098_Ca7_44783193 NA 0 0 0 0 0 6.25896407483465 10.1002/tpg2.20408 NA NA t3827.T001219 4 Days to Podding Bi-parental analysis Segregants F2 M595_Ca8_1647811 NA 0 0 0 0 343.323 5.9771401433469 10.1002/tpg2.20408 NA NA t3827.T001220 4 Days to Podding Bi-parental analysis Segregants F2 M661_Ca3_35390502 NA 0 0 0 0 105 11.2496232646957 10.1002/tpg2.20408 NA NA t3827.T001221 4 Days to Podding Bi-parental analysis Segregants F2 M2890__0 NA 0 0 0 0 161 4.01281256947781 10.1002/tpg2.20408 NA NA t3827.T001222 4 Days to Podding Bi-parental analysis Segregants F2 M615_Ca3_38183517 NA 0 0 0 0 176 16.1596006542166 10.1002/tpg2.20408 NA NA t3827.T001223 4 Days to Podding Bi-parental analysis Segregants F2 M665_Ca3_35826682 NA 0 0 0 0 274 27.1233101787828 10.1002/tpg2.20408 NA NA t3827.T001224 4 Days to Podding Bi-parental analysis Segregants F2 M147_Ca3_34382344 NA 0 0 0 0 347 24.0812956066462 10.1002/tpg2.20408 NA NA t3827.T001225 4 Days to Podding Bi-parental analysis Segregants F2 M410_Ca3_34975027 NA 0 0 0 0 436 7.56108113116601 10.1002/tpg2.20408 NA NA t3827.T001226 4 Days to Podding Bi-parental analysis Segregants F2 M677_Ca3_37054400 NA 0 0 0 0 499.333 20.1106903477262 10.1002/tpg2.20408 NA NA t3827.T001227 4 Days to Podding Bi-parental analysis Segregants F2 M700_Ca3_35569310 NA 0 0 0 0 527 10.9016990640988 10.1002/tpg2.20408 NA NA t3827.T001228 4 Days to Podding Bi-parental analysis Segregants F2 M808_Ca3_34975027 NA 0 0 0 0 601 19.2298259481976 10.1002/tpg2.20408 NA NA t3827.T001229 4 Days to Podding Bi-parental analysis Segregants F2 M122_Ca3_4163282 NA 0 0 0 0 0 5.3105464255774 10.1002/tpg2.20408 NA NA t3827.T001230 4 Days to Podding Bi-parental analysis Segregants F2 M639_Ca3_32420199 NA 0 0 0 0 0 5.56974161943622 10.1002/tpg2.20408 NA NA t3827.T001231 4 Days to Podding Bi-parental analysis Segregants F2 M618_Ca3_34975027 NA 0 0 0 0 171 25.61140634 10.1002/tpg2.20408 NA NA t3827.T001232 4 Days to Podding Bi-parental analysis Segregants F2 M2625_Scaffold0996_83841 NA 0 0 0 0 197 5.96250691826105 10.1002/tpg2.20408 NA NA t3827.T001233 4 Days to Podding Bi-parental analysis Segregants F2 M658_Ca3_32420199 NA 0 0 0 0 371 14.8259873957829 10.1002/tpg2.20408 NA NA t3827.T001234 4 Days to Podding Bi-parental analysis Segregants F2 M703_Ca3_35459079 NA 0 0 0 0 382 36.1641813311369 10.1002/tpg2.20408 NA NA t3827.T001235 4 Days to Podding Bi-parental analysis Segregants F2 M586_Ca3_35449568 NA 0 0 0 0 400 20.7687474835113 10.1002/tpg2.20408 NA NA t3827.T001236 4 Days to Podding Bi-parental analysis Segregants F2 M633_Ca3_34038421 NA 0 0 0 0 411 12.7167442473165 10.1002/tpg2.20408 NA NA t3827.T001237 4 Days to Podding Bi-parental analysis Segregants F2 M674_Ca3_35449568 NA 0 0 0 0 455.756 12.3478253537939 10.1002/tpg2.20408 NA NA t3827.T001238 4 Days to Podding Bi-parental analysis Segregants F2 M648_Ca3_34929230 NA 0 0 0 0 490 11.040380847889 10.1002/tpg2.20408 NA NA t3827.T001239 4 Days to Podding Bi-parental analysis Segregants F2 M583_Ca3_33534820 NA 0 0 0 0 5 17.1604108554338 10.1002/tpg2.20408 NA NA t3827.T001240 4 Days to Podding Bi-parental analysis Segregants F2 M650_Ca3_32719699 NA 0 0 0 0 559 34.1683281334971 10.1002/tpg2.20408 NA NA t3827.T001241 4 Days to Podding Bi-parental analysis Segregants F2 M3660__0 NA 0 0 0 0 593.117 8.4949803566714 10.1002/tpg2.20408 NA NA t3827.T001242 4 Days to Podding Bi-parental analysis Segregants F2 M567_Ca3_33634584 NA 0 0 0 0 621.79 12.422049954738 10.1002/tpg2.20408 NA NA t3827.T001243 4 Days to Podding Bi-parental analysis Segregants F2 M632_Ca3_34097708 NA 0 0 0 0 664.791 19.3787264973043 10.1002/tpg2.20408 NA NA t3827.T001244 4 Days to Podding Bi-parental analysis Segregants F2 M649_Ca3_34102904 NA 0 0 0 0 707.974 5.01762592827759 10.1002/tpg2.20408 NA NA t3827.T001245 4 Days to Podding Bi-parental analysis Segregants F2 M141_Ca3_32276013 NA 0 0 0 0 0 6.91178709636392 10.1002/tpg2.20408 NA NA t3827.T001246 4 Days to Podding Bi-parental analysis Segregants F2 M728_Ca3_41655642 NA 0 0 0 0 0 8.77241064837762 10.1002/tpg2.20408 NA NA t3827.T001247 4 Days to Podding Bi-parental analysis Segregants F2 M679_Ca3_40088365 NA 0 0 0 0 332 10.198491132241 10.1002/tpg2.20408 NA NA t3827.T001248 4 Days to Podding Bi-parental analysis Segregants F2 M2770__0 NA 0 0 0 0 134.882 13.2849731674184 10.1002/tpg2.20408 NA NA t3827.T001249 4 Days to Podding Bi-parental analysis Segregants F2 M653_Ca3_35569310 NA 0 0 0 0 211 17.4720761953126 10.1002/tpg2.20408 NA NA t3827.T001250 4 Days to Podding Bi-parental analysis Segregants F2 M1329_Ca3_49533116 NA 0 0 0 0 491.504 4.63106281842532 10.1002/tpg2.20408 NA NA t3827.T001251 4 Days to Podding Bi-parental analysis Segregants F2 M1502_Ca3_35015931 NA 0 0 0 0 256 11.3837035430132 10.1002/tpg2.20408 NA NA t3827.T001252 4 Days to Podding Bi-parental analysis Segregants F2 M809_Ca2_33545641 NA 0 0 0 0 798 17.5766332381484 10.1002/tpg2.20408 NA NA t3827.T001253 4 Days to Podding Bi-parental analysis Segregants F2 M2969__0 NA 0 0 0 0 1 5.43061577093147 10.1002/tpg2.20408 NA NA t3827.T001254 4 Days to Podding Bi-parental analysis Segregants F2 M2633_Ca7_42906105 NA 0 0 0 0 2 6.64382907094518 10.1002/tpg2.20408 NA NA t3827.T001255 4 Days to Podding Bi-parental analysis Segregants F2 M2707_Ca8_7325392 NA 0 0 0 0 379 5.5745605038624 10.1002/tpg2.20408 NA NA t3827.T001256 4 Days to Podding Bi-parental analysis Segregants F2 M2782_Ca8_9396515 NA 0 0 0 0 53.045 6.18194980456971 10.1002/tpg2.20408 NA NA t3827.T001257 4 Days to Podding Bi-parental analysis Segregants F2 M551_Ca3_32420199 NA 0 0 0 0 0 11.9531936778095 10.1002/tpg2.20408 NA NA t3827.T001258 CaCLV1_112 4 DTF (days to 50% flowering time) CMLM-based association mapping 92 desi and kabuli accessions accession SNP8322Ca(T/A)CaCLV1_112 NA Ca07 11109690 0 0 0 1e-09 10.1007/s00122-019-03335-y NA NA t3827.T001259 CaCLV1_112 4 DTF (days to 50% flowering time) CMLM-based association mapping 92 desi and kabuli accessions accession SNP8323Ca(A/T)CaCLV1_112 NA Ca07 11109693 0 0 0 1.2e-09 10.1007/s00122-019-03335-y NA NA t3827.T001260 CaCLV1_112 4 DTF (days to 50% flowering time) CMLM-based association mapping 92 desi and kabuli accessions accession 8324Ca(T/A)CaCLV1_112 NA Ca07 11109695 0 0 0 1e-09 10.1007/s00122-019-03335-y NA NA t3827.T001261 CaCLV1_112 4 DTF (days to 50% flowering time) composite interval mapping F7 RIL mapping population recombinant inbred line in F7 generation SNP8322Ca(T/A)CaCLV1_112 NA 7 10859907 0 SNP8323Ca(A/T)CaCLV1_112; SNP832 7 11393795 0 8.6 10.1007/s00122-019-03335-y NA NA t3827.T001262 CaCLV2_11 4 DTF (days to 50% flowering time) CMLM-based association mapping 92 desi and kabuli accessions accession SNP2583Ca(A/G)CaCLV2_11 NA Ca03 23828679 0 0 0 1e-10 10.1007/s00122-019-03335-y NA NA t3827.T001263 CaCLV2_11 4 DTF (days to 50% flowering time) composite interval mapping F7 RIL mapping population recombinant inbred line in F7 generation SNP2583Ca(A/G)CaCLV2_11 NA 3 23745324 0 3 24095268 0 10.7 10.1007/s00122-019-03335-y NA NA t3827.T001264 CaCLV3_01 4 DTF (days to 50% flowering time) CMLM-based association mapping 92 desi and kabuli accessions accession SNP0877Ca(T/C)CaCLV3_01 NA Ca01 14500953 0 0 0 1e-10 10.1007/s00122-019-03335-y NA NA t3827.T001265 CaCLV3_01 4 DTF (days to 50% flowering time) composite interval mapping F7 RIL mapping population recombinant inbred line in F7 generation SNP0877Ca(T/C)CaCLV3_01 NA 1 14500953 0 1 14884940 0 10.5 10.1007/s00122-019-03335-y NA NA t3827.T001266 CaCLV3_03 4 DTF (days to 50% flowering time) CMLM-based association mapping 92 desi and kabuli accessions accession SNP2732Ca(A/T)CaCLV3_03 NA Ca03 28437338 0 0 0 1.2e-10 10.1007/s00122-019-03335-y NA NA t3827.T001267 CaCLV3_03 4 DTF (days to 50% flowering time) CMLM-based association mapping 92 desi and kabuli accessions accession SNP2733Ca(T/A)CaCLV3_03 NA Ca03 28437340 0 0 0 1e-10 10.1007/s00122-019-03335-y NA NA t3827.T001268 CaCLV3_03 4 DTF (days to 50% flowering time) composite interval mapping F7 RIL mapping population recombinant inbred line in F7 generation SNP2732Ca(A/T)CaCLV3_03 NA 3 28374024 0 SNP2733Ca(T/A)CaCLV3_03 3 28716047 0 11.5 10.1007/s00122-019-03335-y NA NA t3827.T001269 QTL_on_Chr4 4 eT (Evapotranspiration) inclusive composite interval map RIL recombinant inbred line NA 4 11992806 0 4 12061305 0 40 3 10.1186/s12870-018-1245-1 NA NA t3827.T001270 QTL_on_Chr4 4 eT (Evapotranspiration) inclusive composite interval map RIL recombinant inbred line NA 4 12586721 0 4 12650792 0 42 3 10.1186/s12870-018-1245-1 NA NA t3827.T001271 QTL_on_Chr5 4 eT (Evapotranspiration) inclusive composite interval map RIL recombinant inbred line NA 5 41290102 0 5 41678447 0 54 2 10.1186/s12870-018-1245-1 NA NA t3827.T001272 QTL_on_Chr6 4 eT (Evapotranspiration) inclusive composite interval map RIL recombinant inbred line NA 6 55893751 0 6 54270280 0 121 2 10.1186/s12870-018-1245-1 NA NA t3827.T001273 QTL_on_LG4 4 eT (Evapotranspiration) composite interval mapping RIL recombinant inbred line CaM1903 NA 0 0 ICCM0249 0 0 53.31 3 10.1186/s12870-018-1245-1 NA NA t3827.T001274 QTL_on_LG4 4 eT (Evapotranspiration) composite interval mapping RIL recombinant inbred line ICCM0249 NA 0 0 NCPGR127 0 0 54.51 4 10.1186/s12870-018-1245-1 NA NA t3827.T001275 QTL_on_LG4 4 eT (Evapotranspiration) composite interval mapping RIL recombinant inbred line Ca4_15934607 NA 0 0 Ca4_15926160 0 0 60.71 4 10.1186/s12870-018-1245-1 NA NA t3827.T001276 QTL_on_LG4 4 eT (Evapotranspiration) composite interval mapping RIL recombinant inbred line Ca4_15934607 NA 0 0 Ca4_15926160 0 0 60.71 5 10.1186/s12870-018-1245-1 NA NA t3827.T001277 QTL_on_LG4 4 eT (Evapotranspiration) composite interval mapping RIL recombinant inbred line ICCM0065 NA 0 0 Ca4_12558541 0 0 67.31 4 10.1186/s12870-018-1245-1 NA NA t3827.T001278 QTL_on_LG4 4 eT (Evapotranspiration) composite interval mapping RIL recombinant inbred line NCPGR127 NA 0 0 TAA170 0 0 67.61 3 10.1186/s12870-018-1245-1 NA NA t3827.T001279 QTL_on_LG4 4 eT (Evapotranspiration) composite interval mapping RIL recombinant inbred line NCPGR127 NA 0 0 TAA170 0 0 67.61 5 10.1186/s12870-018-1245-1 NA NA t3827.T001280 QTL_on_LG4 4 eT (Evapotranspiration) composite interval mapping RIL recombinant inbred line ICCM0065 NA 0 0 Ca4_12558541 0 0 67.71 3 10.1186/s12870-018-1245-1 NA NA t3827.T001281 QTL_on_LG6 4 eT (Evapotranspiration) composite interval mapping RIL recombinant inbred line H4H06 NA 0 0 NCPGR200 0 0 52.51 3 10.1186/s12870-018-1245-1 NA NA t3827.T001282 QTL_on_LG7 4 eT (Evapotranspiration) composite interval mapping RIL recombinant inbred line CaCISP117 NA 0 0 STMS12 0 0 30.61 3 10.1186/s12870-018-1245-1 NA NA t3827.T001283 QTL_on_Chr3 4 eTR (Evapotranspiration rate) inclusive composite interval map RIL recombinant inbred line NA 3 29064360 0 3 28987359 0 50 3 10.1186/s12870-018-1245-1 NA NA t3827.T001284 QTL_on_Chr4 4 eTR (Evapotranspiration rate) inclusive composite interval map RIL recombinant inbred line NA 4 10416329 0 4 10421332 0 31 4 10.1186/s12870-018-1245-1 NA NA t3827.T001285 QTL_on_Chr4 4 eTR (Evapotranspiration rate) inclusive composite interval map RIL recombinant inbred line NA 4 11210420 0 4 11690035 0 37 6 10.1186/s12870-018-1245-1 NA NA t3827.T001286 QTL_on_Chr4 4 eTR (Evapotranspiration rate) inclusive composite interval map RIL recombinant inbred line NA 4 47733094 0 4 47796904 0 114 3 10.1186/s12870-018-1245-1 NA NA t3827.T001287 QTL_on_Chr7 4 eTR (Evapotranspiration rate) inclusive composite interval map RIL recombinant inbred line NA 7 32532047 0 7 32710042 0 16 2 10.1186/s12870-018-1245-1 NA NA t3827.T001288 QTL_on_LG3 4 eTR (Evapotranspiration rate) composite interval mapping RIL recombinant inbred line Ca3_25145247 NA 0 0 CaM1376 0 0 35.91 3 10.1186/s12870-018-1245-1 NA NA t3827.T001289 QTL_on_LG3 4 eTR (Evapotranspiration rate) composite interval mapping RIL recombinant inbred line Ca3_27010875 NA 0 0 Ca3_27890849 0 0 43.21 6 10.1186/s12870-018-1245-1 NA NA t3827.T001290 QTL_on_LG3 4 eTR (Evapotranspiration rate) composite interval mapping RIL recombinant inbred line TA64 NA 0 0 Ca3_29932504 0 0 51.41 4 10.1186/s12870-018-1245-1 NA NA t3827.T001291 QTL_on_LG4 4 eTR (Evapotranspiration rate) composite interval mapping RIL recombinant inbred line Ca4_15934607 NA 0 0 Ca4_15926160 0 0 60.71 3 10.1186/s12870-018-1245-1 NA NA t3827.T001292 QTL_on_LG4 4 eTR (Evapotranspiration rate) composite interval mapping RIL recombinant inbred line NCPGR127 NA 0 0 TAA170 0 0 70.11 4 10.1186/s12870-018-1245-1 NA NA t3827.T001293 QTL_on_LG4 4 eTR (Evapotranspiration rate) composite interval mapping RIL recombinant inbred line Ca4_11244395 NA 0 0 Ca4_11276484 0 0 70.31 7 10.1186/s12870-018-1245-1 NA NA t3827.T001294 QTL_on_LG4 4 eTR (Evapotranspiration rate) composite interval mapping RIL recombinant inbred line Ca4_11465057 NA 0 0 Ca4_11441673 0 0 70.41 8 10.1186/s12870-018-1245-1 NA NA t3827.T001295 QTL_on_LG4 4 eTR (Evapotranspiration rate) composite interval mapping RIL recombinant inbred line NCPGR21 NA 0 0 TR11 0 0 73.11 3 10.1186/s12870-018-1245-1 NA NA t3827.T001296 QTL_on_LG4 4 eTR (Evapotranspiration rate) composite interval mapping RIL recombinant inbred line NCPGR21 NA 0 0 TR11 0 0 73.11 4 10.1186/s12870-018-1245-1 NA NA t3827.T001297 QTL_on_LG4 4 eTR (Evapotranspiration rate) composite interval mapping RIL recombinant inbred line STMS11 NA 0 0 cpPb_680552 0 0 79.61 4 10.1186/s12870-018-1245-1 NA NA t3827.T001298 QTL_on_LG4 4 eTR (Evapotranspiration rate) composite interval mapping RIL recombinant inbred line STMS11 NA 0 0 cpPb_680552 0 0 79.61 4 10.1186/s12870-018-1245-1 NA NA t3827.T001299 QTL_on_LG4 4 eTR (Evapotranspiration rate) composite interval mapping RIL recombinant inbred line STMS11 NA 0 0 cpPb_680552 0 0 79.61 6 10.1186/s12870-018-1245-1 NA NA t3827.T001300 QTL_on_LG4 4 eTR (Evapotranspiration rate) composite interval mapping RIL recombinant inbred line STMS11 NA 0 0 cpPb680552 0 0 84.31 5 10.1186/s12870-018-1245-1 NA NA t3827.T001301 QTL_on_LG4 4 eTR (Evapotranspiration rate) composite interval mapping RIL recombinant inbred line STMS11 NA 0 0 cpPb680552 0 0 85.31 7 10.1186/s12870-018-1245-1 NA NA t3827.T001302 QTL_on_LG7 4 eTR (Evapotranspiration rate) composite interval mapping RIL recombinant inbred line Ca7_31192474 NA 0 0 Ca7_30060299 0 0 41.41 3 10.1186/s12870-018-1245-1 NA NA t3827.T001303 QTL_on_LG7 4 eTR (Evapotranspiration rate) composite interval mapping RIL recombinant inbred line CaM1567 NA 0 0 NCPGR141 0 0 47.31 3 10.1186/s12870-018-1245-1 NA NA t3827.T001304 QTL_on_LG7 4 eTR (Evapotranspiration rate) composite interval mapping RIL recombinant inbred line TA142 NA 0 0 TR24 0 0 63.51 5 10.1186/s12870-018-1245-1 NA NA t3827.T001305 QTL_on_LG7 4 eTR (Evapotranspiration rate) composite interval mapping RIL recombinant inbred line TA142 NA 0 0 TR24 0 0 63.51 5 10.1186/s12870-018-1245-1 NA NA t3827.T001306 4 Field- Days to 50% flowering (days); DF Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T001307 4 Field- Days to maturity (days); DM Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T001308 4 Field- Plant height (cm); PHT_F Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T001309 MTA_at_CESSR159 4 Flavonol content (FLV) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet CESSR159 NA 0 0 0 0 0.00459 33707355 NA NA t3827.T001310 MTA_at_TAA60 4 Flavonol content (FLV) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet TAA60 NA 0 0 0 0 0.00787 33707355 NA NA t3827.T001311 MTA_at_TR43 4 Flavonol content (FLV) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet TR43 NA 0 0 0 0 0.00416 33707355 NA NA t3827.T001312 4 Flower To Pod Bi-parental analysis Segregants F2 M190_Ca1_11590031 NA 0 0 0 0 105 4.16233338104774 10.1002/tpg2.20408 NA NA t3827.T001313 4 Flower To Pod Bi-parental analysis Segregants F2 M3242_Ca8_4733125 NA 0 0 0 0 199.02 4.12781537501794 10.1002/tpg2.20408 NA NA t3827.T001314 4 Flower To Pod Bi-parental analysis Segregants F2 M2805__0 NA 0 0 0 0 63.186 4.15285217967032 10.1002/tpg2.20408 NA NA t3827.T001315 4 Flower To Pod Bi-parental analysis Segregants F2 M556_Ca7_45966272 NA 0 0 0 0 56 5.56442128923891 10.1002/tpg2.20408 NA NA t3827.T001316 4 Flower To Pod Bi-parental analysis Segregants F2 M2098_Ca7_44783193 NA 0 0 0 0 0 12.1021596518322 10.1002/tpg2.20408 NA NA t3827.T001317 4 Flower To Pod Bi-parental analysis Segregants F2 M503_Ca3_29767857 NA 0 0 0 0 179 4.43421045786569 10.1002/tpg2.20408 NA NA t3827.T001318 4 Flower To Pod Bi-parental analysis Segregants F2 M811_Ca3_35390502 NA 0 0 0 0 2160 7.99299837868774 10.1002/tpg2.20408 NA NA t3827.T001319 4 Flower To Pod Bi-parental analysis Segregants F2 M693_Ca3_35449568 NA 0 0 0 0 234 9.9380026248735 10.1002/tpg2.20408 NA NA t3827.T001320 4 Flower To Pod Bi-parental analysis Segregants F2 M665_Ca3_35826682 NA 0 0 0 0 275 5.41252984074958 10.1002/tpg2.20408 NA NA t3827.T001321 4 Flower To Pod Bi-parental analysis Segregants F2 M147_Ca3_34382344 NA 0 0 0 0 349 8.86730626044641 10.1002/tpg2.20408 NA NA t3827.T001322 4 Flower To Pod Bi-parental analysis Segregants F2 M823_Ca3_35569933 NA 0 0 0 0 616.408 4.98256086769455 10.1002/tpg2.20408 NA NA t3827.T001323 4 Flower To Pod Bi-parental analysis Segregants F2 M2867_Scaffold0591_616236 NA 0 0 0 0 800.231 4.68207718267237 10.1002/tpg2.20408 NA NA t3827.T001324 4 Flower to Pod Bi-parental analysis Segregants F2 M2189_Ca7_3961040 NA 0 0 0 0 802.42 4.50178389655986 10.1002/tpg2.20408 NA NA t3827.T001325 4 Flower To Pod Bi-parental analysis Segregants F2 M668_Ca3_35527240 NA 0 0 0 0 95 10.7046054608098 10.1002/tpg2.20408 NA NA t3827.T001326 4 Flower To Pod Bi-parental analysis Segregants F2 M583_Ca3_33534820 NA 0 0 0 0 1 9.21784769692798 10.1002/tpg2.20408 NA NA t3827.T001327 4 Flower To Pod Bi-parental analysis Segregants F2 M670_Ca3_32913724 NA 0 0 0 0 200 5.68559431156908 10.1002/tpg2.20408 NA NA t3827.T001328 4 Flower To Pod Bi-parental analysis Segregants F2 M586_Ca3_35449568 NA 0 0 0 0 401 16.2387297974946 10.1002/tpg2.20408 NA NA t3827.T001329 4 Flower To Pod Bi-parental analysis Segregants F2 M641_Ca3_34921315 NA 0 0 0 0 414.432 5.02326875825221 10.1002/tpg2.20408 NA NA t3827.T001330 4 Flower To Pod Bi-parental analysis Segregants F2 M956_Ca3_62442712 NA 0 0 0 0 415 5.20618308948217 10.1002/tpg2.20408 NA NA t3827.T001331 4 Flower To Pod Bi-parental analysis Segregants F2 M646_Ca3_35469349 NA 0 0 0 0 478 4.11797000220141 10.1002/tpg2.20408 NA NA t3827.T001332 4 Flower to Pod Bi-parental analysis Segregants F2 M688_Ca3_34975027 NA 0 0 0 0 557 13.7121076080345 10.1002/tpg2.20408 NA NA t3827.T001333 4 Flower To Pod Bi-parental analysis Segregants F2 M2939__0 NA 0 0 0 0 569.413 5.41575956364968 10.1002/tpg2.20408 NA NA t3827.T001334 4 Flower to Pod Bi-parental analysis Segregants F2 M588_Ca3_35212358 NA 0 0 0 0 582.535 4.10707364323321 10.1002/tpg2.20408 NA NA t3827.T001335 4 Flower To Pod Bi-parental analysis Segregants F2 M805_Ca3_34915900 NA 0 0 0 0 611 5.30354906452805 10.1002/tpg2.20408 NA NA t3827.T001336 4 Flower To Pod Bi-parental analysis Segregants F2 M609_Ca3_32442126 NA 0 0 0 0 639 5.11862174124042 10.1002/tpg2.20408 NA NA t3827.T001337 4 Flower To Pod Bi-parental analysis Segregants F2 M2544_Ca7_54547383 NA 0 0 0 0 654.101 5.99192342054037 10.1002/tpg2.20408 NA NA t3827.T001338 4 Flower To Pod Bi-parental analysis Segregants F2 M1289_Ca4_14889104 NA 0 0 0 0 707.503 5.93623924441088 10.1002/tpg2.20408 NA NA t3827.T001339 4 Flower To Pod Bi-parental analysis Segregants F2 M2665_Ca6_64370130 NA 0 0 0 0 975 5.94822106187022 10.1002/tpg2.20408 NA NA t3827.T001340 4 Flower To Pod Bi-parental analysis Segregants F2 M2064_Ca5_47603307 NA 0 0 0 0 1362.247 4.65054615807138 10.1002/tpg2.20408 NA NA t3827.T001341 4 Flower To Pod Bi-parental analysis Segregants F2 M1238_Ca5_13965329 NA 0 0 0 0 691.058 4.71461375388754 10.1002/tpg2.20408 NA NA t3827.T001342 4 Flower To Pod Bi-parental analysis Segregants F2 M1640_Ca3_38863527 NA 0 0 0 0 186 5.78364246402755 10.1002/tpg2.20408 NA NA t3827.T001343 4 Flower To Pod Bi-parental analysis Segregants F2 M826_Ca2_35425138 NA 0 0 0 0 761 13.3981070886656 10.1002/tpg2.20408 NA NA t3827.T001344 4 Flower To Pod Bi-parental analysis Segregants F2 M3948_Ca7_22772287 NA 0 0 0 0 361.147 4.77486013833332 10.1002/tpg2.20408 NA NA t3827.T001345 4 Flower to Pod Bi-parental analysis Segregants F2 M2633_Ca7_42906105 NA 0 0 0 0 0 8.40412139688733 10.1002/tpg2.20408 NA NA t3827.T001346 4 Flower To Pod Bi-parental analysis Segregants F2 M2688_Ca8_7291839 NA 0 0 0 0 431 5.01298745491458 10.1002/tpg2.20408 NA NA t3827.T001347 4 Flower To Pod Bi-parental analysis Segregants F2 M551_Ca3_32420199 NA 0 0 0 0 0 5.1889839656424 10.1002/tpg2.20408 NA NA t3827.T001348 4 Flower To Pod Bi-parental analysis Segregants F2 M4114_Ca6_603348 NA 0 0 0 0 661 4.45841002510495 10.1002/tpg2.20408 NA NA t3827.T001349 4 Flowering time GWAS Desi and kabuli CakSNP15256 NA Ca_kabuli_ scaffold300 2213710 0 0 0 1.5 × 10-8 10.1007/s11103-015-0377-z NA NA t3827.T001350 4 Flowering time GWAS Desi and kabuli CakSNP4313 NA Ca_kabuli_chr3 29844509 0 0 0 2.0 × 10-8 10.1007/s11103-015-0377-z NA NA t3827.T001351 4 Flowering time GWAS Desi and kabuli CakSNP4801 NA Ca_kabuli_chr3 37101339 0 0 0 1.2 × 10-9 10.1007/s11103-015-0377-z NA NA t3827.T001352 4 Flowering time GWAS Desi and kabuli CakSNP5900 NA Ca_kabuli_chr4 11277574 0 0 0 1.5 × 10-8 10.1007/s11103-015-0377-z NA NA t3827.T001353 4 Flowering time GWAS Desi and kabuli CakSNP6699 NA Ca_kabuli_chr4 30308812 0 0 0 1.1 × 10-9 10.1007/s11103-015-0377-z NA NA t3827.T001354 4 Flowering time GWAS Desi and kabuli CakSNP8428 NA Ca_kabuli_chr5 30443858 0 0 0 2.0 × 10-8 10.1007/s11103-015-0377-z NA NA t3827.T001355 4 Flowering time GWAS Desi and kabuli CakSNP8449 NA Ca_kabuli_chr5 30755584 0 0 0 1.0 × 10-9 10.1007/s11103-015-0377-z NA NA t3827.T001356 4 Flowering time GWAS Desi and kabuli CakSNP10106 NA Ca_kabuli_chr6 11665233 0 0 0 2.3 × 10-8 10.1007/s11103-015-0377-z NA NA t3827.T001357 4 Flowering time Interval mapping BGD 132 × CDC Frontier F2 TA142 NA 0 0 TA64 0 0 31 4.21 10.3389/fpls.2017.01140 NA NA t3827.T001358 4 Flowering time Interval mapping BGD 132 × CDC Frontier F2 CaM1515 NA 0 0 TR13 0 0 5 5.24 10.3389/fpls.2017.01140 NA NA t3827.T001359 4 Flowering time Interval mapping BGD 132 × CDC Frontier F2 TA127 NA 0 0 H1D24 0 0 2 44.38 10.3389/fpls.2017.01140 NA NA t3827.T001360 4 Flowering time Interval mapping CDC Frontier × ICCV 96029 F8 scaffold1313p59187 NA 0 0 scaffold498p29571 0 0 17.85 - 18.53 6.24 10.1038/s41598-017-05332-x NA NA t3827.T001361 4 Flowering time Interval mapping CDC Frontier × ICCV 96029 F8 scaffold28p2999987 NA 0 0 scaffold28p1702903 0 0 23.51 - 28.59 5.98 10.1038/s41598-017-05332-x NA NA t3827.T001362 4 Flowering time Interval mapping CDC Frontier × ICCV 96029 F8 scaffold1871p14410 NA 0 0 scaffold1871p875930 0 0 35.65 - 36.85 2.98 10.1038/s41598-017-05332-x NA NA t3827.T001363 4 Flowering time Interval mapping CDC Frontier × ICCV 96029 F8 cav1sc2.1p3082421 NA 0 0 KASP-CaGI-D627E 0 0 29.93 - 30.48 7.8 10.1038/s41598-017-05332-x NA NA t3827.T001364 4 Flowering time Interval mapping CDC Frontier × ICCV 96029 F8 KASP-CaGI-D627E NA 0 0 scaffold405p948196 0 0 30.48 - 31.59 2.82 10.1038/s41598-017-05332-x NA NA t3827.T001365 4 Flowering time Interval mapping CDC Frontier × ICCV 96029 F8 cav1sc1.1p4774721 NA 0 0 cav1sc1.1p6476732 0 0 65.1 - 76 24.96 10.1038/s41598-017-05332-x NA NA t3827.T001366 4 Flowering time Interval mapping CDC Frontier × ICCV 96029 F8 cav1sc1.1p4774721 NA 0 0 cav1sc1.1p6476732 0 0 65.1 - 76 3.56 10.1038/s41598-017-05332-x NA NA t3827.T001367 4 Flowering time Interval mapping CDC Frontier × ICCV 96029 F8 scaffold267p297757 NA 0 0 scaffold937p67148 0 0 57.69 - 58.39 9.57 10.1038/s41598-017-05332-x NA NA t3827.T001368 4 Flowering time Interval mapping ICC 16374 × ICC 762 F6 CaKSNP4307 NA CaLG(Chr03) 29807248 0 CaKSNP4313 29844509 0 25.3 - 27.9 5.4-6.3 10.1007/s11103-015-0377-z NA NA t3827.T001369 4 Flowering time Interval mapping ICC 16374 × ICC 762 F6 CaKSNP4801 NA CaLG(Chr03) 37101339 0 CaKSNP4805 37108908 0 127.6 - 129.3 7.5-8.9 10.1007/s11103-015-0377-z NA NA t3827.T001370 4 Flowering time Interval mapping ICC 16374 × ICC 762 F6 CaKSNP5894 NA CaLG(Chr04) 11274281 0 CaKSNP5910 11435651 0 154.6 - 157.6 10.8-11.5 10.1007/s11103-015-0377-z NA NA t3827.T001371 4 Flowering time Interval mapping ICC 16374 × ICC 762 F6 CaKSNP6695 NA CaLG(Chr04) 30260485 0 CaKSNP6704 30599188 0 36.4 - 38.8 10.5-11.7 10.1007/s11103-015-0377-z NA NA t3827.T001372 4 Flowering time Interval mapping ICC 16374 × ICC 762 F6 CaKSNP8449 NA CaLG(Chr05) 30755584 0 CaKSNP10106 11665233 0 131.7 - 134.8 8.4-9.5 10.1007/s11103-015-0377-z NA NA t3827.T001373 4 Flowering time Interval mapping ICC 16641 × CDC Frontier F2 TA14 NA 0 0 TR44 0 0 9 55.6 10.3389/fpls.2017.01140 NA NA t3827.T001374 4 Flowering time Interval mapping ICC 5810 × CDC Frontier F2 TA122 NA 0 0 TA30 0 0 15 12.88 10.3389/fpls.2017.01140 NA NA t3827.T001375 4 Flowering time Interval mapping ICC 5810 × CDC Frontier F2 CaM1358 NA 0 0 TA142 0 0 21 16.7 10.3389/fpls.2017.01140 NA NA t3827.T001376 4 Flowering time Interval mapping ICC 5810 × CDC Frontier F2 NCPGR21 NA 0 0 GAA47 0 0 55 9.18 10.3389/fpls.2017.01140 NA NA t3827.T001377 4 Flowering time Interval mapping ICC 5810 × CDC Frontier F2 GA6 NA 0 0 TA118 0 0 15 17.79 10.3389/fpls.2017.01140 NA NA t3827.T001378 4 Flowering time Interval mapping ICCV 96029 × CDC Frontier F2 CaM1122 NA 0 0 TR13 0 0 0 3.45 10.3389/fpls.2017.01140 NA NA t3827.T001379 4 Flowering time Interval mapping ICCV 96029 × CDC Frontier F2 GAA47 NA 0 0 ICCM0192a 0 0 41 5.66 10.3389/fpls.2017.01140 NA NA t3827.T001380 flwqtl.1 4 flowering time whole genome average interval ma Rupali/Genesis836 population recombinant inbred line SNP277 NA CaLG05 0 0 SNP217 0 0 50-65 10.3389/fpls.2021.667910 NA NA t3827.T001381 flwqtl.1 4 flowering time whole genome average interval ma Rupali/Genesis836 population recombinant inbred line SNP277 NA CaLG05 0 0 SNP217 0 0 50-65 10.3389/fpls.2021.667910 NA NA t3827.T001382 flwqtl.1 4 flowering time whole genome average interval ma Rupali/Genesis836 population recombinant inbred line SNP277 NA CaLG05 0 0 SNP217 0 0 50-65 10.3389/fpls.2021.667910 NA NA t3827.T001383 flwqtl.1 4 flowering time whole genome average interval ma Rupali/Genesis836 population recombinant inbred line SNP277 NA CaLG05 0 0 SNP217 0 0 50-65 infinity 10.3389/fpls.2021.667910 NA NA t3827.T001384 flwqtl.2 4 flowering time whole genome average interval ma Rupali/Genesis836 population recombinant inbred line DArT1053(C) NA CaLG03 0 0 SNP68; SNP101 0 0 180-190 10.3389/fpls.2021.667910 NA NA t3827.T001385 flwqtl.2 4 flowering time whole genome average interval ma Rupali/Genesis836 population recombinant inbred line DArT1053(C) NA CaLG03 0 0 SNP68; SNP101 0 0 180-190 10.3389/fpls.2021.667910 NA NA t3827.T001386 flwqtl.2 4 flowering time whole genome average interval ma Rupali/Genesis836 population recombinant inbred line DArT1053(C) NA CaLG03 0 0 SNP68; SNP101 0 0 180-190 10.3389/fpls.2021.667910 NA NA t3827.T001387 flwqtl.2 4 flowering time whole genome average interval ma Rupali/Genesis836 population recombinant inbred line DArT1053(C) NA CaLG03 0 0 SNP68; SNP101 0 0 180-190 9.6 10.3389/fpls.2021.667910 NA NA t3827.T001388 flwqtl.3 4 flowering time whole genome average interval ma Rupali/Genesis836 population recombinant inbred line DArT276 NA CaLG03 0 0 DArT272(C) 0 0 100-120 10.3389/fpls.2021.667910 NA NA t3827.T001389 CaCLV1_112 4 FN (flower number) CMLM-based association mapping 92 desi and kabuli accessions accession SNP8322Ca(T/A)CaCLV1_112 NA Ca07 11109690 0 0 0 1e-09 10.1007/s00122-019-03335-y NA NA t3827.T001390 CaCLV1_112 4 FN (flower number) CMLM-based association mapping 92 desi and kabuli accessions accession SNP8323Ca(A/T)CaCLV1_112 NA Ca07 11109693 0 0 0 1.2e-09 10.1007/s00122-019-03335-y NA NA t3827.T001391 CaCLV1_112 4 FN (flower number) CMLM-based association mapping 92 desi and kabuli accessions accession 8324Ca(T/A)CaCLV1_112 NA Ca07 11109695 0 0 0 1e-09 10.1007/s00122-019-03335-y NA NA t3827.T001392 CaCLV1_112 4 FN (flower number) composite interval mapping F7 RIL mapping population recombinant inbred line in F7 generation SNP8322Ca(T/A)CaCLV1_112 NA 7 10859907 0 SNP8323Ca(A/T)CaCLV1_112; SNP832 7 11393795 0 8.1 10.1007/s00122-019-03335-y NA NA t3827.T001393 CaCLV2_11 4 FN (flower number) CMLM-based association mapping 92 desi and kabuli accessions accession SNP2583Ca(A/G)CaCLV2_11 NA Ca03 23828679 0 0 0 1e-10 10.1007/s00122-019-03335-y NA NA t3827.T001394 CaCLV2_11 4 FN (flower number) composite interval mapping F7 RIL mapping population recombinant inbred line in F7 generation SNP2583Ca(A/G)CaCLV2_11 NA 3 23745324 0 3 24095268 0 10.3 10.1007/s00122-019-03335-y NA NA t3827.T001395 CaCLV3_01 4 FN (flower number) CMLM-based association mapping 92 desi and kabuli accessions accession SNP0877Ca(T/C)CaCLV3_01 NA Ca01 14500953 0 0 0 1e-10 10.1007/s00122-019-03335-y NA NA t3827.T001396 CaCLV3_01 4 FN (flower number) composite interval mapping F7 RIL mapping population recombinant inbred line in F7 generation SNP0877Ca(T/C)CaCLV3_01 NA 1 14500953 0 1 14884940 0 9.8 10.1007/s00122-019-03335-y NA NA t3827.T001397 CaCLV3_03 4 FN (flower number) CMLM-based association mapping 92 desi and kabuli accessions accession SNP2732Ca(A/T)CaCLV3_03 NA Ca03 28437338 0 0 0 1.2e-10 10.1007/s00122-019-03335-y NA NA t3827.T001398 CaCLV3_03 4 FN (flower number) CMLM-based association mapping 92 desi and kabuli accessions accession SNP2733Ca(T/A)CaCLV3_03 NA Ca03 28437340 0 0 0 1e-10 10.1007/s00122-019-03335-y NA NA t3827.T001399 CaCLV3_03 4 FN (flower number) composite interval mapping F7 RIL mapping population recombinant inbred line in F7 generation SNP2732Ca(A/T)CaCLV3_03 NA 3 28374024 0 SNP2733Ca(T/A)CaCLV3_03 3 28716047 0 10.8 10.1007/s00122-019-03335-y NA NA t3827.T001400 4 Growth Habit Bi-parental analysis Segregants F2 M195_Ca1_14846227 NA 0 0 0 0 148 13.7086881015294 10.1002/tpg2.20408 NA NA t3827.T001401 4 Growth Habit Bi-parental analysis Segregants F2 M193_Ca1_13897749 NA 0 0 0 0 162 17.5013581177744 10.1002/tpg2.20408 NA NA t3827.T001402 4 Growth Habit Bi-parental analysis Segregants F2 M221_Ca1_14050260 NA 0 0 0 0 178 14.4235265682918 10.1002/tpg2.20408 NA NA t3827.T001403 4 Growth Habit Bi-parental analysis Segregants F2 M266_Ca1_22688928 NA 0 0 0 0 204 8.88461183032396 10.1002/tpg2.20408 NA NA t3827.T001404 4 Growth Habit Bi-parental analysis Segregants F2 M222_Ca1_15571229 NA 0 0 0 0 211 10.0866819401386 10.1002/tpg2.20408 NA NA t3827.T001405 4 Growth Habit Bi-parental analysis Segregants F2 M237_Ca1_16036004 NA 0 0 0 0 231 20.340981162338 10.1002/tpg2.20408 NA NA t3827.T001406 4 Growth Habit Bi-parental analysis Segregants F2 M347_Ca1_14907071 NA 0 0 0 0 296 15.9577999594988 10.1002/tpg2.20408 NA NA t3827.T001407 4 Growth Habit Bi-parental analysis Segregants F2 M3153_Ca7_54662743 NA 0 0 0 0 297.296 5.1135922695597 10.1002/tpg2.20408 NA NA t3827.T001408 4 Growth Habit Bi-parental analysis Segregants F2 M216_Ca1_15571229 NA 0 0 0 0 346 20.5934894455993 10.1002/tpg2.20408 NA NA t3827.T001409 4 Growth Habit Bi-parental analysis Segregants F2 M245_Ca1_16421066 NA 0 0 0 0 359.386 12.5643649613485 10.1002/tpg2.20408 NA NA t3827.T001410 4 Growth Habit Bi-parental analysis Segregants F2 M271_Ca1_40630167 NA 0 0 0 0 388.878 5.5612833727152 10.1002/tpg2.20408 NA NA t3827.T001411 4 Growth Habit Bi-parental analysis Segregants F2 M221_Ca1_12530796 NA 0 0 0 0 400 16.6411115066452 10.1002/tpg2.20408 NA NA t3827.T001412 4 Growth Habit Bi-parental analysis Segregants F2 M215_Ca1_48385506 NA 0 0 0 0 424.885 15.0326413847793 10.1002/tpg2.20408 NA NA t3827.T001413 4 Growth Habit Bi-parental analysis Segregants F2 M52_Ca1_14525232 NA 0 0 0 0 454 17.6719357653843 10.1002/tpg2.20408 NA NA t3827.T001414 4 Growth Habit Bi-parental analysis Segregants F2 M222_Ca1_15038531 NA 0 0 0 0 482.952 31.39576422 10.1002/tpg2.20408 NA NA t3827.T001415 4 Growth Habit Bi-parental analysis Segregants F2 M246_Ca1_15571163 NA 0 0 0 0 521 17.4180335005877 10.1002/tpg2.20408 NA NA t3827.T001416 4 Growth Habit Bi-parental analysis Segregants F2 M199_Ca1_16017748 NA 0 0 0 0 576.044 7.31109564061211 10.1002/tpg2.20408 NA NA t3827.T001417 4 Growth Habit Bi-parental analysis Segregants F2 M239_Ca1_15571229 NA 0 0 0 0 591.928 7.56942611365647 10.1002/tpg2.20408 NA NA t3827.T001418 4 Growth Habit Bi-parental analysis Segregants F2 M227_Ca1_15571229 NA 0 0 0 0 702 12.894889109908 10.1002/tpg2.20408 NA NA t3827.T001419 4 Growth Habit Bi-parental analysis Segregants F2 M238_Ca1_16018283 NA 0 0 0 0 716.726 12.5945066215955 10.1002/tpg2.20408 NA NA t3827.T001420 4 Growth Habit Bi-parental analysis Segregants F2 M214_Ca1_15354972 NA 0 0 0 0 742 16.4397295834732 10.1002/tpg2.20408 NA NA t3827.T001421 4 Growth Habit Bi-parental analysis Segregants F2 M235_Ca1_15038592 NA 0 0 0 0 753 21.9017350276625 10.1002/tpg2.20408 NA NA t3827.T001422 4 Growth Habit Bi-parental analysis Segregants F2 M222_Ca1_16421066 NA 0 0 0 0 755.962 12.0504745919614 10.1002/tpg2.20408 NA NA t3827.T001423 4 Growth Habit Bi-parental analysis Segregants F2 M232_Ca1_15038592 NA 0 0 0 0 820.071 4.36011922133652 10.1002/tpg2.20408 NA NA t3827.T001424 4 Growth Habit Bi-parental analysis Segregants F2 M224_Ca1_16153559 NA 0 0 0 0 859 9.80903206637942 10.1002/tpg2.20408 NA NA t3827.T001425 4 Growth Habit Bi-parental analysis Segregants F2 M230_Ca1_16160500 NA 0 0 0 0 9 8.52731340643878 10.1002/tpg2.20408 NA NA t3827.T001426 4 Growth Habit Bi-parental analysis Segregants F2 M669_Ca1_41123115 NA 0 0 0 0 285.861 12.8837485008339 10.1002/tpg2.20408 NA NA t3827.T001427 4 Growth Habit Bi-parental analysis Segregants F2 M489_Ca2_31280899 NA 0 0 0 0 588.11 5.75751367729441 10.1002/tpg2.20408 NA NA t3827.T001428 4 Growth Habit Bi-parental analysis Segregants F2 M3191_Ca8_4351989 NA 0 0 0 0 25 5.88035921036177 10.1002/tpg2.20408 NA NA t3827.T001429 4 Growth Habit Bi-parental analysis Segregants F2 M2098_Ca7_44783193 NA 0 0 0 0 0 5.6567198919633 10.1002/tpg2.20408 NA NA t3827.T001430 4 Growth Habit Bi-parental analysis Segregants F2 M602_Ca8_3103373 NA 0 0 0 0 272 4.23370426379326 10.1002/tpg2.20408 NA NA t3827.T001431 4 Growth Habit Bi-parental analysis Segregants F2 M615_Ca3_38183517 NA 0 0 0 0 172 7.25684670764157 10.1002/tpg2.20408 NA NA t3827.T001432 4 Growth Habit Bi-parental analysis Segregants F2 M1047_Ca3_62870750 NA 0 0 0 0 1761 10.3134692722769 10.1002/tpg2.20408 NA NA t3827.T001433 4 Growth Habit Bi-parental analysis Segregants F2 M2891_Scaffold2480_395580 NA 0 0 0 0 204.863 28.2317542810008 10.1002/tpg2.20408 NA NA t3827.T001434 4 Growth Habit Bi-parental analysis Segregants F2 M665_Ca3_35826682 NA 0 0 0 0 275 13.8030524982449 10.1002/tpg2.20408 NA NA t3827.T001435 4 Growth Habit Bi-parental analysis Segregants F2 M147_Ca3_34382344 NA 0 0 0 0 348 9.8877905005343 10.1002/tpg2.20408 NA NA t3827.T001436 4 Growth Habit Bi-parental analysis Segregants F2 M1653_Ca8_19858854 NA 0 0 0 0 442.429 4.18157604473102 10.1002/tpg2.20408 NA NA t3827.T001437 4 Growth Habit Bi-parental analysis Segregants F2 M2516_Ca7_53294465 NA 0 0 0 0 445 9.23478607226535 10.1002/tpg2.20408 NA NA t3827.T001438 4 Growth Habit Bi-parental analysis Segregants F2 M677_Ca3_37054400 NA 0 0 0 0 499 5.39174020963013 10.1002/tpg2.20408 NA NA t3827.T001439 4 Growth Habit Bi-parental analysis Segregants F2 M824_Ca3_35569999 NA 0 0 0 0 621 21.3671878392935 10.1002/tpg2.20408 NA NA t3827.T001440 4 Growth Habit Bi-parental analysis Segregants F2 M654_Ca3_33193432 NA 0 0 0 0 631 17.9234482984674 10.1002/tpg2.20408 NA NA t3827.T001441 4 Growth Habit Bi-parental analysis Segregants F2 M3000__0 NA 0 0 0 0 93 16.4237784122082 10.1002/tpg2.20408 NA NA t3827.T001442 4 Growth Habit Bi-parental analysis Segregants F2 M639_Ca3_32420199 NA 0 0 0 0 0 8.92563716744198 10.1002/tpg2.20408 NA NA t3827.T001443 4 Growth Habit Bi-parental analysis Segregants F2 M526_Ca3_3629027 NA 0 0 0 0 16 8.380949742 10.1002/tpg2.20408 NA NA t3827.T001444 4 Growth Habit Bi-parental analysis Segregants F2 M583_Ca3_33534820 NA 0 0 0 0 2 14.2799446794472 10.1002/tpg2.20408 NA NA t3827.T001445 4 Growth Habit Bi-parental analysis Segregants F2 M682_Ca3_33821848 NA 0 0 0 0 286.993 18.2508497189438 10.1002/tpg2.20408 NA NA t3827.T001446 4 Growth Habit Bi-parental analysis Segregants F2 M586_Ca3_35449568 NA 0 0 0 0 392 17.9375870840834 10.1002/tpg2.20408 NA NA t3827.T001447 4 Growth Habit Bi-parental analysis Segregants F2 M2731__0 NA 0 0 0 0 400.397 5.0802549092828 10.1002/tpg2.20408 NA NA t3827.T001448 4 Growth Habit Bi-parental analysis Segregants F2 M641_Ca3_34921315 NA 0 0 0 0 413 14.8029457422241 10.1002/tpg2.20408 NA NA t3827.T001449 4 Growth Habit Bi-parental analysis Segregants F2 M688_Ca3_36337208 NA 0 0 0 0 452 13.1642634758864 10.1002/tpg2.20408 NA NA t3827.T001450 4 Growth Habit Bi-parental analysis Segregants F2 M648_Ca3_34929230 NA 0 0 0 0 497 18.0048548673902 10.1002/tpg2.20408 NA NA t3827.T001451 4 Growth Habit Bi-parental analysis Segregants F2 M688_Ca3_34975027 NA 0 0 0 0 557 38.6103507106554 10.1002/tpg2.20408 NA NA t3827.T001452 4 Growth Habit Bi-parental analysis Segregants F2 M819_Ca3_35527240 NA 0 0 0 0 568 22.8742247828363 10.1002/tpg2.20408 NA NA t3827.T001453 4 Growth Habit Bi-parental analysis Segregants F2 M580_Ca3_4764646 NA 0 0 0 0 573.556 4.34807296364786 10.1002/tpg2.20408 NA NA t3827.T001454 4 Growth Habit Bi-parental analysis Segregants F2 M615_Ca3_32975564 NA 0 0 0 0 656 20.81323933002 10.1002/tpg2.20408 NA NA t3827.T001455 4 Growth Habit Bi-parental analysis Segregants F2 M656_Ca3_35036238 NA 0 0 0 0 698.014 17.8259806849144 10.1002/tpg2.20408 NA NA t3827.T001456 4 Growth Habit Bi-parental analysis Segregants F2 M141_Ca3_32276013 NA 0 0 0 0 0 5.15348222643673 10.1002/tpg2.20408 NA NA t3827.T001457 4 Growth Habit Bi-parental analysis Segregants F2 M728_Ca3_41655642 NA 0 0 0 0 0 8.24574413363142 10.1002/tpg2.20408 NA NA t3827.T001458 4 Growth Habit Bi-parental analysis Segregants F2 M683_Ca3_40431425 NA 0 0 0 0 324.843 4.89352684635992 10.1002/tpg2.20408 NA NA t3827.T001459 4 Growth Habit Bi-parental analysis Segregants F2 M2745__0 NA 0 0 0 0 398.882 8.63384484518233 10.1002/tpg2.20408 NA NA t3827.T001460 4 Growth Habit Bi-parental analysis Segregants F2 M2621_Ca6_64684310 NA 0 0 0 0 0 4.71283315430283 10.1002/tpg2.20408 NA NA t3827.T001461 4 Growth Habit Bi-parental analysis Segregants F2 M1889_Ca6_29132187 NA 0 0 0 0 135 5.77430072558274 10.1002/tpg2.20408 NA NA t3827.T001462 4 Growth Habit Bi-parental analysis Segregants F2 M635_Ca3_34185310 NA 0 0 0 0 223 12.5004770616159 10.1002/tpg2.20408 NA NA t3827.T001463 4 Growth Habit Bi-parental analysis Segregants F2 M195_Ca3_62461780 NA 0 0 0 0 55 4.84279916252317 10.1002/tpg2.20408 NA NA t3827.T001464 4 Growth Habit Bi-parental analysis Segregants F2 M1590_Ca3_37809000 NA 0 0 0 0 221 4.27992433912448 10.1002/tpg2.20408 NA NA t3827.T001465 4 Growth Habit Bi-parental analysis Segregants F2 M1026_Ca3_34974969 NA 0 0 0 0 762 20.9583758988776 10.1002/tpg2.20408 NA NA t3827.T001466 4 Growth Habit Bi-parental analysis Segregants F2 M2620_Ca6_64684310 NA 0 0 0 0 0 4.48169617040972 10.1002/tpg2.20408 NA NA t3827.T001467 4 Growth Habit Bi-parental analysis Segregants F2 M2972_Ca7_42906105 NA 0 0 0 0 0 5.62686063898761 10.1002/tpg2.20408 NA NA t3827.T001468 4 Growth Habit Bi-parental analysis Segregants F2 M1562_Ca5_25710658 NA 0 0 0 0 454 4.76792904391131 10.1002/tpg2.20408 NA NA t3827.T001469 4 Growth Habit Bi-parental analysis Segregants F2 M2633_Ca7_42906105 NA 0 0 0 0 1 9.65990699603475 10.1002/tpg2.20408 NA NA t3827.T001470 4 Growth Habit Bi-parental analysis Segregants F2 M551_Ca3_32420199 NA 0 0 0 0 0 10.6894296619932 10.1002/tpg2.20408 NA NA t3827.T001471 4 Growth habit GWAS FarmCPU Segregants F2 NA 10223499 0 0 0 0 8.46226590654314 10.1002/tpg2.20408 NA NA t3827.T001472 4 Growth habit GWAS FarmCPU Segregants F2 NA 10302631 0 0 0 0 4.75698888734154 10.1002/tpg2.20408 NA NA t3827.T001473 4 Growth habit GWAS FarmCPU Segregants F2 NA 12485554 0 0 0 0 1.00903044357627 10.1002/tpg2.20408 NA NA t3827.T001474 4 Growth habit GWAS FarmCPU Segregants F2 NA 13453049 0 0 0 0 3.15617454522008 10.1002/tpg2.20408 NA NA t3827.T001475 4 Growth habit GWAS FarmCPU Segregants F2 NA 14272818 0 0 0 0 2.36004707879146 10.1002/tpg2.20408 NA NA t3827.T001476 4 Growth habit GWAS FarmCPU Segregants F2 NA 14283474 0 0 0 0 1.04315280729395 10.1002/tpg2.20408 NA NA t3827.T001477 4 Growth habit GWAS FarmCPU Segregants F2 NA 14513388 0 0 0 0 7.17393501653096 10.1002/tpg2.20408 NA NA t3827.T001478 4 Growth habit GWAS FarmCPU Segregants F2 NA 14907071 0 0 0 0 1.56543892733692 10.1002/tpg2.20408 NA NA t3827.T001479 4 Growth habit GWAS FarmCPU Segregants F2 NA 15538214 0 0 0 0 1.20880652043315 10.1002/tpg2.20408 NA NA t3827.T001480 4 Growth habit GWAS FarmCPU Segregants F2 NA 15606688 0 0 0 0 3.3335291356132e 10.1002/tpg2.20408 NA NA t3827.T001481 4 Growth habit GWAS FarmCPU Segregants F2 NA 15606688 0 0 0 0 3.40465310833088 10.1002/tpg2.20408 NA NA t3827.T001482 4 Growth habit GWAS FarmCPU Segregants F2 NA 17406083 0 0 0 0 1.25237511048525 10.1002/tpg2.20408 NA NA t3827.T001483 4 Growth habit GWAS FarmCPU Segregants F2 NA 1807207 0 0 0 0 7.85252128447558 10.1002/tpg2.20408 NA NA t3827.T001484 4 Growth habit GWAS FarmCPU Segregants F2 NA 18295743 0 0 0 0 2.31788715806922 10.1002/tpg2.20408 NA NA t3827.T001485 4 Growth habit GWAS FarmCPU Segregants F2 NA 19871589 0 0 0 0 2.37760382409017 10.1002/tpg2.20408 NA NA t3827.T001486 4 Growth habit GWAS FarmCPU Segregants F2 NA 2062794 0 0 0 0 2.20781995535405 10.1002/tpg2.20408 NA NA t3827.T001487 4 Growth habit GWAS FarmCPU Segregants F2 NA 27177590 0 0 0 0 1.00895731245087 10.1002/tpg2.20408 NA NA t3827.T001488 4 Growth habit GWAS FarmCPU Segregants F2 NA 28254901 0 0 0 0 1.70950720154603 10.1002/tpg2.20408 NA NA t3827.T001489 4 Growth habit GWAS FarmCPU Segregants F2 NA 29546827 0 0 0 0 1.04719498304455 10.1002/tpg2.20408 NA NA t3827.T001490 4 Growth habit GWAS FarmCPU Segregants F2 NA 29865373 0 0 0 0 3.43355923316053 10.1002/tpg2.20408 NA NA t3827.T001491 4 Growth habit GWAS FarmCPU Segregants F2 NA 31680040 0 0 0 0 8.66962597805872 10.1002/tpg2.20408 NA NA t3827.T001492 4 Growth habit GWAS FarmCPU Segregants F2 NA 32121072 0 0 0 0 1.62426034477052 10.1002/tpg2.20408 NA NA t3827.T001493 4 Growth habit GWAS FarmCPU Segregants F2 NA 3425762 0 0 0 0 2.90561271054088 10.1002/tpg2.20408 NA NA t3827.T001494 4 Growth habit GWAS FarmCPU Segregants F2 NA 34382344 0 0 0 0 5.09073566456015 10.1002/tpg2.20408 NA NA t3827.T001495 4 Growth habit GWAS FarmCPU Segregants F2 NA 3488393 0 0 0 0 1.55493762454687 10.1002/tpg2.20408 NA NA t3827.T001496 4 Growth habit GWAS FarmCPU Segregants F2 NA 34975027 0 0 0 0 3.71593088760666 10.1002/tpg2.20408 NA NA t3827.T001497 4 Growth habit GWAS FarmCPU Segregants F2 NA 35317600 0 0 0 0 6.33326792152946 10.1002/tpg2.20408 NA NA t3827.T001498 4 Growth habit GWAS FarmCPU Segregants F2 NA 35715687 0 0 0 0 9.40475441409887 10.1002/tpg2.20408 NA NA t3827.T001499 4 Growth habit GWAS FarmCPU Segregants F2 NA 37114864 0 0 0 0 4.37949913594749 10.1002/tpg2.20408 NA NA t3827.T001500 4 Growth habit GWAS FarmCPU Segregants F2 NA 38802251 0 0 0 0 4.8029613650105e 10.1002/tpg2.20408 NA NA t3827.T001501 4 Growth habit GWAS FarmCPU Segregants F2 NA 39617700 0 0 0 0 2.19452263583557 10.1002/tpg2.20408 NA NA t3827.T001502 4 Growth habit GWAS FarmCPU Segregants F2 NA 45936912 0 0 0 0 1.31720485795467 10.1002/tpg2.20408 NA NA t3827.T001503 4 Growth habit GWAS FarmCPU Segregants F2 NA 47303147 0 0 0 0 8.53665908933353 10.1002/tpg2.20408 NA NA t3827.T001504 4 Growth habit GWAS FarmCPU Segregants F2 NA 51827346 0 0 0 0 8.33010992421927 10.1002/tpg2.20408 NA NA t3827.T001505 4 Growth habit GWAS FarmCPU Segregants F2 NA 55072361 0 0 0 0 3.13681236051123 10.1002/tpg2.20408 NA NA t3827.T001506 4 Growth habit GWAS FarmCPU Segregants F2 NA 61275121 0 0 0 0 9.46148678806869 10.1002/tpg2.20408 NA NA t3827.T001507 4 Growth habit GWAS FarmCPU Segregants F2 NA 6132526 0 0 0 0 5.0608943197119e 10.1002/tpg2.20408 NA NA t3827.T001508 4 Growth habit GWAS FarmCPU Segregants F2 NA 61385427 0 0 0 0 6.87812967732973 10.1002/tpg2.20408 NA NA t3827.T001509 4 Growth habit GWAS FarmCPU Segregants F2 NA 8665891 0 0 0 0 8.61088143933269 10.1002/tpg2.20408 NA NA t3827.T001510 4 Growth habit GWAS FarmCPU Segregants F2 NA 8885728 0 0 0 0 4.10413119197478 10.1002/tpg2.20408 NA NA t3827.T001511 4 Growth habit GWAS FarmCPU Segregants F2 NA 9345375 0 0 0 0 4.69611376137831 10.1002/tpg2.20408 NA NA t3827.T001512 4 Growth habit GWAS FarmCPU Segregants F2 NA 9483789 0 0 0 0 8.33271659961816 10.1002/tpg2.20408 NA NA t3827.T001513 4 Growth habit GWAS FarmCPU Segregants F2 NA 9677598 0 0 0 0 4.4983900640949e 10.1002/tpg2.20408 NA NA t3827.T001514 4 Growth habit GWAS FarmCPU Segregants F2 NA 9696544 0 0 0 0 8.3281252763099e 10.1002/tpg2.20408 NA NA t3827.T001515 4 Growth Vigour Bi-parental analysis Segregants F2 M203_Ca1_16153559 NA 0 0 0 0 149.799 5.1997642401666 10.1002/tpg2.20408 NA NA t3827.T001516 4 Growth Vigour Bi-parental analysis Segregants F2 M349_Ca1_15038592 NA 0 0 0 0 285 7.67014262082269 10.1002/tpg2.20408 NA NA t3827.T001517 4 Growth Vigour Bi-parental analysis Segregants F2 M69_Ca1_3415543 NA 0 0 0 0 598.346 5.17826704062555 10.1002/tpg2.20408 NA NA t3827.T001518 4 Growth Vigour Bi-parental analysis Segregants F2 M289_Ca1_37208111 NA 0 0 0 0 676 5.34200692949511 10.1002/tpg2.20408 NA NA t3827.T001519 4 Growth Vigour Bi-parental analysis Segregants F2 M229_Ca1_14050260 NA 0 0 0 0 743.162 4.12476936931109 10.1002/tpg2.20408 NA NA t3827.T001520 4 Growth Vigour Bi-parental analysis Segregants F2 M525_Ca2_33266156 NA 0 0 0 0 273.72 4.98580949427805 10.1002/tpg2.20408 NA NA t3827.T001521 4 Growth Vigour Bi-parental analysis Segregants F2 M615_Ca3_38183517 NA 0 0 0 0 167 4.90723559110287 10.1002/tpg2.20408 NA NA t3827.T001522 4 Growth Vigour Bi-parental analysis Segregants F2 M1045_Ca3_62641477 NA 0 0 0 0 1805 17.2405416374929 10.1002/tpg2.20408 NA NA t3827.T001523 4 Growth Vigour Bi-parental analysis Segregants F2 M350_Ca2_1857367 NA 0 0 0 0 282.938 5.19632520941465 10.1002/tpg2.20408 NA NA t3827.T001524 4 Growth Vigour Bi-parental analysis Segregants F2 M152_Ca3_37286139 NA 0 0 0 0 377.201 4.20064793375822 10.1002/tpg2.20408 NA NA t3827.T001525 4 Growth Vigour Bi-parental analysis Segregants F2 M777_Ca3_40126650 NA 0 0 0 0 369 6.96142205333689 10.1002/tpg2.20408 NA NA t3827.T001526 4 Growth Vigour Bi-parental analysis Segregants F2 M808_Ca3_35015931 NA 0 0 0 0 596 6.97937600168772 10.1002/tpg2.20408 NA NA t3827.T001527 4 Growth Vigour Bi-parental analysis Segregants F2 M1726_Ca5_54198322 NA 0 0 0 0 126.088 5.24879788727634 10.1002/tpg2.20408 NA NA t3827.T001528 4 Growth Vigour Bi-parental analysis Segregants F2 M1278_Ca4_37855914 NA 0 0 0 0 178.46 4.77903403378752 10.1002/tpg2.20408 NA NA t3827.T001529 4 Growth Vigour Bi-parental analysis Segregants F2 M1664_Ca5_50726507 NA 0 0 0 0 38 6.96434390619041 10.1002/tpg2.20408 NA NA t3827.T001530 4 Growth Vigour Bi-parental analysis Segregants F2 M1659_Ca5_26608643 NA 0 0 0 0 726.851 5.64478967822648 10.1002/tpg2.20408 NA NA t3827.T001531 4 Growth Vigour Bi-parental analysis Segregants F2 M2413_Ca7_23793426 NA 0 0 0 0 909.472 5.21705000230211 10.1002/tpg2.20408 NA NA t3827.T001532 4 Growth Vigour Bi-parental analysis Segregants F2 M2634_Ca8_3660861 NA 0 0 0 0 222 4.01800118667988 10.1002/tpg2.20408 NA NA t3827.T001533 Dt1 4 indeterminate stem growth habit BSA analysis F2 plants F2 H3DO5 NA 0 0 0 0 10.1038/s41598-021-01464-3 NA NA t3827.T001534 Dt1 4 indeterminate stem growth habit BSA analysis F2 plants F2 Ca_GPSSR00560 NA 0 0 0 0 10.1038/s41598-021-01464-3 NA NA t3827.T001535 Dt1 4 indeterminate stem growth habit BSA analysis F2 plants F2 TA42 NA 0 0 0 0 10.1038/s41598-021-01464-3 NA NA t3827.T001536 QTL_on_Chr1 4 LAI (Leaf area index) inclusive composite interval map RIL recombinant inbred line NA 1 9838522 0 1 9855212 0 7 3 10.1186/s12870-018-1245-1 NA NA t3827.T001537 QTL_on_Chr4 4 LAI (Leaf area index) inclusive composite interval map RIL recombinant inbred line NA 4 13393647 0 4 13547009 0 46 6 10.1186/s12870-018-1245-1 NA NA t3827.T001538 QTL_on_Chr4 4 LAI (Leaf area index) inclusive composite interval map RIL recombinant inbred line NA 4 48635948 0 4 48732122 0 123 2 10.1186/s12870-018-1245-1 NA NA t3827.T001539 QTL_on_Chr4 4 LAI (Leaf area index) inclusive composite interval map RIL recombinant inbred line NA 4 48635948 0 4 48732122 0 123 2 10.1186/s12870-018-1245-1 NA NA t3827.T001540 QTL_on_LG1 4 LAI (Leaf area index) composite interval mapping RIL recombinant inbred line Ca1_16379258 NA 0 0 TS71 0 0 43.81 3 10.1186/s12870-018-1245-1 NA NA t3827.T001541 QTL_on_LG1 4 LAI (Leaf area index) composite interval mapping RIL recombinant inbred line ICCM0082 NA 0 0 ICCM0247 0 0 72.31 4 10.1186/s12870-018-1245-1 NA NA t3827.T001542 QTL_on_LG2 4 LAI (Leaf area index) composite interval mapping RIL recombinant inbred line H1P092 NA 0 0 CaM0142 0 0 34.51 3 10.1186/s12870-018-1245-1 NA NA t3827.T001543 QTL_on_LG4 4 LAI (Leaf area index) composite interval mapping RIL recombinant inbred line cpPb_676868 NA 0 0 TA132 0 0 51.01 3 10.1186/s12870-018-1245-1 NA NA t3827.T001544 QTL_on_LG4 4 LAI (Leaf area index) composite interval mapping RIL recombinant inbred line CaM1903 NA 0 0 ICCM0249 0 0 54.51 3 10.1186/s12870-018-1245-1 NA NA t3827.T001545 QTL_on_LG4 4 LAI (Leaf area index) composite interval mapping RIL recombinant inbred line ICCM0249 NA 0 0 NCPGR127 0 0 55.51 3 10.1186/s12870-018-1245-1 NA NA t3827.T001546 QTL_on_LG4 4 LAI (Leaf area index) composite interval mapping RIL recombinant inbred line ICCM0249 NA 0 0 NCPGR127 0 0 55.51 5 10.1186/s12870-018-1245-1 NA NA t3827.T001547 QTL_on_LG4 4 LAI (Leaf area index) composite interval mapping RIL recombinant inbred line Ca4_15942388 NA 0 0 Ca4_15651804 0 0 59.31 6 10.1186/s12870-018-1245-1 NA NA t3827.T001548 QTL_on_LG4 4 LAI (Leaf area index) composite interval mapping RIL recombinant inbred line Ca4_15942388 NA 0 0 Ca4_15651804 0 0 59.41 4 10.1186/s12870-018-1245-1 NA NA t3827.T001549 QTL_on_LG4 4 LAI (Leaf area index) composite interval mapping RIL recombinant inbred line Ca4_48457876 NA 0 0 Ca4_47592455 0 0 6.21 4 10.1186/s12870-018-1245-1 NA NA t3827.T001550 QTL_on_LG4 4 LAI (Leaf area index) composite interval mapping RIL recombinant inbred line Ca4_16046928 NA 0 0 ICCM0249 0 0 63.31 3 10.1186/s12870-018-1245-1 NA NA t3827.T001551 QTL_on_LG4 4 LAI (Leaf area index) composite interval mapping RIL recombinant inbred line NCPGR127 NA 0 0 TAA170 0 0 66.61 4 10.1186/s12870-018-1245-1 NA NA t3827.T001552 QTL_on_LG4 4 LAI (Leaf area index) composite interval mapping RIL recombinant inbred line NCPGR127 NA 0 0 TAA170 0 0 66.61 4 10.1186/s12870-018-1245-1 NA NA t3827.T001553 QTL_on_LG4 4 LAI (Leaf area index) composite interval mapping RIL recombinant inbred line NCPGR127 NA 0 0 TAA170 0 0 66.61 7 10.1186/s12870-018-1245-1 NA NA t3827.T001554 QTL_on_LG4 4 LAI (Leaf area index) composite interval mapping RIL recombinant inbred line Ca4_13840251 NA 0 0 Ca4_11276225 0 0 68.81 3 10.1186/s12870-018-1245-1 NA NA t3827.T001555 QTL_on_LG4 4 LAI (Leaf area index) composite interval mapping RIL recombinant inbred line Ca4_13840251 NA 0 0 Ca4_11276225 0 0 68.81 4 10.1186/s12870-018-1245-1 NA NA t3827.T001556 QTL_on_LG4 4 LAI (Leaf area index) composite interval mapping RIL recombinant inbred line Ca4_13840251 NA 0 0 Ca4_11276225 0 0 68.81 6 10.1186/s12870-018-1245-1 NA NA t3827.T001557 QTL_on_LG4 4 LAI (Leaf area index) composite interval mapping RIL recombinant inbred line Ca4_13840227 NA 0 0 Ca4_13838796 0 0 73.01 5 10.1186/s12870-018-1245-1 NA NA t3827.T001558 QTL_on_LG4 4 LAI (Leaf area index) composite interval mapping RIL recombinant inbred line Ca4_48457876 NA 0 0 Ca4_47592455 0 0 8.21 3 10.1186/s12870-018-1245-1 NA NA t3827.T001559 QTL_on_LG8 4 LAI (Leaf area index) composite interval mapping RIL recombinant inbred line Ca8_8270503 NA 0 0 CaM1918 0 0 36.31 4 10.1186/s12870-018-1245-1 NA NA t3827.T001560 QTL_on_LG8 4 LAI (Leaf area index) composite interval mapping RIL recombinant inbred line NCPGR164 NA 0 0 Ca8_4106644 0 0 58.91 3 10.1186/s12870-018-1245-1 NA NA t3827.T001561 4 LeasyScan- Plant height (mm); PHT_L Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T001562 4 LeasyScan- Plant vigour; VIG Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T001563 4 Maturing time Interval mapping ICC 4958 × ICC 17160 F5 CID_C_403402 NA 0 0 CID_C_492721 0 0 5.997 - 7.033 10.1093/dnares/dsv020 NA NA t3827.T001564 4 Maturing time Interval mapping ICC 4958 × ICC 17160 F5 CID_C_4546528 NA 0 0 CID_C_4703718 0 0 46.061 - 47.616 10.1093/dnares/dsv020 NA NA t3827.T001565 4 Maturing time Interval mapping ICC 4958 × ICC 17160 F5 CID_C_4424175 NA 0 0 CID_C_4575860 0 0 38.314 - 39.606 10.1093/dnares/dsv020 NA NA t3827.T001566 qmpi-01 4 Membrane permeability index composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021160.1.18699653 NA 1 0 0 CNC_021160.1.30785636 0 0 3.29 10.1371/journal.pone.0254957 NA NA t3827.T001567 qmpi-01 4 Membrane permeability index composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021161.1.3663690 NA 2 0 0 CNC_021161.1.31430073 0 0 2.52 10.1371/journal.pone.0254957 NA NA t3827.T001568 qmpi-02 4 Membrane permeability index composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021161.1.3663690 NA 2 0 0 CNC_021161.1.31430073 0 0 2.52 10.1371/journal.pone.0254957 NA NA t3827.T001569 qmpi-02 4 Membrane permeability index composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021163.1.38540774 NA 4 0 0 CNC_021163.1.38370939 0 0 3.21 10.1371/journal.pone.0254957 NA NA t3827.T001570 qmpi-03 4 Membrane permeability index composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021163.1.41223431 NA 4 0 0 CNC_021163.1.44127944 0 0 3.55 10.1371/journal.pone.0254957 NA NA t3827.T001571 qNBC8.1 4 NB (number of branches per plant) composite interval mapping RIL recombinant inbred line in F8 generation AX-123638389 NA 0 0 AX-123638445 0 0 44.91 5.5 10.3390/ijms21145058 NA NA t3827.T001572 qNBC8.2 4 NB (number of branches per plant) composite interval mapping RIL recombinant inbred line in F8 generation AX-123657789 NA 0 0 AX-123638459 0 0 10.22 4 10.3390/ijms21145058 NA NA t3827.T001573 qNBC8.3 4 NB (number of branches per plant) composite interval mapping RIL recombinant inbred line in F8 generation AX-123638389 NA 0 0 AX-123638445 0 0 44.91 3.5 10.3390/ijms21145058 NA NA t3827.T001574 salNecrosisqtl.1 4 Necrosis whole genome average interval ma Rupali/Genesis836 population recombinant inbred line DArT595 NA CaLG05 0 0 DArT553 0 0 97.52 - 111.41 3.2408 10.3389/fpls.2021.667910 NA NA t3827.T001575 salNecrosisqtl.2 4 Necrosis whole genome average interval ma Rupali/Genesis836 population recombinant inbred line SNP148(C) NA CaLG04 0 0 SNP201 0 0 18.22 - 27.87 12.6845 10.3389/fpls.2021.667910 NA NA t3827.T001576 salNecrosisqtl.3 4 Necrosis whole genome average interval ma Rupali/Genesis836 population recombinant inbred line SNP14_C14_12_74(C) NA CaLG04 0 0 SNP15_C14_13_06 0 0 71.61 - 72.17 5.4586 10.3389/fpls.2021.667910 NA NA t3827.T001577 salNecrosisqtl.4 4 Necrosis whole genome average interval ma Rupali/Genesis836 population recombinant inbred line DArT273(C) NA CaLG03 0 0 DArT255(C) 0 0 68.63 - 88.75 12.8835 10.3389/fpls.2021.667910 NA NA t3827.T001578 CaNBI_LS6.1 4 Nitrogen balance index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA6_10671035 NA 0 0 SCA6_10020177 0 0 69.71 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001579 CaNBI_LS6.2 4 Nitrogen balance index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA6_10671035 NA 0 0 SCA6_10020177 0 0 70.71 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001580 CaNBI_LS7.1 4 Nitrogen balance index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA7_44149643 NA 0 0 SCA7_28235343 0 0 34.61 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001581 CaNBI_LS7.1 4 Nitrogen balance index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA7_44149643 NA 0 0 SCA7_28235343 0 0 34.61 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001582 CaNBI_LS7.2 4 Nitrogen balance index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA7_47907019 NA 0 0 SCA7_9555338 0 0 97.01 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001583 CaNBI_LS8.1 4 Nitrogen balance index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA8_6301805 NA 0 0 SCA8_15284963 0 0 0.01 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001584 CaNBI_LS8.1 4 Nitrogen balance index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA8_6301805 NA 0 0 SCA8_15284963 0 0 0.01 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001585 CaNBI_LS8.2 4 Nitrogen balance index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA8_6301805 NA 0 0 SCA8_15284963 0 0 1.01 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001586 CaNBI_LS8.2 4 Nitrogen balance index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA8_6301805 NA 0 0 SCA8_15284963 0 0 1.01 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001587 CaNBI_LS8.3 4 Nitrogen balance index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA8_11012719 NA 0 0 SCA8_6301805 0 0 3.81 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001588 MTA_at_CESSR139 4 Nitrogen balance index (NBI) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet CESSR139 NA 0 0 0 0 0.00484 33707355 NA NA t3827.T001589 MTA_at_NCPGR12 4 Nitrogen balance index (NBI) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR12 NA 0 0 0 0 0.00344 33707355 NA NA t3827.T001590 MTA_at_NCPGR155 4 Nitrogen balance index (NBI) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR155 NA 0 0 0 0 0.0017 33707355 NA NA t3827.T001591 MTA_at_NCPGR165 4 Nitrogen balance index (NBI) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR165 NA 0 0 0 0 0.00695 33707355 NA NA t3827.T001592 MTA_at_TA180 4 Nitrogen balance index (NBI) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet TA180 NA 0 0 0 0 0.00111 33707355 NA NA t3827.T001593 4 Node number of first flowering Interval mapping ICCV 96029 × CDC Frontier RIL scaffold1777p70396 NA 0 0 0 0 5.8 5.8 10.1139/gen-2016-0036 NA NA t3827.T001594 4 Node number of first flowering Interval mapping ICCV 96029 × CDC Frontier RIL scaffold360p644415 NA 0 0 0 0 22.64 4.2 10.1139/gen-2016-0036 NA NA t3827.T001595 4 Node number of first flowering Interval mapping ICCV 96029 × CDC Frontier RIL CAV1SC2.1P3082421 NA 0 0 0 0 57.9 9.4 10.1139/gen-2016-0036 NA NA t3827.T001596 4 Node number of first flowering Interval mapping ICCV 96029 × CDC Frontier RIL scaffold1439p220499 NA 0 0 0 0 45.8 9.3 10.1139/gen-2016-0036 NA NA t3827.T001597 CaNDVI_LS1.1 4 Normalized difference vegetation index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA1_33504088 NA 0 0 SCA1_40495126 0 0 42.21 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001598 CaNDVI_LS1.2 4 Normalized difference vegetation index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA1_8682204 NA 0 0 SCA1_33504088 0 0 44.21 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001599 CaNDVI_LS2.1 4 Normalized difference vegetation index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA2_31975221 NA 0 0 SCA2_8484804 0 0 65.41 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001600 CaNDVI_LS2.1 4 Normalized difference vegetation index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA2_31975221 NA 0 0 SCA2_8484804 0 0 65.41 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001601 CaNDVI_LS2.2 4 Normalized difference vegetation index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA2_16462107 NA 0 0 SCA2_31975187 0 0 66.01 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001602 CaNDVI_LS2.2 4 Normalized difference vegetation index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA2_16462107 NA 0 0 SCA2_31975187 0 0 66.01 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001603 CaNDVI_NS3.1 4 Normalized difference vegetation index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA3_4871529 NA 0 0 SCA3_18799532 0 0 48.41 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001604 CaNDVI_NS4.1 4 Normalized difference vegetation index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA4_16039554 NA 0 0 SCA4_15942274 0 0 68.31 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001605 CaNDVI_NS4.1 4 Normalized difference vegetation index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA4_16039554 NA 0 0 SCA4_15942274 0 0 68.31 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001606 CaNDVI_NS4.2 4 Normalized difference vegetation index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA4_47389419 NA 0 0 SCA4_15935131 0 0 69.21 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001607 CaNDVI_NS5.1 4 Normalized difference vegetation index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA5_12124749 NA 0 0 SCA5_22672234 0 0 35.11 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001608 CaNDVI_NS5.2 4 Normalized difference vegetation index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA5_12124749 NA 0 0 SCA5_22672234 0 0 36.11 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001609 CaNDVI_NS6.1 4 Normalized difference vegetation index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA6_57720446 NA 0 0 SCA6_57760410 0 0 20.01 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001610 CaNDVI_NS8.1 4 Normalized difference vegetation index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA8_11729896 NA 0 0 SCA8_12875512 0 0 18.61 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001611 CaNDVI_NS8.2 4 Normalized difference vegetation index composite interval mapping (CIM) 184 F7 RIL lines recombinant inbred line in F7 generation SCA8_11269673 NA 0 0 SCA8_11729896 0 0 18.91 ≤ 0.05 10.3389/fpls.2021.655103 NA NA t3827.T001612 MTA_at_ICCM0297 4 Normalized difference vegetation index (NDVI) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet ICCM0297 NA 0 0 0 0 0.00448 33707355 NA NA t3827.T001613 MTA_at_NCPGR156 4 Normalized difference vegetation index (NDVI) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR156 NA 0 0 0 0 0.000547 33707355 NA NA t3827.T001614 MTA_at_NCPGR156 4 Normalized difference vegetation index (NDVI) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet NCPGR156 NA 0 0 0 0 0.00678 33707355 NA NA t3827.T001615 MTA_at_TA113 4 Normalized difference vegetation index (NDVI) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet TA113 NA 0 0 0 0 1.7e-05 33707355 NA NA t3827.T001616 MTA_at_TA64 4 Normalized difference vegetation index (NDVI) Mixed linear model (MLM) 182 chickpea genotypes germplasm accessions, advanced breeding line and released variet TA64 NA 0 0 0 0 0.00987 33707355 NA NA t3827.T001617 qPB2.1 4 Number of primary branches (PB) composite interval mapping ICC 4958 X DCP 92-3 RIL population recombinant inbred line AX-123621195 NA 0 0 AX-123621154 0 0 111.1 - 111.4 3.4 10.1371/journal.pone.0251669 NA NA t3827.T001618 qPB3.1 4 Number of primary branches (PB) composite interval mapping ICC 4958 X DCP 92-3 RIL population recombinant inbred line AX-123622729 NA 0 0 AX-123622639 0 0 14.3 - 14.4 6.5 10.1371/journal.pone.0251669 NA NA t3827.T001619 qPHC5.1 4 PH (plant height) composite interval mapping RIL recombinant inbred line in F8 generation AX-123662454 NA 0 0 AX-123631761 0 0 16.55 6.1 10.3390/ijms21145058 NA NA t3827.T001620 qPHC5.2 4 PH (plant height) composite interval mapping RIL recombinant inbred line in F8 generation AX-123653281 NA 0 0 AX-123631517 0 0 60.33 4.1 10.3390/ijms21145058 NA NA t3827.T001621 qPHC6.1 4 PH (plant height) composite interval mapping RIL recombinant inbred line in F8 generation AX-123654072 NA 0 0 AX-123633446 0 0 44.23 3.4 10.3390/ijms21145058 NA NA t3827.T001622 qPHC7.1 4 PH (plant height) composite interval mapping RIL recombinant inbred line in F8 generation AX-123635844 NA 0 0 AX-123655878 0 0 230.14 3.8 10.3390/ijms21145058 NA NA t3827.T001623 QTL_on_Chr1 4 PH (Plant height) inclusive composite interval map RIL recombinant inbred line NA 1 46320971 0 1 46550755 0 179 4 10.1186/s12870-018-1245-1 NA NA t3827.T001624 QTL_on_Chr1 4 PH (Plant height) inclusive composite interval map RIL recombinant inbred line NA 1 4992190 0 1 4870121 0 93 3 10.1186/s12870-018-1245-1 NA NA t3827.T001625 QTL_on_Chr2 4 PH (Plant height) inclusive composite interval map RIL recombinant inbred line NA 2 30506636 0 2 30527477 0 77 3 10.1186/s12870-018-1245-1 NA NA t3827.T001626 QTL_on_Chr2 4 PH (Plant height) inclusive composite interval map RIL recombinant inbred line NA 2 30506636 0 2 30527477 0 77 3 10.1186/s12870-018-1245-1 NA NA t3827.T001627 QTL_on_Chr2 4 PH (Plant height) inclusive composite interval map RIL recombinant inbred line NA 2 6254554 0 2 9665288 0 1 4 10.1186/s12870-018-1245-1 NA NA t3827.T001628 QTL_on_Chr2 4 PH (Plant height) inclusive composite interval map RIL recombinant inbred line NA 2 6254554 0 2 9665288 0 1 5 10.1186/s12870-018-1245-1 NA NA t3827.T001629 QTL_on_Chr2 4 PH (Plant height) inclusive composite interval map RIL recombinant inbred line NA 2 6254554 0 2 9665288 0 2 5 10.1186/s12870-018-1245-1 NA NA t3827.T001630 QTL_on_Chr3 4 PH (Plant height) inclusive composite interval map RIL recombinant inbred line NA 3 18480135 0 3 18295791 0 69 4 10.1186/s12870-018-1245-1 NA NA t3827.T001631 QTL_on_Chr3 4 PH (Plant height) inclusive composite interval map RIL recombinant inbred line NA 3 18480135 0 3 18295791 0 69 5 10.1186/s12870-018-1245-1 NA NA t3827.T001632 QTL_on_Chr3 4 PH (Plant height) inclusive composite interval map RIL recombinant inbred line NA 3 33718067 0 3 33467733 0 79 4 10.1186/s12870-018-1245-1 NA NA t3827.T001633 QTL_on_Chr4 4 PH (Plant height) inclusive composite interval map RIL recombinant inbred line NA 4 13239546 0 4 13378761 0 45 20 10.1186/s12870-018-1245-1 NA NA t3827.T001634 QTL_on_Chr4 4 PH (Plant height) inclusive composite interval map RIL recombinant inbred line NA 4 13239546 0 4 13378761 0 45 21 10.1186/s12870-018-1245-1 NA NA t3827.T001635 QTL_on_Chr4 4 PH (Plant height) inclusive composite interval map RIL recombinant inbred line NA 4 13239546 0 4 13378761 0 45 22 10.1186/s12870-018-1245-1 NA NA t3827.T001636 QTL_on_Chr4 4 PH (Plant height) inclusive composite interval map RIL recombinant inbred line NA 4 18035954 0 4 18295099 0 64 3 10.1186/s12870-018-1245-1 NA NA t3827.T001637 QTL_on_Chr5 4 PH (Plant height) inclusive composite interval map RIL recombinant inbred line NA 5 31281006 0 5 31262177 0 114 2 10.1186/s12870-018-1245-1 NA NA t3827.T001638 QTL_on_Chr7 4 PH (Plant height) inclusive composite interval map RIL recombinant inbred line NA 7 12083724 0 7 11984393 0 45 6 10.1186/s12870-018-1245-1 NA NA t3827.T001639 QTL_on_Chr7 4 PH (Plant height) inclusive composite interval map RIL recombinant inbred line NA 7 12083724 0 7 11984393 0 45 6 10.1186/s12870-018-1245-1 NA NA t3827.T001640 QTL_on_Chr7 4 PH (Plant height) inclusive composite interval map RIL recombinant inbred line NA 7 1934083 0 7 1901490 0 106 4 10.1186/s12870-018-1245-1 NA NA t3827.T001641 QTL_on_Chr7 4 PH (Plant height) inclusive composite interval map RIL recombinant inbred line NA 7 2149821 0 7 2075414 0 105 3 10.1186/s12870-018-1245-1 NA NA t3827.T001642 QTL_on_LG1 4 PH (Plant height) composite interval mapping RIL recombinant inbred line Ca1_2856003 NA 0 0 Ca1_5093607 0 0 12.91 4 10.1186/s12870-018-1245-1 NA NA t3827.T001643 QTL_on_LG1 4 PH (Plant height) composite interval mapping RIL recombinant inbred line ICCM0009a NA 0 0 STMS21 0 0 20.71 6 10.1186/s12870-018-1245-1 NA NA t3827.T001644 QTL_on_LG1 4 PH (Plant height) composite interval mapping RIL recombinant inbred line cpPb_490962 NA 0 0 cpPb_677672 0 0 25.01 4 10.1186/s12870-018-1245-1 NA NA t3827.T001645 QTL_on_LG1 4 PH (Plant height) composite interval mapping RIL recombinant inbred line cpPb_171485 NA 0 0 STMS21 0 0 5.51 4 10.1186/s12870-018-1245-1 NA NA t3827.T001646 QTL_on_LG1 4 PH (Plant height) composite interval mapping RIL recombinant inbred line CISR2 NA 0 0 CaM0102 0 0 55.81 3 10.1186/s12870-018-1245-1 NA NA t3827.T001647 QTL_on_LG1 4 PH (Plant height) composite interval mapping RIL recombinant inbred line Ca1_2855927 NA 0 0 Ca1_3047634 0 0 9.31 4 10.1186/s12870-018-1245-1 NA NA t3827.T001648 QTL_on_LG3 4 PH (Plant height) composite interval mapping RIL recombinant inbred line Ca3_31618829 NA 0 0 Ca3_31631534 0 0 54.31 3 10.1186/s12870-018-1245-1 NA NA t3827.T001649 QTL_on_LG4 4 PH (Plant height) composite interval mapping RIL recombinant inbred line Ca4_40059880 NA 0 0 Ca4_39719606 0 0 43.11 3 10.1186/s12870-018-1245-1 NA NA t3827.T001650 QTL_on_LG4 4 PH (Plant height) composite interval mapping RIL recombinant inbred line ICCM0249 NA 0 0 NCPGR127 0 0 55.51 3 10.1186/s12870-018-1245-1 NA NA t3827.T001651 QTL_on_LG4 4 PH (Plant height) composite interval mapping RIL recombinant inbred line ICCM0249 NA 0 0 NCPGR127 0 0 56.51 5 10.1186/s12870-018-1245-1 NA NA t3827.T001652 QTL_on_LG4 4 PH (Plant height) composite interval mapping RIL recombinant inbred line ICCM0249 NA 0 0 NCPGR127 0 0 56.51 6 10.1186/s12870-018-1245-1 NA NA t3827.T001653 QTL_on_LG4 4 PH (Plant height) composite interval mapping RIL recombinant inbred line Ca4_15957070 NA 0 0 Ca4_16149998 0 0 61.31 0 10.1186/s12870-018-1245-1 NA NA t3827.T001654 QTL_on_LG4 4 PH (Plant height) composite interval mapping RIL recombinant inbred line Ca4_15957070 NA 0 0 Ca4_16149998 0 0 61.31 0 10.1186/s12870-018-1245-1 NA NA t3827.T001655 QTL_on_LG4 4 PH (Plant height) composite interval mapping RIL recombinant inbred line Ca4_16046928 NA 0 0 ICCM0249 0 0 62.31 8 10.1186/s12870-018-1245-1 NA NA t3827.T001656 QTL_on_LG4 4 PH (Plant height) composite interval mapping RIL recombinant inbred line ICCM0065 NA 0 0 Ca4_12558541 0 0 67.71 27 10.1186/s12870-018-1245-1 NA NA t3827.T001657 QTL_on_LG4 4 PH (Plant height) composite interval mapping RIL recombinant inbred line ICCM0065 NA 0 0 Ca4_12558541 0 0 67.71 27 10.1186/s12870-018-1245-1 NA NA t3827.T001658 QTL_on_LG4 4 PH (Plant height) composite interval mapping RIL recombinant inbred line TAA170 NA 0 0 NCPGR21 0 0 69.11 13 10.1186/s12870-018-1245-1 NA NA t3827.T001659 QTL_on_LG4 4 PH (Plant height) composite interval mapping RIL recombinant inbred line TAA170 NA 0 0 NCPGR21 0 0 69.11 20 10.1186/s12870-018-1245-1 NA NA t3827.T001660 QTL_on_LG4 4 PH (Plant height) composite interval mapping RIL recombinant inbred line TAA170 NA 0 0 NCPGR21 0 0 69.11 23 10.1186/s12870-018-1245-1 NA NA t3827.T001661 QTL_on_LG4 4 PH (Plant height) composite interval mapping RIL recombinant inbred line Ca4_11441604 NA 0 0 Ca4_12982420 0 0 72.41 19 10.1186/s12870-018-1245-1 NA NA t3827.T001662 QTL_on_LG4 4 PH (Plant height) composite interval mapping RIL recombinant inbred line Ca4_11441604 NA 0 0 Ca4_12982420 0 0 72.41 27 10.1186/s12870-018-1245-1 NA NA t3827.T001663 QTL_on_LG4 4 PH (Plant height) composite interval mapping RIL recombinant inbred line Ca4_11441604 NA 0 0 Ca4_12982420 0 0 72.41 29 10.1186/s12870-018-1245-1 NA NA t3827.T001664 QTL_on_LG4 4 PH (Plant height) composite interval mapping RIL recombinant inbred line TR11 NA 0 0 GA24 0 0 78.01 4 10.1186/s12870-018-1245-1 NA NA t3827.T001665 QTL_on_LG4 4 PH (Plant height) composite interval mapping RIL recombinant inbred line GA24 NA 0 0 STMS11 0 0 79.01 8 10.1186/s12870-018-1245-1 NA NA t3827.T001666 QTL_on_LG4 4 PH (Plant height) composite interval mapping RIL recombinant inbred line TR11 NA 0 0 GA24 0 0 79.01 8 10.1186/s12870-018-1245-1 NA NA t3827.T001667 QTL_on_LG4 4 PH (Plant height) composite interval mapping RIL recombinant inbred line STMS11 NA 0 0 cpPb_680552 0 0 79.61 5 10.1186/s12870-018-1245-1 NA NA t3827.T001668 QTL_on_LG6 4 PH (Plant height) composite interval mapping RIL recombinant inbred line TR7 NA 0 0 ICCeM051 0 0 17.11 4 10.1186/s12870-018-1245-1 NA NA t3827.T001669 QTL_on_LG6 4 PH (Plant height) composite interval mapping RIL recombinant inbred line ICCeM0051 NA 0 0 scaffold96_277735 0 0 17.71 3 10.1186/s12870-018-1245-1 NA NA t3827.T001670 QTL_on_LG6 4 PH (Plant height) composite interval mapping RIL recombinant inbred line TA120 NA 0 0 CaM0389 0 0 21.01 4 10.1186/s12870-018-1245-1 NA NA t3827.T001671 QTL_on_LG6 4 PH (Plant height) composite interval mapping RIL recombinant inbred line TA120 NA 0 0 Ca6_22208093 0 0 23.41 3 10.1186/s12870-018-1245-1 NA NA t3827.T001672 QTL_on_LG6 4 PH (Plant height) composite interval mapping RIL recombinant inbred line ICCeM051 NA 0 0 TR7 0 0 26.51 3 10.1186/s12870-018-1245-1 NA NA t3827.T001673 QTL_on_LG6 4 PH (Plant height) composite interval mapping RIL recombinant inbred line TR7 NA 0 0 CaM1790 0 0 27.21 4 10.1186/s12870-018-1245-1 NA NA t3827.T001674 QTL_on_LG6 4 PH (Plant height) composite interval mapping RIL recombinant inbred line Ca6_17129574 NA 0 0 Ca6_17096214 0 0 46.41 4 10.1186/s12870-018-1245-1 NA NA t3827.T001675 QTL_on_LG6 4 PH (Plant height) composite interval mapping RIL recombinant inbred line Ca6_17129574 NA 0 0 Ca6_17096214 0 0 46.41 5 10.1186/s12870-018-1245-1 NA NA t3827.T001676 QTL_on_LG6 4 PH (Plant height) composite interval mapping RIL recombinant inbred line Ca6_13340012 NA 0 0 Ca6_13625388 0 0 51.51 6 10.1186/s12870-018-1245-1 NA NA t3827.T001677 QTL_on_LG6 4 PH (Plant height) composite interval mapping RIL recombinant inbred line Ca6_13340012 NA 0 0 Ca6_13625388 0 0 51.51 6 10.1186/s12870-018-1245-1 NA NA t3827.T001678 QTL_on_LG6 4 PH (Plant height) composite interval mapping RIL recombinant inbred line Ca6_58908024 NA 0 0 Ca6_10670368 0 0 57.81 5 10.1186/s12870-018-1245-1 NA NA t3827.T001679 QTL_on_LG6 4 PH (Plant height) composite interval mapping RIL recombinant inbred line Ca6_10215262 NA 0 0 Ca6_10670582 0 0 58.51 5 10.1186/s12870-018-1245-1 NA NA t3827.T001680 QTL_on_LG6 4 PH (Plant height) composite interval mapping RIL recombinant inbred line Ca6_10020187 NA 0 0 Ca6_8170170 0 0 63.61 4 10.1186/s12870-018-1245-1 NA NA t3827.T001681 QTL_on_LG6 4 PH (Plant height) composite interval mapping RIL recombinant inbred line Ca6_10020187 NA 0 0 Ca6_8170170 0 0 64.61 6 10.1186/s12870-018-1245-1 NA NA t3827.T001682 QTL_on_LG6 4 PH (Plant height) composite interval mapping RIL recombinant inbred line NCPGR202 NA 0 0 CaM1760 0 0 75.41 3 10.1186/s12870-018-1245-1 NA NA t3827.T001683 QTL_on_LG6 4 PH (Plant height) composite interval mapping RIL recombinant inbred line NCPGR202 NA 0 0 CaM1760 0 0 75.41 4 10.1186/s12870-018-1245-1 NA NA t3827.T001684 QTL_on_LG6 4 PH (Plant height) composite interval mapping RIL recombinant inbred line NCPGR4 NA 0 0 TA106 0 0 86.21 3 10.1186/s12870-018-1245-1 NA NA t3827.T001685 QTL_on_LG7 4 PH (Plant height) composite interval mapping RIL recombinant inbred line STMS14 NA 0 0 STMS9 0 0 12.91 4 10.1186/s12870-018-1245-1 NA NA t3827.T001686 QTL_on_LG7 4 PH (Plant height) composite interval mapping RIL recombinant inbred line STMS14 NA 0 0 STMS9 0 0 12.91 5 10.1186/s12870-018-1245-1 NA NA t3827.T001687 QTL_on_LG7 4 PH (Plant height) composite interval mapping RIL recombinant inbred line Ca7_14470549 NA 0 0 ICCeM0050 0 0 13.71 4 10.1186/s12870-018-1245-1 NA NA t3827.T001688 QTL_on_LG7 4 PH (Plant height) composite interval mapping RIL recombinant inbred line Ca7_38283909 NA 0 0 Ca7_35342271 0 0 19.61 5 10.1186/s12870-018-1245-1 NA NA t3827.T001689 QTL_on_LG7 4 PH (Plant height) composite interval mapping RIL recombinant inbred line CaM2155 NA 0 0 CaM0111 0 0 37.31 5 10.1186/s12870-018-1245-1 NA NA t3827.T001690 QTL_on_LG7 4 PH (Plant height) composite interval mapping RIL recombinant inbred line CaM2155 NA 0 0 CaM0111 0 0 37.31 6 10.1186/s12870-018-1245-1 NA NA t3827.T001691 QTL_on_LG7 4 PH (Plant height) composite interval mapping RIL recombinant inbred line CaM0111 NA 0 0 NCPGR99 0 0 37.61 4 10.1186/s12870-018-1245-1 NA NA t3827.T001692 QTL_on_LG7 4 PH (Plant height) composite interval mapping RIL recombinant inbred line CaM1988 NA 0 0 Ca7_31192474 0 0 39.11 3 10.1186/s12870-018-1245-1 NA NA t3827.T001693 QTL_on_LG7 4 PH (Plant height) composite interval mapping RIL recombinant inbred line CaM1988 NA 0 0 Ca7_31192474 0 0 39.11 4 10.1186/s12870-018-1245-1 NA NA t3827.T001694 QTL_on_LG7 4 PH (Plant height) composite interval mapping RIL recombinant inbred line Ca7_12390774 NA 0 0 ICCM199c 0 0 4.51 7 10.1186/s12870-018-1245-1 NA NA t3827.T001695 QTL_on_LG7 4 PH (Plant height) composite interval mapping RIL recombinant inbred line TA180 NA 0 0 ICCM197a 0 0 43.31 3 10.1186/s12870-018-1245-1 NA NA t3827.T001696 QTL_on_LG7 4 PH (Plant height) composite interval mapping RIL recombinant inbred line Ca7_30004767 NA 0 0 TA142 0 0 45.41 4 10.1186/s12870-018-1245-1 NA NA t3827.T001697 QTL_on_LG7 4 PH (Plant height) composite interval mapping RIL recombinant inbred line Ca7_30004767 NA 0 0 TA142 0 0 45.41 5 10.1186/s12870-018-1245-1 NA NA t3827.T001698 QTL_on_LG7 4 PH (Plant height) composite interval mapping RIL recombinant inbred line Ca7_30004767 NA 0 0 TA142 0 0 45.41 6 10.1186/s12870-018-1245-1 NA NA t3827.T001699 QTL_on_LG7 4 PH (Plant height) composite interval mapping RIL recombinant inbred line Ca7_12390774 NA 0 0 ICCM199c 0 0 5.51 6 10.1186/s12870-018-1245-1 NA NA t3827.T001700 QTL_on_LG7 4 PH (Plant height) composite interval mapping RIL recombinant inbred line TA76s NA 0 0 TA142 0 0 62.41 3 10.1186/s12870-018-1245-1 NA NA t3827.T001701 QTL_on_LG7 4 PH (Plant height) composite interval mapping RIL recombinant inbred line TA76s NA 0 0 TA142 0 0 63.41 4 10.1186/s12870-018-1245-1 NA NA t3827.T001702 QTL_on_LG7 4 PH (Plant height) composite interval mapping RIL recombinant inbred line TA76s NA 0 0 TR24 0 0 63.51 3 10.1186/s12870-018-1245-1 NA NA t3827.T001703 QTL_on_LG8 4 PH (Plant height) composite interval mapping RIL recombinant inbred line CaM1918 NA 0 0 NCPGR170 0 0 26.91 3 10.1186/s12870-018-1245-1 NA NA t3827.T001704 QTL_on_LG8 4 PH (Plant height) composite interval mapping RIL recombinant inbred line NCPGR89 NA 0 0 NCPGR146 0 0 27.61 3 10.1186/s12870-018-1245-1 NA NA t3827.T001705 QTL_on_LG8 4 PH (Plant height) composite interval mapping RIL recombinant inbred line Ca8_8270503 NA 0 0 CaM1918 0 0 36.31 3 10.1186/s12870-018-1245-1 NA NA t3827.T001706 QTL_on_LG8 4 PH (Plant height) composite interval mapping RIL recombinant inbred line Ca8_8270503 NA 0 0 CaM1918 0 0 36.31 4 10.1186/s12870-018-1245-1 NA NA t3827.T001707 QTL_on_LG8 4 PH (Plant height) composite interval mapping RIL recombinant inbred line H1H14 NA 0 0 TA25 0 0 37.51 3 10.1186/s12870-018-1245-1 NA NA t3827.T001708 QTL_on_LG8 4 PH (Plant height) composite interval mapping RIL recombinant inbred line H1H14 NA 0 0 TA25 0 0 37.51 3 10.1186/s12870-018-1245-1 NA NA t3827.T001709 QTL_on_LG8 4 PH (Plant height) composite interval mapping RIL recombinant inbred line CaM0812 NA 0 0 Ca8_4617623 0 0 56.11 3 10.1186/s12870-018-1245-1 NA NA t3827.T001710 QTL_on_LG8 4 PH (Plant height) composite interval mapping RIL recombinant inbred line CaM0812 NA 0 0 Ca8_4617623 0 0 56.11 4 10.1186/s12870-018-1245-1 NA NA t3827.T001711 QTL_on_Chr4 4 PHG (Plant height growth rate) inclusive composite interval map RIL recombinant inbred line NA 4 13239546 0 4 13378761 0 45 12 10.1186/s12870-018-1245-1 NA NA t3827.T001712 QTL_on_Chr4 4 PHG (Plant height growth rate) inclusive composite interval map RIL recombinant inbred line NA 4 13239546 0 4 13378761 0 45 14 10.1186/s12870-018-1245-1 NA NA t3827.T001713 QTL_on_Chr4 4 PHG (Plant height growth rate) inclusive composite interval map RIL recombinant inbred line NA 4 13239546 0 4 13378761 0 45 7 10.1186/s12870-018-1245-1 NA NA t3827.T001714 QTL_on_Chr4 4 PHG (Plant height growth rate) inclusive composite interval map RIL recombinant inbred line NA 4 3535309 0 4 3596208 0 9 2 10.1186/s12870-018-1245-1 NA NA t3827.T001715 QTL_on_Chr7 4 PHG (Plant height growth rate) inclusive composite interval map RIL recombinant inbred line NA 7 2149821 0 7 2075414 0 105 5 10.1186/s12870-018-1245-1 NA NA t3827.T001716 QTL_on_LG4 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line NCPGR91 NA 0 0 TR11 0 0 103.31 3 10.1186/s12870-018-1245-1 NA NA t3827.T001717 QTL_on_LG4 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line NCPGR91 NA 0 0 TR11 0 0 104.31 3 10.1186/s12870-018-1245-1 NA NA t3827.T001718 QTL_on_LG4 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line ICCM0249 NA 0 0 NCPGR127 0 0 54.51 3 10.1186/s12870-018-1245-1 NA NA t3827.T001719 QTL_on_LG4 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line Ca4_15925936 NA 0 0 CaM1903 0 0 58.91 7 10.1186/s12870-018-1245-1 NA NA t3827.T001720 QTL_on_LG4 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line Ca4_15942388 NA 0 0 Ca4_15651804 0 0 59.41 5 10.1186/s12870-018-1245-1 NA NA t3827.T001721 QTL_on_LG4 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line Ca4_15957070 NA 0 0 Ca4_16149998 0 0 61.31 9 10.1186/s12870-018-1245-1 NA NA t3827.T001722 QTL_on_LG4 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line Ca4_16046928 NA 0 0 ICCM0249 0 0 62.31 7 10.1186/s12870-018-1245-1 NA NA t3827.T001723 QTL_on_LG4 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line ICCM0065 NA 0 0 Ca4_12558541 0 0 67.71 14 10.1186/s12870-018-1245-1 NA NA t3827.T001724 QTL_on_LG4 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line Ca4_13588956 NA 0 0 Ca4_13699663 0 0 68.71 17 10.1186/s12870-018-1245-1 NA NA t3827.T001725 QTL_on_LG4 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line Ca4_13588956 NA 0 0 Ca4_13699663 0 0 68.71 9 10.1186/s12870-018-1245-1 NA NA t3827.T001726 QTL_on_LG4 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line TAA170 NA 0 0 NCPGR21 0 0 69.11 11 10.1186/s12870-018-1245-1 NA NA t3827.T001727 QTL_on_LG4 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line TAA170 NA 0 0 NCPGR21 0 0 69.11 13 10.1186/s12870-018-1245-1 NA NA t3827.T001728 QTL_on_LG4 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line TAA170 NA 0 0 NCPGR21 0 0 69.11 5 10.1186/s12870-018-1245-1 NA NA t3827.T001729 QTL_on_LG4 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line Ca4_13687456 NA 0 0 TAA170 0 0 73.21 9 10.1186/s12870-018-1245-1 NA NA t3827.T001730 QTL_on_LG4 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line Ca4_13687456 NA 0 0 TAA170 0 0 74.21 17 10.1186/s12870-018-1245-1 NA NA t3827.T001731 QTL_on_LG4 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line Ca4_13687456 NA 0 0 TAA170 0 0 75.21 14 10.1186/s12870-018-1245-1 NA NA t3827.T001732 QTL_on_LG4 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line TR11 NA 0 0 GA24 0 0 78.01 4 10.1186/s12870-018-1245-1 NA NA t3827.T001733 QTL_on_LG4 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line GA24 NA 0 0 STMS11 0 0 79.01 6 10.1186/s12870-018-1245-1 NA NA t3827.T001734 QTL_on_LG4 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line TR11 NA 0 0 GA24 0 0 79.01 7 10.1186/s12870-018-1245-1 NA NA t3827.T001735 QTL_on_LG4 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line CaM0856 NA 0 0 Tp684964 0 0 85.01 4 10.1186/s12870-018-1245-1 NA NA t3827.T001736 QTL_on_LG4 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line Tp684964 NA 0 0 Ca4_5390317 0 0 90.31 4 10.1186/s12870-018-1245-1 NA NA t3827.T001737 QTL_on_LG6 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line Ca6_13340012 NA 0 0 Ca6_13625388 0 0 51.51 3 10.1186/s12870-018-1245-1 NA NA t3827.T001738 QTL_on_LG6 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line Ca6_10215262 NA 0 0 Ca6_10670582 0 0 58.51 3 10.1186/s12870-018-1245-1 NA NA t3827.T001739 QTL_on_LG7 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line CaM2041 NA 0 0 CaM2131 0 0 53.01 3 10.1186/s12870-018-1245-1 NA NA t3827.T001740 QTL_on_LG7 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line TA64 NA 0 0 TR24 0 0 61.41 3 10.1186/s12870-018-1245-1 NA NA t3827.T001741 QTL_on_LG8 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line CaM1918 NA 0 0 NCPGR170 0 0 22.91 3 10.1186/s12870-018-1245-1 NA NA t3827.T001742 QTL_on_LG8 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line CaM1918 NA 0 0 NCPGR170 0 0 22.91 3 10.1186/s12870-018-1245-1 NA NA t3827.T001743 QTL_on_LG8 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line Ca8_8270503 NA 0 0 CaM1918 0 0 37.31 3 10.1186/s12870-018-1245-1 NA NA t3827.T001744 QTL_on_LG8 4 PHG (Plant height growth rate) composite interval mapping RIL recombinant inbred line Ca8_8270503 NA 0 0 CaM1918 0 0 37.31 4 10.1186/s12870-018-1245-1 NA NA t3827.T001745 QTL_on_Chr4 4 PL (Projected Leaf area) inclusive composite interval map RIL recombinant inbred line NA 4 13048918 0 4 13097584 0 44 6 10.1186/s12870-018-1245-1 NA NA t3827.T001746 QTL_on_Chr4 4 PL (Projected Leaf area) inclusive composite interval map RIL recombinant inbred line NA 4 13393647 0 4 13547009 0 46 4 10.1186/s12870-018-1245-1 NA NA t3827.T001747 QTL_on_Chr4 4 PL (Projected Leaf area) inclusive composite interval map RIL recombinant inbred line NA 4 13393647 0 4 13547009 0 46 4 10.1186/s12870-018-1245-1 NA NA t3827.T001748 QTL_on_LG4 4 PL (Projected Leaf area) composite interval mapping RIL recombinant inbred line ICCM0249 NA 0 0 NCPGR127 0 0 54.51 3 10.1186/s12870-018-1245-1 NA NA t3827.T001749 QTL_on_LG4 4 PL (Projected Leaf area) composite interval mapping RIL recombinant inbred line CaM1903 NA 0 0 ICCM0249 0 0 54.51 5 10.1186/s12870-018-1245-1 NA NA t3827.T001750 QTL_on_LG4 4 PL (Projected Leaf area) composite interval mapping RIL recombinant inbred line Ca4_15957070 NA 0 0 Ca4_16149998 0 0 61.31 3 10.1186/s12870-018-1245-1 NA NA t3827.T001751 QTL_on_LG4 4 PL (Projected Leaf area) composite interval mapping RIL recombinant inbred line Ca4_15957070 NA 0 0 Ca4_16149998 0 0 61.31 4 10.1186/s12870-018-1245-1 NA NA t3827.T001752 QTL_on_LG4 4 PL (Projected Leaf area) composite interval mapping RIL recombinant inbred line NCPGR127 NA 0 0 TAA170 0 0 67.61 6 10.1186/s12870-018-1245-1 NA NA t3827.T001753 QTL_on_LG4 4 PL (Projected Leaf area) composite interval mapping RIL recombinant inbred line Ca4_13588956 NA 0 0 Ca4_13699663 0 0 68.71 7 10.1186/s12870-018-1245-1 NA NA t3827.T001754 QTL_on_LG4 4 PL (Projected Leaf area) composite interval mapping RIL recombinant inbred line Ca4_13588956 NA 0 0 Ca4_13699663 0 0 68.71 9 10.1186/s12870-018-1245-1 NA NA t3827.T001755 QTL_on_LG4 4 PL (Projected Leaf area) composite interval mapping RIL recombinant inbred line Ca4_13840251 NA 0 0 Ca4_11276225 0 0 68.81 5 10.1186/s12870-018-1245-1 NA NA t3827.T001756 QTL_on_LG4 4 PL (Projected Leaf area) composite interval mapping RIL recombinant inbred line TAA170 NA 0 0 NCPGR21 0 0 70.11 6 10.1186/s12870-018-1245-1 NA NA t3827.T001757 QTL_on_LG4 4 PL (Projected Leaf area) composite interval mapping RIL recombinant inbred line TAA170 NA 0 0 NCPGR21 0 0 70.11 6 10.1186/s12870-018-1245-1 NA NA t3827.T001758 QTL_on_LG4 4 PL (Projected Leaf area) composite interval mapping RIL recombinant inbred line Ca4_13687456 NA 0 0 TAA170 0 0 76.21 6 10.1186/s12870-018-1245-1 NA NA t3827.T001759 QTL_on_LG4 4 PL (Projected Leaf area) composite interval mapping RIL recombinant inbred line GA24 NA 0 0 STMS11 0 0 79.01 3 10.1186/s12870-018-1245-1 NA NA t3827.T001760 QTL_on_LG4 4 PL (Projected Leaf area) composite interval mapping RIL recombinant inbred line TR11 NA 0 0 GA24 0 0 79.01 3 10.1186/s12870-018-1245-1 NA NA t3827.T001761 QTL_on_LG5 4 PL (Projected Leaf area) composite interval mapping RIL recombinant inbred line CaM0038 NA 0 0 CaM0639 0 0 14.41 3 10.1186/s12870-018-1245-1 NA NA t3827.T001762 QTL_on_LG8 4 PL (Projected Leaf area) composite interval mapping RIL recombinant inbred line NCPGR164 NA 0 0 Ca8_4106644 0 0 58.91 3 10.1186/s12870-018-1245-1 NA NA t3827.T001763 4 Plant height GWAS ICC 12299 x ICC 8261 F7 Ca_Desi_SNP526 NA 0 0 0 0 2.1 × 10-6 10.1038/srep27968 NA NA t3827.T001764 4 Plant height GWAS ICC 12299 x ICC 8261 F7 Ca_Desi_SNP849 NA 0 0 0 0 4.2 × 10-6 10.1038/srep27968 NA NA t3827.T001765 4 Plant height GWAS ICC 12299 x ICC 8261 F7 Ca_Desi_SNP1252 NA 0 0 0 0 1.3 × 10-6 10.1038/srep27968 NA NA t3827.T001766 4 Plant height GWAS ICC 12299 x ICC 8261 F7 Ca_Desi_SNP1806 NA 0 0 0 0 1.9 × 10-6 10.1038/srep27968 NA NA t3827.T001767 4 Plant height GWAS ICC 12299 x ICC 8261 F7 Ca_Desi_SNP3315 NA 0 0 0 0 3.9 × 10-6 10.1038/srep27968 NA NA t3827.T001768 4 Plant height GWAS ICC 12299 x ICC 8261 F7 Ca_Desi_SNP3492 NA 0 0 0 0 4.8 × 10-6 10.1038/srep27968 NA NA t3827.T001769 4 Plant height ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA CaLG04 139220 0 bin_4_13378761 0 0 0.23 24.34 10.1038/srep15296 NA NA t3827.T001770 4 Plant height Interval mapping ICC 12299 x ICC 8261 F7 Ca_Desi_SNP525 NA 0 0 Ca_Desi_SNP528 0 0 56.984 - 57.223 10.7 10.1038/srep27968 NA NA t3827.T001771 4 Plant height Interval mapping ICC 12299 x ICC 8261 F7 Ca_DesiSNP848 NA 0 0 Ca_Desi_SNP851 0 0 29.496 - 29.852 8.6 10.1038/srep27968 NA NA t3827.T001772 4 Plant height Interval mapping ICC 12299 x ICC 8261 F7 Ca_ DesiSNP1251 NA 0 0 Ca_Desi_SNP1253 0 0 26.358 - 26.536 8.1 10.1038/srep27968 NA NA t3827.T001773 4 Plant height Interval mapping ICC 12299 x ICC 8261 F7 Ca_Desi_ SNP1805 NA 0 0 Ca_Desi_SNP1807 0 0 28.738 - 28.796 7.8 10.1038/srep27968 NA NA t3827.T001774 4 Plant height Interval mapping ICC 12299 x ICC 8261 F7 Ca_Desi_SNP3314 NA 0 0 Ca_Desi_SNP3316 0 0 63.792 - 64.185 9.5 10.1038/srep27968 NA NA t3827.T001775 4 Plant height Interval mapping ICC 12299 x ICC 8261 F7 Ca_Desi_SNP3491 NA 0 0 Ca_Desi_SNP3493 0 0 44.194 - 44.882 6.1 10.1038/srep27968 NA NA t3827.T001776 4 Plant height Interval mapping ICCV 96029 × CDC Frontier RIL CAV1SC28.1P1164750 NA 0 0 0 0 32.7 7.9 10.1139/gen-2016-0036 NA NA t3827.T001777 4 Plant height Interval mapping ICCV 96029 × CDC Frontier RIL CAV1SC390.1P214265 NA 0 0 0 0 63.8 4.9 10.1139/gen-2016-0036 NA NA t3827.T001778 4 Plant height Interval mapping SBD377 × BGD112 F11 PIP151 NA 0 0 CEST48 0 0 9.098 3.25 10.1007/s11033-015-3925-3 NA NA t3827.T001779 4 Plant height Interval mapping SBD377 × BGD112 F11 CEST129 NA 0 0 CESSR221 0 0 17.793 2.7 10.1007/s11033-015-3925-3 NA NA t3827.T001780 4 Plant height ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA 0 0 bin_4_13378761 0 0 10.1651 10.1038/srep15296 NA NA t3827.T001781 4 Plant height ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA 0 0 bin_4_13378761 0 0 11.7294 10.1038/srep15296 NA NA t3827.T001782 4 Plant height ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA 0 0 bin_4_13378761 0 0 13.9897 10.1038/srep15296 NA NA t3827.T001783 4 Plant height ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA 0 0 bin_4_13378761 0 0 15.1731 10.1038/srep15296 NA NA t3827.T001784 4 Plant height ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA 0 0 bin_4_13378761 0 0 21.9689 10.1038/srep15296 NA NA t3827.T001785 4 Plant height ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA 0 0 bin_4_13378761 0 0 24.3412 10.1038/srep15296 NA NA t3827.T001786 4 Plant height ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_48635948 NA 0 0 bin_4_48732122 0 0 3.0269 10.1038/srep15296 NA NA t3827.T001787 4 Plant height ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_40000893 NA 0 0 bin_4_40023390 0 0 3.3272 10.1038/srep15296 NA NA t3827.T001788 4 Plant height ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_45192563 NA 0 0 bin_4_45238182 0 0 3.929 10.1038/srep15296 NA NA t3827.T001789 4 Plant height ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_11210420 NA 0 0 bin_4_11690035 0 0 4.0291 10.1038/srep15296 NA NA t3827.T001790 4 Plant height ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13393647 NA 0 0 bin_4_13547009 0 0 4.0969 10.1038/srep15296 NA NA t3827.T001791 4 Plant height ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_12586721 NA 0 0 bin_4_12650792 0 0 4.4032 10.1038/srep15296 NA NA t3827.T001792 4 Plant height ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA 0 0 bin_4_13378761 0 0 7.8118 10.1038/srep15296 NA NA t3827.T001793 4 Plant height ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA 0 0 bin_4_13378761 0 0 9.0152 10.1038/srep15296 NA NA t3827.T001794 4 Plant height ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_6_7491206 NA 0 0 bin_6_7526573 0 0 3.2424 10.1038/srep15296 NA NA t3827.T001795 4 Plant height ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_6_6943324 NA 0 0 bin_6_6999653 0 0 3.2948 10.1038/srep15296 NA NA t3827.T001796 4 Plant height ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_6_3677353 NA 0 0 bin_6_3683132 0 0 3.9628 10.1038/srep15296 NA NA t3827.T001797 4 Plant height ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_6_6943324 NA 0 0 bin_6_6999653 0 0 4.5333 10.1038/srep15296 NA NA t3827.T001798 4 Plant height ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_6_6943324 NA 0 0 bin_6_6999653 0 0 4.6549 10.1038/srep15296 NA NA t3827.T001799 4 Plant height ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_6_3677353 NA 0 0 bin_6_3683132 0 0 5.7839 10.1038/srep15296 NA NA t3827.T001800 4 Plant height ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_6_3613490 NA 0 0 bin_6_3632957 0 0 6.4321 10.1038/srep15296 NA NA t3827.T001801 4 Plant height ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 3.1913 10.1038/srep15296 NA NA t3827.T001802 4 Plant height ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_4015752 NA 0 0 bin_8_3992475 0 0 3.5619 10.1038/srep15296 NA NA t3827.T001803 4 Plant height ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_3992475 NA 0 0 bin_8_3962288 0 0 4.6849 10.1038/srep15296 NA NA t3827.T001804 4 Plant height ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 6.7752 10.1038/srep15296 NA NA t3827.T001805 4 Plant height ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_3018346 NA 0 0 bin_8_3013230 0 0 8.2346 10.1038/srep15296 NA NA t3827.T001806 4 Plant height Interval mapping ICC 4958 × ICC 1882 RIL CaM0520 NA 0 0 ICCeM0050 0 0 3.4110000000000005 3.7481 10.1007/s00438-014-0932-3 NA NA t3827.T001807 4 Plant height Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13724666 NA 0 0 Ca4_11276225 0 0 1.051000000000002 21.513572 10.1007/s00438-014-0932-3 NA NA t3827.T001808 4 Plant height Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12558541 NA 0 0 Ca4_11276225 0 0 1.8120000000000118 10.948969 10.1007/s00438-014-0932-3 NA NA t3827.T001809 4 Plant height Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12558541 NA 0 0 Ca4_11276225 0 0 1.8120000000000118 12.831705 10.1007/s00438-014-0932-3 NA NA t3827.T001810 4 Plant height Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12558541 NA 0 0 Ca4_11276225 0 0 1.8120000000000118 26.640608 10.1007/s00438-014-0932-3 NA NA t3827.T001811 4 Plant height Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12558541 NA 0 0 Ca4_11276225 0 0 1.8120000000000118 9.528773 10.1007/s00438-014-0932-3 NA NA t3827.T001812 4 Plant height Interval mapping ICC 4958 × ICC 1882 RIL ICCM0065 NA 0 0 Ca4_13588956 0 0 2.3859999999999957 18.115092 10.1007/s00438-014-0932-3 NA NA t3827.T001813 4 Plant height Interval mapping ICC 4958 × ICC 1882 RIL ICCM0065 NA 0 0 Ca4_11276225 0 0 3.233000000000004 14.831705 10.1007/s00438-014-0932-3 NA NA t3827.T001814 4 Plant height Interval mapping ICC 4958 × ICC 1882 RIL STMS11 NA 0 0 CaM0615 0 0 3.798000000000002 8.05646 10.1007/s00438-014-0932-3 NA NA t3827.T001815 4 Plant height Interval mapping ICC 4958 × ICC 1882 RIL STMS11 NA 0 0 CaM0615 0 0 3.798000000000002 9.016287 10.1007/s00438-014-0932-3 NA NA t3827.T001816 4 Plant height Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13840227 NA 0 0 TAA170 0 0 4.390000000000001 13.489685 10.1007/s00438-014-0932-3 NA NA t3827.T001817 4 Plant height Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13840227 NA 0 0 TAA170 0 0 4.390000000000001 15.261672 10.1007/s00438-014-0932-3 NA NA t3827.T001818 4 Plant height Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13840227 NA 0 0 TAA170 0 0 4.390000000000001 9.648208 10.1007/s00438-014-0932-3 NA NA t3827.T001819 4 Plant height Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13787649 NA 0 0 TAA170 0 0 4.560999999999993 10.57329 10.1007/s00438-014-0932-3 NA NA t3827.T001820 4 Plant height Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12982420 NA 0 0 TAA170 0 0 4.934999999999988 19.965255 10.1007/s00438-014-0932-3 NA NA t3827.T001821 4 Plant height Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12982420 NA 0 0 TAA170 0 0 4.934999999999988 29.155266 10.1007/s00438-014-0932-3 NA NA t3827.T001822 4 Plant height Interval mapping ICC 4958 × ICC 1882 RIL Ca4_16149998 NA 0 0 ICCM0065 0 0 4.992000000000004 6.449511 10.1007/s00438-014-0932-3 NA NA t3827.T001823 4 Plant height Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13840227 NA 0 0 NCPGR21 0 0 5.365000000000009 11.754615 10.1007/s00438-014-0932-3 NA NA t3827.T001824 4 Plant height Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13840227 NA 0 0 NCPGR21 0 0 5.36500000000001 10.814332 10.1007/s00438-014-0932-3 NA NA t3827.T001825 4 Plant height Interval mapping ICC 4958 × ICC 1882 RIL Ca6_2540711 NA 0 0 CaM0399 0 0 17.935999999999993 3.973941 10.1007/s00438-014-0932-3 NA NA t3827.T001826 4 Plant height Interval mapping ICC 4958 × ICC 1882 RIL CISR117 NA 0 0 Ca7_34277010 0 0 3.017999999999997 5.674267 10.1007/s00438-014-0932-3 NA NA t3827.T001827 4 Plant height Interval mapping ICC 4958 × ICC 1882 RIL Ca7_12390774 NA 0 0 Ca7_33364329 0 0 8.456999999999997 4.62975 10.1007/s00438-014-0932-3 NA NA t3827.T001828 4 Plant height Interval mapping ICC 4958 × ICC 1882 RIL Ca8_4106644 NA 0 0 CISR80 0 0 13.441000000000003 11.368078 10.1007/s00438-014-0932-3 NA NA t3827.T001829 4 Plant height Interval mapping ICC 4958 × ICC 1882 RIL Ca8_4106644 NA 0 0 CISR80 0 0 13.441000000000003 18.751357 10.1007/s00438-014-0932-3 NA NA t3827.T001830 4 Plant height Interval mapping ICC 4958 × ICC 1882 RIL Ca8_4106644 NA 0 0 CISR80 0 0 13.441000000000003 7.418024 10.1007/s00438-014-0932-3 NA NA t3827.T001831 4 Plant height Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 CISR80 0 0 15.125000000000007 7.140065 10.1007/s00438-014-0932-3 NA NA t3827.T001832 4 Plant height Interval mapping ICC 4958 × ICC 1882 RIL NCPGR164 NA 0 0 CISR80 0 0 15.125000000000007 9.281216 10.1007/s00438-014-0932-3 NA NA t3827.T001833 qph-01 4 Plant height (cm) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021161.1.31430073 NA 2 0 0 CNC_021161.1.9956999 0 0 2.28 10.1371/journal.pone.0254957 NA NA t3827.T001834 qph-01 4 Plant height (cm) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021161.1.31430073 NA 2 0 0 CNC_021161.1.9956999 0 0 3.66 10.1371/journal.pone.0254957 NA NA t3827.T001835 qph-02 4 Plant height (cm) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021163.1.38540774 NA 4 0 0 CNC_021163.1.38370939 0 0 3.56 10.1371/journal.pone.0254957 NA NA t3827.T001836 qPLHT1.1 4 Plant height (PLHT) composite interval mapping ICC 4958 X DCP 92-3 RIL population recombinant inbred line AX-123617652 NA 0 0 AX-123644833 0 0 12.7 - 13.4 6.2 10.1371/journal.pone.0251669 NA NA t3827.T001837 qPLHT4.1 4 Plant height (PLHT) composite interval mapping ICC 4958 X DCP 92-3 RIL population recombinant inbred line AX-123615349 NA 0 0 AX-123623881 0 0 216.23 - 223.07 6.6 10.1371/journal.pone.0251669 NA NA t3827.T001838 qPLHT4.1 4 Plant height (PLHT) composite interval mapping ICC 4958 X DCP 92-3 RIL population recombinant inbred line AX-123615349 NA 0 0 AX-123623881 0 0 216.23 - 223.07 8.1 10.1371/journal.pone.0251669 NA NA t3827.T001839 qPLHT5.1 4 Plant height (PLHT) composite interval mapping ICC 4958 X DCP 92-3 RIL population recombinant inbred line AX-123653052 NA 0 0 AX-123631649 0 0 1.07 - 7.62 3.5 10.1371/journal.pone.0251669 NA NA t3827.T001840 qPLHT8.1 4 Plant height (PLHT) composite interval mapping ICC 4958 X DCP 92-3 RIL population recombinant inbred line AX-123638424 NA 0 0 AX-123657820 0 0 13.74 - 14.3 3.6 10.1371/journal.pone.0251669 NA NA t3827.T001841 QTL_on_LG4 4 PLG (Projected Leaf area growth rate) composite interval mapping RIL recombinant inbred line Ca4_48457876 NA 0 0 Ca4_47592455 0 0 2.21 3 10.1186/s12870-018-1245-1 NA NA t3827.T001842 QTL_on_LG4 4 PLG (Projected Leaf area growth rate) composite interval mapping RIL recombinant inbred line ICCM0249 NA 0 0 ICCM0065 0 0 64.51 3 10.1186/s12870-018-1245-1 NA NA t3827.T001843 QTL_on_LG4 4 PLG (Projected Leaf area growth rate) composite interval mapping RIL recombinant inbred line TAA170 NA 0 0 NCPGR21 0 0 69.11 3 10.1186/s12870-018-1245-1 NA NA t3827.T001844 QTL_on_LG7 4 PLG (Projected Leaf area growth rate) composite interval mapping RIL recombinant inbred line CaCISP117 NA 0 0 STMS12 0 0 28.61 3 10.1186/s12870-018-1245-1 NA NA t3827.T001845 4 Pod number QTL-seq Pusa 1103 × ILWC 46 F5 SNP_20990A NA 4 13690423 0 SNP_21161A 14558233 0 10.1093/dnares/dsv036 NA NA t3827.T001846 4 Pod number QTL-seq Pusa 1103 × ILWC 46 F5 SNP_27349A NA 4 31916540 0 SNP_28364A 33716608 0 10.1093/dnares/dsv036 NA NA t3827.T001847 4 Pod number QTL-seq Pusa 256 × ILWC 46 F5 SNP_15561B NA 4 13770030 0 SNP_15696B 14407570 0 10.1093/dnares/dsv036 NA NA t3827.T001848 4 Pod number QTL-seq Pusa 256 × ILWC 46 F5 SNP_18917B NA 4 31916540 0 SNP_19254B 33195624 0 10.1093/dnares/dsv036 NA NA t3827.T001849 4 Pod number Interval mapping Pusa 1103 × ILWC 46 F5 CaPOPI_837 NA 0 0 CaPOPI_1052 0 0 73.96 - 81.99 8.5 10.3389/fpls.2016.01362 NA NA t3827.T001850 4 Pod number Interval mapping Pusa 1103 × ILWC 46 F5 CaPOPI_2652 NA 0 0 CaPOPI_2803 0 0 108.09 - 117.08 11.5 10.3389/fpls.2016.01362 NA NA t3827.T001851 4 Pod number Interval mapping Pusa 1103 × ILWC 46 F5 CaPOPI_2016 NA 0 0 CaPOPI_2049 0 0 45.19 - 52.74 12.7 10.3389/fpls.2016.01362 NA NA t3827.T001852 4 Pod number Interval mapping Pusa 1103 × ILWC 46 and Pusa 256 × ILWC 46 F5 CaPOPI_II_202 NA 0 0 CaPOPI_II_228 0 0 61.8 - 68.3 9.4 10.3389/fpls.2016.01362 NA NA t3827.T001853 4 Pod number Interval mapping Pusa 1103 × ILWC 46 and Pusa 256 × ILWC 46 F5 CaPOPI_II_384 NA 0 0 CaPOPI_II_388 0 0 40.3 - 43 13.8 10.3389/fpls.2016.01362 NA NA t3827.T001854 4 Pod number Interval mapping Pusa 1103 × ILWC 46 and Pusa 256 × ILWC 46 F5 CaPOPI_II_479 NA 0 0 CaPOPI_II_492 0 0 94.9 - 100.6 11.7 10.3389/fpls.2016.01362 NA NA t3827.T001855 4 Pod number Interval mapping Pusa 256 × ILWC 46 F5 CaPOPII_673 NA 0 0 CaPOPII_777 0 0 49.17 - 54.07 6.7 10.3389/fpls.2016.01362 NA NA t3827.T001856 4 Pod number Interval mapping Pusa 256 × ILWC 46 F5 CaPOPII_1347 NA 0 0 CaPOPII_1383 0 0 30.69 - 36.14 11.4 10.3389/fpls.2016.01362 NA NA t3827.T001857 4 Pod number Interval mapping Pusa 256 × ILWC 46 F5 CaPOPII_1680 NA 0 0 CaPOPII_1743 0 0 78.06 - 85.77 9.8 10.3389/fpls.2016.01362 NA NA t3827.T001858 4 Pods/plant ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA CaLG04 139220 0 bin_4_13378761 0 0 0.23 9.82 10.1038/srep15296 NA NA t3827.T001859 4 Pods/plant ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_15082304 NA 0 0 bin_4_15250027 0 0 5.911 10.1038/srep15296 NA NA t3827.T001860 4 Pods/plant ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA 0 0 bin_4_13378761 0 0 9.8179 10.1038/srep15296 NA NA t3827.T001861 4 Pot culture- Days to 50% flowering (days); DF Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T001862 4 Pot culture- Plant height (cm); PHT_G Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T001863 4 Primary branches ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA CaLG08 49660 0 bin_8_5984553 0 0 9.47 5.7 10.1038/srep15296 NA NA t3827.T001864 4 Primary branches ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_1_1824635 NA 0 0 bin_1_1821759 0 0 3.4632 10.1038/srep15296 NA NA t3827.T001865 4 Primary branches ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_7_4537517 NA 0 0 bin_7_4519483 0 0 3.2128 10.1038/srep15296 NA NA t3827.T001866 4 Primary branches ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6167474 NA 0 0 bin_8_6034209 0 0 3.9114 10.1038/srep15296 NA NA t3827.T001867 4 Primary branches ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_6034209 NA 0 0 bin_8_5984553 0 0 5.701 10.1038/srep15296 NA NA t3827.T001868 4 Primary branches Interval mapping ICC 4958 × ICC 1882 RIL CaM0812 NA 0 0 NCPGR164 0 0 8.805999999999997 5.270358 10.1007/s00438-014-0932-3 NA NA t3827.T001869 QTL_on_LG1 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line Ca1_2856003 NA 0 0 Ca1_5093607 0 0 12.91 7 10.1186/s12870-018-1245-1 NA NA t3827.T001870 QTL_on_LG1 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line Ca1_2856003 NA 0 0 Ca1_5093607 0 0 12.91 8 10.1186/s12870-018-1245-1 NA NA t3827.T001871 QTL_on_LG1 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line Ca1_5249868 NA 0 0 ICCM0120 0 0 18.11 4 10.1186/s12870-018-1245-1 NA NA t3827.T001872 QTL_on_LG1 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line Ca1_5249868 NA 0 0 ICCM0120 0 0 18.11 5 10.1186/s12870-018-1245-1 NA NA t3827.T001873 QTL_on_LG1 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line cpPb_677672 NA 0 0 cpPb677690 0 0 25.11 4 10.1186/s12870-018-1245-1 NA NA t3827.T001874 QTL_on_LG1 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line cpPb_677672 NA 0 0 cpPb677690 0 0 25.11 5 10.1186/s12870-018-1245-1 NA NA t3827.T001875 QTL_on_LG4 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line CaM1684 NA 0 0 H1A19 0 0 31.81 8 10.1186/s12870-018-1245-1 NA NA t3827.T001876 QTL_on_LG4 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line CaM0507 NA 0 0 CaM2093 0 0 39.71 13 10.1186/s12870-018-1245-1 NA NA t3827.T001877 QTL_on_LG4 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line CaM0507 NA 0 0 CaM2093 0 0 39.71 9 10.1186/s12870-018-1245-1 NA NA t3827.T001878 QTL_on_LG4 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line CaM0507 NA 0 0 CaM2093 0 0 39.71 9 10.1186/s12870-018-1245-1 NA NA t3827.T001879 QTL_on_LG4 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line Ca4_41032590 NA 0 0 Ca4_41032564 0 0 41.21 11 10.1186/s12870-018-1245-1 NA NA t3827.T001880 QTL_on_LG4 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line Ca4_40062233 NA 0 0 Ca4_40059880 0 0 42.91 7 10.1186/s12870-018-1245-1 NA NA t3827.T001881 QTL_on_LG4 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line Ca4_39042938 NA 0 0 Ca4_38215267 0 0 45.01 13 10.1186/s12870-018-1245-1 NA NA t3827.T001882 QTL_on_LG4 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line Ca4_39042938 NA 0 0 Ca4_38215267 0 0 45.11 13 10.1186/s12870-018-1245-1 NA NA t3827.T001883 QTL_on_LG4 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line scaffold157_106331 NA 0 0 Ca4_30300334 0 0 45.91 7 10.1186/s12870-018-1245-1 NA NA t3827.T001884 QTL_on_LG4 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line cpPb_682025 NA 0 0 CaM1328 0 0 46.21 10 10.1186/s12870-018-1245-1 NA NA t3827.T001885 QTL_on_LG4 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line cpPb_682025 NA 0 0 CaM1328 0 0 46.21 11 10.1186/s12870-018-1245-1 NA NA t3827.T001886 QTL_on_LG4 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line cpPb_682025 NA 0 0 CaM1328 0 0 46.21 7 10.1186/s12870-018-1245-1 NA NA t3827.T001887 QTL_on_LG4 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line CaM0507 NA 0 0 cpPb_490406 0 0 50.61 14 10.1186/s12870-018-1245-1 NA NA t3827.T001888 QTL_on_LG4 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line CaM0507 NA 0 0 cpPb_490406 0 0 50.61 9 10.1186/s12870-018-1245-1 NA NA t3827.T001889 QTL_on_LG4 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line CaM1328 NA 0 0 Ca4_18223721 0 0 50.81 11 10.1186/s12870-018-1245-1 NA NA t3827.T001890 QTL_on_LG4 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line CaM1684 NA 0 0 NCPGR236 0 0 54.01 8 10.1186/s12870-018-1245-1 NA NA t3827.T001891 QTL_on_LG4 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line CaM1903 NA 0 0 ICCM0249 0 0 54.31 7 10.1186/s12870-018-1245-1 NA NA t3827.T001892 QTL_on_LG4 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line Ca4_13588956 NA 0 0 Ca4_13699663 0 0 68.71 3 10.1186/s12870-018-1245-1 NA NA t3827.T001893 QTL_on_LG4 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line TAA170 NA 0 0 NCPGR21 0 0 70.11 3 10.1186/s12870-018-1245-1 NA NA t3827.T001894 QTL_on_LG6 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line TA106 NA 0 0 H1I16 0 0 102.01 3 10.1186/s12870-018-1245-1 NA NA t3827.T001895 QTL_on_LG6 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line TA106 NA 0 0 H1I16 0 0 102.01 6 10.1186/s12870-018-1245-1 NA NA t3827.T001896 QTL_on_LG6 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line TA106 NA 0 0 H1I16 0 0 105.01 6 10.1186/s12870-018-1245-1 NA NA t3827.T001897 QTL_on_LG6 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line GA26 NA 0 0 CaM0399 0 0 112.51 6 10.1186/s12870-018-1245-1 NA NA t3827.T001898 QTL_on_LG6 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line Ca6_17129574 NA 0 0 Ca6_17096214 0 0 46.01 3 10.1186/s12870-018-1245-1 NA NA t3827.T001899 QTL_on_LG6 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line Ca6_17129574 NA 0 0 Ca6_17096214 0 0 46.01 4 10.1186/s12870-018-1245-1 NA NA t3827.T001900 QTL_on_LG6 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line STMS2 NA 0 0 NCPGR93 0 0 60.91 3 10.1186/s12870-018-1245-1 NA NA t3827.T001901 QTL_on_LG6 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line Ca6_8029226 NA 0 0 Ca6_7571792 0 0 67.51 6 10.1186/s12870-018-1245-1 NA NA t3827.T001902 QTL_on_LG6 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line Ca6_7571792 NA 0 0 Ca6_6871350 0 0 68.51 3 10.1186/s12870-018-1245-1 NA NA t3827.T001903 QTL_on_LG6 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line Ca6_4994876 NA 0 0 H1I16 0 0 79.81 7 10.1186/s12870-018-1245-1 NA NA t3827.T001904 QTL_on_LG6 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line Ca6_4994876 NA 0 0 H1I16 0 0 79.81 8 10.1186/s12870-018-1245-1 NA NA t3827.T001905 QTL_on_LG6 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line H1I16 NA 0 0 Ca6_2540711 0 0 85.11 7 10.1186/s12870-018-1245-1 NA NA t3827.T001906 QTL_on_LG6 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line H1I16 NA 0 0 Ca6_2540711 0 0 86.11 8 10.1186/s12870-018-1245-1 NA NA t3827.T001907 QTL_on_LG6 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line NCPGR4 NA 0 0 TA106 0 0 86.21 4 10.1186/s12870-018-1245-1 NA NA t3827.T001908 QTL_on_LG7 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line STMS14 NA 0 0 STMS9 0 0 10.91 4 10.1186/s12870-018-1245-1 NA NA t3827.T001909 QTL_on_LG7 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line NCPGR19 NA 0 0 CaM2041 0 0 12.51 5 10.1186/s12870-018-1245-1 NA NA t3827.T001910 QTL_on_LG7 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line NCPGR19 NA 0 0 CaM2041 0 0 12.51 5 10.1186/s12870-018-1245-1 NA NA t3827.T001911 QTL_on_LG7 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line NCPGR19 NA 0 0 CaM2041 0 0 12.51 5 10.1186/s12870-018-1245-1 NA NA t3827.T001912 QTL_on_LG7 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line Ca7_34277014 NA 0 0 Ca7_46485934 0 0 18.61 7 10.1186/s12870-018-1245-1 NA NA t3827.T001913 QTL_on_LG7 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line Ca7_34277014 NA 0 0 Ca7_46485934 0 0 18.61 8 10.1186/s12870-018-1245-1 NA NA t3827.T001914 QTL_on_LG7 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line Ca7_34277014 NA 0 0 Ca7_46485934 0 0 18.61 9 10.1186/s12870-018-1245-1 NA NA t3827.T001915 QTL_on_LG7 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line CaM1417 NA 0 0 ICCM199c 0 0 24.51 4 10.1186/s12870-018-1245-1 NA NA t3827.T001916 QTL_on_LG7 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line Ca7_33411746 NA 0 0 Ca7_33267485 0 0 27.11 10 10.1186/s12870-018-1245-1 NA NA t3827.T001917 QTL_on_LG7 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line Ca7_33461168 NA 0 0 ICCM197a 0 0 27.51 4 10.1186/s12870-018-1245-1 NA NA t3827.T001918 QTL_on_LG7 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line Ca7_33461168 NA 0 0 ICCM197a 0 0 27.51 6 10.1186/s12870-018-1245-1 NA NA t3827.T001919 QTL_on_LG7 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line cpPb_490874 NA 0 0 CaCISP117 0 0 27.81 6 10.1186/s12870-018-1245-1 NA NA t3827.T001920 QTL_on_LG7 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line CaCISP117 NA 0 0 STMS12 0 0 30.61 5 10.1186/s12870-018-1245-1 NA NA t3827.T001921 QTL_on_LG7 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line CaCISP117 NA 0 0 STMS12 0 0 30.61 7 10.1186/s12870-018-1245-1 NA NA t3827.T001922 QTL_on_LG7 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line CaM1942 NA 0 0 CaM2155 0 0 36.71 3 10.1186/s12870-018-1245-1 NA NA t3827.T001923 QTL_on_LG7 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line CaM0111 NA 0 0 NCPGR99 0 0 37.61 4 10.1186/s12870-018-1245-1 NA NA t3827.T001924 QTL_on_LG7 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line CaM1988 NA 0 0 Ca7_31192474 0 0 40.41 3 10.1186/s12870-018-1245-1 NA NA t3827.T001925 QTL_on_LG7 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line TA180 NA 0 0 ICCM197a 0 0 42.31 3 10.1186/s12870-018-1245-1 NA NA t3827.T001926 QTL_on_LG7 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line Ca7_30004767 NA 0 0 TA142 0 0 43.41 5 10.1186/s12870-018-1245-1 NA NA t3827.T001927 QTL_on_LG7 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line TA142 NA 0 0 NCPGR19 0 0 49.11 4 10.1186/s12870-018-1245-1 NA NA t3827.T001928 QTL_on_LG7 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line TA142 NA 0 0 NCPGR19 0 0 49.11 5 10.1186/s12870-018-1245-1 NA NA t3827.T001929 QTL_on_LG7 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line TA142 NA 0 0 NCPGR19 0 0 49.61 4 10.1186/s12870-018-1245-1 NA NA t3827.T001930 QTL_on_LG8 4 R-3D/PLA (Residuals from 3-D & projected Leaf area) composite interval mapping RIL recombinant inbred line CaM0812 NA 0 0 Ca8_4617623 0 0 56.11 5 10.1186/s12870-018-1245-1 NA NA t3827.T001931 4 R-T ratio ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13393647 NA 0 0 bin_4_13547009 0 0 10.5729 10.1038/srep15296 NA NA t3827.T001932 4 R-T ratio ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13393647 NA 0 0 bin_4_13547009 0 0 5.8854 10.1038/srep15296 NA NA t3827.T001933 qrlwc-01 4 Relative leaf water content (%) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021166.1.25250619 NA 7 0 0 CNC_021166.1.42984094 0 0 3.34 10.1371/journal.pone.0254957 NA NA t3827.T001934 4 Root dry weight/total plant dry weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12558541 NA 0 0 Ca4_11276225 0 0 1.8120000000000118 7.027144 10.1007/s00438-014-0932-3 NA NA t3827.T001935 4 Root dry weight/total plant dry weight Interval mapping ICC 4958 × ICC 1882 RIL ICCM0065 NA 0 0 Ca4_13588956 0 0 2.3859999999999957 7.181325 10.1007/s00438-014-0932-3 NA NA t3827.T001936 4 Root dry weight/total plant dry weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13840227 NA 0 0 TAA170 0 0 4.390000000000001 6.636265 10.1007/s00438-014-0932-3 NA NA t3827.T001937 4 Root dry weight/total plant dry weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13840227 NA 0 0 NCPGR21 0 0 5.365000000000009 8.964169 10.1007/s00438-014-0932-3 NA NA t3827.T001938 4 Root dry weight/total plant dry weight ratio ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13393647 NA CaLG04 153360 0 bin_4_13547009 0 0 0.22 10.57 10.1038/srep15296 NA NA t3827.T001939 4 Root length density ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA 0 0 bin_4_13378761 0 0 5.2266 10.1038/srep15296 NA NA t3827.T001940 4 Root length density ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA CaLG04 139220 0 bin_4_13378761 0 0 0.23 5.23 10.1038/srep15296 NA NA t3827.T001941 4 Root length density Interval mapping ICC 4958 × ICC 1882 RIL ICCM0065 NA 0 0 Ca4_11276225 0 0 3.233000000000004 4.588491 10.1007/s00438-014-0932-3 NA NA t3827.T001942 4 Root length density Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13687456 NA 0 0 NCPGR21 0 0 5.13900000000001 7.092291 10.1007/s00438-014-0932-3 NA NA t3827.T001943 4 Root length density Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13840227 NA 0 0 NCPGR21 0 0 5.365000000000009 6.201954 10.1007/s00438-014-0932-3 NA NA t3827.T001944 4 Root surface area ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_16021376 NA 0 0 bin_8_16020537 0 0 3.7048 10.1038/srep15296 NA NA t3827.T001945 4 Root surface area Interval mapping ICC 4958 × ICC 1882 RIL NCPGR4 NA 0 0 Ca6_4994876 0 0 7.566999999999993 5.024973 10.1007/s00438-014-0932-3 NA NA t3827.T001946 4 Root Volume ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_16021376 NA 0 0 bin_8_16020537 0 0 3.5692 10.1038/srep15296 NA NA t3827.T001947 QTL_on_Chr4 4 SDW (Shoot dry weight) inclusive composite interval map RIL recombinant inbred line NA 4 13393647 0 4 13547009 0 46 4 10.1186/s12870-018-1245-1 NA NA t3827.T001948 QTL_on_Chr4 4 SDW (Shoot dry weight) inclusive composite interval map RIL recombinant inbred line NA 4 13393647 0 4 13547009 0 46 9 10.1186/s12870-018-1245-1 NA NA t3827.T001949 QTL_on_Chr5 4 SDW (Shoot dry weight) inclusive composite interval map RIL recombinant inbred line NA 5 24533589 0 5 20895327 0 13 3 10.1186/s12870-018-1245-1 NA NA t3827.T001950 QTL_on_Chr5 4 SDW (Shoot dry weight) inclusive composite interval map RIL recombinant inbred line NA 5 42970924 0 5 43185799 0 57 2 10.1186/s12870-018-1245-1 NA NA t3827.T001951 QTL_on_LG4 4 SDW (Shoot dry weight) composite interval mapping RIL recombinant inbred line ICCM0249 NA 0 0 NCPGR127 0 0 55.51 3 10.1186/s12870-018-1245-1 NA NA t3827.T001952 QTL_on_LG4 4 SDW (Shoot dry weight) composite interval mapping RIL recombinant inbred line ICCM0249 NA 0 0 NCPGR127 0 0 55.51 5 10.1186/s12870-018-1245-1 NA NA t3827.T001953 QTL_on_LG4 4 SDW (Shoot dry weight) composite interval mapping RIL recombinant inbred line H1A19 NA 0 0 Ca4_15925936 0 0 58.51 5 10.1186/s12870-018-1245-1 NA NA t3827.T001954 QTL_on_LG4 4 SDW (Shoot dry weight) composite interval mapping RIL recombinant inbred line Ca4_16278671 NA 0 0 Ca4_15934607 0 0 60.31 6 10.1186/s12870-018-1245-1 NA NA t3827.T001955 QTL_on_LG4 4 SDW (Shoot dry weight) composite interval mapping RIL recombinant inbred line Ca4_16046928 NA 0 0 ICCM0249 0 0 62.31 6 10.1186/s12870-018-1245-1 NA NA t3827.T001956 QTL_on_LG4 4 SDW (Shoot dry weight) composite interval mapping RIL recombinant inbred line NCPGR127 NA 0 0 TAA170 0 0 67.61 10 10.1186/s12870-018-1245-1 NA NA t3827.T001957 QTL_on_LG4 4 SDW (Shoot dry weight) composite interval mapping RIL recombinant inbred line NCPGR127 NA 0 0 TAA170 0 0 67.61 6 10.1186/s12870-018-1245-1 NA NA t3827.T001958 QTL_on_LG4 4 SDW (Shoot dry weight) composite interval mapping RIL recombinant inbred line ICCM0065 NA 0 0 Ca4_12558541 0 0 67.71 6 10.1186/s12870-018-1245-1 NA NA t3827.T001959 QTL_on_LG4 4 SDW (Shoot dry weight) composite interval mapping RIL recombinant inbred line Ca4_13840251 NA 0 0 Ca4_11276225 0 0 68.81 9 10.1186/s12870-018-1245-1 NA NA t3827.T001960 QTL_on_LG4 4 SDW (Shoot dry weight) composite interval mapping RIL recombinant inbred line TAA170 NA 0 0 NCPGR21 0 0 69.11 5 10.1186/s12870-018-1245-1 NA NA t3827.T001961 QTL_on_LG4 4 SDW (Shoot dry weight) composite interval mapping RIL recombinant inbred line Ca4_11441604 NA 0 0 Ca4_12982420 0 0 72.41 11 10.1186/s12870-018-1245-1 NA NA t3827.T001962 QTL_on_LG4 4 SDW (Shoot dry weight) composite interval mapping RIL recombinant inbred line Ca4_11441604 NA 0 0 Ca4_12982420 0 0 72.41 5 10.1186/s12870-018-1245-1 NA NA t3827.T001963 QTL_on_LG4 4 SDW (Shoot dry weight) composite interval mapping RIL recombinant inbred line NCPGR21 NA 0 0 TR11 0 0 74.11 4 10.1186/s12870-018-1245-1 NA NA t3827.T001964 QTL_on_LG4 4 SDW (Shoot dry weight) composite interval mapping RIL recombinant inbred line TR11 NA 0 0 GA24 0 0 78.01 3 10.1186/s12870-018-1245-1 NA NA t3827.T001965 QTL_on_LG4 4 SDW (Shoot dry weight) composite interval mapping RIL recombinant inbred line STMS11 NA 0 0 cpPb_680552 0 0 78.91 4 10.1186/s12870-018-1245-1 NA NA t3827.T001966 QTL_on_LG6 4 SDW (Shoot dry weight) composite interval mapping RIL recombinant inbred line Ca6_17129574 NA 0 0 Ca6_17096214 0 0 46.41 4 10.1186/s12870-018-1245-1 NA NA t3827.T001967 QTL_on_LG6 4 SDW (Shoot dry weight) composite interval mapping RIL recombinant inbred line Ca6_13340012 NA 0 0 Ca6_13625388 0 0 51.51 4 10.1186/s12870-018-1245-1 NA NA t3827.T001968 QTL_on_LG8 4 SDW (Shoot dry weight) composite interval mapping RIL recombinant inbred line Ca8_8270503 NA 0 0 CaM1918 0 0 35.31 3 10.1186/s12870-018-1245-1 NA NA t3827.T001969 4 Secondry branches ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_1_4992190 NA 0 0 bin_1_4870121 0 0 3.8464 10.1038/srep15296 NA NA t3827.T001970 4 Secondry branches ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13393647 NA 0 0 bin_4_13547009 0 0 4.1841 10.1038/srep15296 NA NA t3827.T001971 4 Secondry branches ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_3018346 NA 0 0 bin_8_3013230 0 0 3.378 10.1038/srep15296 NA NA t3827.T001972 4 Seed Colour Bi-parental analysis Segregants F2 M3292_Ca8_7597624 NA 0 0 0 0 285.261 7.77140456686093 10.1002/tpg2.20408 NA NA t3827.T001973 4 Seed Colour Bi-parental analysis Segregants F2 M120_Ca1_7359643 NA 0 0 0 0 383.152 4.30751248850903 10.1002/tpg2.20408 NA NA t3827.T001974 4 Seed Colour Bi-parental analysis Segregants F2 M38_Ca1_2297345 NA 0 0 0 0 394 4.39391800243028 10.1002/tpg2.20408 NA NA t3827.T001975 4 Seed Colour Bi-parental analysis Segregants F2 M354_Ca2_18728541 NA 0 0 0 0 150 10.8335263791066 10.1002/tpg2.20408 NA NA t3827.T001976 4 Seed Colour Bi-parental analysis Segregants F2 M676__0 NA 0 0 0 0 176 7.21346883826201 10.1002/tpg2.20408 NA NA t3827.T001977 4 Seed Colour Bi-parental analysis Segregants F2 M389_Ca2_18846383 NA 0 0 0 0 183 15.452478952603 10.1002/tpg2.20408 NA NA t3827.T001978 4 Seed Colour Bi-parental analysis Segregants F2 M372_Ca2_16293290 NA 0 0 0 0 214 9.793764618 10.1002/tpg2.20408 NA NA t3827.T001979 4 Seed Colour Bi-parental analysis Segregants F2 M336_Ca2_3113991 NA 0 0 0 0 294.947 14.6442619368434 10.1002/tpg2.20408 NA NA t3827.T001980 4 Seed Colour Bi-parental analysis Segregants F2 M465_Ca2_20187612 NA 0 0 0 0 308.924 10.8733536367847 10.1002/tpg2.20408 NA NA t3827.T001981 4 Seed Colour Bi-parental analysis Segregants F2 M365_Ca2_13458695 NA 0 0 0 0 361 8.09812400145171 10.1002/tpg2.20408 NA NA t3827.T001982 4 Seed Colour Bi-parental analysis Segregants F2 M268_Ca2_18728541 NA 0 0 0 0 398 10.8690652857997 10.1002/tpg2.20408 NA NA t3827.T001983 4 Seed Colour Bi-parental analysis Segregants F2 M381_Ca2_19263484 NA 0 0 0 0 447.604 5.96107786799304 10.1002/tpg2.20408 NA NA t3827.T001984 4 Seed Colour Bi-parental analysis Segregants F2 M414_Ca2_18034759 NA 0 0 0 0 497 13.0650938358578 10.1002/tpg2.20408 NA NA t3827.T001985 4 Seed Colour Bi-parental analysis Segregants F2 M2403_Scaffold0526_1299 NA 0 0 0 0 509 10.054745425582 10.1002/tpg2.20408 NA NA t3827.T001986 4 Seed Colour Bi-parental analysis Segregants F2 M502_Ca2_19314058 NA 0 0 0 0 614 6.30993337723979 10.1002/tpg2.20408 NA NA t3827.T001987 4 Seed Colour Bi-parental analysis Segregants F2 M438_Ca2_18509573 NA 0 0 0 0 639 4.54352235948616 10.1002/tpg2.20408 NA NA t3827.T001988 4 Seed Colour Bi-parental analysis Segregants F2 M3157_Ca8_2429066 NA 0 0 0 0 160 5.28653458077517 10.1002/tpg2.20408 NA NA t3827.T001989 4 Seed Colour Bi-parental analysis Segregants F2 M1052_Ca3_60028647 NA 0 0 0 0 1118 8.18605311068124 10.1002/tpg2.20408 NA NA t3827.T001990 4 Seed Colour Bi-parental analysis Segregants F2 M903_Ca3_61919153 NA 0 0 0 0 24 10.2500806372351 10.1002/tpg2.20408 NA NA t3827.T001991 4 Seed Colour Bi-parental analysis Segregants F2 M929_Ca3_47036765 NA 0 0 0 0 2635.657 9.59974536547389 10.1002/tpg2.20408 NA NA t3827.T001992 4 Seed Colour Bi-parental analysis Segregants F2 M381_Ca2_13451849 NA 0 0 0 0 295.169 8.20131089427017 10.1002/tpg2.20408 NA NA t3827.T001993 4 Seed Colour Bi-parental analysis Segregants F2 M669_Ca2_19403613 NA 0 0 0 0 282 16.5023241392786 10.1002/tpg2.20408 NA NA t3827.T001994 4 Seed Colour Bi-parental analysis Segregants F2 M817_Ca3_46328636 NA 0 0 0 0 337.307 4.27331968937448 10.1002/tpg2.20408 NA NA t3827.T001995 4 Seed Colour Bi-parental analysis Segregants F2 M728_Ca3_39579976 NA 0 0 0 0 374 7.09179377482227 10.1002/tpg2.20408 NA NA t3827.T001996 4 Seed Colour Bi-parental analysis Segregants F2 M760_Ca3_48398655 NA 0 0 0 0 462.251 4.848411737 10.1002/tpg2.20408 NA NA t3827.T001997 4 Seed Colour Bi-parental analysis Segregants F2 M725_Ca3_37444132 NA 0 0 0 0 481 5.53714946210707 10.1002/tpg2.20408 NA NA t3827.T001998 4 Seed Colour Bi-parental analysis Segregants F2 M2118_Ca6_1140882 NA 0 0 0 0 512 5.1466686550048 10.1002/tpg2.20408 NA NA t3827.T001999 4 Seed Colour Bi-parental analysis Segregants F2 M409_Ca2_18251168 NA 0 0 0 0 62 10.9177192609406 10.1002/tpg2.20408 NA NA t3827.T002000 4 Seed Colour Bi-parental analysis Segregants F2 M654_Ca3_6412604 NA 0 0 0 0 951.587 6.32248323566372 10.1002/tpg2.20408 NA NA t3827.T002001 4 Seed Colour Bi-parental analysis Segregants F2 M2325_Ca7_22797419 NA 0 0 0 0 1056 4.12680307643642 10.1002/tpg2.20408 NA NA t3827.T002002 4 Seed Colour Bi-parental analysis Segregants F2 M870_Ca2_15893597 NA 0 0 0 0 184 4.25726531313284 10.1002/tpg2.20408 NA NA t3827.T002003 4 Seed Colour Bi-parental analysis Segregants F2 M894_Ca3_62055129 NA 0 0 0 0 332.908 7.7722991229416 10.1002/tpg2.20408 NA NA t3827.T002004 4 Seed Colour Bi-parental analysis Segregants F2 M886_Ca4_4009061 NA 0 0 0 0 99.891 5.406802734 10.1002/tpg2.20408 NA NA t3827.T002005 4 Seed Colour Bi-parental analysis Segregants F2 M1743_Ca5_62001532 NA 0 0 0 0 1319.03 4.89247719510925 10.1002/tpg2.20408 NA NA t3827.T002006 4 Seed Colour Bi-parental analysis Segregants F2 M701_Ca2_21404308 NA 0 0 0 0 1362 8.45985953268042 10.1002/tpg2.20408 NA NA t3827.T002007 4 Seed Colour Bi-parental analysis Segregants F2 M1701_Ca5_28932786 NA 0 0 0 0 431.028 4.12680455941673 10.1002/tpg2.20408 NA NA t3827.T002008 4 Seed Colour Bi-parental analysis Segregants F2 M2503_Ca7_53003646 NA 0 0 0 0 0 5.294040652 10.1002/tpg2.20408 NA NA t3827.T002009 4 Seed Colour Bi-parental analysis Segregants F2 M2531_Ca6_44435171 NA 0 0 0 0 10 6.02529388631121 10.1002/tpg2.20408 NA NA t3827.T002010 4 Seed Colour Bi-parental analysis Segregants F2 M1726_Ca5_37077427 NA 0 0 0 0 1428.508 5.22215364895653 10.1002/tpg2.20408 NA NA t3827.T002011 4 Seed colour GWAS FarmCPU Segregants F2 NA 12366719 0 0 0 0 3.86388124661903 10.1002/tpg2.20408 NA NA t3827.T002012 4 Seed colour GWAS FarmCPU Segregants F2 NA 1487577 0 0 0 0 7.54391461952777 10.1002/tpg2.20408 NA NA t3827.T002013 4 Seed colour GWAS FarmCPU Segregants F2 NA 14931164 0 0 0 0 1.25698034388737 10.1002/tpg2.20408 NA NA t3827.T002014 4 Seed colour GWAS FarmCPU Segregants F2 NA 1549243 0 0 0 0 8.73688212793493 10.1002/tpg2.20408 NA NA t3827.T002015 4 Seed colour GWAS FarmCPU Segregants F2 NA 16476285 0 0 0 0 8.9543454310227e 10.1002/tpg2.20408 NA NA t3827.T002016 4 Seed colour GWAS FarmCPU Segregants F2 NA 17133455 0 0 0 0 2.0730442161009e 10.1002/tpg2.20408 NA NA t3827.T002017 4 Seed colour GWAS FarmCPU Segregants F2 NA 19186863 0 0 0 0 1.12635509694925 10.1002/tpg2.20408 NA NA t3827.T002018 4 Seed colour GWAS FarmCPU Segregants F2 NA 20120219 0 0 0 0 1.27643303135903 10.1002/tpg2.20408 NA NA t3827.T002019 4 Seed colour GWAS FarmCPU Segregants F2 NA 20163728 0 0 0 0 8.28178126242486 10.1002/tpg2.20408 NA NA t3827.T002020 4 Seed colour GWAS FarmCPU Segregants F2 NA 2097025 0 0 0 0 4.34683695149242 10.1002/tpg2.20408 NA NA t3827.T002021 4 Seed colour GWAS FarmCPU Segregants F2 NA 21029517 0 0 0 0 2.37639928866671 10.1002/tpg2.20408 NA NA t3827.T002022 4 Seed colour GWAS FarmCPU Segregants F2 NA 21384902 0 0 0 0 1.09944428948496 10.1002/tpg2.20408 NA NA t3827.T002023 4 Seed colour GWAS FarmCPU Segregants F2 NA 21766970 0 0 0 0 9.79109743173316 10.1002/tpg2.20408 NA NA t3827.T002024 4 Seed colour GWAS FarmCPU Segregants F2 NA 22728183 0 0 0 0 1.5452672261734e 10.1002/tpg2.20408 NA NA t3827.T002025 4 Seed colour GWAS FarmCPU Segregants F2 NA 29138216 0 0 0 0 5.36530442256718 10.1002/tpg2.20408 NA NA t3827.T002026 4 Seed colour GWAS FarmCPU Segregants F2 NA 29681988 0 0 0 0 1.46822710119615 10.1002/tpg2.20408 NA NA t3827.T002027 4 Seed colour GWAS FarmCPU Segregants F2 NA 33591845 0 0 0 0 3.61831253300636 10.1002/tpg2.20408 NA NA t3827.T002028 4 Seed colour GWAS FarmCPU Segregants F2 NA 38767946 0 0 0 0 2.83861699568317 10.1002/tpg2.20408 NA NA t3827.T002029 4 Seed colour GWAS FarmCPU Segregants F2 NA 42515617 0 0 0 0 2.3421389083581e 10.1002/tpg2.20408 NA NA t3827.T002030 4 Seed colour GWAS FarmCPU Segregants F2 NA 46065887 0 0 0 0 2.32202758391436 10.1002/tpg2.20408 NA NA t3827.T002031 4 Seed colour GWAS FarmCPU Segregants F2 NA 46329004 0 0 0 0 9.59203004165931 10.1002/tpg2.20408 NA NA t3827.T002032 4 Seed colour GWAS FarmCPU Segregants F2 NA 51987006 0 0 0 0 1.03626823096033 10.1002/tpg2.20408 NA NA t3827.T002033 4 Seed colour GWAS FarmCPU Segregants F2 NA 53003646 0 0 0 0 2.0345793364024e 10.1002/tpg2.20408 NA NA t3827.T002034 4 Seed colour GWAS FarmCPU Segregants F2 NA 61817418 0 0 0 0 1.54010040852568 10.1002/tpg2.20408 NA NA t3827.T002035 4 Seed colour GWAS FarmCPU Segregants F2 NA 62552129 0 0 0 0 1.14251544595255 10.1002/tpg2.20408 NA NA t3827.T002036 4 Seed colour GWAS FarmCPU Segregants F2 NA 63069761 0 0 0 0 4.32147023427212 10.1002/tpg2.20408 NA NA t3827.T002037 4 Seed colour GWAS FarmCPU Segregants F2 NA 9906957 0 0 0 0 4.15789083471989 10.1002/tpg2.20408 NA NA t3827.T002038 4 Seed Size Bi-parental analysis Segregants F2 M876_Ca3_57962918 NA 0 0 0 0 366 4.61907899491063 10.1002/tpg2.20408 NA NA t3827.T002039 4 Seed Texture Bi-parental analysis Segregants F2 M51_Ca1_5472963 NA 0 0 0 0 145.885 7.64929803019407 10.1002/tpg2.20408 NA NA t3827.T002040 4 Seed Texture Bi-parental analysis Segregants F2 M273_Ca1_23932104 NA 0 0 0 0 173.051 4.78031387013337 10.1002/tpg2.20408 NA NA t3827.T002041 4 Seed Texture Bi-parental analysis Segregants F2 M140_Ca1_8938457 NA 0 0 0 0 20 4.72657514185784 10.1002/tpg2.20408 NA NA t3827.T002042 4 Seed Texture Bi-parental analysis Segregants F2 M3308_Ca8_8850458 NA 0 0 0 0 321 19.0312108026043 10.1002/tpg2.20408 NA NA t3827.T002043 4 Seed Texture Bi-parental analysis Segregants F2 M2943__0 NA 0 0 0 0 366 5.74114638625575 10.1002/tpg2.20408 NA NA t3827.T002044 4 Seed Texture Bi-parental analysis Segregants F2 M77_Ca1_48213258 NA 0 0 0 0 418 4.94603458035046 10.1002/tpg2.20408 NA NA t3827.T002045 4 Seed Texture Bi-parental analysis Segregants F2 M235_Ca1_14783181 NA 0 0 0 0 724.512 4.39404007799884 10.1002/tpg2.20408 NA NA t3827.T002046 4 Seed Texture Bi-parental analysis Segregants F2 M278_Ca1_36439892 NA 0 0 0 0 775.706 6.5309620090405 10.1002/tpg2.20408 NA NA t3827.T002047 4 Seed Texture Bi-parental analysis Segregants F2 M71_Ca1_1627364 NA 0 0 0 0 218 4.3177230785811 10.1002/tpg2.20408 NA NA t3827.T002048 4 Seed Texture Bi-parental analysis Segregants F2 M305_Ca2_10778849 NA 0 0 0 0 367 5.19132453603723 10.1002/tpg2.20408 NA NA t3827.T002049 4 Seed Texture Bi-parental analysis Segregants F2 M1929_Ca5_27894683 NA 0 0 0 0 433 10.1114556535742 10.1002/tpg2.20408 NA NA t3827.T002050 4 Seed Texture Bi-parental analysis Segregants F2 M396_Ca2_11851396 NA 0 0 0 0 448 4.62300739468358 10.1002/tpg2.20408 NA NA t3827.T002051 4 Seed Texture Bi-parental analysis Segregants F2 M2215_Ca4_5014489 NA 0 0 0 0 87.259 7.73830515690412 10.1002/tpg2.20408 NA NA t3827.T002052 4 Seed Texture Bi-parental analysis Segregants F2 M707__0 NA 0 0 0 0 329 5.32157996488795 10.1002/tpg2.20408 NA NA t3827.T002053 4 Seed Texture Bi-parental analysis Segregants F2 M3015__0 NA 0 0 0 0 0 4.7088581726436 10.1002/tpg2.20408 NA NA t3827.T002054 4 Seed Texture Bi-parental analysis Segregants F2 M3050__0 NA 0 0 0 0 0 4.72108447090209 10.1002/tpg2.20408 NA NA t3827.T002055 4 Seed Texture Bi-parental analysis Segregants F2 M713_Ca3_38955187 NA 0 0 0 0 146 10.2485356901282 10.1002/tpg2.20408 NA NA t3827.T002056 4 Seed Texture Bi-parental analysis Segregants F2 M2713__0 NA 0 0 0 0 162.712 4.9991765360425 10.1002/tpg2.20408 NA NA t3827.T002057 4 Seed Texture Bi-parental analysis Segregants F2 M1123_Ca4_3414941 NA 0 0 0 0 175 4.95863209609047 10.1002/tpg2.20408 NA NA t3827.T002058 4 Seed Texture Bi-parental analysis Segregants F2 M888_Ca3_40680944 NA 0 0 0 0 2419 11.5860351111718 10.1002/tpg2.20408 NA NA t3827.T002059 4 Seed Texture Bi-parental analysis Segregants F2 M665_Ca3_35826682 NA 0 0 0 0 270 5.42466725717144 10.1002/tpg2.20408 NA NA t3827.T002060 4 Seed Texture Bi-parental analysis Segregants F2 M746_Ca3_39655375 NA 0 0 0 0 308.572 4.57153075416748 10.1002/tpg2.20408 NA NA t3827.T002061 4 Seed Texture Bi-parental analysis Segregants F2 M922_Ca3_46089512 NA 0 0 0 0 315 8.57761131556826 10.1002/tpg2.20408 NA NA t3827.T002062 4 Seed Texture Bi-parental analysis Segregants F2 M155_Ca3_38496360 NA 0 0 0 0 420 9.58581189217608 10.1002/tpg2.20408 NA NA t3827.T002063 4 Seed Texture Bi-parental analysis Segregants F2 M714_Ca3_39396089 NA 0 0 0 0 484.313 10.7057009409504 10.1002/tpg2.20408 NA NA t3827.T002064 4 Seed Texture Bi-parental analysis Segregants F2 M721_Ca3_37424836 NA 0 0 0 0 485 11.5030309084053 10.1002/tpg2.20408 NA NA t3827.T002065 4 Seed Texture Bi-parental analysis Segregants F2 M2555_Ca7_50895513 NA 0 0 0 0 843.853 6.51114926261942 10.1002/tpg2.20408 NA NA t3827.T002066 4 Seed Texture Bi-parental analysis Segregants F2 M689_Ca3_39239925 NA 0 0 0 0 34 7.16670364606879 10.1002/tpg2.20408 NA NA t3827.T002067 4 Seed Texture Bi-parental analysis Segregants F2 M693_Ca3_40576713 NA 0 0 0 0 350 17.76400673 10.1002/tpg2.20408 NA NA t3827.T002068 4 Seed Texture Bi-parental analysis Segregants F2 M2599__0 NA 0 0 0 0 360.146 6.56735819377199 10.1002/tpg2.20408 NA NA t3827.T002069 4 Seed Texture Bi-parental analysis Segregants F2 M843_Ca3_62874359 NA 0 0 0 0 37 6.06076476795441 10.1002/tpg2.20408 NA NA t3827.T002070 4 Seed Texture Bi-parental analysis Segregants F2 M658_Ca3_32420199 NA 0 0 0 0 370 7.6953304246667 10.1002/tpg2.20408 NA NA t3827.T002071 4 Seed Texture Bi-parental analysis Segregants F2 M867_Ca4_5014489 NA 0 0 0 0 496.357 10.6490139199627 10.1002/tpg2.20408 NA NA t3827.T002072 4 Seed Texture Bi-parental analysis Segregants F2 M706_Ca3_37872607 NA 0 0 0 0 523.195 15.3387904055181 10.1002/tpg2.20408 NA NA t3827.T002073 4 Seed Texture Bi-parental analysis Segregants F2 M688_Ca3_39341787 NA 0 0 0 0 585.051 4.39660178865307 10.1002/tpg2.20408 NA NA t3827.T002074 4 Seed Texture Bi-parental analysis Segregants F2 M779_Ca3_39796474 NA 0 0 0 0 630.009 7.90157448836432 10.1002/tpg2.20408 NA NA t3827.T002075 4 Seed Texture Bi-parental analysis Segregants F2 M2220_Ca7_1193858 NA 0 0 0 0 669 5.23344137931125 10.1002/tpg2.20408 NA NA t3827.T002076 4 Seed Texture Bi-parental analysis Segregants F2 M577_Ca3_29224983 NA 0 0 0 0 680 5.35238711355041 10.1002/tpg2.20408 NA NA t3827.T002077 4 Seed Texture Bi-parental analysis Segregants F2 M3608_Ca6_63189184 NA 0 0 0 0 1041.085 4.16301197262298 10.1002/tpg2.20408 NA NA t3827.T002078 4 Seed Texture Bi-parental analysis Segregants F2 M917_Ca4_421838 NA 0 0 0 0 105 6.68607569194819 10.1002/tpg2.20408 NA NA t3827.T002079 4 Seed Texture Bi-parental analysis Segregants F2 M1259_Ca4_10911079 NA 0 0 0 0 1303.925 6.17192322253755 10.1002/tpg2.20408 NA NA t3827.T002080 4 Seed Texture Bi-parental analysis Segregants F2 M1119_Ca4_5028158 NA 0 0 0 0 180 8.523812725757 10.1002/tpg2.20408 NA NA t3827.T002081 4 Seed Texture Bi-parental analysis Segregants F2 M726_Ca3_46328636 NA 0 0 0 0 305 4.75925715943899 10.1002/tpg2.20408 NA NA t3827.T002082 4 Seed Texture Bi-parental analysis Segregants F2 M2585_Ca7_55722368 NA 0 0 0 0 313.921 4.39494861180963 10.1002/tpg2.20408 NA NA t3827.T002083 4 Seed Texture Bi-parental analysis Segregants F2 M2621_Ca6_64684310 NA 0 0 0 0 0 5.25289870315935 10.1002/tpg2.20408 NA NA t3827.T002084 4 Seed Texture Bi-parental analysis Segregants F2 M985_Ca4_5169699 NA 0 0 0 0 1000 8.48433135231011 10.1002/tpg2.20408 NA NA t3827.T002085 4 Seed Texture Bi-parental analysis Segregants F2 M989_Ca4_5871309 NA 0 0 0 0 1172 4.80249419130133 10.1002/tpg2.20408 NA NA t3827.T002086 4 Seed Texture Bi-parental analysis Segregants F2 M707_Ca3_39692111 NA 0 0 0 0 139 9.62581594683417 10.1002/tpg2.20408 NA NA t3827.T002087 4 Seed Texture Bi-parental analysis Segregants F2 NA 0 0 0 0 144 4.56023708944384 10.1002/tpg2.20408 NA NA t3827.T002088 4 Seed Texture Bi-parental analysis Segregants F2 M974_Ca4_1413091 NA 0 0 0 0 1672 5.62431583691937 10.1002/tpg2.20408 NA NA t3827.T002089 4 Seed Texture Bi-parental analysis Segregants F2 M873_Ca4_3167095 NA 0 0 0 0 65.66 5.936360075 10.1002/tpg2.20408 NA NA t3827.T002090 4 Seed Texture Bi-parental analysis Segregants F2 M947_Ca4_3840524 NA 0 0 0 0 1099.535 4.20616579833792 10.1002/tpg2.20408 NA NA t3827.T002091 4 Seed Texture Bi-parental analysis Segregants F2 M927_Ca4_2986636 NA 0 0 0 0 114.388 13.9522392879573 10.1002/tpg2.20408 NA NA t3827.T002092 4 Seed Texture Bi-parental analysis Segregants F2 M882_Ca4_2452120 NA 0 0 0 0 119 12.5595297564465 10.1002/tpg2.20408 NA NA t3827.T002093 4 Seed Texture Bi-parental analysis Segregants F2 M3084__0 NA 0 0 0 0 263.541 5.3848092509762 10.1002/tpg2.20408 NA NA t3827.T002094 4 Seed Texture Bi-parental analysis Segregants F2 M1152_Ca3_39655375 NA 0 0 0 0 447 12.738743676415 10.1002/tpg2.20408 NA NA t3827.T002095 4 Seed Texture Bi-parental analysis Segregants F2 M918_Ca4_3041773 NA 0 0 0 0 498 5.5516122540922 10.1002/tpg2.20408 NA NA t3827.T002096 4 Seed Texture Bi-parental analysis Segregants F2 M2782_Ca8_9396515 NA 0 0 0 0 49 4.84949695502346 10.1002/tpg2.20408 NA NA t3827.T002097 4 Seed Texture Bi-parental analysis Segregants F2 M935_Ca4_2452094 NA 0 0 0 0 437.609 5.40208211107489 10.1002/tpg2.20408 NA NA t3827.T002098 4 Seed texture GWAS FarmCPU Segregants F2 NA 10858017 0 0 0 0 4.29e-06 10.1002/tpg2.20408 NA NA t3827.T002099 4 Seed texture GWAS FarmCPU Segregants F2 NA 1108025 0 0 0 0 1.36e-05 10.1002/tpg2.20408 NA NA t3827.T002100 4 Seed texture GWAS FarmCPU Segregants F2 NA 1210724 0 0 0 0 3.97e-07 10.1002/tpg2.20408 NA NA t3827.T002101 4 Seed texture GWAS FarmCPU Segregants F2 NA 1271872 0 0 0 0 1.94e-06 10.1002/tpg2.20408 NA NA t3827.T002102 4 Seed texture GWAS FarmCPU Segregants F2 NA 1389379 0 0 0 0 4.04e-11 10.1002/tpg2.20408 NA NA t3827.T002103 4 Seed texture GWAS FarmCPU Segregants F2 NA 13973833 0 0 0 0 4.88588093485087 10.1002/tpg2.20408 NA NA t3827.T002104 4 Seed texture GWAS FarmCPU Segregants F2 NA 1434835 0 0 0 0 2.64811127176792 10.1002/tpg2.20408 NA NA t3827.T002105 4 Seed texture GWAS FarmCPU Segregants F2 NA 17515016 0 0 0 0 8.04e-09 10.1002/tpg2.20408 NA NA t3827.T002106 4 Seed texture GWAS FarmCPU Segregants F2 NA 17985891 0 0 0 0 8.40337636848238 10.1002/tpg2.20408 NA NA t3827.T002107 4 Seed texture GWAS FarmCPU Segregants F2 NA 18155048 0 0 0 0 1.23741451607587 10.1002/tpg2.20408 NA NA t3827.T002108 4 Seed texture GWAS FarmCPU Segregants F2 NA 18830564 0 0 0 0 3.68e-10 10.1002/tpg2.20408 NA NA t3827.T002109 4 Seed texture GWAS FarmCPU Segregants F2 NA 19858902 0 0 0 0 2.68125655258969 10.1002/tpg2.20408 NA NA t3827.T002110 4 Seed texture GWAS FarmCPU Segregants F2 NA 202844 0 0 0 0 2.96e-06 10.1002/tpg2.20408 NA NA t3827.T002111 4 Seed texture GWAS FarmCPU Segregants F2 NA 2425695 0 0 0 0 5.7e-07 10.1002/tpg2.20408 NA NA t3827.T002112 4 Seed texture GWAS FarmCPU Segregants F2 NA 2639657 0 0 0 0 3.54334226710469 10.1002/tpg2.20408 NA NA t3827.T002113 4 Seed texture GWAS FarmCPU Segregants F2 NA 27472639 0 0 0 0 4.81e-06 10.1002/tpg2.20408 NA NA t3827.T002114 4 Seed texture GWAS FarmCPU Segregants F2 NA 29760004 0 0 0 0 6.99e-09 10.1002/tpg2.20408 NA NA t3827.T002115 4 Seed texture GWAS FarmCPU Segregants F2 NA 30628460 0 0 0 0 2.69212765569789 10.1002/tpg2.20408 NA NA t3827.T002116 4 Seed texture GWAS FarmCPU Segregants F2 NA 32004543 0 0 0 0 1.78036835037706 10.1002/tpg2.20408 NA NA t3827.T002117 4 Seed texture GWAS FarmCPU Segregants F2 NA 32713743 0 0 0 0 9.8737389738289e 10.1002/tpg2.20408 NA NA t3827.T002118 4 Seed texture GWAS FarmCPU Segregants F2 NA 3331044 0 0 0 0 1.73e-05 10.1002/tpg2.20408 NA NA t3827.T002119 4 Seed texture GWAS FarmCPU Segregants F2 NA 3346249 0 0 0 0 2.86e-10 10.1002/tpg2.20408 NA NA t3827.T002120 4 Seed texture GWAS FarmCPU Segregants F2 NA 36288539 0 0 0 0 8.75e-07 10.1002/tpg2.20408 NA NA t3827.T002121 4 Seed texture GWAS FarmCPU Segregants F2 NA 38517031 0 0 0 0 2.33e-08 10.1002/tpg2.20408 NA NA t3827.T002122 4 Seed texture GWAS FarmCPU Segregants F2 NA 38955187 0 0 0 0 2.82e-07 10.1002/tpg2.20408 NA NA t3827.T002123 4 Seed texture GWAS FarmCPU Segregants F2 NA 393773 0 0 0 0 2.45e-07 10.1002/tpg2.20408 NA NA t3827.T002124 4 Seed texture GWAS FarmCPU Segregants F2 NA 40025689 0 0 0 0 1.36e-09 10.1002/tpg2.20408 NA NA t3827.T002125 4 Seed texture GWAS FarmCPU Segregants F2 NA 40554668 0 0 0 0 1.22e-05 10.1002/tpg2.20408 NA NA t3827.T002126 4 Seed texture GWAS FarmCPU Segregants F2 NA 4209059 0 0 0 0 4.15e-09 10.1002/tpg2.20408 NA NA t3827.T002127 4 Seed texture GWAS FarmCPU Segregants F2 NA 46118449 0 0 0 0 9.73e-07 10.1002/tpg2.20408 NA NA t3827.T002128 4 Seed texture GWAS FarmCPU Segregants F2 NA 47490613 0 0 0 0 2.96e-06 10.1002/tpg2.20408 NA NA t3827.T002129 4 Seed texture GWAS FarmCPU Segregants F2 NA 4960574 0 0 0 0 7.15934750759719 10.1002/tpg2.20408 NA NA t3827.T002130 4 Seed texture GWAS FarmCPU Segregants F2 NA 53660718 0 0 0 0 1.02e-09 10.1002/tpg2.20408 NA NA t3827.T002131 4 Seed texture GWAS FarmCPU Segregants F2 NA 53914600 0 0 0 0 7.82202380758638 10.1002/tpg2.20408 NA NA t3827.T002132 4 Seed texture GWAS FarmCPU Segregants F2 NA 55528972 0 0 0 0 8.91e-06 10.1002/tpg2.20408 NA NA t3827.T002133 4 Seed texture GWAS FarmCPU Segregants F2 NA 5561205 0 0 0 0 4.86899310185541 10.1002/tpg2.20408 NA NA t3827.T002134 4 Seed texture GWAS FarmCPU Segregants F2 NA 60093454 0 0 0 0 7.08e-16 10.1002/tpg2.20408 NA NA t3827.T002135 4 Seed texture GWAS FarmCPU Segregants F2 NA 62186087 0 0 0 0 5.73e-06 10.1002/tpg2.20408 NA NA t3827.T002136 4 Seed texture GWAS FarmCPU Segregants F2 NA 62806661 0 0 0 0 1.74e-05 10.1002/tpg2.20408 NA NA t3827.T002137 4 Seed texture GWAS FarmCPU Segregants F2 NA 9278024 0 0 0 0 8.71e-12 10.1002/tpg2.20408 NA NA t3827.T002138 4 Seed texture GWAS FarmCPU Segregants F2 NA 9503231 0 0 0 0 5.23017634200868 10.1002/tpg2.20408 NA NA t3827.T002139 4 Seed Weight avg Bi-parental analysis Segregants F2 M1460_Ca5_15006186 NA 0 0 0 0 255 4.2480490154089 10.1002/tpg2.20408 NA NA t3827.T002140 4 Seed Weight avg Bi-parental analysis Segregants F2 M653_Ca3_35569310 NA 0 0 0 0 212 10.0160461759174 10.1002/tpg2.20408 NA NA t3827.T002141 4 Seed yield Interval mapping Pusa 1103 × ILWC 46 F5 CaPOPI_852 NA 0 0 CaPOPI_1063 0 0 75.5 - 82.8 8 10.3389/fpls.2016.01362 NA NA t3827.T002142 4 Seed yield Interval mapping Pusa 1103 × ILWC 46 F5 CaPOPI_2621 NA 0 0 CaPOPI_2791 0 0 106.11 - 116.58 11.8 10.3389/fpls.2016.01362 NA NA t3827.T002143 4 Seed yield Interval mapping Pusa 1103 × ILWC 46 F5 CaPOPI_3978 NA 0 0 CaPOPI_4047 0 0 24.42 - 34.05 12.3 10.3389/fpls.2016.01362 NA NA t3827.T002144 4 Seed yield Interval mapping Pusa 1103 × ILWC 46 and Pusa 256 × ILWC 46 F5 CaPOPI_II_203 NA 0 0 CaPOPI_II_227 0 0 75.5 - 81.95 10.2 10.3389/fpls.2016.01362 NA NA t3827.T002145 4 Seed yield Interval mapping Pusa 1103 × ILWC 46 and Pusa 256 × ILWC 46 F5 CaPOPI_II_468 NA 0 0 CaPOPI_II_482 0 0 76.64 - 80.89 14.5 10.3389/fpls.2016.01362 NA NA t3827.T002146 4 Seed yield Interval mapping Pusa 1103 × ILWC 46 and Pusa 256 × ILWC 46 F5 CaPOPI_II_674 NA 0 0 CaPOPI_II_683 0 0 20.2 - 26 12.4 10.3389/fpls.2016.01362 NA NA t3827.T002147 4 Seed yield Interval mapping Pusa 256 × ILWC 46 F5 CaPOPII_662 NA 0 0 CaPOPII_781 0 0 48.55 - 54.1 7.5 10.3389/fpls.2016.01362 NA NA t3827.T002148 4 Seed yield Interval mapping Pusa 256 × ILWC 46 F5 CaPOPII_1680 NA 0 0 CaPOPII_1743 0 0 78.06 - 85.77 10.6 10.3389/fpls.2016.01362 NA NA t3827.T002149 4 Seed yield Interval mapping Pusa 256 × ILWC 46 F5 CaPOPII_2424 NA 0 0 CaPOPII_2465 0 0 14.81 - 21.08 9.5 10.3389/fpls.2016.01362 NA NA t3827.T002150 salsBqtl.1 4 Seedling biomass whole genome average interval ma Rupali/Genesis836 population recombinant inbred line SNP14_C14_12_74(C) NA CaLG04 0 0 SNP15_C14_13_06 0 0 71.61 - 72.17 23.6345 10.3389/fpls.2021.667910 NA NA t3827.T002151 salsBqtl.2 4 Seedling biomass whole genome average interval ma Rupali/Genesis836 population recombinant inbred line SNP27 NA CaLG01 0 0 SNP23 0 0 39.67 - 50.16 7.7398 10.3389/fpls.2021.667910 NA NA t3827.T002152 4 Seeds/pod ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_5_20457969 NA 0 0 bin_5_7323627 0 0 3.1689 10.1038/srep15296 NA NA t3827.T002153 4 Seeds/pod ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_8_8297568 NA 0 0 bin_8_8296790 0 0 3.0017 10.1038/srep15296 NA NA t3827.T002154 4 Shoot dry weight ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13393647 NA 0 0 bin_4_13547009 0 0 13.7824 10.1038/srep15296 NA NA t3827.T002155 4 Shoot dry weight ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13393647 NA CaLG04 153360 0 bin_4_13547009 0 0 0.22 13.78 10.1038/srep15296 NA NA t3827.T002156 4 Shoot dry weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_15651804 NA 0 0 TR8 0 0 0.7289999999999992 10.013029 10.1007/s00438-014-0932-3 NA NA t3827.T002157 4 Shoot dry weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12558541 NA 0 0 Ca4_11276225 0 0 1.8120000000000118 16.469055 10.1007/s00438-014-0932-3 NA NA t3827.T002158 4 Shoot dry weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12558541 NA 0 0 Ca4_11276225 0 0 1.8120000000000118 6.399566 10.1007/s00438-014-0932-3 NA NA t3827.T002159 4 Shoot dry weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_16149998 NA 0 0 ICCM0249 0 0 3.1539999999999964 10.078176 10.1007/s00438-014-0932-3 NA NA t3827.T002160 4 Shoot dry weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_13840227 NA 0 0 TAA170 0 0 4.390000000000001 16.857763 10.1007/s00438-014-0932-3 NA NA t3827.T002161 4 Shoot dry weight Interval mapping ICC 4958 × ICC 1882 RIL Ca4_12982420 NA 0 0 NCPGR21 0 0 5.909999999999997 7.39848 10.1007/s00438-014-0932-3 NA NA t3827.T002162 QTL_on_Chr3 4 SLA (Specific leaf area) inclusive composite interval map RIL recombinant inbred line NA 3 33718067 0 3 33467733 0 80 3 10.1186/s12870-018-1245-1 NA NA t3827.T002163 QTL_on_Chr4 4 SLA (Specific leaf area) inclusive composite interval map RIL recombinant inbred line NA 4 12586721 0 4 12650792 0 42 3 10.1186/s12870-018-1245-1 NA NA t3827.T002164 QTL_on_Chr4 4 SLA (Specific leaf area) inclusive composite interval map RIL recombinant inbred line NA 4 12586721 0 4 12650792 0 42 4 10.1186/s12870-018-1245-1 NA NA t3827.T002165 QTL_on_Chr4 4 SLA (Specific leaf area) inclusive composite interval map RIL recombinant inbred line NA 4 16602407 0 4 16662055 0 57 2 10.1186/s12870-018-1245-1 NA NA t3827.T002166 QTL_on_LG4 4 SLA (Specific leaf area) composite interval mapping RIL recombinant inbred line ICCM0249 NA 0 0 NCPGR127 0 0 54.51 4 10.1186/s12870-018-1245-1 NA NA t3827.T002167 QTL_on_LG4 4 SLA (Specific leaf area) composite interval mapping RIL recombinant inbred line NCPGR127 NA 0 0 TAA170 0 0 66.61 3 10.1186/s12870-018-1245-1 NA NA t3827.T002168 QTL_on_LG4 4 SLA (Specific leaf area) composite interval mapping RIL recombinant inbred line TAA170 NA 0 0 NCPGR21 0 0 68.11 3 10.1186/s12870-018-1245-1 NA NA t3827.T002169 QTL_on_LG4 4 SLA (Specific leaf area) composite interval mapping RIL recombinant inbred line Ca4_11441604 NA 0 0 Ca4_12982420 0 0 72.41 4 10.1186/s12870-018-1245-1 NA NA t3827.T002170 QTL_on_LG4 4 SLA (Specific leaf area) composite interval mapping RIL recombinant inbred line Ca4_13687456 NA 0 0 TAA170 0 0 77.21 3 10.1186/s12870-018-1245-1 NA NA t3827.T002171 QTL_on_LG4 4 SLA (Specific leaf area) composite interval mapping RIL recombinant inbred line Ca4_13687456 NA 0 0 TAA170 0 0 77.21 5 10.1186/s12870-018-1245-1 NA NA t3827.T002172 QTL_on_LG6 4 SLA (Specific leaf area) composite interval mapping RIL recombinant inbred line Ca6_13340012 NA 0 0 Ca6_13625388 0 0 51.51 3 10.1186/s12870-018-1245-1 NA NA t3827.T002173 QTL_on_LG6 4 SLA (Specific leaf area) composite interval mapping RIL recombinant inbred line Ca6_13340012 NA 0 0 Ca6_13625388 0 0 51.51 4 10.1186/s12870-018-1245-1 NA NA t3827.T002174 QTL_on_LG6 4 SLA (Specific leaf area) composite interval mapping RIL recombinant inbred line Ca6_10020177 NA 0 0 Ca6_10020187 0 0 59.61 2 10.1186/s12870-018-1245-1 NA NA t3827.T002175 QTL_on_LG6 4 SLA (Specific leaf area) composite interval mapping RIL recombinant inbred line NCPGR202 NA 0 0 CaM1760 0 0 76.41 3 10.1186/s12870-018-1245-1 NA NA t3827.T002176 QTL_on_LG7 4 SLA (Specific leaf area) composite interval mapping RIL recombinant inbred line ICCM197a NA 0 0 CaM1567 0 0 45.71 3 10.1186/s12870-018-1245-1 NA NA t3827.T002177 QTL_on_Chr5 4 SLW (Specific leaf weight) inclusive composite interval map RIL recombinant inbred line NA 5 31507607 0 5 31449929 0 113 2 10.1186/s12870-018-1245-1 NA NA t3827.T002178 QTL_on_LG3 4 SLW (Specific leaf weight) composite interval mapping RIL recombinant inbred line TR2 NA 0 0 NCPGR10 0 0 0.01 3 10.1186/s12870-018-1245-1 NA NA t3827.T002179 QTL_on_LG4 4 SLW (Specific leaf weight) composite interval mapping RIL recombinant inbred line ICCM0249 NA 0 0 ICCM0065 0 0 64.51 3 10.1186/s12870-018-1245-1 NA NA t3827.T002180 QTL_on_LG4 4 SLW (Specific leaf weight) composite interval mapping RIL recombinant inbred line TAA170 NA 0 0 NCPGR21 0 0 66.61 3 10.1186/s12870-018-1245-1 NA NA t3827.T002181 QTL_on_LG4 4 SLW (Specific leaf weight) composite interval mapping RIL recombinant inbred line NCPGR127 NA 0 0 TAA170 0 0 67.61 3 10.1186/s12870-018-1245-1 NA NA t3827.T002182 QTL_on_LG4 4 SLW (Specific leaf weight) composite interval mapping RIL recombinant inbred line TAA170 NA 0 0 NCPGR21 0 0 68.11 4 10.1186/s12870-018-1245-1 NA NA t3827.T002183 QTL_on_LG4 4 SLW (Specific leaf weight) composite interval mapping RIL recombinant inbred line Ca4_13687456 NA 0 0 TAA170 0 0 77.21 4 10.1186/s12870-018-1245-1 NA NA t3827.T002184 QTL_on_LG8 4 SLW (Specific leaf weight) composite interval mapping RIL recombinant inbred line CaM0812 NA 0 0 Ca8_4617623 0 0 54.41 3 10.1186/s12870-018-1245-1 NA NA t3827.T002185 conNaqtl.1 4 Sodium whole genome average interval ma Rupali/Genesis836 population recombinant inbred line SNP201 NA CaLG04 0 0 SNP2_Ca4_75 0 0 27.87 - 29.89 4.3069 10.3389/fpls.2021.667910 NA NA t3827.T002186 QTL_on_Chr4 4 T (Transpiration) inclusive composite interval map RIL recombinant inbred line NA 4 12321889 0 4 12331005 0 41 4 10.1186/s12870-018-1245-1 NA NA t3827.T002187 QTL_on_Chr4 4 T (Transpiration) inclusive composite interval map RIL recombinant inbred line NA 4 12321889 0 4 12331005 0 41 4 10.1186/s12870-018-1245-1 NA NA t3827.T002188 QTL_on_Chr5 4 T (Transpiration) inclusive composite interval map RIL recombinant inbred line NA 5 43185799 0 5 43439397 0 59 2 10.1186/s12870-018-1245-1 NA NA t3827.T002189 QTL_on_LG4 4 T (Transpiration) composite interval mapping RIL recombinant inbred line cpPb_322921 NA 0 0 TA132 0 0 44.51 3 10.1186/s12870-018-1245-1 NA NA t3827.T002190 QTL_on_LG4 4 T (Transpiration) composite interval mapping RIL recombinant inbred line ICCM0249 NA 0 0 NCPGR127 0 0 58.51 3 10.1186/s12870-018-1245-1 NA NA t3827.T002191 QTL_on_LG4 4 T (Transpiration) composite interval mapping RIL recombinant inbred line H1A19 NA 0 0 Ca4_15925936 0 0 58.51 4 10.1186/s12870-018-1245-1 NA NA t3827.T002192 QTL_on_LG4 4 T (Transpiration) composite interval mapping RIL recombinant inbred line Ca4_15934607 NA 0 0 Ca4_15926160 0 0 60.71 4 10.1186/s12870-018-1245-1 NA NA t3827.T002193 QTL_on_LG4 4 T (Transpiration) composite interval mapping RIL recombinant inbred line NCPGR127 NA 0 0 TAA170 0 0 65.61 5 10.1186/s12870-018-1245-1 NA NA t3827.T002194 QTL_on_LG4 4 T (Transpiration) composite interval mapping RIL recombinant inbred line ICCM0065 NA 0 0 Ca4_12558541 0 0 67.71 5 10.1186/s12870-018-1245-1 NA NA t3827.T002195 QTL_on_LG4 4 T (Transpiration) composite interval mapping RIL recombinant inbred line ICCM0065 NA 0 0 Ca4_12558541 0 0 67.71 5 10.1186/s12870-018-1245-1 NA NA t3827.T002196 QTL_on_LG5 4 T (Transpiration) composite interval mapping RIL recombinant inbred line cpPb_682328 NA 0 0 NCPGR189 0 0 0.01 5 10.1186/s12870-018-1245-1 NA NA t3827.T002197 QTL_on_LG5 4 T (Transpiration) composite interval mapping RIL recombinant inbred line cpPb_682328 NA 0 0 NCPGR189 0 0 0.01 6 10.1186/s12870-018-1245-1 NA NA t3827.T002198 QTL_on_LG5 4 T (Transpiration) composite interval mapping RIL recombinant inbred line cpPb682328 NA 0 0 H3A07 0 0 0.01 6 10.1186/s12870-018-1245-1 NA NA t3827.T002199 QTL_on_LG6 4 T (Transpiration) composite interval mapping RIL recombinant inbred line CaM1125 NA 0 0 H1F21 0 0 36.31 3 10.1186/s12870-018-1245-1 NA NA t3827.T002200 QTL_on_LG6 4 T (Transpiration) composite interval mapping RIL recombinant inbred line CaM1125 NA 0 0 NCPGR203 0 0 8.31 3 10.1186/s12870-018-1245-1 NA NA t3827.T002201 QTL_on_LG7 4 T (Transpiration) composite interval mapping RIL recombinant inbred line TA180 NA 0 0 ICCM197a 0 0 43.71 5 10.1186/s12870-018-1245-1 NA NA t3827.T002202 QTL_on_LG8 4 T (Transpiration) composite interval mapping RIL recombinant inbred line CaM2187 NA 0 0 CaM0539 0 0 1.01 3 10.1186/s12870-018-1245-1 NA NA t3827.T002203 QTL_on_LG8 4 T (Transpiration) composite interval mapping RIL recombinant inbred line NCPGR164 NA 0 0 CaM2187 0 0 8.01 5 10.1186/s12870-018-1245-1 NA NA t3827.T002204 QTL_on_LG8 4 T (Transpiration) composite interval mapping RIL recombinant inbred line CaM2187 NA 0 0 CaM1918 0 0 9.97 5 10.1186/s12870-018-1245-1 NA NA t3827.T002205 4 Time flower to pod GWAS FarmCPU Segregants F2 NA 12723570 0 0 0 0 7.1531419060107e 10.1002/tpg2.20408 NA NA t3827.T002206 4 Time flower to pod GWAS FarmCPU Segregants F2 NA 15459501 0 0 0 0 1.50490683118811 10.1002/tpg2.20408 NA NA t3827.T002207 4 Time flower to pod GWAS FarmCPU Segregants F2 NA 19404224 0 0 0 0 8.49893282351735 10.1002/tpg2.20408 NA NA t3827.T002208 4 Time flower to pod GWAS FarmCPU Segregants F2 NA 19407728 0 0 0 0 8.55157753955518 10.1002/tpg2.20408 NA NA t3827.T002209 4 Time flower to pod GWAS FarmCPU Segregants F2 NA 33193432 0 0 0 0 8.93257392504278 10.1002/tpg2.20408 NA NA t3827.T002210 4 Time flower to pod GWAS FarmCPU Segregants F2 NA 33534820 0 0 0 0 3.94086786893792 10.1002/tpg2.20408 NA NA t3827.T002211 4 Time flower to pod GWAS FarmCPU Segregants F2 NA 34382344 0 0 0 0 2.16422044651655 10.1002/tpg2.20408 NA NA t3827.T002212 4 Time flower to pod GWAS FarmCPU Segregants F2 NA 34382344 0 0 0 0 2.89109303046977 10.1002/tpg2.20408 NA NA t3827.T002213 4 Time flower to pod GWAS FarmCPU Segregants F2 NA 42212910 0 0 0 0 1.40181858052413 10.1002/tpg2.20408 NA NA t3827.T002214 4 Time flower to pod GWAS FarmCPU Segregants F2 NA 50346729 0 0 0 0 6.4939335946102e 10.1002/tpg2.20408 NA NA t3827.T002215 4 Time flower to pod GWAS FarmCPU Segregants F2 NA 57308167 0 0 0 0 1.81674440210413 10.1002/tpg2.20408 NA NA t3827.T002216 4 Time flower to pod GWAS FarmCPU Segregants F2 NA 58159501 0 0 0 0 6.82570445118062 10.1002/tpg2.20408 NA NA t3827.T002217 4 Time flower to pod GWAS FarmCPU Segregants F2 NA 62806661 0 0 0 0 3.55847121204216 10.1002/tpg2.20408 NA NA t3827.T002218 4 Time flower to pod GWAS FarmCPU Segregants F2 NA 9503231 0 0 0 0 3.0901937515025e 10.1002/tpg2.20408 NA NA t3827.T002219 4 Time to flower GWAS FarmCPU Segregants F2 NA 12787782 0 0 0 0 1.21429678685247 10.1002/tpg2.20408 NA NA t3827.T002220 4 Time to flower GWAS FarmCPU Segregants F2 NA 14640247 0 0 0 0 1.33807527558503 10.1002/tpg2.20408 NA NA t3827.T002221 4 Time to flower GWAS FarmCPU Segregants F2 NA 15167828 0 0 0 0 2.24573034728957 10.1002/tpg2.20408 NA NA t3827.T002222 4 Time to flower GWAS FarmCPU Segregants F2 NA 15167828 0 0 0 0 2.27002029245865 10.1002/tpg2.20408 NA NA t3827.T002223 4 Time to flower GWAS FarmCPU Segregants F2 NA 16440092 0 0 0 0 2.99516971951145 10.1002/tpg2.20408 NA NA t3827.T002224 4 Time to flower GWAS FarmCPU Segregants F2 NA 1666830 0 0 0 0 1.78125481279183 10.1002/tpg2.20408 NA NA t3827.T002225 4 Time to flower GWAS FarmCPU Segregants F2 NA 1892704 0 0 0 0 2.46533998137851 10.1002/tpg2.20408 NA NA t3827.T002226 4 Time to flower GWAS FarmCPU Segregants F2 NA 19749198 0 0 0 0 1.48146463066687 10.1002/tpg2.20408 NA NA t3827.T002227 4 Time to flower GWAS FarmCPU Segregants F2 NA 19871589 0 0 0 0 1.37774324644136 10.1002/tpg2.20408 NA NA t3827.T002228 4 Time to flower GWAS FarmCPU Segregants F2 NA 21330734 0 0 0 0 1.89098146120558 10.1002/tpg2.20408 NA NA t3827.T002229 4 Time to flower GWAS FarmCPU Segregants F2 NA 22876157 0 0 0 0 1.34568503410672 10.1002/tpg2.20408 NA NA t3827.T002230 4 Time to flower GWAS FarmCPU Segregants F2 NA 22921100 0 0 0 0 6.3383263783469e 10.1002/tpg2.20408 NA NA t3827.T002231 4 Time to flower GWAS FarmCPU Segregants F2 NA 28294933 0 0 0 0 5.49536241561309 10.1002/tpg2.20408 NA NA t3827.T002232 4 Time to flower GWAS FarmCPU Segregants F2 NA 28809539 0 0 0 0 1.64242832504638 10.1002/tpg2.20408 NA NA t3827.T002233 4 Time to flower GWAS FarmCPU Segregants F2 NA 29835303 0 0 0 0 5.8392720940493e 10.1002/tpg2.20408 NA NA t3827.T002234 4 Time to flower GWAS FarmCPU Segregants F2 NA 30408465 0 0 0 0 5.50245571810982 10.1002/tpg2.20408 NA NA t3827.T002235 4 Time to flower GWAS FarmCPU Segregants F2 NA 33749754 0 0 0 0 1.43429728123211 10.1002/tpg2.20408 NA NA t3827.T002236 4 Time to flower GWAS FarmCPU Segregants F2 NA 33821890 0 0 0 0 8.34834549887399 10.1002/tpg2.20408 NA NA t3827.T002237 4 Time to flower GWAS FarmCPU Segregants F2 NA 34102904 0 0 0 0 1.34812361981601 10.1002/tpg2.20408 NA NA t3827.T002238 4 Time to flower GWAS FarmCPU Segregants F2 NA 34382344 0 0 0 0 1.02794455254763 10.1002/tpg2.20408 NA NA t3827.T002239 4 Time to flower GWAS FarmCPU Segregants F2 NA 34382344 0 0 0 0 1.93544026004008 10.1002/tpg2.20408 NA NA t3827.T002240 4 Time to flower GWAS FarmCPU Segregants F2 NA 34915900 0 0 0 0 8.20883537947513 10.1002/tpg2.20408 NA NA t3827.T002241 4 Time to flower GWAS FarmCPU Segregants F2 NA 34975027 0 0 0 0 1.30631500114144 10.1002/tpg2.20408 NA NA t3827.T002242 4 Time to flower GWAS FarmCPU Segregants F2 NA 34975027 0 0 0 0 2.24155257035586 10.1002/tpg2.20408 NA NA t3827.T002243 4 Time to flower GWAS FarmCPU Segregants F2 NA 34975027 0 0 0 0 4.40917189246894 10.1002/tpg2.20408 NA NA t3827.T002244 4 Time to flower GWAS FarmCPU Segregants F2 NA 35029255 0 0 0 0 2.66552910019463 10.1002/tpg2.20408 NA NA t3827.T002245 4 Time to flower GWAS FarmCPU Segregants F2 NA 35087079 0 0 0 0 4.6118435790927e 10.1002/tpg2.20408 NA NA t3827.T002246 4 Time to flower GWAS FarmCPU Segregants F2 NA 35110503 0 0 0 0 1.29977892383736 10.1002/tpg2.20408 NA NA t3827.T002247 4 Time to flower GWAS FarmCPU Segregants F2 NA 35151753 0 0 0 0 1.18602585238242 10.1002/tpg2.20408 NA NA t3827.T002248 4 Time to flower GWAS FarmCPU Segregants F2 NA 35295896 0 0 0 0 2.78915277514719 10.1002/tpg2.20408 NA NA t3827.T002249 4 Time to flower GWAS FarmCPU Segregants F2 NA 35295896 0 0 0 0 6.61407641138831 10.1002/tpg2.20408 NA NA t3827.T002250 4 Time to flower GWAS FarmCPU Segregants F2 NA 35317534 0 0 0 0 3.01564197240814 10.1002/tpg2.20408 NA NA t3827.T002251 4 Time to flower GWAS FarmCPU Segregants F2 NA 35317600 0 0 0 0 3.19745696853035 10.1002/tpg2.20408 NA NA t3827.T002252 4 Time to flower GWAS FarmCPU Segregants F2 NA 35449605 0 0 0 0 4.84156689897032 10.1002/tpg2.20408 NA NA t3827.T002253 4 Time to flower GWAS FarmCPU Segregants F2 NA 35569933 0 0 0 0 7.48345308906741 10.1002/tpg2.20408 NA NA t3827.T002254 4 Time to flower GWAS FarmCPU Segregants F2 NA 35569999 0 0 0 0 2.11209516920058 10.1002/tpg2.20408 NA NA t3827.T002255 4 Time to flower GWAS FarmCPU Segregants F2 NA 35715687 0 0 0 0 6.76250054602296 10.1002/tpg2.20408 NA NA t3827.T002256 4 Time to flower GWAS FarmCPU Segregants F2 NA 35811287 0 0 0 0 8.95355892073866 10.1002/tpg2.20408 NA NA t3827.T002257 4 Time to flower GWAS FarmCPU Segregants F2 NA 36623801 0 0 0 0 3.78882686007375 10.1002/tpg2.20408 NA NA t3827.T002258 4 Time to flower GWAS FarmCPU Segregants F2 NA 36769388 0 0 0 0 1.51666603085743 10.1002/tpg2.20408 NA NA t3827.T002259 4 Time to flower GWAS FarmCPU Segregants F2 NA 37291535 0 0 0 0 2.03507329889412 10.1002/tpg2.20408 NA NA t3827.T002260 4 Time to flower GWAS FarmCPU Segregants F2 NA 37294616 0 0 0 0 2.96296060845199 10.1002/tpg2.20408 NA NA t3827.T002261 4 Time to flower GWAS FarmCPU Segregants F2 NA 39003443 0 0 0 0 4.47643927336748 10.1002/tpg2.20408 NA NA t3827.T002262 4 Time to flower GWAS FarmCPU Segregants F2 NA 41327602 0 0 0 0 6.08185558338486 10.1002/tpg2.20408 NA NA t3827.T002263 4 Time to flower GWAS FarmCPU Segregants F2 NA 46426400 0 0 0 0 2.19886129091793 10.1002/tpg2.20408 NA NA t3827.T002264 4 Time to flower GWAS FarmCPU Segregants F2 NA 47193082 0 0 0 0 1.16989250577783 10.1002/tpg2.20408 NA NA t3827.T002265 4 Time to flower GWAS FarmCPU Segregants F2 NA 47338884 0 0 0 0 5.95426093021358 10.1002/tpg2.20408 NA NA t3827.T002266 4 Time to flower GWAS FarmCPU Segregants F2 NA 48280033 0 0 0 0 6.56410016734024 10.1002/tpg2.20408 NA NA t3827.T002267 4 Time to flower GWAS FarmCPU Segregants F2 NA 50185453 0 0 0 0 1.0346615988305e 10.1002/tpg2.20408 NA NA t3827.T002268 4 Time to flower GWAS FarmCPU Segregants F2 NA 5900436 0 0 0 0 2.24640225800994 10.1002/tpg2.20408 NA NA t3827.T002269 4 Time to flower GWAS FarmCPU Segregants F2 NA 6205433 0 0 0 0 3.67596711460124 10.1002/tpg2.20408 NA NA t3827.T002270 4 Time to flower GWAS FarmCPU Segregants F2 NA 8373525 0 0 0 0 2.16591172322943 10.1002/tpg2.20408 NA NA t3827.T002271 4 Time to flower GWAS FarmCPU Segregants F2 NA 8496619 0 0 0 0 2.03890922057696 10.1002/tpg2.20408 NA NA t3827.T002272 4 Time to flower GWAS FarmCPU Segregants F2 NA 9519838 0 0 0 0 7.77687264545389 10.1002/tpg2.20408 NA NA t3827.T002273 4 Time to pod GWAS FarmCPU Segregants F2 NA 11418478 0 0 0 0 4.56881718324848 10.1002/tpg2.20408 NA NA t3827.T002274 4 Time to pod GWAS FarmCPU Segregants F2 NA 12905026 0 0 0 0 8.26932130135706 10.1002/tpg2.20408 NA NA t3827.T002275 4 Time to pod GWAS FarmCPU Segregants F2 NA 14314532 0 0 0 0 2.77764597909528 10.1002/tpg2.20408 NA NA t3827.T002276 4 Time to pod GWAS FarmCPU Segregants F2 NA 15038533 0 0 0 0 4.22608209596845 10.1002/tpg2.20408 NA NA t3827.T002277 4 Time to pod GWAS FarmCPU Segregants F2 NA 15864616 0 0 0 0 1.66916841910712 10.1002/tpg2.20408 NA NA t3827.T002278 4 Time to pod GWAS FarmCPU Segregants F2 NA 19871589 0 0 0 0 6.68446711073144 10.1002/tpg2.20408 NA NA t3827.T002279 4 Time to pod GWAS FarmCPU Segregants F2 NA 20778894 0 0 0 0 3.97285742036851 10.1002/tpg2.20408 NA NA t3827.T002280 4 Time to pod GWAS FarmCPU Segregants F2 NA 2289031 0 0 0 0 2.12033042650313 10.1002/tpg2.20408 NA NA t3827.T002281 4 Time to pod GWAS FarmCPU Segregants F2 NA 28294933 0 0 0 0 7.33115588065513 10.1002/tpg2.20408 NA NA t3827.T002282 4 Time to pod GWAS FarmCPU Segregants F2 NA 33522885 0 0 0 0 3.99060050591643 10.1002/tpg2.20408 NA NA t3827.T002283 4 Time to pod GWAS FarmCPU Segregants F2 NA 33749754 0 0 0 0 1.42989379556673 10.1002/tpg2.20408 NA NA t3827.T002284 4 Time to pod GWAS FarmCPU Segregants F2 NA 34382344 0 0 0 0 3.36811301045585 10.1002/tpg2.20408 NA NA t3827.T002285 4 Time to pod GWAS FarmCPU Segregants F2 NA 34382344 0 0 0 0 7.93938433882601 10.1002/tpg2.20408 NA NA t3827.T002286 4 Time to pod GWAS FarmCPU Segregants F2 NA 34579183 0 0 0 0 6.93038889600566 10.1002/tpg2.20408 NA NA t3827.T002287 4 Time to pod GWAS FarmCPU Segregants F2 NA 34955868 0 0 0 0 1.56782894485875 10.1002/tpg2.20408 NA NA t3827.T002288 4 Time to pod GWAS FarmCPU Segregants F2 NA 34975027 0 0 0 0 4.62398547707988 10.1002/tpg2.20408 NA NA t3827.T002289 4 Time to pod GWAS FarmCPU Segregants F2 NA 35110503 0 0 0 0 5.54871160167871 10.1002/tpg2.20408 NA NA t3827.T002290 4 Time to pod GWAS FarmCPU Segregants F2 NA 35317600 0 0 0 0 3.21785733162859 10.1002/tpg2.20408 NA NA t3827.T002291 4 Time to pod GWAS FarmCPU Segregants F2 NA 35459079 0 0 0 0 1.42101878288435 10.1002/tpg2.20408 NA NA t3827.T002292 4 Time to pod GWAS FarmCPU Segregants F2 NA 35569251 0 0 0 0 7.83651344976385 10.1002/tpg2.20408 NA NA t3827.T002293 4 Time to pod GWAS FarmCPU Segregants F2 NA 35715687 0 0 0 0 8.16967759961605 10.1002/tpg2.20408 NA NA t3827.T002294 4 Time to pod GWAS FarmCPU Segregants F2 NA 40496248 0 0 0 0 6.94792747337709 10.1002/tpg2.20408 NA NA t3827.T002295 4 Time to pod GWAS FarmCPU Segregants F2 NA 5005361 0 0 0 0 3.51533821013852 10.1002/tpg2.20408 NA NA t3827.T002296 4 Time to pod GWAS FarmCPU Segregants F2 NA 50242198 0 0 0 0 1.50500003393602 10.1002/tpg2.20408 NA NA t3827.T002297 4 Time to pod GWAS FarmCPU Segregants F2 NA 51333951 0 0 0 0 3.87829508303629 10.1002/tpg2.20408 NA NA t3827.T002298 4 Time to pod GWAS FarmCPU Segregants F2 NA 5528179 0 0 0 0 5.06703194493663 10.1002/tpg2.20408 NA NA t3827.T002299 4 Time to pod GWAS FarmCPU Segregants F2 NA 60974171 0 0 0 0 8.86313696877009 10.1002/tpg2.20408 NA NA t3827.T002300 4 Time to pod GWAS FarmCPU Segregants F2 NA 6518856 0 0 0 0 3.8876961374635e 10.1002/tpg2.20408 NA NA t3827.T002301 4 Time to pod GWAS FarmCPU Segregants F2 NA 6612864 0 0 0 0 7.44416035055704 10.1002/tpg2.20408 NA NA t3827.T002302 4 Time to pod GWAS FarmCPU Segregants F2 NA 8650385 0 0 0 0 3.28102308323081 10.1002/tpg2.20408 NA NA t3827.T002303 4 Time to pod GWAS FarmCPU Segregants F2 NA 933579 0 0 0 0 1.67953320138015 10.1002/tpg2.20408 NA NA t3827.T002304 QTL_on_Chr1 4 TR (Transpiration rate) inclusive composite interval map RIL recombinant inbred line NA 1 10100492 0 1 10111521 0 8 2 10.1186/s12870-018-1245-1 NA NA t3827.T002305 QTL_on_Chr1 4 TR (Transpiration rate) inclusive composite interval map RIL recombinant inbred line NA 1 45932222 0 1 45934626 0 178 3 10.1186/s12870-018-1245-1 NA NA t3827.T002306 QTL_on_Chr2 4 TR (Transpiration rate) inclusive composite interval map RIL recombinant inbred line NA 2 2241242 0 2 4309038 0 11 2 10.1186/s12870-018-1245-1 NA NA t3827.T002307 QTL_on_Chr3 4 TR (Transpiration rate) inclusive composite interval map RIL recombinant inbred line NA 3 29064360 0 3 28987359 0 51 5 10.1186/s12870-018-1245-1 NA NA t3827.T002308 QTL_on_Chr7 4 TR (Transpiration rate) inclusive composite interval map RIL recombinant inbred line NA 7 19452801 0 7 16741421 0 32 3 10.1186/s12870-018-1245-1 NA NA t3827.T002309 QTL_on_LG3 4 TR (Transpiration rate) composite interval mapping RIL recombinant inbred line CaM0998 NA 0 0 Ca3_27010875 0 0 42.21 5 10.1186/s12870-018-1245-1 NA NA t3827.T002310 QTL_on_LG3 4 TR (Transpiration rate) composite interval mapping RIL recombinant inbred line TA64 NA 0 0 Ca3_29932504 0 0 51.41 3 10.1186/s12870-018-1245-1 NA NA t3827.T002311 QTL_on_LG4 4 TR (Transpiration rate) composite interval mapping RIL recombinant inbred line Ca4_48457876 NA 0 0 Ca4_47592455 0 0 4.21 3 10.1186/s12870-018-1245-1 NA NA t3827.T002312 QTL_on_LG4 4 TR (Transpiration rate) composite interval mapping RIL recombinant inbred line STMS11 NA 0 0 cpPb_680552 0 0 79.61 3 10.1186/s12870-018-1245-1 NA NA t3827.T002313 QTL_on_LG6 4 TR (Transpiration rate) composite interval mapping RIL recombinant inbred line NCPGR202 NA 0 0 Ca6_58908024 0 0 56.81 3 10.1186/s12870-018-1245-1 NA NA t3827.T002314 QTL_on_LG7 4 TR (Transpiration rate) composite interval mapping RIL recombinant inbred line NCPGR19 NA 0 0 CaM2041 0 0 14.51 3 10.1186/s12870-018-1245-1 NA NA t3827.T002315 QTL_on_LG7 4 TR (Transpiration rate) composite interval mapping RIL recombinant inbred line NCPGR19 NA 0 0 CaM2041 0 0 15.51 3 10.1186/s12870-018-1245-1 NA NA t3827.T002316 QTL_on_LG7 4 TR (Transpiration rate) composite interval mapping RIL recombinant inbred line NCPGR19 NA 0 0 CaM2041 0 0 18.51 4 10.1186/s12870-018-1245-1 NA NA t3827.T002317 QTL_on_LG7 4 TR (Transpiration rate) composite interval mapping RIL recombinant inbred line TA142 NA 0 0 NCPGR19 0 0 49.11 4 10.1186/s12870-018-1245-1 NA NA t3827.T002318 QTL_on_LG7 4 TR (Transpiration rate) composite interval mapping RIL recombinant inbred line TA142 NA 0 0 TR24 0 0 63.51 4 10.1186/s12870-018-1245-1 NA NA t3827.T002319 4 Vernalization response Interval mapping ICC 4958 × PI 489777 F10 TA64 NA 0 0 CaM1515 0 0 27 10.1007/s10681-015-1571-4 NA NA t3827.T002320 QTL_on_Chr4 4 VIG (Plant vigour) inclusive composite interval map RIL recombinant inbred line NA 4 13239546 0 4 13378761 0 45 37 10.1186/s12870-018-1245-1 NA NA t3827.T002321 QTL_on_LG1 4 VIG (Plant vigour) composite interval mapping RIL recombinant inbred line ICCM0009a NA 0 0 STMS21 0 0 22.71 3 10.1186/s12870-018-1245-1 NA NA t3827.T002322 QTL_on_LG1 4 VIG (Plant vigour) composite interval mapping RIL recombinant inbred line cpPb_171485 NA 0 0 STMS21 0 0 6.81 4 10.1186/s12870-018-1245-1 NA NA t3827.T002323 QTL_on_LG3 4 VIG (Plant vigour) composite interval mapping RIL recombinant inbred line CaM1024 NA 0 0 NCPGR49 0 0 13.01 5 10.1186/s12870-018-1245-1 NA NA t3827.T002324 QTL_on_LG3 4 VIG (Plant vigour) composite interval mapping RIL recombinant inbred line CaM1089 NA 0 0 TA6 0 0 14.11 5 10.1186/s12870-018-1245-1 NA NA t3827.T002325 QTL_on_LG3 4 VIG (Plant vigour) composite interval mapping RIL recombinant inbred line CaM0120 NA 0 0 CaM1024 0 0 21.61 6 10.1186/s12870-018-1245-1 NA NA t3827.T002326 QTL_on_LG3 4 VIG (Plant vigour) composite interval mapping RIL recombinant inbred line ICCeM050 NA 0 0 TS58s 0 0 22.81 3 10.1186/s12870-018-1245-1 NA NA t3827.T002327 QTL_on_LG3 4 VIG (Plant vigour) composite interval mapping RIL recombinant inbred line NCPGR268 NA 0 0 NCPGR255 0 0 6.41 3 10.1186/s12870-018-1245-1 NA NA t3827.T002328 QTL_on_LG4 4 VIG (Plant vigour) composite interval mapping RIL recombinant inbred line H4G11 NA 0 0 TR20 0 0 36.11 3 10.1186/s12870-018-1245-1 NA NA t3827.T002329 QTL_on_LG4 4 VIG (Plant vigour) composite interval mapping RIL recombinant inbred line ICCM0249 NA 0 0 NCPGR127 0 0 55.51 4 10.1186/s12870-018-1245-1 NA NA t3827.T002330 QTL_on_LG4 4 VIG (Plant vigour) composite interval mapping RIL recombinant inbred line H1A19 NA 0 0 Ca4_15925936 0 0 57.51 4 10.1186/s12870-018-1245-1 NA NA t3827.T002331 QTL_on_LG4 4 VIG (Plant vigour) composite interval mapping RIL recombinant inbred line Ca4_13840251 NA 0 0 Ca4_11276225 0 0 68.81 36 10.1186/s12870-018-1245-1 NA NA t3827.T002332 QTL_on_LG4 4 VIG (Plant vigour) composite interval mapping RIL recombinant inbred line TAA170 NA 0 0 NCPGR21 0 0 69.11 32 10.1186/s12870-018-1245-1 NA NA t3827.T002333 QTL_on_LG4 4 VIG (Plant vigour) composite interval mapping RIL recombinant inbred line Ca4_13687456 NA 0 0 TAA170 0 0 75.21 39 10.1186/s12870-018-1245-1 NA NA t3827.T002334 QTL_on_LG4 4 VIG (Plant vigour) composite interval mapping RIL recombinant inbred line GA24 NA 0 0 STMS11 0 0 79.01 7 10.1186/s12870-018-1245-1 NA NA t3827.T002335 QTL_on_LG8 4 VIG (Plant vigour) composite interval mapping RIL recombinant inbred line CaM1918 NA 0 0 NCPGR170 0 0 25.91 3 10.1186/s12870-018-1245-1 NA NA t3827.T002336 QTL_on_LG8 4 VIG (Plant vigour) composite interval mapping RIL recombinant inbred line NCPGR164 NA 0 0 Ca8_4106644 0 0 58.91 5 10.1186/s12870-018-1245-1 NA NA t3827.T002337 4 Vigour GWAS FarmCPU Segregants F2 NA 12707345 0 0 0 0 3.66704367843232 10.1002/tpg2.20408 NA NA t3827.T002338 4 Vigour GWAS FarmCPU Segregants F2 NA 16036004 0 0 0 0 4.05549018260332 10.1002/tpg2.20408 NA NA t3827.T002339 4 Vigour GWAS FarmCPU Segregants F2 NA 16440092 0 0 0 0 1.96377411895996 10.1002/tpg2.20408 NA NA t3827.T002340 4 Vigour GWAS FarmCPU Segregants F2 NA 1796781 0 0 0 0 2.97825853061919 10.1002/tpg2.20408 NA NA t3827.T002341 4 Vigour GWAS FarmCPU Segregants F2 NA 21171537 0 0 0 0 3.51497139866257 10.1002/tpg2.20408 NA NA t3827.T002342 4 Vigour GWAS FarmCPU Segregants F2 NA 2138558 0 0 0 0 6.45632256473458 10.1002/tpg2.20408 NA NA t3827.T002343 4 Vigour GWAS FarmCPU Segregants F2 NA 22137228 0 0 0 0 3.08788093829364 10.1002/tpg2.20408 NA NA t3827.T002344 4 Vigour GWAS FarmCPU Segregants F2 NA 29042880 0 0 0 0 1.08162832329984 10.1002/tpg2.20408 NA NA t3827.T002345 4 Vigour GWAS FarmCPU Segregants F2 NA 31842140 0 0 0 0 3.57156738974541 10.1002/tpg2.20408 NA NA t3827.T002346 4 Vigour GWAS FarmCPU Segregants F2 NA 35569999 0 0 0 0 1.12727314067756 10.1002/tpg2.20408 NA NA t3827.T002347 4 Vigour GWAS FarmCPU Segregants F2 NA 40722083 0 0 0 0 1.43778727526377 10.1002/tpg2.20408 NA NA t3827.T002348 4 Vigour GWAS FarmCPU Segregants F2 NA 47338884 0 0 0 0 3.71396108338397 10.1002/tpg2.20408 NA NA t3827.T002349 4 Vigour GWAS FarmCPU Segregants F2 NA 49407143 0 0 0 0 4.5463306631793e 10.1002/tpg2.20408 NA NA t3827.T002350 4 Vigour GWAS FarmCPU Segregants F2 NA 50709189 0 0 0 0 5.49904451047525 10.1002/tpg2.20408 NA NA t3827.T002351 4 Vigour GWAS FarmCPU Segregants F2 NA 50872272 0 0 0 0 3.89224819148826 10.1002/tpg2.20408 NA NA t3827.T002352 4 Vigour GWAS FarmCPU Segregants F2 NA 52331043 0 0 0 0 2.87768911772493 10.1002/tpg2.20408 NA NA t3827.T002353 4 Vigour GWAS FarmCPU Segregants F2 NA 5384760 0 0 0 0 1.44381952598301 10.1002/tpg2.20408 NA NA t3827.T002354 4 Vigour GWAS FarmCPU Segregants F2 NA 5537657 0 0 0 0 8.34993010846404 10.1002/tpg2.20408 NA NA t3827.T002355 4 Vigour GWAS FarmCPU Segregants F2 NA 6249876 0 0 0 0 6.81946522457243 10.1002/tpg2.20408 NA NA t3827.T002356 conWUqtl.1 4 Water use whole genome average interval ma Rupali/Genesis836 population recombinant inbred line SNP14_C14_12_74(C) NA CaLG04 0 0 SNP15_C14_13_06 0 0 71.61 - 72.17 3.0077 10.3389/fpls.2021.667910 NA NA t3827.T002357 saltolWUqtl.1 4 Water use QTL analysis using residuals Rupali/Genesis836 population recombinant inbred line SNP201 NA CaLG04 0 0 SNP2_Ca4_75 0 0 27.87 - 29.89 3.2673 10.3389/fpls.2021.667910 NA NA t3827.T002358 conWUEqtl.1 4 Water use efficiency whole genome average interval ma Rupali/Genesis836 population recombinant inbred line SNP14_C14_12_74(C) NA CaLG04 0 0 SNP15_C14_13_06 0 0 71.61 - 72.17 4.0655 10.3389/fpls.2021.667910 NA NA t3827.T002359 conWUEqtl.2 4 Water use efficiency whole genome average interval ma Rupali/Genesis836 population recombinant inbred line DArT1786 NA CaLG01 0 0 DArT1798 0 0 15.7 - 15.97 4.6183 10.3389/fpls.2021.667910 NA NA t3827.T002360 salWUEqtl.1 4 Water use efficiency whole genome average interval ma Rupali/Genesis836 population recombinant inbred line DArT85 NA CaLG01 0 0 DArT78(C) 0 0 27.79 - 28.07 4.167 10.3389/fpls.2021.667910 NA NA t3827.T002361 conX30AGRqtl.1 4 X30AGR (Absolute growth rate at 30 days after sowing) whole genome average interval ma Rupali/Genesis836 population recombinant inbred line DArT417 NA CaLG04 0 0 SNP203 0 0 88.95 - 90.37 7.6002 10.3389/fpls.2021.667910 NA NA t3827.T002362 salX30AGRqtl.1 4 X30AGR (Absolute growth rate at 30 days after sowing) whole genome average interval ma Rupali/Genesis836 population recombinant inbred line SNP5 NA CaLG01 0 0 DArT1786 0 0 12.46 - 15.7 4.0182 10.3389/fpls.2021.667910 NA NA t3827.T002363 conX34AGRqtl.1 4 X34AGR (Absolute growth rate at 34 days after sowing) whole genome average interval ma Rupali/Genesis836 population recombinant inbred line DArT417 NA CaLG04 0 0 SNP203 0 0 88.95 - 90.37 7.8203 10.3389/fpls.2021.667910 NA NA t3827.T002364 salX34AGRqtl.1 4 X34AGR (Absolute growth rate at 34 days after sowing) whole genome average interval ma Rupali/Genesis836 population recombinant inbred line SNP5 NA CaLG01 0 0 DArT1786 0 0 12.46 - 15.7 3.735 10.3389/fpls.2021.667910 NA NA t3827.T002365 q-Crt-1-JF 5 β-carotene inclusive composite interval map JF F2 AX-123641029 NA 0 0 AX-123617179; AX-123617173 0 0 554 4.1 10.3835/plantgenome2019.07.0067 NA NA t3827.T002366 q-Crt-3-IJ 5 β-carotene inclusive composite interval map IJ F2 AX-123646778 NA 0 0 AX-123659050; AX-123619520 0 0 201 6.1 10.3835/plantgenome2019.07.0067 NA NA t3827.T002367 q-Crt-8-CJ 5 β-carotene inclusive composite interval map CJ F2 AX-123642869 NA 0 0 AX-123637792; CotCol 0 0 99 31 10.3835/plantgenome2019.07.0067 NA NA t3827.T002368 q-Crt-8-IJ 5 β-carotene inclusive composite interval map IJ F2 AX-123642855 NA 0 0 AX-123642846; CotCol 0 0 29 24.5 10.3835/plantgenome2019.07.0067 NA NA t3827.T002369 q-Crt-8-JF 5 β-carotene inclusive composite interval map JF F2 AX-123657409 NA 0 0 CotCol; AX-123637790 0 0 177 34.5 10.3835/plantgenome2019.07.0067 NA NA t3827.T002370 q-Cryp-8-CJ 5 β-cryptoxanthin inclusive composite interval map CJ F2 AX-123642874 NA 0 0 AX-123657408; AX-123637792 0 0 97 17.2 10.3835/plantgenome2019.07.0067 NA NA t3827.T002371 q-Cryp-8-IJ 5 β-cryptoxanthin inclusive composite interval map IJ F2 AX-123642855 NA 0 0 AX-123642846; CotCol 0 0 20 17.4 10.3835/plantgenome2019.07.0067 NA NA t3827.T002372 q-Cryp-8-JF 5 β-cryptoxanthin inclusive composite interval map JF F2 AX-123637790 NA 0 0 AX-123657409; CotCol 0 0 176 5.5 10.3835/plantgenome2019.07.0067 NA NA t3827.T002373 5 Ascochyta blight resistance Interval mapping JG 62 × ICCV 05530 F8 ICCM0068 NA 0 0 CaM1158 0 0 2.73 10.1007/s10681-018-2125-3 NA NA t3827.T002374 5 Ascochyta blight resistance Interval mapping JG 62 × ICCV 05530 F8 CKAM0847 NA 0 0 CKAM0964 0 0 2.73 10.1007/s10681-018-2125-3 NA NA t3827.T002375 5 Ascochyta blight resistance Interval mapping JG 62 × ICCV 05530 F8 CKAM0847 NA 0 0 CKAM0964 0 0 2.88 10.1007/s10681-018-2125-3 NA NA t3827.T002376 SNP_112579 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA Scaffold 118041 0 0 0 0.00028025 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002377 SNP_112579 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA Scaffold 118041 0 0 0 0.00045709 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002378 SNP_115302 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA Scaffold 199859 0 0 0 0.0002558 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002379 SNP_115302 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA Scaffold 199859 0 0 0 0.964 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002380 SNP_119126 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA Scaffold 33329 0 0 0 0.0957 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002381 SNP_119126 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA Scaffold 33329 0 0 0 0.82 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002382 SNP_119127 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA Scaffold 33333 0 0 0 0.0957 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002383 SNP_119127 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA Scaffold 33333 0 0 0 0.82 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002384 SNP_120011 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA Scaffold 247858 0 0 0 0.00024478 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002385 SNP_120011 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA Scaffold 247858 0 0 0 0.00037667 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002386 SNP_120014 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA Scaffold 274048 0 0 0 0.00028767 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002387 SNP_120014 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA Scaffold 274048 0 0 0 0.154 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002388 SNP_120015 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA Scaffold 274048 0 0 0 0.00028767 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002389 SNP_120015 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA Scaffold 274048 0 0 0 0.154 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002390 SNP_14840 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 2 2425729 0 0 0 0.00042774 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002391 SNP_14840 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 2 2425729 0 0 0 0.91 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002392 SNP_20653 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 2 25844115 0 0 0 0.0004164 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002393 SNP_20653 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 2 25844115 0 0 0 0.0588 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002394 SNP_26675 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 3 14666235 0 0 0 0.226 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002395 SNP_26675 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 3 14666235 0 0 0 0.556 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002396 SNP_27968 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 1 20223440 0 0 0 0.000333 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002397 SNP_27968 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 1 20223440 0 0 0 0.655 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002398 SNP_28985 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 3 22354264 0 0 0 0.00023891 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002399 SNP_28985 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 3 22354264 0 0 0 0.0446 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002400 SNP_2964 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 3 6379266 0 0 0 0.0003002 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002401 SNP_2964 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 3 6379266 0 0 0 0.0118 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002402 SNP_32068 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 3 29601182 0 0 0 0.00034555 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002403 SNP_32068 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 3 29601182 0 0 0 0.296 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002404 SNP_35415 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 3 37022213 0 0 0 0.00025032 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002405 SNP_35415 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 3 37022213 0 0 0 0.292 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002406 SNP_57203 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 5 23261247 0 0 0 0.00016852 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002407 SNP_57203 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 5 23261247 0 0 0 0.744 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002408 SNP_58925 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 5 28456006 0 0 0 0.000483 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002409 SNP_58925 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 5 28456006 0 0 0 0.163 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002410 SNP_58925 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 5 28456006 0 0 0 0.972 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002411 SNP_58925 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 5 28456006 0 0 0 1.52 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002412 SNP_68274 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 6 2297220 0 0 0 0.00026336 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002413 SNP_68274 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 6 2297220 0 0 0 0.00041752 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002414 SNP_68494 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 6 2776447 0 0 0 0.00036093 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002415 SNP_68494 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 6 2776447 0 0 0 0.165 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002416 SNP_75606 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 6 21206484 0 0 0 0.00024829 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002417 SNP_75606 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 6 21206484 0 0 0 0.0275 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002418 SNP_83982 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 6 55672113 0 0 0 0.00033363 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002419 SNP_83982 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 6 55672113 0 0 0 0.246 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002420 SNP_93097 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 7 19207200 0 0 0 0.00028186 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002421 SNP_93097 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 7 19207200 0 0 0 0.00327 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002422 SNP_94590 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 7 27605515 0 0 0 0.00050935 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002423 SNP_94590 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 7 27605515 0 0 0 0.32 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002424 SNP_94590 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 7 27605515 0 0 0 0.591 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002425 SNP_94590 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 7 27605515 0 0 0 0.747 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002426 SNP_97507 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 7 37162495 0 0 0 0.00013807 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002427 SNP_97507 5 Copper concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 7 37162495 0 0 0 0.00015657 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002428 5 Crude protein content Marker-trait association Desi and kabuli GA11.154 NA 0 0 0 0 0.017 10.1007/s12041-015-0529-6 NA NA t3827.T002429 5 Crude protein content Marker-trait association Desi and kabuli GA11.156 NA 0 0 0 0 0.017 10.1007/s12041-015-0529-6 NA NA t3827.T002430 5 Crude protein content Marker-trait association Desi and kabuli GA11.150 NA 0 0 0 0 0.04 10.1007/s12041-015-0529-6 NA NA t3827.T002431 5 Crude protein content Marker-trait association Desi and kabuli H2B061.162 NA 0 0 0 0 0.035 10.1007/s12041-015-0529-6 NA NA t3827.T002432 5 Crude protein content Marker-trait association Desi and kabuli H2B061.159 NA 0 0 0 0 0.036 10.1007/s12041-015-0529-6 NA NA t3827.T002433 5 Crude protein content Marker-trait association Desi and kabuli TR26.231 NA 0 0 0 0 0.004, 0.008 10.1007/s12041-015-0529-6 NA NA t3827.T002434 5 Crude protein content Marker-trait association Desi and kabuli TR56.253 NA 0 0 0 0 0.004, 0.010 10.1007/s12041-015-0529-6 NA NA t3827.T002435 5 Crude protein content Marker-trait association Desi and kabuli TR26.234 NA 0 0 0 0 0.007 10.1007/s12041-015-0529-6 NA NA t3827.T002436 5 Crude protein content Marker-trait association Desi and kabuli CaM1122.255 NA 0 0 0 0 0.010, 0.023 10.1007/s12041-015-0529-6 NA NA t3827.T002437 5 Crude protein content Marker-trait association Desi and kabuli TR26.205 NA 0 0 0 0 0.023 10.1007/s12041-015-0529-6 NA NA t3827.T002438 5 Crude protein content Marker-trait association Desi and kabuli TR26.217 NA 0 0 0 0 0.023 10.1007/s12041-015-0529-6 NA NA t3827.T002439 5 Crude protein content Marker-trait association Desi and kabuli CaM1122.239 NA 0 0 0 0 0.026 10.1007/s12041-015-0529-6 NA NA t3827.T002440 5 Crude protein content Marker-trait association Desi and kabuli TR56.234 NA 0 0 0 0 0.029 10.1007/s12041-015-0529-6 NA NA t3827.T002441 5 Crude protein content Marker-trait association Desi and kabuli CaM1122.239 NA 0 0 0 0 0.032, 0.039 10.1007/s12041-015-0529-6 NA NA t3827.T002442 5 Crude protein content Marker-trait association Desi and kabuli CaM1122.239 NA 0 0 0 0 0.038 10.1007/s12041-015-0529-6 NA NA t3827.T002443 5 Crude protein content Marker-trait association Desi and kabuli CaM1515.246 NA 0 0 0 0 0.038 10.1007/s12041-015-0529-6 NA NA t3827.T002444 5 Crude protein content Marker-trait association Desi and kabuli TR26.205 NA 0 0 0 0 0.04 10.1007/s12041-015-0529-6 NA NA t3827.T002445 5 Crude protein content Marker-trait association Desi and kabuli TR26.208 NA 0 0 0 0 0.045 10.1007/s12041-015-0529-6 NA NA t3827.T002446 5 Crude protein content Marker-trait association Desi and kabuli TR56.253 NA 0 0 0 0 0.048 10.1007/s12041-015-0529-6 NA NA t3827.T002447 5 Crude protein content Marker-trait association Desi and kabuli ICCM0249.142 NA 0 0 0 0 0.033 10.1007/s12041-015-0529-6 NA NA t3827.T002448 5 Crude protein content Marker-trait association Desi and kabuli ICCM0249.142 NA 0 0 0 0 0.041 10.1007/s12041-015-0529-6 NA NA t3827.T002449 5 Crude protein content Marker-trait association Desi and kabuli ICCM0249.136 NA 0 0 0 0 0.046 10.1007/s12041-015-0529-6 NA NA t3827.T002450 5 Crude protein content Marker-trait association Desi and kabuli CaM1068.195 NA 0 0 0 0 0.019 10.1007/s12041-015-0529-6 NA NA t3827.T002451 5 Crude protein content Marker-trait association Desi and kabuli CaM1068.207 NA 0 0 0 0 0.037 10.1007/s12041-015-0529-6 NA NA t3827.T002452 5 Crude protein content Marker-trait association Desi and kabuli CaM1068.195 NA 0 0 0 0 0.048 10.1007/s12041-015-0529-6 NA NA t3827.T002453 5 Delta carbon ratio ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA CaLG04 139220 0 bin_4_13378761 0 0 0.23 6.11 10.1038/srep15296 NA NA t3827.T002454 5 Delta carbon ratio ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_42549627 NA 0 0 bin_4_43207105 0 0 3.3299 10.1038/srep15296 NA NA t3827.T002455 5 Delta carbon ratio ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_1710658 NA 0 0 bin_4_1713134 0 0 4.4351 10.1038/srep15296 NA NA t3827.T002456 5 Delta carbon ratio ICIM-ADD mapping ICC 4958 × ICC 1882 RIL bin_4_13239546 NA 0 0 bin_4_13378761 0 0 6.1134 10.1038/srep15296 NA NA t3827.T002457 5 Fusarium wilt resistance Interval mapping JG 62 × ICCV 05530 F8 TR19 NA 0 0 H2B061 0 0 18.54 10.1007/s10681-018-2125-3 NA NA t3827.T002458 5 Fusarium wilt resistance Interval mapping JG 62 × ICCV 05530 F8 TR19 NA 0 0 H2B061 0 0 12.31 10.1007/s10681-018-2125-3 NA NA t3827.T002459 5 Fusarium wilt resistance Interval mapping JG 62 × ICCV 05530 F8 TA132 NA 0 0 TA46 0 0 5.6 10.1007/s10681-018-2125-3 NA NA t3827.T002460 5 Fusarium wilt resistance Interval mapping JG 62 × ICCV 05530 F8 TA80 NA 0 0 CaM0594 0 0 4.38 10.1007/s10681-018-2125-3 NA NA t3827.T002461 5 Fusarium wilt resistance Interval mapping JG 62 × ICCV 05530 F8 CKAM1256 NA 0 0 TS72 0 0 21.02 10.1007/s10681-018-2125-3 NA NA t3827.T002462 5 Fusarium wilt resistance Interval mapping K850 × WR315 F10-F11 GSSR 18 NA 0 0 TC14801 0 0 316.71 4.43 10.1007/s12041-015-0589-7 NA NA t3827.T002463 5 Fusarium wilt resistance Interval mapping K850 × WR315 F10-F11 TR 24 NA 0 0 EST SSR 21 0 0 32.01 4.43 10.1007/s12041-015-0589-7 NA NA t3827.T002464 5 Fusarium wilt resistance Interval mapping K850 × WR315 F10-F11 GSSR 18 NA 0 0 TC14801 0 0 340.71 8.9 10.1007/s12041-015-0589-7 NA NA t3827.T002465 5 Fusarium wilt resistance Interval mapping K850 × WR315 F10-F11 GSSR 11 NA 0 0 EST SSR 3 0 0 559.81 3.05 10.1007/s12041-015-0589-7 NA NA t3827.T002466 5 Fusarium wilt resistance Interval mapping K850 × WR315 F10-F11 EST SSR 21 NA 0 0 EST SSR 65 0 0 95.51 3.13 10.1007/s12041-015-0589-7 NA NA t3827.T002467 5 Iron Association mapping 94 desi and kabuli accessions Cav1sc19.1p1556596 NA Chr 1 3029714 0 0 0 3.22 10.1139/gen-2014-0108 NA NA t3827.T002468 5 Iron Association mapping 94 desi and kabuli accessions Cav1sc25.1p2526411 NA Chr 4 3992545 0 0 0 3.74 10.1139/gen-2014-0108 NA NA t3827.T002469 5 Iron Association mapping 94 desi and kabuli accessions Cav1sc25.1p2521450 NA Chr 4 3997506 0 0 0 3.74 10.1139/gen-2014-0108 NA NA t3827.T002470 5 Iron Association mapping 94 desi and kabuli accessions Cav1sc147.1p592256 NA Chr 6 54857915 0 0 0 3.16 10.1139/gen-2014-0108 NA NA t3827.T002471 q-Lut-1-JF 5 Lutein inclusive composite interval map JF F2 AX-123638575 NA 0 0 AX-123615858; AX-123615414 0 0 618 5.9 10.3835/plantgenome2019.07.0067 NA NA t3827.T002472 q-Lut-8-CJ 5 Lutein inclusive composite interval map CJ F2 AX-123637792 NA 0 0 CotCol; AX-123642869 0 0 101 8.3 10.3835/plantgenome2019.07.0067 NA NA t3827.T002473 q-Lut-8-IJ 5 Lutein inclusive composite interval map IJ F2 AX-123637737 NA 0 0 CotCol; AX-123642855 0 0 30 7.6 10.3835/plantgenome2019.07.0067 NA NA t3827.T002474 SNP_109534 5 Phosphorus concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA Scaffold 424051 0 0 0 0.00030936 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002475 SNP_109534 5 Phosphorus concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA Scaffold 424051 0 0 0 0.213 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002476 SNP_109534 5 Phosphorus concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA Scaffold 424051 0 0 0 0.964 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002477 SNP_41348 5 Phosphorus concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 4 9390211 0 0 0 0.00010469 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002478 SNP_41348 5 Phosphorus concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 4 9390211 0 0 0 0.00042633 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002479 SNP_41348 5 Phosphorus concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 4 9390211 0 0 0 0.01279 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002480 SNP_42103 5 Phosphorus concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 4 10932973 0 0 0 0.00012571 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002481 SNP_42103 5 Phosphorus concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 4 10932973 0 0 0 0.00047422 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002482 SNP_42103 5 Phosphorus concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 4 10932973 0 0 0 0.0059 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002483 SNP_4448 5 Phosphorus concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 1 9721763 0 0 0 0.00149 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002484 SNP_4448 5 Phosphorus concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 1 9721763 0 0 0 0.467 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002485 SNP_4448 5 Phosphorus concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 1 9721763 0 0 0 0.935 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002486 SNP_98349 5 Potassium concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 7 40282053 0 0 0 0.00036042 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002487 SNP_98349 5 Potassium concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 7 40282053 0 0 0 0.75 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002488 SNP_98350 5 Potassium concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 7 40282062 0 0 0 0.00036042 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002489 SNP_98350 5 Potassium concentration mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 7 40282062 0 0 0 0.75 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002490 qPRO-1.1 5 PRO (protein concentration) general linear model (GLM)-based RIL recombinant inbred line Ca1:363821 NA 0 0 Ca1:1162304 0 0 4.8 10.1007/s00122-019-03277-5 NA NA t3827.T002491 qPRO-3.1 5 PRO (protein concentration) general linear model (GLM)-based RIL recombinant inbred line Ca3:7351552 NA 0 0 Ca3:10193673 0 0 29.9 10.1007/s00122-019-03277-5 NA NA t3827.T002492 qPRO-3.2 5 PRO (protein concentration) general linear model (GLM)-based RIL recombinant inbred line Ca3:22724462 NA 0 0 CaGM13632 0 0 86.7 10.1007/s00122-019-03277-5 NA NA t3827.T002493 qPRO-6.2 5 PRO (protein concentration) general linear model (GLM)-based RIL recombinant inbred line Ca6:2432945 NA 0 0 Ca6:3140044 0 0 46.1 10.1007/s00122-019-03277-5 NA NA t3827.T002494 qPRO-ABE-1.1 5 PRO (protein concentration) general linear model (GLM)-based RIL recombinant inbred line Ca1:363821 NA 0 0 Ca1:1162304 0 0 2.8 10.1007/s00122-019-03277-5 NA NA t3827.T002495 qPRO-ABE-3.2 5 PRO (protein concentration) general linear model (GLM)-based RIL recombinant inbred line Ca3:22724462 NA 0 0 CaGM13632 0 0 86.7 10.1007/s00122-019-03277-5 NA NA t3827.T002496 qPRO-BIG_6.2 5 PRO (protein concentration) general linear model (GLM)-based RIL recombinant inbred line Ca6:2432945 NA 0 0 Ca6:3140044 0 0 45.1 10.1007/s00122-019-03277-5 NA NA t3827.T002497 qPRO-BIG-3.2 5 PRO (protein concentration) general linear model (GLM)-based RIL recombinant inbred line Ca3:22724462 NA 0 0 CaGM13632 0 0 86.7 10.1007/s00122-019-03277-5 NA NA t3827.T002498 qPRO-GH-1.1 5 PRO (protein concentration) general linear model (GLM)-based RIL recombinant inbred line Ca1:363821 NA 0 0 Ca1:1162304 0 0 4.8 10.1007/s00122-019-03277-5 NA NA t3827.T002499 qPRO-GH-3.2 5 PRO (protein concentration) general linear model (GLM)-based RIL recombinant inbred line Ca3:22724462 NA 0 0 CaGM13632 0 0 86.7 10.1007/s00122-019-03277-5 NA NA t3827.T002500 qPRO-ICR-1.1 5 PRO (protein concentration) general linear model (GLM)-based RIL recombinant inbred line Ca1:363821 NA 0 0 Ca1:1162304 0 0 2.8 10.1007/s00122-019-03277-5 NA NA t3827.T002501 qPRO-ICR-3.2 5 PRO (protein concentration) general linear model (GLM)-based RIL recombinant inbred line Ca3:22724462 NA 0 0 CaGM13632 0 0 86.7 10.1007/s00122-019-03277-5 NA NA t3827.T002502 QTL_aha10_Ca3_23262576 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line aha10(Ca3:23262576) NA 0 0 0 0 3.39166839190615 10.1007/s00122-019-03277-5 NA NA t3827.T002503 QTL_AN3 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line AN3 NA 0 0 0 0 4.59916306665313 10.1007/s00122-019-03277-5 NA NA t3827.T002504 QTL_Ca3_18996437 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line Ca3_18996437 NA 0 0 0 0 5.20063826549014 10.1007/s00122-019-03277-5 NA NA t3827.T002505 QTL_Ca3_19821186 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line Ca3_19821186 NA 0 0 0 0 3.15102942189596 10.1007/s00122-019-03277-5 NA NA t3827.T002506 QTL_Ca3_19853745 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line Ca3_19853745 NA 0 0 0 0 5.05829023294886 10.1007/s00122-019-03277-5 NA NA t3827.T002507 QTL_Ca3_19853805 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line Ca3_19853805 NA 0 0 0 0 5.05829023294886 10.1007/s00122-019-03277-5 NA NA t3827.T002508 QTL_Ca3_19908491 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line Ca3_19908491 NA 0 0 0 0 4.89764654238801 10.1007/s00122-019-03277-5 NA NA t3827.T002509 QTL_Ca3_19908527 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line Ca3_19908527 NA 0 0 0 0 3.38034250448736 10.1007/s00122-019-03277-5 NA NA t3827.T002510 QTL_Ca3_19921595 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line Ca3_19921595 NA 0 0 0 0 1.60840926891215 10.1007/s00122-019-03277-5 NA NA t3827.T002511 QTL_Ca3_19921611 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line Ca3_19921611 NA 0 0 0 0 1.00423484515631 10.1007/s00122-019-03277-5 NA NA t3827.T002512 QTL_Ca3_20045543 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line Ca3_20045543 NA 0 0 0 0 4.59321472798946 10.1007/s00122-019-03277-5 NA NA t3827.T002513 QTL_Ca3_20122534 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line Ca3_20122534 NA 0 0 0 0 1.08184500094945 10.1007/s00122-019-03277-5 NA NA t3827.T002514 QTL_Ca3_20177050 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line Ca3_20177050 NA 0 0 0 0 5.41703088660862 10.1007/s00122-019-03277-5 NA NA t3827.T002515 QTL_Ca3_20177055 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line Ca3_20177055 NA 0 0 0 0 1.06430587946064 10.1007/s00122-019-03277-5 NA NA t3827.T002516 QTL_Ca3_21283920 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line Ca3_21283920 NA 0 0 0 0 6.43058991499092 10.1007/s00122-019-03277-5 NA NA t3827.T002517 QTL_Ca3_21283925 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line Ca3_21283925 NA 0 0 0 0 2.59417422810931 10.1007/s00122-019-03277-5 NA NA t3827.T002518 QTL_Ca3_21283949 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line Ca3_21283949 NA 0 0 0 0 6.14618895059523 10.1007/s00122-019-03277-5 NA NA t3827.T002519 QTL_Ca3_21706963 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line Ca3_21706963 NA 0 0 0 0 6.94238577220234 10.1007/s00122-019-03277-5 NA NA t3827.T002520 QTL_Ca3_21706964 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line Ca3_21706964 NA 0 0 0 0 6.94238577220234 10.1007/s00122-019-03277-5 NA NA t3827.T002521 QTL_Ca3_21758600 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line Ca3_21758600 NA 0 0 0 0 7.53328342215019 10.1007/s00122-019-03277-5 NA NA t3827.T002522 QTL_Ca3_21775854 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line Ca3_21775854 NA 0 0 0 0 2.48817069005142 10.1007/s00122-019-03277-5 NA NA t3827.T002523 QTL_Ca3_21777546 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line Ca3_21777546 NA 0 0 0 0 2.79971860392199 10.1007/s00122-019-03277-5 NA NA t3827.T002524 QTL_Ca3_21777560 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line Ca3_21777560 NA 0 0 0 0 2.84329636740207 10.1007/s00122-019-03277-5 NA NA t3827.T002525 QTL_Ca3_21783183 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line Ca3_21783183 NA 0 0 0 0 2.14396803641849 10.1007/s00122-019-03277-5 NA NA t3827.T002526 QTL_Ca3_21806637 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line Ca3_21806637 NA 0 0 0 0 3.10816439810591 10.1007/s00122-019-03277-5 NA NA t3827.T002527 QTL_Ca3_22724462 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line Ca3_22724462 NA 0 0 0 0 1.84237047893146 10.1007/s00122-019-03277-5 NA NA t3827.T002528 QTL_CaGM13632_Ca3_23246513 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line CaGM13632(Ca3:23246513) NA 0 0 0 0 3.39166839190615 10.1007/s00122-019-03277-5 NA NA t3827.T002529 QTL_CaGM13641_Ca3_23312509 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line CaGM13641(Ca3:23312509) NA 0 0 0 0 7.50122389398254 10.1007/s00122-019-03277-5 NA NA t3827.T002530 QTL_Scaffold8586_900 5 PRO_ABE (protein concentration_Aberdeen) GLM model RIL recombinant inbred line Scaffold8586_900 NA 0 0 0 0 8.21671512789355 10.1007/s00122-019-03277-5 NA NA t3827.T002531 QTL_aha10_Ca3_23262576 5 PRO_BIG (protein concentration_Biggar) GLM model RIL recombinant inbred line aha10(Ca3:23262576) NA 0 0 0 0 1.25757003615005 10.1007/s00122-019-03277-5 NA NA t3827.T002532 QTL_AN3 5 PRO_BIG (protein concentration_Biggar) GLM model RIL recombinant inbred line AN3 NA 0 0 0 0 5.75368785859441 10.1007/s00122-019-03277-5 NA NA t3827.T002533 QTL_Ca3_21283920 5 PRO_BIG (protein concentration_Biggar) GLM model RIL recombinant inbred line Ca3_21283920 NA 0 0 0 0 7.10266352592445 10.1007/s00122-019-03277-5 NA NA t3827.T002534 QTL_Ca3_21283925 5 PRO_BIG (protein concentration_Biggar) GLM model RIL recombinant inbred line Ca3_21283925 NA 0 0 0 0 8.30251242935822 10.1007/s00122-019-03277-5 NA NA t3827.T002535 QTL_Ca3_21283949 5 PRO_BIG (protein concentration_Biggar) GLM model RIL recombinant inbred line Ca3_21283949 NA 0 0 0 0 5.96073207447257 10.1007/s00122-019-03277-5 NA NA t3827.T002536 QTL_Ca3_21706963 5 PRO_BIG (protein concentration_Biggar) GLM model RIL recombinant inbred line Ca3_21706963 NA 0 0 0 0 9.19561629751638 10.1007/s00122-019-03277-5 NA NA t3827.T002537 QTL_Ca3_21706964 5 PRO_BIG (protein concentration_Biggar) GLM model RIL recombinant inbred line Ca3_21706964 NA 0 0 0 0 9.19561629751649 10.1007/s00122-019-03277-5 NA NA t3827.T002538 QTL_Ca3_21758600 5 PRO_BIG (protein concentration_Biggar) GLM model RIL recombinant inbred line Ca3_21758600 NA 0 0 0 0 3.41945006777125 10.1007/s00122-019-03277-5 NA NA t3827.T002539 QTL_Ca3_21775854 5 PRO_BIG (protein concentration_Biggar) GLM model RIL recombinant inbred line Ca3_21775854 NA 0 0 0 0 2.46140013788083 10.1007/s00122-019-03277-5 NA NA t3827.T002540 QTL_Ca3_21777546 5 PRO_BIG (protein concentration_Biggar) GLM model RIL recombinant inbred line Ca3_21777546 NA 0 0 0 0 1.61556458565863 10.1007/s00122-019-03277-5 NA NA t3827.T002541 QTL_Ca3_21777560 5 PRO_BIG (protein concentration_Biggar) GLM model RIL recombinant inbred line Ca3_21777560 NA 0 0 0 0 1.34448412351922 10.1007/s00122-019-03277-5 NA NA t3827.T002542 QTL_Ca3_21783183 5 PRO_BIG (protein concentration_Biggar) GLM model RIL recombinant inbred line Ca3_21783183 NA 0 0 0 0 1.7547718992909e 10.1007/s00122-019-03277-5 NA NA t3827.T002543 QTL_Ca3_21806637 5 PRO_BIG (protein concentration_Biggar) GLM model RIL recombinant inbred line Ca3_21806637 NA 0 0 0 0 1.09857478478838 10.1007/s00122-019-03277-5 NA NA t3827.T002544 QTL_Ca3_22724462 5 PRO_BIG (protein concentration_Biggar) GLM model RIL recombinant inbred line Ca3_22724462 NA 0 0 0 0 1.22723504861875 10.1007/s00122-019-03277-5 NA NA t3827.T002545 QTL_CaGM13632_Ca3_23246513 5 PRO_BIG (protein concentration_Biggar) GLM model RIL recombinant inbred line CaGM13632(Ca3:23246513) NA 0 0 0 0 1.25757003615005 10.1007/s00122-019-03277-5 NA NA t3827.T002546 QTL_CaGM13641_Ca3_23312509 5 PRO_BIG (protein concentration_Biggar) GLM model RIL recombinant inbred line CaGM13641(Ca3:23312509) NA 0 0 0 0 7.43797324694229 10.1007/s00122-019-03277-5 NA NA t3827.T002547 QTL_Scaffold8586_900 5 PRO_BIG (protein concentration_Biggar) GLM model RIL recombinant inbred line Scaffold8586_900 NA 0 0 0 0 6.48719262614809 10.1007/s00122-019-03277-5 NA NA t3827.T002548 QTL_aha10_Ca3_23262576 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line aha10(Ca3:23262576) NA 0 0 0 0 8.93834289812194 10.1007/s00122-019-03277-5 NA NA t3827.T002549 QTL_AN3 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line AN3 NA 0 0 0 0 1.25117797090519 10.1007/s00122-019-03277-5 NA NA t3827.T002550 QTL_Ca1_333974 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line Ca1_333974 NA 0 0 0 0 5.26952533795222 10.1007/s00122-019-03277-5 NA NA t3827.T002551 QTL_Ca3_18996437 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line Ca3_18996437 NA 0 0 0 0 7.06273144714601 10.1007/s00122-019-03277-5 NA NA t3827.T002552 QTL_Ca3_19821186 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line Ca3_19821186 NA 0 0 0 0 2.89158241571471 10.1007/s00122-019-03277-5 NA NA t3827.T002553 QTL_Ca3_19853745 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line Ca3_19853745 NA 0 0 0 0 1.89532804771463 10.1007/s00122-019-03277-5 NA NA t3827.T002554 QTL_Ca3_19853805 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line Ca3_19853805 NA 0 0 0 0 1.89532804771463 10.1007/s00122-019-03277-5 NA NA t3827.T002555 QTL_Ca3_19921595 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line Ca3_19921595 NA 0 0 0 0 5.23278475266637 10.1007/s00122-019-03277-5 NA NA t3827.T002556 QTL_Ca3_19921611 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line Ca3_19921611 NA 0 0 0 0 2.33868891940856 10.1007/s00122-019-03277-5 NA NA t3827.T002557 QTL_Ca3_20045543 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line Ca3_20045543 NA 0 0 0 0 1.96594706728431 10.1007/s00122-019-03277-5 NA NA t3827.T002558 QTL_Ca3_20122534 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line Ca3_20122534 NA 0 0 0 0 1.72218216749519 10.1007/s00122-019-03277-5 NA NA t3827.T002559 QTL_Ca3_20177050 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line Ca3_20177050 NA 0 0 0 0 2.82542038681708 10.1007/s00122-019-03277-5 NA NA t3827.T002560 QTL_Ca3_20177055 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line Ca3_20177055 NA 0 0 0 0 1.54215805236154 10.1007/s00122-019-03277-5 NA NA t3827.T002561 QTL_Ca3_21283920 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line Ca3_21283920 NA 0 0 0 0 1.85205035878424 10.1007/s00122-019-03277-5 NA NA t3827.T002562 QTL_Ca3_21283925 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line Ca3_21283925 NA 0 0 0 0 3.13941743964848 10.1007/s00122-019-03277-5 NA NA t3827.T002563 QTL_Ca3_21283949 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line Ca3_21283949 NA 0 0 0 0 9.07804177621339 10.1007/s00122-019-03277-5 NA NA t3827.T002564 QTL_Ca3_21706963 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line Ca3_21706963 NA 0 0 0 0 3.97721483090884 10.1007/s00122-019-03277-5 NA NA t3827.T002565 QTL_Ca3_21706964 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line Ca3_21706964 NA 0 0 0 0 3.97721483090884 10.1007/s00122-019-03277-5 NA NA t3827.T002566 QTL_Ca3_21758600 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line Ca3_21758600 NA 0 0 0 0 3.05459867832732 10.1007/s00122-019-03277-5 NA NA t3827.T002567 QTL_Ca3_21775854 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line Ca3_21775854 NA 0 0 0 0 6.78336897871082 10.1007/s00122-019-03277-5 NA NA t3827.T002568 QTL_Ca3_21777546 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line Ca3_21777546 NA 0 0 0 0 3.17833535050875 10.1007/s00122-019-03277-5 NA NA t3827.T002569 QTL_Ca3_21777560 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line Ca3_21777560 NA 0 0 0 0 1.08088804367222 10.1007/s00122-019-03277-5 NA NA t3827.T002570 QTL_Ca3_21783183 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line Ca3_21783183 NA 0 0 0 0 4.78475308322898 10.1007/s00122-019-03277-5 NA NA t3827.T002571 QTL_Ca3_21806637 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line Ca3_21806637 NA 0 0 0 0 1.42670639705564 10.1007/s00122-019-03277-5 NA NA t3827.T002572 QTL_Ca3_22724462 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line Ca3_22724462 NA 0 0 0 0 1.35361691833136 10.1007/s00122-019-03277-5 NA NA t3827.T002573 QTL_Ca4_51015386 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line Ca4_51015386 NA 0 0 0 0 9.07218316664597 10.1007/s00122-019-03277-5 NA NA t3827.T002574 QTL_CaGM13632_Ca3_23246513 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line CaGM13632(Ca3:23246513) NA 0 0 0 0 8.93834289812194 10.1007/s00122-019-03277-5 NA NA t3827.T002575 QTL_CaGM13641_Ca3_23312509 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line CaGM13641(Ca3:23312509) NA 0 0 0 0 1.25090465798949 10.1007/s00122-019-03277-5 NA NA t3827.T002576 QTL_Scaffold8586_900 5 PRO_GH (protein concentration_greenhouse) GLM model RIL recombinant inbred line Scaffold8586_900 NA 0 0 0 0 4.3984459018852e 10.1007/s00122-019-03277-5 NA NA t3827.T002577 QTL_aha10_Ca3_23262576 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line aha10(Ca3:23262576) NA 0 0 0 0 5.20837239584118 10.1007/s00122-019-03277-5 NA NA t3827.T002578 QTL_AN3 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line AN3 NA 0 0 0 0 2.86885016716791 10.1007/s00122-019-03277-5 NA NA t3827.T002579 QTL_Ca1_333974 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line Ca1_333974 NA 0 0 0 0 1.05671823110541 10.1007/s00122-019-03277-5 NA NA t3827.T002580 QTL_Ca1_363821 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line Ca1_363821 NA 0 0 0 0 7.78050132991193 10.1007/s00122-019-03277-5 NA NA t3827.T002581 QTL_Ca3_18996437 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line Ca3_18996437 NA 0 0 0 0 9.87459022148438 10.1007/s00122-019-03277-5 NA NA t3827.T002582 QTL_Ca3_19821186 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line Ca3_19821186 NA 0 0 0 0 4.68884491756228 10.1007/s00122-019-03277-5 NA NA t3827.T002583 QTL_Ca3_19853745 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line Ca3_19853745 NA 0 0 0 0 2.38059814754947 10.1007/s00122-019-03277-5 NA NA t3827.T002584 QTL_Ca3_19853805 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line Ca3_19853805 NA 0 0 0 0 2.38059814754947 10.1007/s00122-019-03277-5 NA NA t3827.T002585 QTL_Ca3_19908491 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line Ca3_19908491 NA 0 0 0 0 1.10024239236087 10.1007/s00122-019-03277-5 NA NA t3827.T002586 QTL_Ca3_19908527 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line Ca3_19908527 NA 0 0 0 0 1.22959857113709 10.1007/s00122-019-03277-5 NA NA t3827.T002587 QTL_Ca3_19921595 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line Ca3_19921595 NA 0 0 0 0 6.11029014582149 10.1007/s00122-019-03277-5 NA NA t3827.T002588 QTL_Ca3_19921611 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line Ca3_19921611 NA 0 0 0 0 3.98461222036696 10.1007/s00122-019-03277-5 NA NA t3827.T002589 QTL_Ca3_20045543 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line Ca3_20045543 NA 0 0 0 0 6.23262578516518 10.1007/s00122-019-03277-5 NA NA t3827.T002590 QTL_Ca3_20122534 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line Ca3_20122534 NA 0 0 0 0 4.6261032930031e 10.1007/s00122-019-03277-5 NA NA t3827.T002591 QTL_Ca3_20177050 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line Ca3_20177050 NA 0 0 0 0 3.92862359286766 10.1007/s00122-019-03277-5 NA NA t3827.T002592 QTL_Ca3_20177055 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line Ca3_20177055 NA 0 0 0 0 6.63204122231278 10.1007/s00122-019-03277-5 NA NA t3827.T002593 QTL_Ca3_21283920 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line Ca3_21283920 NA 0 0 0 0 8.5127961412359e 10.1007/s00122-019-03277-5 NA NA t3827.T002594 QTL_Ca3_21283925 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line Ca3_21283925 NA 0 0 0 0 1.89725489410914 10.1007/s00122-019-03277-5 NA NA t3827.T002595 QTL_Ca3_21283949 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line Ca3_21283949 NA 0 0 0 0 3.15953735944414 10.1007/s00122-019-03277-5 NA NA t3827.T002596 QTL_Ca3_21706963 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line Ca3_21706963 NA 0 0 0 0 2.80683067102034 10.1007/s00122-019-03277-5 NA NA t3827.T002597 QTL_Ca3_21706964 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line Ca3_21706964 NA 0 0 0 0 2.80683067102034 10.1007/s00122-019-03277-5 NA NA t3827.T002598 QTL_Ca3_21758600 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line Ca3_21758600 NA 0 0 0 0 2.90103769288193 10.1007/s00122-019-03277-5 NA NA t3827.T002599 QTL_Ca3_21775854 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line Ca3_21775854 NA 0 0 0 0 3.36948619435498 10.1007/s00122-019-03277-5 NA NA t3827.T002600 QTL_Ca3_21777546 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line Ca3_21777546 NA 0 0 0 0 2.5819371832053e 10.1007/s00122-019-03277-5 NA NA t3827.T002601 QTL_Ca3_21777560 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line Ca3_21777560 NA 0 0 0 0 1.8565722538291e 10.1007/s00122-019-03277-5 NA NA t3827.T002602 QTL_Ca3_21783183 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line Ca3_21783183 NA 0 0 0 0 3.28790678521369 10.1007/s00122-019-03277-5 NA NA t3827.T002603 QTL_Ca3_21806637 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line Ca3_21806637 NA 0 0 0 0 1.28066250753689 10.1007/s00122-019-03277-5 NA NA t3827.T002604 QTL_Ca3_22724462 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line Ca3_22724462 NA 0 0 0 0 1.62667329522726 10.1007/s00122-019-03277-5 NA NA t3827.T002605 QTL_CaGM13632_Ca3_23246513 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line CaGM13632(Ca3:23246513) NA 0 0 0 0 5.20837239584118 10.1007/s00122-019-03277-5 NA NA t3827.T002606 QTL_CaGM13641_Ca3_23312509 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line CaGM13641(Ca3:23312509) NA 0 0 0 0 1.7145608312033e 10.1007/s00122-019-03277-5 NA NA t3827.T002607 QTL_Scaffold8586_900 5 PRO_ICR (protein concentration_ICRISAT) GLM model RIL recombinant inbred line Scaffold8586_900 NA 0 0 0 0 1.99878417531059 10.1007/s00122-019-03277-5 NA NA t3827.T002608 5 Seed protein content GWAS desi and 77 CakSNP2438 NA 2 9756955 0 0 0 2.1 × 10-8 10.3389/fpls.2016.00302 NA NA t3827.T002609 Ca05955 5 Seed protein content GWAS desi and 77 CakSNP9644 NA 6 3548121 0 0 0 2.5 × 10-9 10.3389/fpls.2016.00302 NA NA t3827.T002610 Ca06772 5 Seed protein content GWAS desi and 77 CakSNP12015 NA 7 5854598 0 0 0 1.5 × 10-8 10.3389/fpls.2016.00302 NA NA t3827.T002611 Ca08057 5 Seed protein content GWAS desi and 77 CakSNP881 NA 1 8112343 0 0 0 3.7 × 10-9 10.3389/fpls.2016.00302 NA NA t3827.T002612 Ca18632 5 Seed protein content GWAS desi and 77 CakSNP639 NA 4 17920616 0 0 0 3.3 × 10-9 10.3389/fpls.2016.00302 NA NA t3827.T002613 Ca19912 5 Seed protein content GWAS desi and 77 CakSNP12753 NA 7 24181321 0 0 0 1.2 × 10-9 10.3389/fpls.2016.00302 NA NA t3827.T002614 Ca20299 5 Seed protein content GWAS desi and 77 CakSNP1726 NA 1 27017765 0 0 0 1.7 × 10-8 10.3389/fpls.2016.00302 NA NA t3827.T002615 SNP_111382 5 Seed Weight mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 9 21896 0 0 0 0.414 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002616 SNP_114611 5 Seed Weight mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 9 384154 0 0 0 0.0198 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002617 SNP_116098 5 Seed Weight mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 9 171102 0 0 0 0.0145 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002618 SNP_12873 5 Seed Weight mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 1 43943035 0 0 0 0.00167 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002619 SNP_30291 5 Seed Weight mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 3 25459740 0 0 0 0.0179 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002620 SNP_34141 5 Seed Weight mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 3 34651958 0 0 0 0.00032095 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002621 SNP_39039 5 Seed Weight mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 4 4618898 0 0 0 0.00013332 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002622 SNP_3968 5 Seed Weight mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 1 8726539 0 0 0 0.203 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002623 SNP_54980 5 Seed Weight mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 5 7628401 0 0 0 0.00873 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002624 SNP_66806 5 Seed Weight mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 5 46975185 0 0 0 0.00029915 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002625 SNP_69339 5 Seed Weight mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 6 4804815 0 0 0 0.00543 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002626 SNP_85490 5 Seed Weight mixed linear model integrated population of 107 C. reticulatum genotypes and 73 C. arietinum genotypes accession NA 7 702516 0 0 0 5.4e-05 10.1016/j.ygeno.2018.12.010 NA NA t3827.T002627 CaqFe3.1 5 Seed_Fe composite interval mapping F2:3 population F2:3 SCA3_38112971 NA 0 0 SCA3_31331006 0 0 12.81 4.2 10.3389/fnut.2020.559120 NA NA t3827.T002628 CaqFe3.2 5 Seed_Fe composite interval mapping F2:3 population F2:3 SCA3_38103368 NA 0 0 SCA3_38060814 0 0 15.51 4.1 10.3389/fnut.2020.559120 NA NA t3827.T002629 CaqFe3.3 5 Seed_Fe composite interval mapping F2:3 population F2:3 SCA3_36227565 NA 0 0 SCA3_36549464 0 0 20.41 4.5 10.3389/fnut.2020.559120 NA NA t3827.T002630 CaqFe3.4 5 Seed_Fe composite interval mapping F2:3 population F2:3 SCA3_39612119 NA 0 0 SCA3_37949465 0 0 32.91 3 10.3389/fnut.2020.559120 NA NA t3827.T002631 CaqFe4.1 5 Seed_Fe composite interval mapping F2:3 population F2:3 SCA4_11398699 NA 0 0 SCA4_11244334 0 0 48.91 3.1 10.3389/fnut.2020.559120 NA NA t3827.T002632 CaqFe4.2 5 Seed_Fe composite interval mapping F2:3 population F2:3 SCA4_23943928 NA 0 0 SCA4_13840227 0 0 59.21 4.8 10.3389/fnut.2020.559120 NA NA t3827.T002633 CaqFe4.3 5 Seed_Fe composite interval mapping F2:3 population F2:3 SCA4_13787448 NA 0 0 SCA4_13845581 0 0 61.11 4 10.3389/fnut.2020.559120 NA NA t3827.T002634 CaqFe4.4 5 Seed_Fe composite interval mapping F2:3 population F2:3 SCA4_13724666 NA 0 0 SCA4_4477846 0 0 62.61 3.3 10.3389/fnut.2020.559120 NA NA t3827.T002635 CaqFe4.5 5 Seed_Fe composite interval mapping F2:3 population F2:3 SCA4_13840191 NA 0 0 SCA4_3223962 0 0 63.81 3.4 10.3389/fnut.2020.559120 NA NA t3827.T002636 CaqFe5.1 5 Seed_Fe composite interval mapping F2:3 population F2:3 SCA5_40736291 NA 0 0 SCA5_47154065 0 0 119.81 4.2 10.3389/fnut.2020.559120 NA NA t3827.T002637 CaqFe5.2 5 Seed_Fe composite interval mapping F2:3 population F2:3 SCA5_37174786 NA 0 0 SCA5_35312501 0 0 145.31 3 10.3389/fnut.2020.559120 NA NA t3827.T002638 CaqZn4.1 5 Seed_Zn composite interval mapping F2:3 population F2:3 SCA4_11398699 NA 0 0 SCA4_11244334 0 0 48.91 4.4 10.3389/fnut.2020.559120 NA NA t3827.T002639 CaqZn4.2 5 Seed_Zn composite interval mapping F2:3 population F2:3 SCA4_12558541 NA 0 0 SCA4_11441673 0 0 53.41 4.6 10.3389/fnut.2020.559120 NA NA t3827.T002640 CaqZn4.3 5 Seed_Zn composite interval mapping F2:3 population F2:3 SCA4_13660846 NA 0 0 SCA4_13787649 0 0 57.61 6.3 10.3389/fnut.2020.559120 NA NA t3827.T002641 CaqZn4.4 5 Seed_Zn composite interval mapping F2:3 population F2:3 SCA4_23943928 NA 0 0 SCA4_13840227 0 0 59.21 6 10.3389/fnut.2020.559120 NA NA t3827.T002642 CaqZn4.5 5 Seed_Zn composite interval mapping F2:3 population F2:3 SCA4_13787448 NA 0 0 SCA4_13845581 0 0 61.11 5.5 10.3389/fnut.2020.559120 NA NA t3827.T002643 CaqZn4.6 5 Seed_Zn composite interval mapping F2:3 population F2:3 SCA4_13840191 NA 0 0 SCA4_3223962 0 0 63.81 4.6 10.3389/fnut.2020.559120 NA NA t3827.T002644 CaqZn5.1 5 Seed_Zn composite interval mapping F2:3 population F2:3 SCA5_37174786 NA 0 0 SCA5_35312501 0 0 146.31 3.8 10.3389/fnut.2020.559120 NA NA t3827.T002645 CaqZn8.1 5 Seed_Zn composite interval mapping F2:3 population F2:3 SCA8_4106644 NA 0 0 SCA8_16027922 0 0 33.81 3.8 10.3389/fnut.2020.559120 NA NA t3827.T002646 qSS-ICR-1.1 5 SS (seed shape) general linear model (GLM)-based RIL recombinant inbred line Ca1:363821 NA 0 0 Ca1:1162304 0 0 3.8 10.1007/s00122-019-03277-5 NA NA t3827.T002647 qSS-ICR-3.2 5 SS (seed shape) general linear model (GLM)-based RIL recombinant inbred line Ca3:22724462 NA 0 0 CaGM13632 0 0 84.7 10.1007/s00122-019-03277-5 NA NA t3827.T002648 QTL_aha10_Ca3_23262576 5 SS_ICR (seed shape_ICRISAT) GLM model RIL recombinant inbred line aha10(Ca3:23262576) NA 0 0 0 0 9.9983143832251e 10.1007/s00122-019-03277-5 NA NA t3827.T002649 QTL_AN3 5 SS_ICR (seed shape_ICRISAT) GLM model RIL recombinant inbred line AN3 NA 0 0 0 0 6.08959772094239 10.1007/s00122-019-03277-5 NA NA t3827.T002650 QTL_Ca2_23863467 5 SS_ICR (seed shape_ICRISAT) GLM model RIL recombinant inbred line Ca2_23863467 NA 0 0 0 0 1.50182506334251 10.1007/s00122-019-03277-5 NA NA t3827.T002651 QTL_Ca2_24121667 5 SS_ICR (seed shape_ICRISAT) GLM model RIL recombinant inbred line Ca2_24121667 NA 0 0 0 0 3.94691836048391 10.1007/s00122-019-03277-5 NA NA t3827.T002652 QTL_Ca3_21283920 5 SS_ICR (seed shape_ICRISAT) GLM model RIL recombinant inbred line Ca3_21283920 NA 0 0 0 0 3.99371761975375 10.1007/s00122-019-03277-5 NA NA t3827.T002653 QTL_Ca3_21706963 5 SS_ICR (seed shape_ICRISAT) GLM model RIL recombinant inbred line Ca3_21706963 NA 0 0 0 0 3.02824876699611 10.1007/s00122-019-03277-5 NA NA t3827.T002654 QTL_Ca3_21706964 5 SS_ICR (seed shape_ICRISAT) GLM model RIL recombinant inbred line Ca3_21706964 NA 0 0 0 0 3.02824876699611 10.1007/s00122-019-03277-5 NA NA t3827.T002655 QTL_Ca3_21758600 5 SS_ICR (seed shape_ICRISAT) GLM model RIL recombinant inbred line Ca3_21758600 NA 0 0 0 0 8.00787943670904 10.1007/s00122-019-03277-5 NA NA t3827.T002656 QTL_Ca3_21775854 5 SS_ICR (seed shape_ICRISAT) GLM model RIL recombinant inbred line Ca3_21775854 NA 0 0 0 0 4.01191498782988 10.1007/s00122-019-03277-5 NA NA t3827.T002657 QTL_Ca3_21777546 5 SS_ICR (seed shape_ICRISAT) GLM model RIL recombinant inbred line Ca3_21777546 NA 0 0 0 0 2.45139405936093 10.1007/s00122-019-03277-5 NA NA t3827.T002658 QTL_Ca3_21777560 5 SS_ICR (seed shape_ICRISAT) GLM model RIL recombinant inbred line Ca3_21777560 NA 0 0 0 0 2.45139405936093 10.1007/s00122-019-03277-5 NA NA t3827.T002659 QTL_Ca3_21783183 5 SS_ICR (seed shape_ICRISAT) GLM model RIL recombinant inbred line Ca3_21783183 NA 0 0 0 0 4.20189859612424 10.1007/s00122-019-03277-5 NA NA t3827.T002660 QTL_Ca3_21806637 5 SS_ICR (seed shape_ICRISAT) GLM model RIL recombinant inbred line Ca3_21806637 NA 0 0 0 0 8.38890641554671 10.1007/s00122-019-03277-5 NA NA t3827.T002661 QTL_Ca3_22724462 5 SS_ICR (seed shape_ICRISAT) GLM model RIL recombinant inbred line Ca3_22724462 NA 0 0 0 0 1.32858107206895 10.1007/s00122-019-03277-5 NA NA t3827.T002662 QTL_Ca4_10889060 5 SS_ICR (seed shape_ICRISAT) GLM model RIL recombinant inbred line Ca4_10889060 NA 0 0 0 0 3.33556817090226 10.1007/s00122-019-03277-5 NA NA t3827.T002663 QTL_Ca5_10302503 5 SS_ICR (seed shape_ICRISAT) GLM model RIL recombinant inbred line Ca5_10302503 NA 0 0 0 0 1.0178068809192e 10.1007/s00122-019-03277-5 NA NA t3827.T002664 QTL_CaGM13632_Ca3_23246513 5 SS_ICR (seed shape_ICRISAT) GLM model RIL recombinant inbred line CaGM13632(Ca3:23246513) NA 0 0 0 0 9.9983143832251e 10.1007/s00122-019-03277-5 NA NA t3827.T002665 QTL_CaGM13641_Ca3_23312509 5 SS_ICR (seed shape_ICRISAT) GLM model RIL recombinant inbred line CaGM13641(Ca3:23312509) NA 0 0 0 0 2.41158208724556 10.1007/s00122-019-03277-5 NA NA t3827.T002666 QTL_Scaffold8586_900 5 SS_ICR (seed shape_ICRISAT) GLM model RIL recombinant inbred line Scaffold8586_900 NA 0 0 0 0 4.49686860898023 10.1007/s00122-019-03277-5 NA NA t3827.T002667 qSTA-1.1 5 STA (starch concentration) general linear model (GLM)-based RIL recombinant inbred line Ca1:363821 NA 0 0 Ca1:1162304 0 0 2.8 10.1007/s00122-019-03277-5 NA NA t3827.T002668 qSTA-3.2 5 STA (starch concentration) general linear model (GLM)-based RIL recombinant inbred line Ca3:22724462-CaGM13632 NA 0 0 0 0 86.7 10.1007/s00122-019-03277-5 NA NA t3827.T002669 qSTA-ABE-1.1 5 STA (starch concentration) general linear model (GLM)-based RIL recombinant inbred line Ca1:363821 NA 0 0 Ca1:1162304 0 0 1.8 10.1007/s00122-019-03277-5 NA NA t3827.T002670 qSTA-BIG-1.1 5 STA (starch concentration) general linear model (GLM)-based RIL recombinant inbred line Ca1:363821 NA 0 0 Ca1:1162304 0 0 1.8 10.1007/s00122-019-03277-5 NA NA t3827.T002671 qSTA-GH-1.1 5 STA (starch concentration) general linear model (GLM)-based RIL recombinant inbred line Ca1:363821 NA 0 0 Ca1:1162304 0 0 3.8 10.1007/s00122-019-03277-5 NA NA t3827.T002672 qSTA-GH-3.2 5 STA (starch concentration) general linear model (GLM)-based RIL recombinant inbred line Ca3:22724462 NA 0 0 CaGM13632 0 0 86.7 10.1007/s00122-019-03277-5 NA NA t3827.T002673 qSTA-ICR-1.1 5 STA (starch concentration) general linear model (GLM)-based RIL recombinant inbred line Ca1:363821 NA 0 0 Ca1:1162304 0 0 4.8 10.1007/s00122-019-03277-5 NA NA t3827.T002674 QTL_Ca1_1162304 5 STA_ABE (starch concentration_Aberdeen) GLM model RIL recombinant inbred line Ca1_1162304 NA 0 0 0 0 4.93604788253508 10.1007/s00122-019-03277-5 NA NA t3827.T002675 QTL_Ca1_333974 5 STA_ABE (starch concentration_Aberdeen) GLM model RIL recombinant inbred line Ca1_333974 NA 0 0 0 0 6.49968834656895 10.1007/s00122-019-03277-5 NA NA t3827.T002676 QTL_Ca1_363821 5 STA_ABE (starch concentration_Aberdeen) GLM model RIL recombinant inbred line Ca1_363821 NA 0 0 0 0 1.88230269205009 10.1007/s00122-019-03277-5 NA NA t3827.T002677 QTL_Ca1_333974 5 STA_BIG (starch concentration_Biggar) GLM model RIL recombinant inbred line Ca1_333974 NA 0 0 0 0 1.89799341469803 10.1007/s00122-019-03277-5 NA NA t3827.T002678 QTL_Ca1_363821 5 STA_BIG (starch concentration_Biggar) GLM model RIL recombinant inbred line Ca1_363821 NA 0 0 0 0 1.02932307795006 10.1007/s00122-019-03277-5 NA NA t3827.T002679 QTL_aha10_Ca3_23262576 5 STA_GH (starch concentration_greenhouse) GLM model RIL recombinant inbred line aha10(Ca3:23262576) NA 0 0 0 0 3.23506089303479 10.1007/s00122-019-03277-5 NA NA t3827.T002680 QTL_Ca1_1162304 5 STA_GH (starch concentration_greenhouse) GLM model RIL recombinant inbred line Ca1_1162304 NA 0 0 0 0 3.1990640676483e 10.1007/s00122-019-03277-5 NA NA t3827.T002681 QTL_Ca1_333974 5 STA_GH (starch concentration_greenhouse) GLM model RIL recombinant inbred line Ca1_333974 NA 0 0 0 0 9.8165425820046e 10.1007/s00122-019-03277-5 NA NA t3827.T002682 QTL_Ca1_363821 5 STA_GH (starch concentration_greenhouse) GLM model RIL recombinant inbred line Ca1_363821 NA 0 0 0 0 1.36055188772543 10.1007/s00122-019-03277-5 NA NA t3827.T002683 QTL_CaGM13632_Ca3_23246513 5 STA_GH (starch concentration_greenhouse) GLM model RIL recombinant inbred line CaGM13632(Ca3:23246513) NA 0 0 0 0 3.23506089303479 10.1007/s00122-019-03277-5 NA NA t3827.T002684 QTL_CaGM13641_Ca3_23312509 5 STA_GH (starch concentration_greenhouse) GLM model RIL recombinant inbred line CaGM13641(Ca3:23312509) NA 0 0 0 0 1.70567794474784 10.1007/s00122-019-03277-5 NA NA t3827.T002685 QTL_Ca1_1162304 5 STA_ICR (starch concentration_ICRISAT) GLM model RIL recombinant inbred line Ca1_1162304 NA 0 0 0 0 4.16312588558091 10.1007/s00122-019-03277-5 NA NA t3827.T002686 QTL_Ca1_333974 5 STA_ICR (starch concentration_ICRISAT) GLM model RIL recombinant inbred line Ca1_333974 NA 0 0 0 0 3.97131620963561 10.1007/s00122-019-03277-5 NA NA t3827.T002687 QTL_Ca1_363821 5 STA_ICR (starch concentration_ICRISAT) GLM model RIL recombinant inbred line Ca1_363821 NA 0 0 0 0 1.15224222737609 10.1007/s00122-019-03277-5 NA NA t3827.T002688 QTL_Ca4_6590210 5 STA_ICR (starch concentration_ICRISAT) GLM model RIL recombinant inbred line Ca4_6590210 NA 0 0 0 0 2.26026755478489 10.1007/s00122-019-03277-5 NA NA t3827.T002689 q-Tot-8-CJ 5 Total carotenoid component inclusive composite interval map CJ F2 AX-123637792 NA 0 0 CotCol; AX-123642869 0 0 101 8.2 10.3835/plantgenome2019.07.0067 NA NA t3827.T002690 q-Tot-8-IJ 5 Total carotenoid component inclusive composite interval map IJ F2 AX-123637737 NA 0 0 CotCol; AX-123642855 0 0 30 6.3 10.3835/plantgenome2019.07.0067 NA NA t3827.T002691 q-Tot-8-JF 5 Total carotenoid component inclusive composite interval map JF F2 AX-123657409 NA 0 0 AX-123642874; AX-123657408 0 0 168 4 10.3835/plantgenome2019.07.0067 NA NA t3827.T002692 q-Vio-8-CJ 5 Violaxanthin inclusive composite interval map CJ F2 AX-123637792 NA 0 0 CotCol; AX-123642869 0 0 101 9.2 10.3835/plantgenome2019.07.0067 NA NA t3827.T002693 q-Vio-8-JF 5 Violazanthin inclusive composite interval map JF F2 AX-123657409 NA 0 0 CotCol; AX-123637790 0 0 180 11.8 10.3835/plantgenome2019.07.0067 NA NA t3827.T002694 q-Zea-1-JF 5 Zeaxanthin inclusive composite interval map JF F2 AX-123644659 NA 0 0 AX-123618241; AX-123618287 0 0 325 4 10.3835/plantgenome2019.07.0067 NA NA t3827.T002695 q-Zea-5-JF 5 Zeaxanthin inclusive composite interval map JF F2 AX-123632228 NA 0 0 AX-123640067; AX-123662533 0 0 367 5.8 10.3835/plantgenome2019.07.0067 NA NA t3827.T002696 5 Zinc Association mapping 94 desi and kabuli accessions Cav1sc19.1p1556596 NA Chr 1 3029714 0 0 0 3.18 10.1139/gen-2014-0108 NA NA t3827.T002697 5 Zinc Association mapping 94 desi and kabuli accessions Cav1sc25.1p2052607 NA Chr 4 446808 0 0 0 3.14 10.1139/gen-2014-0108 NA NA t3827.T002698 5 Zinc Association mapping 94 desi and kabuli accessions Cav1sc25.1p1987616 NA Chr 4 4534886 0 0 0 3.14 10.1139/gen-2014-0108 NA NA t3827.T002699 5 Zinc Association mapping 94 desi and kabuli accessions Cav1sc25.1p1947783 NA Chr 4 4574689 0 0 0 3.14 10.1139/gen-2014-0108 NA NA t3827.T002700 5 Zinc Association mapping 94 desi and kabuli accessions Cav1sc22.1p552905 NA Chr 7 332254 0 0 0 3.57 10.1139/gen-2014-0108 NA NA t3827.T002701 qAB2.1 6 ascochyta blight resistance inclusive composite interval map CPR-02 RILs recombinant inbred line in F8 generation Ca2-ABA-R NA Ca2 14258590 0 Cav1sc520.1p50440 Ca2 17335867 0 56 4.5 10.1007/s00122-019-03322-3 NA NA t3827.T002702 qAB2.2 6 ascochyta blight resistance inclusive composite interval map CPR-02 RILs recombinant inbred line in F8 generation Cav1sc246.1p121732 NA Ca2 18250331 0 Cav1sc689.1p195825 Ca2 19241634 0 83.5 4.2 10.1007/s00122-019-03322-3 NA NA t3827.T002703 qAB2.3 6 ascochyta blight resistance inclusive composite interval map CPR-02 RILs recombinant inbred line in F8 generation Ca2-GDSL2 NA Ca2 20675628 0 Ca2-PEI Ca2 20836067 0 99 3.2 10.1007/s00122-019-03322-3 NA NA t3827.T002704 qAB3.1 6 ascochyta blight resistance inclusive composite interval map CPR-02 RILs recombinant inbred line in F8 generation SCA3_15444471 NA Ca3 15444471 0 SCA3_21346384 Ca3 21346384 0 1 3.1 10.1007/s00122-019-03322-3 NA NA t3827.T002705 qAB3.1 6 ascochyta blight resistance inclusive composite interval map CPR-02 RILs recombinant inbred line in F8 generation SCA3_15444471 NA Ca3 15444471 0 SCA3_21346384 Ca3 21346384 0 1 4 10.1007/s00122-019-03322-3 NA NA t3827.T002706 qAB4.1 6 ascochyta blight resistance inclusive composite interval map CPR-02 RILs recombinant inbred line in F8 generation SCA4_6022188 NA Ca4 6022188 0 SCA4_8584363 Ca4 8584363 0 34.5 3.2 10.1007/s00122-019-03322-3 NA NA t3827.T002707 qAB4.1 6 ascochyta blight resistance inclusive composite interval map CPR-02 RILs recombinant inbred line in F8 generation SCA4_6022188 NA Ca4 6022188 0 SCA4_8584363 Ca4 8584363 0 34.5 6.5 10.1007/s00122-019-03322-3 NA NA t3827.T002708 qAB4.2 6 ascochyta blight resistance inclusive composite interval map CPR-02 RILs recombinant inbred line in F8 generation SCA4_21540251 NA Ca4 21540251 0 Ca4-ER2 Ca4 26669759 0 87 6.1 10.1007/s00122-019-03322-3 NA NA t3827.T002709 qAB4.2 6 ascochyta blight resistance inclusive composite interval map CPR-02 RILs recombinant inbred line in F8 generation SCA4_21540251 NA Ca4 21540251 0 Ca4-ER2 Ca4 26669759 0 87 6.8 10.1007/s00122-019-03322-3 NA NA t3827.T002710 qAB5.1 6 ascochyta blight resistance inclusive composite interval map CPR-02 RILs recombinant inbred line in F8 generation SCA5_20906121 NA Ca5 20906121 0 Ca5-BTB Ca5 21049846 0 49.5 19 10.1007/s00122-019-03322-3 NA NA t3827.T002711 qAB5.1 6 ascochyta blight resistance inclusive composite interval map CPR-02 RILs recombinant inbred line in F8 generation SCA5_20906121 NA Ca5 20906121 0 Ca5-BTB Ca5 21049846 0 49.5 3.9 10.1007/s00122-019-03322-3 NA NA t3827.T002712 qAB6.1 6 ascochyta blight resistance inclusive composite interval map CPR-02 RILs recombinant inbred line in F8 generation SCA6_54348174 NA Ca6 43994721 0 Cav1sc30.1p60427 Ca6 54348174 0 82 4.1 10.1007/s00122-019-03322-3 NA NA t3827.T002713 qDrvl04 6 Damage rating at vegetative stage (DRV_L) Interval mapping inter-specific RIL mapping population inter-specific recombinant inbred line Ca4_12952156 NA 0 0 Ca4_12952156; Ca4_37364166 0 0 93 6.31 10.1002/tpg2.20071 NA NA t3827.T002714 qDrfl04 6 Damge rating at flowering stage (DRF_L) Interval mapping inter-specific RIL mapping population inter-specific recombinant inbred line Ca4_17064735 NA 0 0 Ca4_9847572; Ca4_37364166 0 0 94 3 10.1002/tpg2.20071 NA NA t3827.T002715 qD50f03 6 Days to 50% flowering (D50F) Interval mapping inter-specific RIL mapping population inter-specific recombinant inbred line Ca3_26878028 NA 0 0 Ca3_25230187; Ca3_27556951 0 0 15.29 10.52 10.1002/tpg2.20071 NA NA t3827.T002716 qD50f07 6 Days to 50% flowering (D50F) Interval mapping inter-specific RIL mapping population inter-specific recombinant inbred line Ca7_9011339 NA 0 0 Ca7_9011339; Ca7_4203236 0 0 0 3.29 10.1002/tpg2.20071 NA NA t3827.T002717 qDf03 6 Days to first flowering (DFF) Interval mapping inter-specific RIL mapping population inter-specific recombinant inbred line Ca3_26878028 NA 0 0 Ca3_25230187; Ca3_27556951 0 0 15.29 10.81 10.1002/tpg2.20071 NA NA t3827.T002718 qDf07 6 Days to first flowering (DFF) Interval mapping inter-specific RIL mapping population inter-specific recombinant inbred line Ca7_9011339 NA 0 0 Ca7_9011339; Ca7_4203236 0 0 0 3.42 10.1002/tpg2.20071 NA NA t3827.T002719 qLpp03 6 Larvae per 10 plants (LPP) Interval mapping inter-specific RIL mapping population inter-specific recombinant inbred line Ca3_25961542 NA 0 0 Ca3_24150445; Ca3_27575961 0 0 11.29 4.89 10.1002/tpg2.20071 NA NA t3827.T002720 6 LeasyScan- 3D-Leaf area (mm²); 3DLA Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002721 6 LeasyScan- 3D-Leaf area growth rate (mm2 day-1); 3DLAGR Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002722 6 LeasyScan- Delta carbon ratio; ∆13C Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002723 6 LeasyScan- Digital biomass (mm3); DBM Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002724 6 LeasyScan- Digital biomass growth rate (mm3 day-1); DBMGR Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002725 6 LeasyScan- Leaf area index; LAI Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002726 6 LeasyScan- Projected leaf area (mm²); PLA Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002727 6 LeasyScan- Shoot dry weight (g); SDW Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002728 6 LeasyScan- Specific leaf area (mm2 g-1); SLA Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002729 6 LeasyScan- Specific leaf weight (g mm-2); SLW Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002730 QRBprrsi01 6 Phytophthora root rot resistance Multiple-environment QTL analysi RB population interspecific F6-derived recombinant inbred line RB-SNP3-165 NA 3 34523347 0 RB-SNP3-160 3 34911684 0 78.03–79.67 7.878 1.71e-09 10.1007/s00122-018-3256-6 NA NA t3827.T002731 QRBprrsi01 6 Phytophthora root rot resistance Multiple-environment QTL analysi RB population interspecific F6-derived recombinant inbred line RB-SNP3-165 NA 3 34523347 0 RB-SNP3-160 3 34911684 0 78.03–79.67 7.878 1.71e-09 10.1007/s00122-018-3256-6 NA NA t3827.T002732 QRBprrsi01 6 Phytophthora root rot resistance Multiple-environment QTL analysi RB population interspecific F6-derived recombinant inbred line RB-SNP3-165 NA 3 34523347 0 RB-SNP3-160 3 34911684 0 78.03–79.67 7.878 1.71e-09 10.1007/s00122-018-3256-6 NA NA t3827.T002733 QRBprrsi02 6 Phytophthora root rot resistance Multiple-environment QTL analysi RB population interspecific F6-derived recombinant inbred line RB-SNP-131 NA 4 15542584 0 RB-SNP4-475 4 15752261 0 88.86–89.91 5.533 4.47e-07 10.1007/s00122-018-3256-6 NA NA t3827.T002734 QRBprrsi02 6 Phytophthora root rot resistance Multiple-environment QTL analysi RB population interspecific F6-derived recombinant inbred line RB-SNP-131 NA 4 15542584 0 RB-SNP4-475 4 15752261 0 88.86–89.91 5.533 4.47e-07 10.1007/s00122-018-3256-6 NA NA t3827.T002735 QRBprrsi02 6 Phytophthora root rot resistance Multiple-environment QTL analysi RB population interspecific F6-derived recombinant inbred line RB-SNP-131 NA 4 15542584 0 RB-SNP4-475 4 15752261 0 88.86–89.91 5.533 4.47e-07 10.1007/s00122-018-3256-6 NA NA t3827.T002736 QRBprrsi03 6 Phytophthora root rot resistance Multiple-environment QTL analysi RB population interspecific F6-derived recombinant inbred line RB-SNP-scf221 NA Scaffold 72201 0 RB-SNP8-76 8 15860254 0 53.40–61.15 2.424 0.000835 10.1007/s00122-018-3256-6 NA NA t3827.T002737 QRBprrsi03 6 Phytophthora root rot resistance Multiple-environment QTL analysi RB population interspecific F6-derived recombinant inbred line RB-SNP-scf221 NA Scaffold 72201 0 RB-SNP8-76 8 15860254 0 53.40–61.15 2.424 0.000835 10.1007/s00122-018-3256-6 NA NA t3827.T002738 QRBprrsi03 6 Phytophthora root rot resistance Multiple-environment QTL analysi RB population interspecific F6-derived recombinant inbred line RB-SNP-scf221 NA Scaffold 72201 0 RB-SNP8-76 8 15860254 0 53.40–61.15 2.424 0.000835 10.1007/s00122-018-3256-6 NA NA t3827.T002739 QRBprrsi04 6 Phytophthora root rot resistance Multiple-environment QTL analysi RB population interspecific F6-derived recombinant inbred line RB-SNP-scf117 NA 6 33493429 0 RB-SNP-scf61 Scaffold 244686 0 87.46–88.33 20.053 0 10.1007/s00122-018-3256-6 NA NA t3827.T002740 QRBprrsi04 6 Phytophthora root rot resistance Multiple-environment QTL analysi RB population interspecific F6-derived recombinant inbred line RB-SNP-scf117 NA 6 33493429 0 RB-SNP-scf61 Scaffold 244686 0 87.46–88.33 25.615 0 10.1007/s00122-018-3256-6 NA NA t3827.T002741 QRBprrsi04 6 Phytophthora root rot resistance Multiple-environment QTL analysi RB population interspecific F6-derived recombinant inbred line RB-SNP-scf117 NA 6 33493429 0 RB-SNP-scf61 Scaffold 244686 0 87.46–88.33 6.426 5.33e-08 10.1007/s00122-018-3256-6 NA NA t3827.T002742 QTL_on_Chr3 6 Phytophthora root rot resistance single-environment QTL analysis RB population interspecific F6-derived recombinant inbred line RB-SNP-scf33 NA 3 0 0 RB-SNP3-4 0 0 0.00–2.28 3.038 10.1007/s00122-018-3256-6 NA NA t3827.T002743 QTL_on_Chr3 6 Phytophthora root rot resistance single-environment QTL analysis RB population interspecific F6-derived recombinant inbred line RB-SNP3-67 NA 3 0 0 RB-SNP3-69 0 0 68.55–69.98 10.24 10.1007/s00122-018-3256-6 NA NA t3827.T002744 QTL_on_Chr3 6 Phytophthora root rot resistance single-environment QTL analysis RB population interspecific F6-derived recombinant inbred line RB-SNP3-165 NA 3 0 0 RB-SNP3-160 0 0 78.03–79.67 9.551 10.1007/s00122-018-3256-6 NA NA t3827.T002745 QTL_on_Chr3 6 Phytophthora root rot resistance single-environment QTL analysis YB population interspecific F6-derived recombinant inbred line 9024SNP3-4 NA 3 0 0 9024SNP3-189 0 0 112.50–123.20 3.955 10.1007/s00122-018-3256-6 NA NA t3827.T002746 QTL_on_Chr3 6 Phytophthora root rot resistance single-environment QTL analysis YB population interspecific F6-derived recombinant inbred line 9024SNP3-4 NA 3 0 0 9024SNP3-189 0 0 112.50–123.20 5.191 10.1007/s00122-018-3256-6 NA NA t3827.T002747 QTL_on_Chr3 6 Phytophthora root rot resistance single-environment QTL analysis YG population intra-specific F6-derived recombinant inbred line 9001SNP3-8 NA 3 0 0 9001SNP3-9 0 0 83.30–90.05 2.394 10.1007/s00122-018-3256-6 NA NA t3827.T002748 QTL_on_Chr4 6 Phytophthora root rot resistance single-environment QTL analysis RB population interspecific F6-derived recombinant inbred line RB-SNP-scf69 NA 4 0 0 RB-SNP4-506 0 0 126.37–128.8 2.151 10.1007/s00122-018-3256-6 NA NA t3827.T002749 QTL_on_Chr4 6 Phytophthora root rot resistance single-environment QTL analysis RB population interspecific F6-derived recombinant inbred line RB-SNP4-140 NA 4 0 0 RB-SNP4-36 0 0 28.84–39.62 2.175 10.1007/s00122-018-3256-6 NA NA t3827.T002750 QTL_on_Chr4 6 Phytophthora root rot resistance single-environment QTL analysis RB population interspecific F6-derived recombinant inbred line RB-SNP-79 NA 4 0 0 RB-SNP-72 0 0 80.53–81.70 4.4 10.1007/s00122-018-3256-6 NA NA t3827.T002751 QTL_on_Chr4 6 Phytophthora root rot resistance single-environment QTL analysis RB population interspecific F6-derived recombinant inbred line RB-SNP-131 NA 4 0 0 RB-SNP4-475 0 0 88.86–89.91 11.043 10.1007/s00122-018-3256-6 NA NA t3827.T002752 QTL_on_Chr4 6 Phytophthora root rot resistance single-environment QTL analysis RB population interspecific F6-derived recombinant inbred line RB-SNP-114 NA 4 0 0 RB-SNP-12 0 0 92.46–93.99 18.698 10.1007/s00122-018-3256-6 NA NA t3827.T002753 QTL_on_Chr4 6 Phytophthora root rot resistance single-environment QTL analysis YG population intra-specific F6-derived recombinant inbred line 9001SD4-2 NA 4 0 0 9001SNP4-1 0 0 0.00–1.06 3.187 10.1007/s00122-018-3256-6 NA NA t3827.T002754 QTL_on_Chr4 6 Phytophthora root rot resistance single-environment QTL analysis YG population intra-specific F6-derived recombinant inbred line 9001SD4-74 NA 4 0 0 9001SD4-75 0 0 109.05–118.25 3.828 10.1007/s00122-018-3256-6 NA NA t3827.T002755 QTL_on_Chr4 6 Phytophthora root rot resistance single-environment QTL analysis YG population intra-specific F6-derived recombinant inbred line 9001SD4-21 NA 4 0 0 9001SNP4-13 0 0 12.51–20.44 4.025 10.1007/s00122-018-3256-6 NA NA t3827.T002756 QTL_on_Chr4 6 Phytophthora root rot resistance single-environment QTL analysis YG population intra-specific F6-derived recombinant inbred line 9001SD4-58 NA 4 0 0 9001SD4-56 0 0 88.57–90.15 2.172 10.1007/s00122-018-3256-6 NA NA t3827.T002757 QTL_on_Chr5 6 Phytophthora root rot resistance single-environment QTL analysis RB population interspecific F6-derived recombinant inbred line RB-SNP5-3 NA 5 0 0 RB-SNP-173 0 0 85.85–106.10 4.146 10.1007/s00122-018-3256-6 NA NA t3827.T002758 QTL_on_Chr5 6 Phytophthora root rot resistance single-environment QTL analysis RB population interspecific F6-derived recombinant inbred line RB-SNP5-3 NA 5 0 0 RB-SNP-173 0 0 85.85–106.10 6.045 10.1007/s00122-018-3256-6 NA NA t3827.T002759 QTL_on_Chr5 6 Phytophthora root rot resistance single-environment QTL analysis YG population intra-specific F6-derived recombinant inbred line 9001SNP5-15 NA 5 0 0 9001SNP6-6 0 0 85.79–99.48 2.559 10.1007/s00122-018-3256-6 NA NA t3827.T002760 QTL_on_Chr6 6 Phytophthora root rot resistance single-environment QTL analysis RB population interspecific F6-derived recombinant inbred line RB-SNP6-377 NA 6 0 0 RB-SNP-16 0 0 104.22–105.17 4.595 10.1007/s00122-018-3256-6 NA NA t3827.T002761 QTL_on_Chr6 6 Phytophthora root rot resistance single-environment QTL analysis RB population interspecific F6-derived recombinant inbred line RB-SNP6-335 NA 6 0 0 RB-SNP6-46 0 0 124.58–25.44 4.267 10.1007/s00122-018-3256-6 NA NA t3827.T002762 QTL_on_Chr6 6 Phytophthora root rot resistance single-environment QTL analysis RB population interspecific F6-derived recombinant inbred line RB-SNP6-211 NA 6 0 0 RB-SNP-scf117 0 0 86.04–87.46 14.931 10.1007/s00122-018-3256-6 NA NA t3827.T002763 QTL_on_Chr6 6 Phytophthora root rot resistance single-environment QTL analysis RB population interspecific F6-derived recombinant inbred line RB-SNP-scf117 NA 6 0 0 RB-SNP-scf61 0 0 87.46–88.33 11.772 10.1007/s00122-018-3256-6 NA NA t3827.T002764 QTL_on_Chr6 6 Phytophthora root rot resistance single-environment QTL analysis YB population interspecific F6-derived recombinant inbred line 9024SNP6-127 NA 6 0 0 9024SNP6-146 0 0 106.95–108.11 5.355 10.1007/s00122-018-3256-6 NA NA t3827.T002765 QTL_on_Chr6 6 Phytophthora root rot resistance single-environment QTL analysis YB population interspecific F6-derived recombinant inbred line 9024SNP6-146 NA 6 0 0 9024SNP6-150 0 0 108.11–109.16 8.808 10.1007/s00122-018-3256-6 NA NA t3827.T002766 QTL_on_Chr6 6 Phytophthora root rot resistance single-environment QTL analysis YG population intra-specific F6-derived recombinant inbred line 9001SD6-30 NA 6 0 0 9001SD6-44 0 0 70.94–76.40 5.415 10.1007/s00122-018-3256-6 NA NA t3827.T002767 QTL_on_Chr8 6 Phytophthora root rot resistance single-environment QTL analysis RB population interspecific F6-derived recombinant inbred line RB-SNP8-36 NA 8 0 0 RB-SNP-136 0 0 10.85–12.57 3.402 10.1007/s00122-018-3256-6 NA NA t3827.T002768 QTL_on_Chr8 6 Phytophthora root rot resistance single-environment QTL analysis RB population interspecific F6-derived recombinant inbred line RB-SNP-162 NA 8 0 0 RB-SNP8-144 0 0 34.89–36.16 4.293 10.1007/s00122-018-3256-6 NA NA t3827.T002769 QTL_on_Chr8 6 Phytophthora root rot resistance single-environment QTL analysis RB population interspecific F6-derived recombinant inbred line RB-SNP-scf221 NA 8 0 0 RB-SNP8-76 0 0 53.40–61.15 3.401 10.1007/s00122-018-3256-6 NA NA t3827.T002770 QYBprrsi01 6 Phytophthora root rot resistance Multiple-environment QTL analysi YB population interspecific F6-derived recombinant inbred line 9024SNP3-1 NA 3 34439325 0 9024-SNP-108 3 34718938 0 97.67–98.90 2.092 0.00191 10.1007/s00122-018-3256-6 NA NA t3827.T002771 QYBprrsi01 6 Phytophthora root rot resistance Multiple-environment QTL analysi YB population interspecific F6-derived recombinant inbred line 9024SNP3-1 NA 3 34439325 0 9024-SNP-108 3 34718938 0 97.67–98.90 5.305 7.71e-07 10.1007/s00122-018-3256-6 NA NA t3827.T002772 QYBprrsi02 6 Phytophthora root rot resistance Multiple-environment QTL analysi YB population interspecific F6-derived recombinant inbred line 9024SNP6-240 NA 6 30089649 0 9024SNP6-429 6 31011058 0 126.48–127.39 10.309 5.57e-12 10.1007/s00122-018-3256-6 NA NA t3827.T002773 QYBprrsi02 6 Phytophthora root rot resistance Multiple-environment QTL analysi YB population interspecific F6-derived recombinant inbred line 9024SNP6-240 NA 6 30089649 0 9024SNP6-429 6 31011058 0 126.48–127.39 4.857 2.25e-06 10.1007/s00122-018-3256-6 NA NA t3827.T002774 QYGprrsi01 6 Phytophthora root rot resistance Multiple-environment QTL analysi YG population intra-specific F6-derived recombinant inbred line 9001SNP4-42 NA 4 35233539 0 9001SNP4-43 4 36456096 0 92.87–93.44 3.681 3.83e-05 10.1007/s00122-018-3256-6 NA NA t3827.T002775 QYGprrsi01 6 Phytophthora root rot resistance Multiple-environment QTL analysi YG population intra-specific F6-derived recombinant inbred line 9001SNP4-42 NA 4 35233539 0 9001SNP4-43 4 36456096 0 92.87–93.44 3.681 3.83e-05 10.1007/s00122-018-3256-6 NA NA t3827.T002776 QYGprrsi01 6 Phytophthora root rot resistance Multiple-environment QTL analysi YG population intra-specific F6-derived recombinant inbred line 9001SNP4-42 NA 4 35233539 0 9001SNP4-43 4 36456096 0 92.87–93.44 3.681 3.83e-05 10.1007/s00122-018-3256-6 NA NA t3827.T002777 QYGprrsi02 6 Phytophthora root rot resistance Multiple-environment QTL analysi YG population intra-specific F6-derived recombinant inbred line 9001SNP5-19 NA 5 38106599 0 9001SNP5-15 5 46569019 0 76.95–85.79 2.599 0.000542 10.1007/s00122-018-3256-6 NA NA t3827.T002778 QYGprrsi02 6 Phytophthora root rot resistance Multiple-environment QTL analysi YG population intra-specific F6-derived recombinant inbred line 9001SNP5-19 NA 5 38106599 0 9001SNP5-15 5 46569019 0 76.95–85.79 2.599 0.000542 10.1007/s00122-018-3256-6 NA NA t3827.T002779 QYGprrsi02 6 Phytophthora root rot resistance Multiple-environment QTL analysi YG population intra-specific F6-derived recombinant inbred line 9001SNP5-19 NA 5 38106599 0 9001SNP5-15 5 46569019 0 76.95–85.79 2.599 0.000542 10.1007/s00122-018-3256-6 NA NA t3827.T002780 QYGprrsi03 6 Phytophthora root rot resistance Multiple-environment QTL analysi YG population intra-specific F6-derived recombinant inbred line 9001SD6-30 NA 6 17366266 0 9001SD6-44 6 18853960 0 70.94–76.40 1.843 0.003579 10.1007/s00122-018-3256-6 NA NA t3827.T002781 QYGprrsi03 6 Phytophthora root rot resistance Multiple-environment QTL analysi YG population intra-specific F6-derived recombinant inbred line 9001SD6-30 NA 6 17366266 0 9001SD6-44 6 18853960 0 70.94–76.40 1.843 0.003579 10.1007/s00122-018-3256-6 NA NA t3827.T002782 QYGprrsi03 6 Phytophthora root rot resistance Multiple-environment QTL analysi YG population intra-specific F6-derived recombinant inbred line 9001SD6-30 NA 6 17366266 0 9001SD6-44 6 18853960 0 70.94–76.40 1.843 0.003579 10.1007/s00122-018-3256-6 NA NA t3827.T002783 6 Pot culture- Anthesis water use (g); WU_REP Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002784 6 Pot culture- Cumulative water use (g); CWU Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002785 6 Pot culture- Post-anthesis water use (g); WU_PF Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002786 6 Pot culture- Pre-anthesis water use (g); WU_VEG Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002787 6 Pot culture- Root fresh weight_Pod-filling stage (g); RFW_PF Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002788 6 Pot culture- Root fresh weight_Reproductive stage (g); RFW_R Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002789 6 Pot culture- Shoot fresh weight_Pod-filling stage (g); SFW_PF Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002790 6 Pot culture- Shoot fresh weight_Reproductive stage (g); SFW_R Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002791 6 Pot culture- Total fresh weight_Pod-filling stage (g); TFW_PF Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002792 6 Pot culture- Total fresh weight_Reproductive stage (g); TFW_R Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002793 6 Pot culture- Transpiration efficiency; TE Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002794 6 Pot culture- Water use-32DAS (g); WU-32DAS Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002795 6 Pot culture- Water use-35DAS (g); WU-35DAS Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002796 6 Pot culture- Water use-38DAS (g); WU-38DAS Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002797 6 Pot culture- Water use-41DAS (g); WU-41DAS Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002798 6 Pot culture- Water use-44DAS (g); WU-44DAS Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002799 6 Pot culture- Water use-50DAS (g); WU-50DAS Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002800 6 Pot culture- Water use-56DAS (g); WU-56DAS Marker-Assisted Backcrossing (MA Introgression lines BC3F3 NA 0 0 0 0 10.1093/jxb/erac348 NA NA t3827.T002801 CPR01-qAB1.1 6 resistance to ascochyta blight NGS-based BSA analysis CPR-01 recombinant inbred line in F10 generation NA Ca1 1999318 0 Ca1 5345307 0 4.81e-07 10.1111/pbi.12964 NA NA t3827.T002802 CPR01-qAB1.2 6 resistance to ascochyta blight NGS-based BSA analysis CPR-01 recombinant inbred line in F10 generation NA Ca1 10611232 0 Ca1 12383822 0 8.91e-07 10.1111/pbi.12964 NA NA t3827.T002803 CPR01-qAB1.3 6 resistance to ascochyta blight NGS-based BSA analysis CPR-01 recombinant inbred line in F10 generation NA Ca1 30179115 0 Ca1 31355738 0 7.57e-05 10.1111/pbi.12964 NA NA t3827.T002804 CPR01-qAB1.4 6 resistance to ascochyta blight NGS-based BSA analysis CPR-01 recombinant inbred line in F10 generation NA Ca1 33954240 0 Ca1 36806552 0 1.35e-05 10.1111/pbi.12964 NA NA t3827.T002805 CPR01-qAB4.1 6 resistance to ascochyta blight NGS-based BSA analysis CPR-01 recombinant inbred line in F10 generation NA Ca4 1705617 0 Ca4 8927881 0 1.73e-07 10.1111/pbi.12964 NA NA t3827.T002806 CPR01-qAB4.2 6 resistance to ascochyta blight NGS-based BSA analysis CPR-01 recombinant inbred line in F10 generation NA Ca4 12218355 0 Ca4 13965172 0 1.38e-05 10.1111/pbi.12964 NA NA t3827.T002807 CPR01-qAB4.3 6 resistance to ascochyta blight NGS-based BSA analysis CPR-01 recombinant inbred line in F10 generation NA Ca4 21308168 0 Ca4 22718853 0 3.54e-05 10.1111/pbi.12964 NA NA t3827.T002808 CPR01-qAB4.4 6 resistance to ascochyta blight NGS-based BSA analysis CPR-01 recombinant inbred line in F10 generation NA Ca4 24079492 0 Ca4 31119455 0 3.65e-05 10.1111/pbi.12964 NA NA t3827.T002809 CPR01-qAB4.5 6 resistance to ascochyta blight NGS-based BSA analysis CPR-01 recombinant inbred line in F10 generation NA Ca4 43767782 0 Ca4 45358899 0 6.59e-05 10.1111/pbi.12964 NA NA t3827.T002810 CPR01-qAB6.1 6 resistance to ascochyta blight NGS-based BSA analysis CPR-01 recombinant inbred line in F10 generation NA Ca6 1463739 0 Ca6 2329958 0 4.04e-05 10.1111/pbi.12964 NA NA t3827.T002811 CPR01-qAB6.2 6 resistance to ascochyta blight NGS-based BSA analysis CPR-01 recombinant inbred line in F10 generation NA Ca6 62932215 0 Ca6 64247506 0 1.12e-07 10.1111/pbi.12964 NA NA t3827.T002812 CPR02-qAB2.1 6 resistance to ascochyta blight NGS-based BSA analysis CPR-02 recombinant inbred line in F10 generation NA Ca2 18172683 0 Ca2 18924423 0 1.23e-05 10.1111/pbi.12964 NA NA t3827.T002813 CPR02-qAB4.1 6 resistance to ascochyta blight NGS-based BSA analysis CPR-02 recombinant inbred line in F10 generation NA Ca4 24385212 0 Ca4 27090913 0 1.1e-05 10.1111/pbi.12964 NA NA t3827.T002814 CPR02-qAB4.2 6 resistance to ascochyta blight NGS-based BSA analysis CPR-02 recombinant inbred line in F10 generation NA Ca4 27811455 0 Ca4 28234398 0 2.82e-05 10.1111/pbi.12964 NA NA t3827.T002815 CPR02-qAB4.3 6 resistance to ascochyta blight NGS-based BSA analysis CPR-02 recombinant inbred line in F10 generation NA Ca4 28763335 0 Ca4 31068540 0 6.09e-06 10.1111/pbi.12964 NA NA t3827.T002816 CPR02-qAB4.4 6 resistance to ascochyta blight NGS-based BSA analysis CPR-02 recombinant inbred line in F10 generation NA Ca4 54159134 0 Ca4 55479633 0 3.64e-07 10.1111/pbi.12964 NA NA t3827.T002817 CPR02-qAB7.1 6 resistance to ascochyta blight NGS-based BSA analysis CPR-02 recombinant inbred line in F10 generation NA Ca7 48740698 0 Ca7 48980912 0 6.5e-06 10.1111/pbi.12964 NA NA t3827.T002818 qab-4.1 6 resistance to ascochyta blight (AB) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation NA 4 0 0 0 0 10.1270/jsbbs.20085 NA NA t3827.T002819 qab-4.1 6 resistance to ascochyta blight (AB) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021163.1.32280291 NA 4 0 0 CNC_021163.1.37933917 0 0 260.9 3.53 10.1270/jsbbs.20085 NA NA t3827.T002820 qab-4.2 6 resistance to ascochyta blight (AB) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021163.1.23799836 NA 4 0 0 CNC_021163.1.24184658 0 0 979 3.13 10.1270/jsbbs.20085 NA NA t3827.T002821 qab-4.2 6 resistance to ascochyta blight (AB) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021163.1.23799836 NA 4 0 0 CNC_021163.1.24184658 0 0 979 4.33 10.1270/jsbbs.20085 NA NA t3827.T002822 qab-7.1 6 resistance to ascochyta blight (AB) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021166.1.34330294 NA 7 0 0 CNC_021166.1.34330283 0 0 491.5 3.26 10.1270/jsbbs.20085 NA NA t3827.T002823 qab-7.1 6 resistance to ascochyta blight (AB) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021166.1.34330294 NA 7 0 0 CNC_021166.1.34330283 0 0 491.5 3.57 10.1270/jsbbs.20085 NA NA t3827.T002824 qbgm-3.1 6 resistance to botrytis grey mould (BGM) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021162.1.25569161 NA 3 0 0 CNC_021162.1.27507201 0 0 215.2 3.88 10.1270/jsbbs.20085 NA NA t3827.T002825 qbgm-4.1 6 resistance to botrytis grey mould (BGM) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021163.1.11476712 NA 4 0 0 CNC_021163.1.7883450 0 0 73.7 6.03 10.1270/jsbbs.20085 NA NA t3827.T002826 qbgm-4.1 6 resistance to botrytis grey mould (BGM) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021163.1.11476712 NA 4 0 0 CNC_021163.1.7883450 0 0 73.7 7.08 10.1270/jsbbs.20085 NA NA t3827.T002827 qbgm-4.2 6 resistance to botrytis grey mould (BGM) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021163.1.38343874 NA 4 0 0 CNC_021163.1.28025601 0 0 193.5 3.5 10.1270/jsbbs.20085 NA NA t3827.T002828 qbgm-4.3 6 resistance to botrytis grey mould (BGM) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021163.1.38343874 NA 4 0 0 CNC_021163.1.28025601 0 0 193.5 3.71 10.1270/jsbbs.20085 NA NA t3827.T002829 qbgm-5.1 6 resistance to botrytis grey mould (BGM) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021164.1.23539887 NA 5 0 0 CNC_021164.1.19923058 0 0 37.8 3.16 10.1270/jsbbs.20085 NA NA t3827.T002830 qbgm-5.1 6 resistance to botrytis grey mould (BGM) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021164.1.23539887 NA 5 0 0 CNC_021164.1.19923058 0 0 37.8 3.83 10.1270/jsbbs.20085 NA NA t3827.T002831 qbgm-6.1 6 resistance to botrytis grey mould (BGM) composite interval mapping (CIM) 187 interspecific RILs recombinant inbred line in F8 generation CNC_021165.1.1002514 NA 6 0 0 CNC_021165.1.8008006 0 0 0 3.33 10.1270/jsbbs.20085 NA NA t3827.T002832 qUlwf03 6 Unit larval weight at flowering stage (ULWF) Interval mapping inter-specific RIL mapping population inter-specific recombinant inbred line Ca3_26424114 NA 0 0 Ca3_24150445; Ca3_39192658 0 0 12.45 4.56 10.1002/tpg2.20071 NA NA t3827.T002833 qUlwv01 6 Unit larval weight at vegetative stage (ULWV) Interval mapping inter-specific RIL mapping population inter-specific recombinant inbred line Ca1_13535827 NA 0 0 Ca1_13607141; Ca1_12120720 0 0 125.3 3.71 10.1002/tpg2.20071 NA NA t3827.T002834 GK 14 days DS 1 Ascochyta Resistance R package qtl2 Interspecific cross lines F2:5 NA 4.04 0 0 0 0 2 - 49.6 3.1 10.3390/genes14020316 NA NA t3827.T002835 GK 21 days DS 1 Ascochyta Resistance R package qtl2 Interspecific cross lines F2:5 NA 33.36 0 0 0 0 13.8 - 33.4 3.06 10.3390/genes14020316 NA NA t3827.T002836 GK 7 days DS 1 Ascochyta Resistance R package qtl2 Interspecific cross lines F2:5 NA 30.81 0 0 0 0 20.2 - 39 3.09 10.3390/genes14020316 NA NA t3827.T002837 GO 42 days DS 1 Ascochyta Resistance R package qtl2 Interspecific cross lines F2:5 NA 3.22 0 0 0 0 0.2 - 19.8 3.08 10.3390/genes14020316 NA NA t3827.T002838 1 Disease Incidence (DI) Phenotypic screening and Marker MABC lines BC3F3 progenies NA 0 0 0 0 10.3389/fgene.2022.924287 NA NA t3827.T002839 1 Disease Resistance GWAS 184 Chickpea accessions NA 13331455 0 0 0 0 2.93E−08 10.3389/fgene.2022.945787 NA NA t3827.T002840 1 Disease Resistance GWAS 184 Chickpea accessions NA 13648457 0 0 0 0 9.30E−11 10.3389/fgene.2022.945787 NA NA t3827.T002841 1 Disease Resistance GWAS 184 Chickpea accessions NA 14007934 0 0 0 0 8.06E−09 10.3389/fgene.2022.945787 NA NA t3827.T002842 1 Disease Resistance GWAS 184 Chickpea accessions NA 14057710 0 0 0 0 1.19E−08 10.3389/fgene.2022.945787 NA NA t3827.T002843 1 Disease Resistance GWAS 184 Chickpea accessions NA 14199535 0 0 0 0 6.34E−05 10.3389/fgene.2022.945787 NA NA t3827.T002844 1 Disease Resistance GWAS 184 Chickpea accessions NA 14221600 0 0 0 0 2.58E−05 10.3389/fgene.2022.945787 NA NA t3827.T002845 1 Disease Resistance GWAS 184 Chickpea accessions NA 14818403 0 0 0 0 3.57E−05 10.3389/fgene.2022.945787 NA NA t3827.T002846 1 Disease Resistance GWAS 184 Chickpea accessions NA 14972314 0 0 0 0 2.25E−08 10.3389/fgene.2022.945787 NA NA t3827.T002847 1 Disease Resistance GWAS 184 Chickpea accessions NA 15514982 0 0 0 0 3.88E−11 10.3389/fgene.2022.945787 NA NA t3827.T002848 1 Disease Resistance GWAS 184 Chickpea accessions NA 1646485 0 0 0 0 2.79E−05 10.3389/fgene.2022.945787 NA NA t3827.T002849 1 Disease Resistance GWAS 184 Chickpea accessions NA 17315201 0 0 0 0 4.23E−05 10.3389/fgene.2022.945787 NA NA t3827.T002850 1 Disease Resistance GWAS 184 Chickpea accessions NA 17444963 0 0 0 0 1.00E−06 10.3389/fgene.2022.945787 NA NA t3827.T002851 1 Disease Resistance GWAS 184 Chickpea accessions NA 1765418 0 0 0 0 1.49E−05 10.3389/fgene.2022.945787 NA NA t3827.T002852 1 Disease Resistance GWAS 184 Chickpea accessions NA 18156610 0 0 0 0 2.59E−05 10.3389/fgene.2022.945787 NA NA t3827.T002853 1 Disease Resistance GWAS 184 Chickpea accessions NA 1840434 0 0 0 0 1.35E−05 10.3389/fgene.2022.945787 NA NA t3827.T002854 1 Disease Resistance GWAS 184 Chickpea accessions NA 18585784 0 0 0 0 5.18E−05 10.3389/fgene.2022.945787 NA NA t3827.T002855 1 Disease Resistance GWAS 184 Chickpea accessions NA 18665430 0 0 0 0 2.71E−05 10.3389/fgene.2022.945787 NA NA t3827.T002856 1 Disease Resistance GWAS 184 Chickpea accessions NA 2249905 0 0 0 0 2.52E−05 10.3389/fgene.2022.945787 NA NA t3827.T002857 1 Disease Resistance GWAS 184 Chickpea accessions NA 22761060 0 0 0 0 8.85E−05 10.3389/fgene.2022.945787 NA NA t3827.T002858 1 Disease Resistance GWAS 184 Chickpea accessions NA 22925858 0 0 0 0 3.88E−05 10.3389/fgene.2022.945787 NA NA t3827.T002859 1 Disease Resistance GWAS 184 Chickpea accessions NA 26889766 0 0 0 0 6.57E−05 10.3389/fgene.2022.945787 NA NA t3827.T002860 1 Disease Resistance GWAS 184 Chickpea accessions NA 26901711 0 0 0 0 4.01E−09 10.3389/fgene.2022.945787 NA NA t3827.T002861 1 Disease Resistance GWAS 184 Chickpea accessions NA 28579479 0 0 0 0 3.99E−05 10.3389/fgene.2022.945787 NA NA t3827.T002862 1 Disease Resistance GWAS 184 Chickpea accessions NA 28639214 0 0 0 0 9.97E−05 10.3389/fgene.2022.945787 NA NA t3827.T002863 1 Disease Resistance GWAS 184 Chickpea accessions NA 2943215 0 0 0 0 1.76E−13 10.3389/fgene.2022.945787 NA NA t3827.T002864 1 Disease Resistance GWAS 184 Chickpea accessions NA 31521962 0 0 0 0 7.48E−06 10.3389/fgene.2022.945787 NA NA t3827.T002865 1 Disease Resistance GWAS 184 Chickpea accessions NA 33795751 0 0 0 0 7.28E−05 10.3389/fgene.2022.945787 NA NA t3827.T002866 1 Disease Resistance GWAS 184 Chickpea accessions NA 34906194 0 0 0 0 1.37E−13 10.3389/fgene.2022.945787 NA NA t3827.T002867 1 Disease Resistance GWAS 184 Chickpea accessions NA 37220588 0 0 0 0 6.10E−05 10.3389/fgene.2022.945787 NA NA t3827.T002868 1 Disease Resistance GWAS 184 Chickpea accessions NA 37840504 0 0 0 0 6.28E−05 10.3389/fgene.2022.945787 NA NA t3827.T002869 1 Disease Resistance GWAS 184 Chickpea accessions NA 42306937 0 0 0 0 7.26E−05 10.3389/fgene.2022.945787 NA NA t3827.T002870 1 Disease Resistance GWAS 184 Chickpea accessions NA 42835144 0 0 0 0 5.34E−05 10.3389/fgene.2022.945787 NA NA t3827.T002871 1 Disease Resistance GWAS 184 Chickpea accessions NA 44936836 0 0 0 0 9.94E−05 10.3389/fgene.2022.945787 NA NA t3827.T002872 1 Disease Resistance GWAS 184 Chickpea accessions NA 45529647 0 0 0 0 5.82E−05 10.3389/fgene.2022.945787 NA NA t3827.T002873 1 Disease Resistance GWAS 184 Chickpea accessions NA 666303 0 0 0 0 8.92E−05 10.3389/fgene.2022.945787 NA NA t3827.T002874 qpsd4-1 1 Disease Resistance ICIM-ADD CRIL-7 [C. reticulatum (PI 599072) x C. arietinum (FLIP 84-92C)] RILs 1793365SNPCa4 NA 98 0 0 1674052SNPCa4 0 0 25.24 10.3389/fgene.2022.945787 NA NA t3827.T002875 qpsd8-1 1 Disease Resistance ICIM-ADD CRIL-7 [C. reticulatum (PI 599072) x C. arietinum (FLIP 84-92C)] RILs 2171187SNPCa8 NA 36 0 0 2088222SNPCa8 0 0 3.31 10.3389/fgene.2022.945787 NA NA t3827.T002876 QTL-hotspot_a 1 Drought stress response mechanism Bin Mapping-based QTL analysis a JG 11+ (Drought Tolerent) NA 0 0 0 0 10.1002/tpg2.20337 NA NA t3827.T002877 QTL-hotspot_b 1 Drought stress response mechanism Bin Mapping-based QTL analysis a JG 11+ (Drought Tolerent) NA 0 0 0 0 10.1002/tpg2.20337 NA NA t3827.T002878 1 Drought Tolerance Composite Interval Mapping (CIM) RILs F8 NA 0 0 0 0 10.3389/fgene.2022.953898 NA NA t3827.T002879 1 Drought Tolerance Genome-Wide Composite Interval M RILs F11 NA 0 0 0 0 10.1038/s41598-023-44990-y NA NA t3827.T002880 1 Fusarium Wilt Resistant Phenotypic screening and Marker MABC lines BC3F3 progenies NA 0 0 0 0 10.3389/fgene.2022.924287 NA NA t3827.T002881 Meta-QTL5 1 Heat tolerance related Traits: Chlorophyll Content (CHL), Harvest Index (HI) & Biological Yield/Plant (BYPP) Meta QTL Analysis RIL population F2 SCA6_7820481 NA 0 0 SCA6_7929338 0 0 10.3389/fpls.2023.1274759 NA NA t3827.T002882 Meta-QTL2 1 Heat tolerance related Traits: Days to Flower Inotiation (DFI), Days to Maturity (DM) & Days to Pod Initiation (DPI) Meta QTL Analysis RIL population F2 SCA1_19787122 NA 0 0 SCA1_19586410 0 0 10.3389/fpls.2023.1274759 NA NA t3827.T002883 Meta-QTL1 1 Heat tolerance related Traits: Days to Maturity (DM) & Days to 50% Flowering (DFF) Meta QTL Analysis RIL population F2 SCA1_34969214 NA 0 0 SCA1_18234886 0 0 10.3389/fpls.2023.1274759 NA NA t3827.T002884 Meta-QTL6 1 Heat tolerance related Traits: Harvest Index (HI), Relative Leaf Water Content (RLWC) & Nitrogen Balance Index (NBI) Meta QTL Analysis RIL population F2 SCA7_28235343 NA 0 0 SCA7_36854126 0 0 10.3389/fpls.2023.1274759 NA NA t3827.T002885 Meta-QTL3 1 Heat tolerance related Traits: Heat tolerance related Traits: Primary Branch Number (PB) & Normalized Difference Vegetation Index (NDVI) Meta QTL Analysis RIL population F2 TA142 NA 0 0 NCPGR149 0 0 10.3389/fpls.2023.1274759 NA NA t3827.T002886 Meta-QTL4 1 Heat tolerance related Traits: Number of Filled Pods per Plot (FPOD), Visual Score (VS), Seed Yield/Plant (SYPP) & Biological Yield/Plant (BYPP) Meta QTL Analysis RIL population F2 SCA6_10670773 NA 0 0 SCA6_10672468 0 0 10.3389/fpls.2023.1274759 NA NA t3827.T002887 cry1Ac 1 Pod Borer Resistance PCR Marker assisted backcross lines BC1F1 NA 0 0 0 0 10.3389/fgene.2022.847647 NA NA t3827.T002888 Ca4 QTL 1 Resitance to the root lesion nematode Pratylenchus thornei Whole Genome Average Interval Ma RILs F6 NA 0 0 0 0 2.55 0.0003 10.1007/s11032-021-01271-8 NA NA t3827.T002889 Ca7 QTL 1 Resitance to the root lesion nematode Pratylenchus thornei Whole Genome Average Interval Ma RILs F7 NA 0 0 0 0 22.56 ˂ 0.0001 10.1007/s11032-021-01271-8 NA NA t3827.T002890 Ca7 QTL 1 Resitance to the root lesion nematode Pratylenchus thornei Whole Genome Average Interval Ma RILs F7 NA 0 0 0 0 5.96 ˂ 0.0001 10.1007/s11032-021-01271-8 NA NA t3827.T002891 qSSR4-1 1 Sclerotinia stem rot resistance (SSR) Inclusive Composite Interval Map PBA HatTrick X Kyabra chickpea RILs F7 11 062 500 NA 0 0 8 822 765 0 0 0 10.6188 10.1071/FP21216 NA NA t3827.T002892 qSSR4-2 1 Sclerotinia stem rot resistance (SSR) Inclusive Composite Interval Map PBA HatTrick X Kyabra chickpea RILs F7 5 825 802 NA 0 0 5 826 178 0 0 74 3.0732 10.1071/FP21216 NA NA t3827.T002893 qSSR6-1 1 Sclerotinia stem rot resistance (SSR) Inclusive Composite Interval Map PBA HatTrick X Kyabra chickpea RILs F7 5 825 910 NA 0 0 13 144 413 0 0 2 3.2097 10.1071/FP21216 NA NA t3827.T002894 qSSR7-1 1 Sclerotinia stem rot resistance (SSR) Inclusive Composite Interval Map PBA HatTrick X Kyabra chickpea RILs F7 29 967 333 NA 0 0 29 967 370 0 0 46 4.7374 10.1071/FP21216 NA NA t3827.T002895 CaqSW1.1 3 100-Seed Weight Compisite Interval Mapping (CIM) RIL population F8 NA 0 0 0 0 38.7 - 40.4 10.1093/plphys/kiac550 NA NA t3827.T002896 CaqSW4.1 3 100-Seed Weight Compisite Interval Mapping (CIM) RIL population F8 NA 0 0 0 0 33.1 - 33.6 10.1093/plphys/kiac550 NA NA t3827.T002897 CaqSW4.2 3 100-Seed Weight Compisite Interval Mapping (CIM) RIL population F8 NA 0 0 0 0 129 - 129.8 10.1093/plphys/kiac550 NA NA t3827.T002898 3 100-seed weight (SW) NA 0 0 0 0 10.1093/plphys/kiac550 NA NA t3827.T002899 3 Drought Tolerence and Yield Compisite Interval Mapping (CIM) RIL population F8 NA 0 0 0 0 10.1093/plphys/kiac550 NA NA t3827.T002900 3 Drought yield index per hectare DYI(H) NA 0 0 0 0 10.1093/plphys/kiac550 NA NA t3827.T002901 3 Drought yield index per plant DYI(P) NA 0 0 0 0 10.1093/plphys/kiac550 NA NA t3827.T002902 CaeqDYI(P/H)1.1 3 Drought Yield Index per Plant per Hectare Compisite Interval Mapping (CIM) RIL population F8 NA 0 0 0 0 39 - 39.5 22.2 10.1093/plphys/kiac550 NA NA t3827.T002903 CaqDYI(P/H)1.1 3 Drought Yield Index per Plant per Hectare Compisite Interval Mapping (CIM) RIL population F8 NA 0 0 0 0 38.7 - 40.4 17.6 10.1093/plphys/kiac550 NA NA t3827.T002904 CaqDYI(P/H)4.1 3 Drought Yield Index per Plant per Hectare Compisite Interval Mapping (CIM) RIL population F8 NA 0 0 0 0 32.8 - 33.6 10.1093/plphys/kiac550 NA NA t3827.T002905 CaqDYI(P/H)4.2 3 Drought Yield Index per Plant per Hectare Compisite Interval Mapping (CIM) RIL population F8 NA 0 0 0 0 129 - 129.8 10.1093/plphys/kiac550 NA NA t3827.T002906 CaqPN1.1 3 Pod Number Compisite Interval Mapping (CIM) RIL population F8 NA 0 0 0 0 39.1 - 40.4 10.1093/plphys/kiac550 NA NA t3827.T002907 CaqPN4.1 3 Pod Number Compisite Interval Mapping (CIM) RIL population F8 NA 0 0 0 0 33.2 - 33.6 10.1093/plphys/kiac550 NA NA t3827.T002908 CaqPN4.2 3 Pod Number Compisite Interval Mapping (CIM) RIL population F8 NA 0 0 0 0 129.6 - 129.8 10.1093/plphys/kiac550 NA NA t3827.T002909 3 Pod number per plant (PN) NA 0 0 0 0 10.1093/plphys/kiac550 NA NA t3827.T002910 CaqSN1.1 3 Seed Number Compisite Interval Mapping (CIM) RIL population F8 NA 0 0 0 0 39.1 - 40.4 10.1093/plphys/kiac550 NA NA t3827.T002911 CaqSN4.1 3 Seed Number Compisite Interval Mapping (CIM) RIL population F8 NA 0 0 0 0 33.2 - 33.6 10.1093/plphys/kiac550 NA NA t3827.T002912 CaqSN4.2 3 Seed Number Compisite Interval Mapping (CIM) RIL population F8 NA 0 0 0 0 129.6 - 129.8 10.1093/plphys/kiac550 NA NA t3827.T002913 3 Seed number per plant (SN) NA 0 0 0 0 10.1093/plphys/kiac550 NA NA t3827.T002914 3 Yield per hectare (YH) NA 0 0 0 0 10.1093/plphys/kiac550 NA NA t3827.T002915 3 Yield per plant (YP) NA 0 0 0 0 10.1093/plphys/kiac550 NA NA t3827.T002916 qhsw-01 3 100 -Seed Weight (gm) (HSW) Composite Interval Mapping (CIM) RILs F8 CNC_021161.1.24009817 NA 0 0 CNC_021161.1.30341279 0 0 3.69 10.3389/fgene.2022.953898 NA NA t3827.T002917 qhsw-01 3 100 -Seed Weight (gm) (HSW) Composite Interval Mapping (CIM) RILs F8 CNC_021165.1.21676871 NA 0 0 CNC_021165.1.32146805 0 0 3.35 10.3389/fgene.2022.953898 NA NA t3827.T002918 qhsw-02 3 100 -Seed Weight (gm) (HSW) Composite Interval Mapping (CIM) RILs F8 CNC_021166.1.12612605 NA 0 0 CNC_021166.1.23023466 0 0 4.94 10.3389/fgene.2022.953898 NA NA t3827.T002919 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12341550 2.39119327374241 10.1002/tpg2.20333 NA NA t3827.T002920 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12524555 3.11704934036096 10.1002/tpg2.20333 NA NA t3827.T002921 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12582547 4.98312107991466 10.1002/tpg2.20333 NA NA t3827.T002922 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12582547 9.85690151981532 10.1002/tpg2.20333 NA NA t3827.T002923 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12584240 4.3789188807755e 10.1002/tpg2.20333 NA NA t3827.T002924 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12634975 2.34914371300963 10.1002/tpg2.20333 NA NA t3827.T002925 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12641759 4.0903353483409e 10.1002/tpg2.20333 NA NA t3827.T002926 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12641759 5.58148126069497 10.1002/tpg2.20333 NA NA t3827.T002927 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12735061 1.89049212828052 10.1002/tpg2.20333 NA NA t3827.T002928 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12735061 2.31469930196532 10.1002/tpg2.20333 NA NA t3827.T002929 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12857681 7.40539132116021 10.1002/tpg2.20333 NA NA t3827.T002930 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12858001 2.52295866204284 10.1002/tpg2.20333 NA NA t3827.T002931 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12858001 2.82269436052005 10.1002/tpg2.20333 NA NA t3827.T002932 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12858001 3.9861629160072e 10.1002/tpg2.20333 NA NA t3827.T002933 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12887728 2.25417868512291 10.1002/tpg2.20333 NA NA t3827.T002934 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12887728 5.99677615097479 10.1002/tpg2.20333 NA NA t3827.T002935 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12888679 1.52367105576899 10.1002/tpg2.20333 NA NA t3827.T002936 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12888679 3.98014126245208 10.1002/tpg2.20333 NA NA t3827.T002937 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12888679 5.78283716797723 10.1002/tpg2.20333 NA NA t3827.T002938 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12898358 1.77565689533603 10.1002/tpg2.20333 NA NA t3827.T002939 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12926479 1.03391474883439 10.1002/tpg2.20333 NA NA t3827.T002940 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12926479 6.7e-08 10.1002/tpg2.20333 NA NA t3827.T002941 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12926479 7.18074582317412 10.1002/tpg2.20333 NA NA t3827.T002942 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12933940 1.42967078635105 10.1002/tpg2.20333 NA NA t3827.T002943 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12933940 3.51191795607672 10.1002/tpg2.20333 NA NA t3827.T002944 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12969201 4.8257421722996e 10.1002/tpg2.20333 NA NA t3827.T002945 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12969201 7.18324608726653 10.1002/tpg2.20333 NA NA t3827.T002946 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12969201 7.2320937458459e 10.1002/tpg2.20333 NA NA t3827.T002947 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12969778 1.09647603660499 10.1002/tpg2.20333 NA NA t3827.T002948 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12969778 1.3594809319312e 10.1002/tpg2.20333 NA NA t3827.T002949 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 12969778 2.62210253272549 10.1002/tpg2.20333 NA NA t3827.T002950 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13024647 7.59168145510715 10.1002/tpg2.20333 NA NA t3827.T002951 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13024647 8.55691395936187 10.1002/tpg2.20333 NA NA t3827.T002952 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13024647 8.90675587335778 10.1002/tpg2.20333 NA NA t3827.T002953 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13031878 1.32279489911577 10.1002/tpg2.20333 NA NA t3827.T002954 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13031878 1.81049741862157 10.1002/tpg2.20333 NA NA t3827.T002955 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13034773 9.18756866481339 10.1002/tpg2.20333 NA NA t3827.T002956 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13036288 3.01512102020255 10.1002/tpg2.20333 NA NA t3827.T002957 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13036288 4.05566579726747 10.1002/tpg2.20333 NA NA t3827.T002958 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13036288 4.792481130341e- 10.1002/tpg2.20333 NA NA t3827.T002959 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13044538 1.58121684235035 10.1002/tpg2.20333 NA NA t3827.T002960 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13053298 1.22206009523651 10.1002/tpg2.20333 NA NA t3827.T002961 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13053298 2.65502123831418 10.1002/tpg2.20333 NA NA t3827.T002962 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13056600 6.60659801340517 10.1002/tpg2.20333 NA NA t3827.T002963 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13095646 1.2e-08 10.1002/tpg2.20333 NA NA t3827.T002964 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13095646 2.9267911368228e 10.1002/tpg2.20333 NA NA t3827.T002965 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13099523 1.09591512516294 10.1002/tpg2.20333 NA NA t3827.T002966 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13099523 1.18948404245063 10.1002/tpg2.20333 NA NA t3827.T002967 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13099523 7.16332902104432 10.1002/tpg2.20333 NA NA t3827.T002968 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13104366 1.20157883589946 10.1002/tpg2.20333 NA NA t3827.T002969 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13104366 4.45800164669017 10.1002/tpg2.20333 NA NA t3827.T002970 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13104366 6.45008912388054 10.1002/tpg2.20333 NA NA t3827.T002971 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13105319 1.07472691739854 10.1002/tpg2.20333 NA NA t3827.T002972 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13105319 1.18752951489927 10.1002/tpg2.20333 NA NA t3827.T002973 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13130877 1e-09 10.1002/tpg2.20333 NA NA t3827.T002974 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13130877 3.83104577354907 10.1002/tpg2.20333 NA NA t3827.T002975 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13130877 8.51938371532976 10.1002/tpg2.20333 NA NA t3827.T002976 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13142636 4.67827599801561 10.1002/tpg2.20333 NA NA t3827.T002977 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13142636 7.84322242906537 10.1002/tpg2.20333 NA NA t3827.T002978 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13145637 2.80224365246432 10.1002/tpg2.20333 NA NA t3827.T002979 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13151927 4.9e-08 10.1002/tpg2.20333 NA NA t3827.T002980 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13157712 1.00372014504122 10.1002/tpg2.20333 NA NA t3827.T002981 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13157712 2.53149280479412 10.1002/tpg2.20333 NA NA t3827.T002982 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13157712 2.89683134876839 10.1002/tpg2.20333 NA NA t3827.T002983 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13158189 2.62983853603267 10.1002/tpg2.20333 NA NA t3827.T002984 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13158189 3.4098685743729e 10.1002/tpg2.20333 NA NA t3827.T002985 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13158189 4.14377314172516 10.1002/tpg2.20333 NA NA t3827.T002986 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13158302 1.05308213851284 10.1002/tpg2.20333 NA NA t3827.T002987 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13158302 4e-09 10.1002/tpg2.20333 NA NA t3827.T002988 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13158302 5.92425446617552 10.1002/tpg2.20333 NA NA t3827.T002989 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13164178 1.01599746489151 10.1002/tpg2.20333 NA NA t3827.T002990 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13164178 2.21251150708632 10.1002/tpg2.20333 NA NA t3827.T002991 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13164178 2.28690580983379 10.1002/tpg2.20333 NA NA t3827.T002992 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13168127 2.10351349907247 10.1002/tpg2.20333 NA NA t3827.T002993 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13168127 5.87893319367146 10.1002/tpg2.20333 NA NA t3827.T002994 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13169189 2.04753737156149 10.1002/tpg2.20333 NA NA t3827.T002995 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13169189 2.96198577726689 10.1002/tpg2.20333 NA NA t3827.T002996 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13169189 5.42940620923536 10.1002/tpg2.20333 NA NA t3827.T002997 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13183465 1.06084585614523 10.1002/tpg2.20333 NA NA t3827.T002998 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13183465 1e-09 10.1002/tpg2.20333 NA NA t3827.T002999 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13187106 2.01036654458656 10.1002/tpg2.20333 NA NA t3827.T003000 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13187106 2.35219596926344 10.1002/tpg2.20333 NA NA t3827.T003001 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13189186 1.52639360794198 10.1002/tpg2.20333 NA NA t3827.T003002 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13189186 2.8896530742275e 10.1002/tpg2.20333 NA NA t3827.T003003 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13189186 6.95652869515644 10.1002/tpg2.20333 NA NA t3827.T003004 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13194082 3.58288078570068 10.1002/tpg2.20333 NA NA t3827.T003005 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13194082 3.59825078012096 10.1002/tpg2.20333 NA NA t3827.T003006 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13195891 1.89706631358491 10.1002/tpg2.20333 NA NA t3827.T003007 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13195891 5.0284008523404e 10.1002/tpg2.20333 NA NA t3827.T003008 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13195891 8.11241453622734 10.1002/tpg2.20333 NA NA t3827.T003009 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13202563 1.2202405001584e 10.1002/tpg2.20333 NA NA t3827.T003010 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13202563 1.55285664137329 10.1002/tpg2.20333 NA NA t3827.T003011 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13221840 1.17018855002727 10.1002/tpg2.20333 NA NA t3827.T003012 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13221840 2.40082677823601 10.1002/tpg2.20333 NA NA t3827.T003013 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13221840 6.38793460050938 10.1002/tpg2.20333 NA NA t3827.T003014 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13257901 1.33601635169258 10.1002/tpg2.20333 NA NA t3827.T003015 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13257901 1.3e-08 10.1002/tpg2.20333 NA NA t3827.T003016 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13272042 4.38674176443048 10.1002/tpg2.20333 NA NA t3827.T003017 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13272042 4.3e-08 10.1002/tpg2.20333 NA NA t3827.T003018 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13272042 5.9322177582115e 10.1002/tpg2.20333 NA NA t3827.T003019 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13282908 1.0825506428815e 10.1002/tpg2.20333 NA NA t3827.T003020 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13282908 6.02372552618384 10.1002/tpg2.20333 NA NA t3827.T003021 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13282908 7.04694944024573 10.1002/tpg2.20333 NA NA t3827.T003022 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13323947 1.02322690832017 10.1002/tpg2.20333 NA NA t3827.T003023 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13323947 1.27692592815113 10.1002/tpg2.20333 NA NA t3827.T003024 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13323947 8.31041003861046 10.1002/tpg2.20333 NA NA t3827.T003025 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13327480 1.4366203304331e 10.1002/tpg2.20333 NA NA t3827.T003026 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13327480 2.22902315448517 10.1002/tpg2.20333 NA NA t3827.T003027 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13327480 5.6164113240166e 10.1002/tpg2.20333 NA NA t3827.T003028 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13331455 1.2872281467904e 10.1002/tpg2.20333 NA NA t3827.T003029 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13331455 4.48512318345018 10.1002/tpg2.20333 NA NA t3827.T003030 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13331455 8.80243810898371 10.1002/tpg2.20333 NA NA t3827.T003031 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13341828 1.61255152634053 10.1002/tpg2.20333 NA NA t3827.T003032 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13341828 2.0709627629267e 10.1002/tpg2.20333 NA NA t3827.T003033 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13341828 2.18745544926281 10.1002/tpg2.20333 NA NA t3827.T003034 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13365751 6.20227756656007 10.1002/tpg2.20333 NA NA t3827.T003035 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13365751 6.94442052060298 10.1002/tpg2.20333 NA NA t3827.T003036 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13365751 8.3056748159835e 10.1002/tpg2.20333 NA NA t3827.T003037 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13381856 2.71257634370852 10.1002/tpg2.20333 NA NA t3827.T003038 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13386048 3.09400681217739 10.1002/tpg2.20333 NA NA t3827.T003039 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13386048 3.29770540565098 10.1002/tpg2.20333 NA NA t3827.T003040 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13386048 4.91742429050383 10.1002/tpg2.20333 NA NA t3827.T003041 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13391772 1.33232289380715 10.1002/tpg2.20333 NA NA t3827.T003042 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13391772 3.78425126823305 10.1002/tpg2.20333 NA NA t3827.T003043 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13391772 3.91721495184059 10.1002/tpg2.20333 NA NA t3827.T003044 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13393260 2.87045703258309 10.1002/tpg2.20333 NA NA t3827.T003045 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13393260 3.46073872794608 10.1002/tpg2.20333 NA NA t3827.T003046 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13393260 5.3394310825152e 10.1002/tpg2.20333 NA NA t3827.T003047 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13394035 6.64914828931614 10.1002/tpg2.20333 NA NA t3827.T003048 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13394035 7.42939402749977 10.1002/tpg2.20333 NA NA t3827.T003049 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13394035 9.9585913746113e 10.1002/tpg2.20333 NA NA t3827.T003050 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13394283 1.8e-08 10.1002/tpg2.20333 NA NA t3827.T003051 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13394283 2.43351317517683 10.1002/tpg2.20333 NA NA t3827.T003052 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13418361 1.68854855439975 10.1002/tpg2.20333 NA NA t3827.T003053 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13418361 2.98296964770395 10.1002/tpg2.20333 NA NA t3827.T003054 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13418361 7.58998153923558 10.1002/tpg2.20333 NA NA t3827.T003055 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13420967 1.61177078284115 10.1002/tpg2.20333 NA NA t3827.T003056 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13420967 2.41174249028837 10.1002/tpg2.20333 NA NA t3827.T003057 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13420967 3.42238071664658 10.1002/tpg2.20333 NA NA t3827.T003058 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13421126 1.00919860164994 10.1002/tpg2.20333 NA NA t3827.T003059 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13421126 1.06984543276853 10.1002/tpg2.20333 NA NA t3827.T003060 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13421126 2.46492741129868 10.1002/tpg2.20333 NA NA t3827.T003061 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13436788 2.2585153962385e 10.1002/tpg2.20333 NA NA t3827.T003062 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13436788 3.74371808452068 10.1002/tpg2.20333 NA NA t3827.T003063 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13436788 5.69204152623207 10.1002/tpg2.20333 NA NA t3827.T003064 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13439122 1.74036091048274 10.1002/tpg2.20333 NA NA t3827.T003065 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13439122 4.3437569288009e 10.1002/tpg2.20333 NA NA t3827.T003066 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13439122 9.34572278766593 10.1002/tpg2.20333 NA NA t3827.T003067 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13439534 1.06561717997108 10.1002/tpg2.20333 NA NA t3827.T003068 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13439534 2.9962847959632e 10.1002/tpg2.20333 NA NA t3827.T003069 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13439534 7.36953391917012 10.1002/tpg2.20333 NA NA t3827.T003070 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13445618 1.72911743478789 10.1002/tpg2.20333 NA NA t3827.T003071 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13445618 3.61904765568415 10.1002/tpg2.20333 NA NA t3827.T003072 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13445618 7.37180685049825 10.1002/tpg2.20333 NA NA t3827.T003073 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13451984 1.33994002104818 10.1002/tpg2.20333 NA NA t3827.T003074 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13451984 2.9584281788514e 10.1002/tpg2.20333 NA NA t3827.T003075 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13451984 3.95843377013943 10.1002/tpg2.20333 NA NA t3827.T003076 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13457122 4e-09 10.1002/tpg2.20333 NA NA t3827.T003077 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13459684 1.87357566590503 10.1002/tpg2.20333 NA NA t3827.T003078 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13459684 6.07220760709069 10.1002/tpg2.20333 NA NA t3827.T003079 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13459684 8.7743324045152e 10.1002/tpg2.20333 NA NA t3827.T003080 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13460421 5.75981685560154 10.1002/tpg2.20333 NA NA t3827.T003081 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13460421 6.8000003169225e 10.1002/tpg2.20333 NA NA t3827.T003082 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13461044 1.25385630144729 10.1002/tpg2.20333 NA NA t3827.T003083 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13461044 3.27242105421276 10.1002/tpg2.20333 NA NA t3827.T003084 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13461044 3.49954604351411 10.1002/tpg2.20333 NA NA t3827.T003085 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13468331 8.35507147945782 10.1002/tpg2.20333 NA NA t3827.T003086 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13471138 1.31402323186726 10.1002/tpg2.20333 NA NA t3827.T003087 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13471138 3.19196651472642 10.1002/tpg2.20333 NA NA t3827.T003088 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13471138 5.89029519136505 10.1002/tpg2.20333 NA NA t3827.T003089 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13481269 1.34265806488777 10.1002/tpg2.20333 NA NA t3827.T003090 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13481269 2.68858769707926 10.1002/tpg2.20333 NA NA t3827.T003091 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13481269 7.86662566206764 10.1002/tpg2.20333 NA NA t3827.T003092 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13616834 2.71563576631152 10.1002/tpg2.20333 NA NA t3827.T003093 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13674149 3.6655433432613e 10.1002/tpg2.20333 NA NA t3827.T003094 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13687403 5.3e-08 10.1002/tpg2.20333 NA NA t3827.T003095 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13702763 1.64108328184067 10.1002/tpg2.20333 NA NA t3827.T003096 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13718934 8.74594149046237 10.1002/tpg2.20333 NA NA t3827.T003097 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 13761934 9.31541436041279 10.1002/tpg2.20333 NA NA t3827.T003098 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 29621309 3.54915107622419 10.1002/tpg2.20333 NA NA t3827.T003099 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 32591034 1.77438567092787 10.1002/tpg2.20333 NA NA t3827.T003100 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 32591034 9.48751389792107 10.1002/tpg2.20333 NA NA t3827.T003101 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 4455043 4.75463531534669 10.1002/tpg2.20333 NA NA t3827.T003102 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 4550255 3.71708298664259 10.1002/tpg2.20333 NA NA t3827.T003103 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 4863220 2e-09 10.1002/tpg2.20333 NA NA t3827.T003104 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 4864842 1.09716058333864 10.1002/tpg2.20333 NA NA t3827.T003105 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 4864842 2.0878333810074e 10.1002/tpg2.20333 NA NA t3827.T003106 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 4906096 9.19484385543781 10.1002/tpg2.20333 NA NA t3827.T003107 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 4914394 5.63363431927375 10.1002/tpg2.20333 NA NA t3827.T003108 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 4938145 3.2305359700387e 10.1002/tpg2.20333 NA NA t3827.T003109 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 4938145 8.28251138347233 10.1002/tpg2.20333 NA NA t3827.T003110 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 5012565 1.06428439288945 10.1002/tpg2.20333 NA NA t3827.T003111 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 5153907 3.25904263316849 10.1002/tpg2.20333 NA NA t3827.T003112 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 5153907 4e-09 10.1002/tpg2.20333 NA NA t3827.T003113 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 5183752 1.45416901582204 10.1002/tpg2.20333 NA NA t3827.T003114 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 5183752 2.77708858016872 10.1002/tpg2.20333 NA NA t3827.T003115 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 5208145 1.04406243515865 10.1002/tpg2.20333 NA NA t3827.T003116 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 5230109 7.04060044769572 10.1002/tpg2.20333 NA NA t3827.T003117 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 5255454 1.10765760212462 10.1002/tpg2.20333 NA NA t3827.T003118 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 5255454 2.44420610450347 10.1002/tpg2.20333 NA NA t3827.T003119 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 5256498 3.34597444245847 10.1002/tpg2.20333 NA NA t3827.T003120 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 5274881 2.37661531236324 10.1002/tpg2.20333 NA NA t3827.T003121 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 5318565 3.15626163695517 10.1002/tpg2.20333 NA NA t3827.T003122 3 100 seed weight GWAS MAGIC lines F7 NA 0 0 0 0 5329964 9.13289767923838 10.1002/tpg2.20333 NA NA t3827.T003123 3 100 Seed Weight (100SW) Fine Mapping Heterogenous Inbred Families (HIFs) NA 0 0 0 0 10.3389/fpls.2022.829566 NA NA t3827.T003124 3 100 Seed Weight (100SW) Phenotyping Near Isogenic Lines (NILs) NA 0 0 0 0 10.3389/fpls.2022.829566 NA NA t3827.T003125 q100SW5.1 3 100 Seed Weight (100SW) Genome-Wide Composite Interval M RILs F11 S5_4373523 NA 0 0 S5_5404385 0 0 15.41 3.08 10.1038/s41598-023-44990-y NA NA t3827.T003126 q100SW7.1 3 100 Seed Weight (100SW) Genome-Wide Composite Interval M RILs F11 S7_24190717 NA 0 0 S7_25218332 0 0 73.8 2.97 10.1038/s41598-023-44990-y NA NA t3827.T003127 Ca1_11574799 3 100 seed weight (g) Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 242.772 10.1002/tpg2.20333 NA NA t3827.T003128 Ca1_13279659 3 100 seed weight (g) Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 219.271 10.1002/tpg2.20333 NA NA t3827.T003129 Ca3_37349467 3 100 seed weight (g) Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 95.511 10.1002/tpg2.20333 NA NA t3827.T003130 Ca4_12823696 3 100 seed weight (g) Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 91.424 10.1002/tpg2.20333 NA NA t3827.T003131 Ca4_13407573 3 100 seed weight (g) Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 92.103 10.1002/tpg2.20333 NA NA t3827.T003132 Ca4_1466459 3 100 seed weight (g) Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 15.196 10.1002/tpg2.20333 NA NA t3827.T003133 Ca4_32458057 3 100 seed weight (g) Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 139.735 10.1002/tpg2.20333 NA NA t3827.T003134 Ca4_32537409 3 100 seed weight (g) Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 139.735 10.1002/tpg2.20333 NA NA t3827.T003135 Ca5_30240538 3 100 seed weight (g) Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 16.675 10.1002/tpg2.20333 NA NA t3827.T003136 Ca5_6638621 3 100 seed weight (g) Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 209.002 10.1002/tpg2.20333 NA NA t3827.T003137 Ca6_15115420 3 100 seed weight (g) Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 90.081 10.1002/tpg2.20333 NA NA t3827.T003138 Ca6_8354228 3 100 seed weight (g) Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 61.069 10.1002/tpg2.20333 NA NA t3827.T003139 Ca7_2343256 3 100 seed weight (g) Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 46.671 10.1002/tpg2.20333 NA NA t3827.T003140 Ca8_5063665 3 100 seed weight (g) Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 50.079 10.1002/tpg2.20333 NA NA t3827.T003141 Ca8_5063665 3 100 seed weight (g) Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 50.079 10.1002/tpg2.20333 NA NA t3827.T003142 3 100 Seed Weight (g) (HSW) MLM (K+Q) Chickpea accessions NA 0 0 0 0 0.0098 10.3390/biom13121722 NA NA t3827.T003143 3 100 Seed Weight (g) (HSW) MLM (K+Q) Chickpea accessions NA 0 0 0 0 0.01 10.3390/biom13121722 NA NA t3827.T003144 3 100 Seed Weight (g) (HSW) MLM (K+Q) Chickpea accessions NA 0 0 0 0 0.03 10.3390/biom13121722 NA NA t3827.T003145 3 100 Seed Weight (g) (HSW) MLM (K+Q) Chickpea accessions NA 0 0 0 0 0.04 10.3390/biom13121722 NA NA t3827.T003146 3 100 Seed Weight (HSW) Phenotypic screening and Marker MABC lines BC3F3 progenies NA 0 0 0 0 10.3389/fgene.2022.924287 NA NA t3827.T003147 3 100-Seed Weight (g) Cross C (PBG7 x BS 100E) BC2F2 and BC2F3 NA 0 0 0 0 10.3389/fgene.2022.847647 NA NA t3827.T003148 3 Biological Yield (g) Cross C (PBG7 x BS 100E) BC2F2 and BC2F3 NA 0 0 0 0 10.3389/fgene.2022.847647 NA NA t3827.T003149 3 Biomass GWAS MAGIC lines F7 NA 0 0 0 0 4045723 5.28425277706996 10.1002/tpg2.20333 NA NA t3827.T003150 3 Biomass GWAS MAGIC lines F7 NA 0 0 0 0 6082364 2.06848909506497 10.1002/tpg2.20333 NA NA t3827.T003151 qbio-01 3 Biomass per Plant (gm) (BIO) Composite Interval Mapping (CIM) RILs F8 CNC_021165.1.1002514 NA 0 0 CNC_021165.1.8008006 0 0 3.75 10.3389/fgene.2022.953898 NA NA t3827.T003152 qbio-02 3 Biomass per Plant (gm) (BIO) Composite Interval Mapping (CIM) RILs F8 CNC_021165.1.21676871 NA 0 0 CNC_021165.1.32146805 0 0 3.77 10.3389/fgene.2022.953898 NA NA t3827.T003153 qbio-03 3 Biomass per Plant (gm) (BIO) Composite Interval Mapping (CIM) RILs F8 CNC_021166.1.23023466 NA 0 0 CNC_021166.1.17171266 0 0 4.02 10.3389/fgene.2022.953898 NA NA t3827.T003154 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 13221840 8.1492738573442e 10.1002/tpg2.20333 NA NA t3827.T003155 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 13323947 2.46131260237114 10.1002/tpg2.20333 NA NA t3827.T003156 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 2416572 7.27628325321504 10.1002/tpg2.20333 NA NA t3827.T003157 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 2516218 7.1315282852806e 10.1002/tpg2.20333 NA NA t3827.T003158 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 2519081 6.64502657472505 10.1002/tpg2.20333 NA NA t3827.T003159 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 2557116 5.78172416200562 10.1002/tpg2.20333 NA NA t3827.T003160 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 2617940 8.17681697012042 10.1002/tpg2.20333 NA NA t3827.T003161 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 2674237 3.55676383678244 10.1002/tpg2.20333 NA NA t3827.T003162 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 2686723 1.6e-08 10.1002/tpg2.20333 NA NA t3827.T003163 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 2686723 8.07386696603243 10.1002/tpg2.20333 NA NA t3827.T003164 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 2716869 3.92647758826054 10.1002/tpg2.20333 NA NA t3827.T003165 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 2768844 1.89921534712509 10.1002/tpg2.20333 NA NA t3827.T003166 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 2768844 7.5864392958702e 10.1002/tpg2.20333 NA NA t3827.T003167 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 2780669 8.29706001211158 10.1002/tpg2.20333 NA NA t3827.T003168 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 2827984 1.08369260360198 10.1002/tpg2.20333 NA NA t3827.T003169 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 2827984 1.36676012609773 10.1002/tpg2.20333 NA NA t3827.T003170 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 2847077 1.19346899988866 10.1002/tpg2.20333 NA NA t3827.T003171 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 2847077 7.92628141756895 10.1002/tpg2.20333 NA NA t3827.T003172 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 2894971 4.68180197802055 10.1002/tpg2.20333 NA NA t3827.T003173 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 2894971 6.58492027280002 10.1002/tpg2.20333 NA NA t3827.T003174 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 2911190 1.16849717770202 10.1002/tpg2.20333 NA NA t3827.T003175 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 2911190 3.10795345293503 10.1002/tpg2.20333 NA NA t3827.T003176 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 2927825 1.1e-08 10.1002/tpg2.20333 NA NA t3827.T003177 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3011407 1.41828165281934 10.1002/tpg2.20333 NA NA t3827.T003178 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3011407 6.01432536790299 10.1002/tpg2.20333 NA NA t3827.T003179 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3021640 1.36924423029324 10.1002/tpg2.20333 NA NA t3827.T003180 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3021640 1.86604633815749 10.1002/tpg2.20333 NA NA t3827.T003181 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3035455 6.80509189133775 10.1002/tpg2.20333 NA NA t3827.T003182 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3072638 6e-09 10.1002/tpg2.20333 NA NA t3827.T003183 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3072638 9.9299722588196e 10.1002/tpg2.20333 NA NA t3827.T003184 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3103714 2.93094694046894 10.1002/tpg2.20333 NA NA t3827.T003185 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3103714 8.87607882408208 10.1002/tpg2.20333 NA NA t3827.T003186 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3112503 8.7368935950353e 10.1002/tpg2.20333 NA NA t3827.T003187 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3124670 1.63097227558906 10.1002/tpg2.20333 NA NA t3827.T003188 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3124670 2.72937217262079 10.1002/tpg2.20333 NA NA t3827.T003189 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3133806 5.26327753785416 10.1002/tpg2.20333 NA NA t3827.T003190 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3133806 6.2857876373027e 10.1002/tpg2.20333 NA NA t3827.T003191 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3147092 1.55702600832594 10.1002/tpg2.20333 NA NA t3827.T003192 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3147092 5.70701534228783 10.1002/tpg2.20333 NA NA t3827.T003193 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3185473 2.71779109893769 10.1002/tpg2.20333 NA NA t3827.T003194 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3185473 7.35142535656876 10.1002/tpg2.20333 NA NA t3827.T003195 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3185714 2.13266976186765 10.1002/tpg2.20333 NA NA t3827.T003196 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3185714 2.7122706478692e 10.1002/tpg2.20333 NA NA t3827.T003197 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3265984 3.13308413239964 10.1002/tpg2.20333 NA NA t3827.T003198 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3469475 2.24620882673153 10.1002/tpg2.20333 NA NA t3827.T003199 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3469475 4.16509371875358 10.1002/tpg2.20333 NA NA t3827.T003200 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3609518 2.05627963689524 10.1002/tpg2.20333 NA NA t3827.T003201 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3609518 2.45353022590035 10.1002/tpg2.20333 NA NA t3827.T003202 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3609518 6.90994932092779 10.1002/tpg2.20333 NA NA t3827.T003203 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3639513 2.50622611539979 10.1002/tpg2.20333 NA NA t3827.T003204 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3639513 3.62873129780496 10.1002/tpg2.20333 NA NA t3827.T003205 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3639513 4.41319877303019 10.1002/tpg2.20333 NA NA t3827.T003206 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3725013 1.2619923761682e 10.1002/tpg2.20333 NA NA t3827.T003207 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3725013 6.63848195434317 10.1002/tpg2.20333 NA NA t3827.T003208 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3725013 7.7505105379521e 10.1002/tpg2.20333 NA NA t3827.T003209 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3750945 1.74920982285103 10.1002/tpg2.20333 NA NA t3827.T003210 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3750945 3.17123843485087 10.1002/tpg2.20333 NA NA t3827.T003211 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3812241 1.04769918133727 10.1002/tpg2.20333 NA NA t3827.T003212 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3812241 2e-09 10.1002/tpg2.20333 NA NA t3827.T003213 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3812241 6.63764833465004 10.1002/tpg2.20333 NA NA t3827.T003214 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3846484 1.61655022211827 10.1002/tpg2.20333 NA NA t3827.T003215 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3846484 2.54492792421635 10.1002/tpg2.20333 NA NA t3827.T003216 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3846484 6.8180585213161e 10.1002/tpg2.20333 NA NA t3827.T003217 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3851188 5e-09 10.1002/tpg2.20333 NA NA t3827.T003218 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3851188 6.55027996117176 10.1002/tpg2.20333 NA NA t3827.T003219 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3873355 1.17205878325462 10.1002/tpg2.20333 NA NA t3827.T003220 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3873355 1.82091942267198 10.1002/tpg2.20333 NA NA t3827.T003221 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3934561 3.22691823110286 10.1002/tpg2.20333 NA NA t3827.T003222 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 3934561 5.01524994977096 10.1002/tpg2.20333 NA NA t3827.T003223 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4029388 3.25665697645056 10.1002/tpg2.20333 NA NA t3827.T003224 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4029388 4.4614635642433e 10.1002/tpg2.20333 NA NA t3827.T003225 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4029388 5.48426055079587 10.1002/tpg2.20333 NA NA t3827.T003226 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4029792 1.34180752049169 10.1002/tpg2.20333 NA NA t3827.T003227 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4029792 1.94023545405233 10.1002/tpg2.20333 NA NA t3827.T003228 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4035189 1.15170497302928 10.1002/tpg2.20333 NA NA t3827.T003229 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4035189 1.95363326808462 10.1002/tpg2.20333 NA NA t3827.T003230 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4035189 6.18372126855533 10.1002/tpg2.20333 NA NA t3827.T003231 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4045723 1.73065789704835 10.1002/tpg2.20333 NA NA t3827.T003232 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4045723 2.06638907546402 10.1002/tpg2.20333 NA NA t3827.T003233 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4045723 4.94674222267738 10.1002/tpg2.20333 NA NA t3827.T003234 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4084347 9.7564437395647e 10.1002/tpg2.20333 NA NA t3827.T003235 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4106644 1.33540370736247 10.1002/tpg2.20333 NA NA t3827.T003236 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4106644 1.54062245567605 10.1002/tpg2.20333 NA NA t3827.T003237 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4106644 4.47306097414805 10.1002/tpg2.20333 NA NA t3827.T003238 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4118177 1.47110735958044 10.1002/tpg2.20333 NA NA t3827.T003239 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4118177 1e-09 10.1002/tpg2.20333 NA NA t3827.T003240 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4140056 6.44745606778531 10.1002/tpg2.20333 NA NA t3827.T003241 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4140056 8.06297539071559 10.1002/tpg2.20333 NA NA t3827.T003242 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4144853 3.90249639457273 10.1002/tpg2.20333 NA NA t3827.T003243 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4144853 9.02060735174415 10.1002/tpg2.20333 NA NA t3827.T003244 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4144982 2.93976033548018 10.1002/tpg2.20333 NA NA t3827.T003245 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4144982 6.64840411394654 10.1002/tpg2.20333 NA NA t3827.T003246 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4178731 1.23366783516008 10.1002/tpg2.20333 NA NA t3827.T003247 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4178731 2.8654520094183e 10.1002/tpg2.20333 NA NA t3827.T003248 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4189078 3.91666063999141 10.1002/tpg2.20333 NA NA t3827.T003249 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4189078 5.43236159120696 10.1002/tpg2.20333 NA NA t3827.T003250 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4212539 1.9803663817045e 10.1002/tpg2.20333 NA NA t3827.T003251 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4212539 4.47711734350009 10.1002/tpg2.20333 NA NA t3827.T003252 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4212539 7.56946730197686 10.1002/tpg2.20333 NA NA t3827.T003253 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4213573 1.06436643925992 10.1002/tpg2.20333 NA NA t3827.T003254 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4213573 2.57199006702599 10.1002/tpg2.20333 NA NA t3827.T003255 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4216460 1.92309957985719 10.1002/tpg2.20333 NA NA t3827.T003256 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4216460 6.30928508794134 10.1002/tpg2.20333 NA NA t3827.T003257 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4235453 2.46628060264661 10.1002/tpg2.20333 NA NA t3827.T003258 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4235453 3.04390379008652 10.1002/tpg2.20333 NA NA t3827.T003259 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4269805 1.01308328380563 10.1002/tpg2.20333 NA NA t3827.T003260 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4269805 5.37524839023398 10.1002/tpg2.20333 NA NA t3827.T003261 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4269805 8.4560804504845e 10.1002/tpg2.20333 NA NA t3827.T003262 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4347373 5.87606682151487 10.1002/tpg2.20333 NA NA t3827.T003263 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4347373 9.8e-08 10.1002/tpg2.20333 NA NA t3827.T003264 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4451955 3.17656361838853 10.1002/tpg2.20333 NA NA t3827.T003265 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4504367 1.30540909884333 10.1002/tpg2.20333 NA NA t3827.T003266 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4560133 1.06357478929625 10.1002/tpg2.20333 NA NA t3827.T003267 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4561534 1.3e-08 10.1002/tpg2.20333 NA NA t3827.T003268 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4561534 3.51840130341845 10.1002/tpg2.20333 NA NA t3827.T003269 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4561534 5.62166470154272 10.1002/tpg2.20333 NA NA t3827.T003270 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4590176 2.37359061354269 10.1002/tpg2.20333 NA NA t3827.T003271 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4602179 9.07364534325783 10.1002/tpg2.20333 NA NA t3827.T003272 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 4611043 8.63813788550176 10.1002/tpg2.20333 NA NA t3827.T003273 3 Harvest Index GWAS MAGIC lines F7 NA 0 0 0 0 5166666 1.0292731788775e 10.1002/tpg2.20333 NA NA t3827.T003274 Ca8_4123449 3 Harvest index (%) Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 36.146 10.1002/tpg2.20333 NA NA t3827.T003275 3 Number of Pods per Plant Cross C (PBG7 x BS 100E) BC2F2 and BC2F3 NA 0 0 0 0 10.3389/fgene.2022.847647 NA NA t3827.T003276 3 Number of Seeds per Plant Cross C (PBG7 x BS 100E) BC2F2 and BC2F3 NA 0 0 0 0 10.3389/fgene.2022.847647 NA NA t3827.T003277 3 Seed Number Fine Mapping Heterogenous Inbred Families (HIFs) NA 0 0 0 0 10.3389/fpls.2022.829566 NA NA t3827.T003278 3 Seed Number Phenotyping Near Isogenic Lines (NILs) NA 0 0 0 0 10.3389/fpls.2022.829566 NA NA t3827.T003279 3 Seed Size Fine Mapping Heterogenous Inbred Families (HIFs) NA 0 0 0 0 10.3389/fpls.2022.829566 NA NA t3827.T003280 3 Seed Weight (SW) Phenotyping Near Isogenic Lines (NILs) NA 0 0 0 0 10.3389/fpls.2022.829566 NA NA t3827.T003281 3 Seed Weight per Plant (SWP) MLM (K+Q) Chickpea accessions NA 0 0 0 0 0.04 10.3390/biom13121722 NA NA t3827.T003282 3 Seed Weight per Plant (SWP) MLM (K+Q) Chickpea accessions NA 0 0 0 0 0.046 10.3390/biom13121722 NA NA t3827.T003283 3 Seed Weight per Plant (SWP) MLM (K+Q) Chickpea accessions NA 0 0 0 0 0.05 10.3390/biom13121722 NA NA t3827.T003284 3 Seed Yield per Plant (g) Cross C (PBG7 x BS 100E) BC2F2 and BC2F3 NA 0 0 0 0 10.3389/fgene.2022.847647 NA NA t3827.T003285 3 Total Biomass (TBM) Phenotyping Near Isogenic Lines (NILs) NA 0 0 0 0 10.3389/fpls.2022.829566 NA NA t3827.T003286 3 Yeild (per hectare) Phenotypic screening and Marker MABC lines BC3F3 progenies NA 0 0 0 0 10.3389/fgene.2022.924287 NA NA t3827.T003287 3 Yield (t/ha) (Yd) MLM (K+Q) Chickpea accessions NA 0 0 0 0 0.033 10.3390/biom13121722 NA NA t3827.T003288 3 Yield (t/ha) (Yd) MLM (K+Q) Chickpea accessions NA 0 0 0 0 0.034 10.3390/biom13121722 NA NA t3827.T003289 qyld-01 3 Yield per Plant (gm) (YLD) Composite Interval Mapping (CIM) RILs F8 CNC_021163.1.33772884 NA 0 0 CNC_021163.1.30731371 0 0 4.41 10.3389/fgene.2022.953898 NA NA t3827.T003290 qyld-01 3 Yield per Plant (gm) (YLD) Composite Interval Mapping (CIM) RILs F8 CNC_021165.1.21676871 NA 0 0 CNC_021165.1.32146805 0 0 3.11 10.3389/fgene.2022.953898 NA NA t3827.T003291 qyld-02 3 Yield per Plant (gm) (YLD) Composite Interval Mapping (CIM) RILs F8 CNC_021163.1.30731371 NA 0 0 CNC_021163.1.30731330 0 0 4.33 10.3389/fgene.2022.953898 NA NA t3827.T003292 qyld-03 3 Yield per Plant (gm) (YLD) Composite Interval Mapping (CIM) RILs F8 CNC_021163.1.11351447 NA 0 0 CNC_021163.1.12812015 0 0 3.56 10.3389/fgene.2022.953898 NA NA t3827.T003293 qyld-04 3 Yield per Plant (gm) (YLD) Composite Interval Mapping (CIM) RILs F8 CNC_021163.1.12812016 NA 0 0 CNC_021163.1.12811959 0 0 3.55 10.3389/fgene.2022.953898 NA NA t3827.T003294 qyld-05 3 Yield per Plant (gm) (YLD) Composite Interval Mapping (CIM) RILs F8 CNC_021166.1.23023466 NA 0 0 CNC_021166.1.17171266 0 0 3.42 10.3389/fgene.2022.953898 NA NA t3827.T003295 qYLD1.1 3 Yield Under Drought (YLD) Genome-Wide Composite Interval M RILs F11 S1_36014093 NA 0 0 S1_37647656 0 0 110 5.99 10.1038/s41598-023-44990-y NA NA t3827.T003296 qYLD1.1 3 Yield Under Drought (YLD) Genome-Wide Composite Interval M RILs F11 S1_36014093 NA 0 0 S1_37647656 0 0 110 6.38 10.1038/s41598-023-44990-y NA NA t3827.T003297 qYLD1.1 3 Yield Under Drought (YLD) Genome-Wide Composite Interval M RILs F11 S1_36014093 NA 0 0 S1_37647656 0 0 110 6.56 10.1038/s41598-023-44990-y NA NA t3827.T003298 qYLD1.1 3 Yield Under Drought (YLD) Genome-Wide Composite Interval M RILs F11 S1_36014093 NA 0 0 S1_37647656 0 0 110 7.85 10.1038/s41598-023-44990-y NA NA t3827.T003299 qYLD5.1 3 Yield Under Drought (YLD) Genome-Wide Composite Interval M RILs F11 S5_25697492 NA 0 0 S5_25697492 0 0 77.09 3.1 10.1038/s41598-023-44990-y NA NA t3827.T003300 qYLD5.2 3 Yield Under Drought (YLD) Genome-Wide Composite Interval M RILs F11 S5_28583402 NA 0 0 S5_28583402 0 0 85.75 3.51 10.1038/s41598-023-44990-y NA NA t3827.T003301 qYLD5.2 3 Yield Under Drought (YLD) Genome-Wide Composite Interval M RILs F11 S5_28583402 NA 0 0 S5_28583402 0 0 85.75 3.79 10.1038/s41598-023-44990-y NA NA t3827.T003302 qYLD5.2 3 Yield Under Drought (YLD) Genome-Wide Composite Interval M RILs F11 S5_28583402 NA 0 0 S5_28583402 0 0 85.75 3.84 10.1038/s41598-023-44990-y NA NA t3827.T003303 qYLD5.2 3 Yield Under Drought (YLD) Genome-Wide Composite Interval M RILs F11 S5_28583402 NA 0 0 S5_28583402 0 0 85.75 4.39 10.1038/s41598-023-44990-y NA NA t3827.T003304 qYLD6.1 3 Yield Under Drought (YLD) Genome-Wide Composite Interval M RILs F11 S6_15544854 NA 0 0 S6_15544854 0 0 46.63 2.61 10.1038/s41598-023-44990-y NA NA t3827.T003305 qYLD7.1 3 Yield Under Drought (YLD) Genome-Wide Composite Interval M RILs F11 S7_610723 NA 0 0 S7_2360523 0 0 4.8 2.69 10.1038/s41598-023-44990-y NA NA t3827.T003306 qYLD7.1 3 Yield Under Drought (YLD) Genome-Wide Composite Interval M RILs F11 S7_610723 NA 0 0 S7_2360523 0 0 4.8 2.88 10.1038/s41598-023-44990-y NA NA t3827.T003307 qYLD7.1 3 Yield Under Drought (YLD) Genome-Wide Composite Interval M RILs F11 S7_610723 NA 0 0 S7_2360523 0 0 4.8 4.1 10.1038/s41598-023-44990-y NA NA t3827.T003308 qYLD7.2 3 Yield Under Drought (YLD) Genome-Wide Composite Interval M RILs F11 S7_21616294 NA 0 0 S7_21616294 0 0 64.85 2.55 10.1038/s41598-023-44990-y NA NA t3827.T003309 4 Dates to Maturity Cross C (PBG7 x BS 100E) BC2F2 and BC2F3 NA 0 0 0 0 10.3389/fgene.2022.847647 NA NA t3827.T003310 qdhf-01 4 Days to 100% Flowering (DHF) Composite Interval Mapping (CIM) RILs F8 CNC_021161.1.9957038 NA 0 0 CNC_021161.1.3423481 0 0 4 10.3389/fgene.2022.953898 NA NA t3827.T003311 qdhf-01 4 Days to 100% Flowering (DHF) Composite Interval Mapping (CIM) RILs F8 CNC_021163.1.27315241 NA 0 0 CNC_021163.1.38343874 0 0 4.71 10.3389/fgene.2022.953898 NA NA t3827.T003312 qdhf-02 4 Days to 100% Flowering (DHF) Composite Interval Mapping (CIM) RILs F8 CNC_021163.1.11351447 NA 0 0 CNC_021163.1.12812015 0 0 3.4 10.3389/fgene.2022.953898 NA NA t3827.T003313 qdhf-02 4 Days to 100% Flowering (DHF) Composite Interval Mapping (CIM) RILs F8 CNC_021163.1.29661315 NA 0 0 CNC_021163.1.29493473 0 0 3.86 10.3389/fgene.2022.953898 NA NA t3827.T003314 qdhf-03 4 Days to 100% Flowering (DHF) Composite Interval Mapping (CIM) RILs F8 CNC_021163.1.11351447 NA 0 0 CNC_021163.1.12812015 0 0 5.65 10.3389/fgene.2022.953898 NA NA t3827.T003315 qdhf-04 4 Days to 100% Flowering (DHF) Composite Interval Mapping (CIM) RILs F8 CNC_021165.1.18056125 NA 0 0 CNC_021165.1.513801 0 0 3.98 10.3389/fgene.2022.953898 NA NA t3827.T003316 4 Days to 50% flowering Cross C (PBG7 x BS 100E) BC2F2 and BC2F3 NA 0 0 0 0 10.3389/fgene.2022.847647 NA NA t3827.T003317 Ca1_43251792 4 Days to 50% flowering Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 145.912 10.1002/tpg2.20333 NA NA t3827.T003318 Ca2_28110545 4 Days to 50% flowering Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 64.775 10.1002/tpg2.20333 NA NA t3827.T003319 Ca2_32077608 4 Days to 50% flowering Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 71.286 10.1002/tpg2.20333 NA NA t3827.T003320 Ca3_22180448 4 Days to 50% flowering Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 13.862 10.1002/tpg2.20333 NA NA t3827.T003321 Ca6_8281762 4 Days to 50% flowering Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 62.683 10.1002/tpg2.20333 NA NA t3827.T003322 Ca8_4123449 4 Days to 50% flowering Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 36.146 10.1002/tpg2.20333 NA NA t3827.T003323 Ca8_4123449 4 Days to 50% flowering Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 36.146 10.1002/tpg2.20333 NA NA t3827.T003324 4 Days to 50% flowering (DFF) Phenotypic screening and Marker MABC lines BC3F3 progenies NA 0 0 0 0 10.3389/fgene.2022.924287 NA NA t3827.T003325 qdff-01 4 Days to 50% Flowering (DFF) Composite Interval Mapping (CIM) RILs F8 CNC_021161.1.9957038 NA 0 0 CNC_021161.1.3423481 0 0 4.16 10.3389/fgene.2022.953898 NA NA t3827.T003326 qdff-01 4 Days to 50% Flowering (DFF) Composite Interval Mapping (CIM) RILs F8 CNC_021163.1.27315241 NA 0 0 CNC_021163.1.38343874 0 0 5.06 10.3389/fgene.2022.953898 NA NA t3827.T003327 qdff-02 4 Days to 50% Flowering (DFF) Composite Interval Mapping (CIM) RILs F8 CNC_021163.1.29661315 NA 0 0 CNC_021163.1.29493473 0 0 4.01 10.3389/fgene.2022.953898 NA NA t3827.T003328 qdff-02 4 Days to 50% Flowering (DFF) Composite Interval Mapping (CIM) RILs F8 CNC_021163.1.11351447 NA 0 0 CNC_021163.1.12812015 0 0 5.27 10.3389/fgene.2022.953898 NA NA t3827.T003329 qdff-03 4 Days to 50% Flowering (DFF) Composite Interval Mapping (CIM) RILs F8 CNC_021163.1.11351447 NA 0 0 CNC_021163.1.12812015 0 0 5.56 10.3389/fgene.2022.953898 NA NA t3827.T003330 qdff-03 4 Days to 50% Flowering (DFF) Composite Interval Mapping (CIM) RILs F8 CNC_021165.1.18056125 NA 0 0 CNC_021165.1.513801 0 0 3.22 10.3389/fgene.2022.953898 NA NA t3827.T003331 qdff-04 4 Days to 50% Flowering (DFF) Composite Interval Mapping (CIM) RILs F8 CNC_021165.1.36994104 NA 0 0 CNC_021165.1.17940395 0 0 3.08 10.3389/fgene.2022.953898 NA NA t3827.T003332 qdff-04 4 Days to 50% Flowering (DFF) Composite Interval Mapping (CIM) RILs F8 CNC_021165.1.18056125 NA 0 0 CNC_021165.1.513801 0 0 3.97 10.3389/fgene.2022.953898 NA NA t3827.T003333 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 2291724 4.83310139160674 10.1002/tpg2.20333 NA NA t3827.T003334 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 2291724 8.93843419112303 10.1002/tpg2.20333 NA NA t3827.T003335 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 2546836 1.23289247721966 10.1002/tpg2.20333 NA NA t3827.T003336 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 2546836 6.88424354079121 10.1002/tpg2.20333 NA NA t3827.T003337 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 2546836 7.79350922340269 10.1002/tpg2.20333 NA NA t3827.T003338 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 2716869 4.26451723087665 10.1002/tpg2.20333 NA NA t3827.T003339 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 2744401 1.2054215897473e 10.1002/tpg2.20333 NA NA t3827.T003340 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 2744401 2.5203740977974e 10.1002/tpg2.20333 NA NA t3827.T003341 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 2744401 6.41326745734756 10.1002/tpg2.20333 NA NA t3827.T003342 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 2768844 2.71393313781278 10.1002/tpg2.20333 NA NA t3827.T003343 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 2780669 3e-08 10.1002/tpg2.20333 NA NA t3827.T003344 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 2827984 1.55573606559322 10.1002/tpg2.20333 NA NA t3827.T003345 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 2827984 9.87950303288276 10.1002/tpg2.20333 NA NA t3827.T003346 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 2847077 6.17310423717824 10.1002/tpg2.20333 NA NA t3827.T003347 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 2911190 1.85608038492001 10.1002/tpg2.20333 NA NA t3827.T003348 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 2911190 1.87432806728918 10.1002/tpg2.20333 NA NA t3827.T003349 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 2911190 6.20677861797556 10.1002/tpg2.20333 NA NA t3827.T003350 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 2927825 2.47929526899889 10.1002/tpg2.20333 NA NA t3827.T003351 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 2927825 2.87209422226746 10.1002/tpg2.20333 NA NA t3827.T003352 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 2927825 5.89081731308823 10.1002/tpg2.20333 NA NA t3827.T003353 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3011407 1.93976868971463 10.1002/tpg2.20333 NA NA t3827.T003354 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3011407 3.04791450488642 10.1002/tpg2.20333 NA NA t3827.T003355 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3011407 9.1271042454158e 10.1002/tpg2.20333 NA NA t3827.T003356 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3021640 5.38509073927666 10.1002/tpg2.20333 NA NA t3827.T003357 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3021640 6.23011907447675 10.1002/tpg2.20333 NA NA t3827.T003358 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3021640 6.4652750227198e 10.1002/tpg2.20333 NA NA t3827.T003359 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3035455 3.94966455102695 10.1002/tpg2.20333 NA NA t3827.T003360 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3115157 3.20545118789906 10.1002/tpg2.20333 NA NA t3827.T003361 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3115157 5.67877820811975 10.1002/tpg2.20333 NA NA t3827.T003362 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3115157 8.01978130609436 10.1002/tpg2.20333 NA NA t3827.T003363 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3124670 1.93928918139107 10.1002/tpg2.20333 NA NA t3827.T003364 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3124670 9.04873033903291 10.1002/tpg2.20333 NA NA t3827.T003365 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3133806 4.37037338928841 10.1002/tpg2.20333 NA NA t3827.T003366 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3133806 8.87073704934493 10.1002/tpg2.20333 NA NA t3827.T003367 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3147092 1.82665828838011 10.1002/tpg2.20333 NA NA t3827.T003368 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3147092 1e-09 10.1002/tpg2.20333 NA NA t3827.T003369 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3185473 1.3115017998782e 10.1002/tpg2.20333 NA NA t3827.T003370 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3185473 2.43293555726761 10.1002/tpg2.20333 NA NA t3827.T003371 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3185714 2.59217093876624 10.1002/tpg2.20333 NA NA t3827.T003372 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3185714 6.40240595932137 10.1002/tpg2.20333 NA NA t3827.T003373 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3265984 1.37787747765808 10.1002/tpg2.20333 NA NA t3827.T003374 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3265984 6.54707755675681 10.1002/tpg2.20333 NA NA t3827.T003375 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3370441 1.91245077076505 10.1002/tpg2.20333 NA NA t3827.T003376 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3370441 4.38092944246199 10.1002/tpg2.20333 NA NA t3827.T003377 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3469475 1.68825509578176 10.1002/tpg2.20333 NA NA t3827.T003378 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3469475 2.31031828682943 10.1002/tpg2.20333 NA NA t3827.T003379 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3609518 1.11668486040239 10.1002/tpg2.20333 NA NA t3827.T003380 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3609518 1.70763609139625 10.1002/tpg2.20333 NA NA t3827.T003381 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3609518 5.0392521945063e 10.1002/tpg2.20333 NA NA t3827.T003382 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3639513 2.17432713252398 10.1002/tpg2.20333 NA NA t3827.T003383 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3639513 2.48346056784801 10.1002/tpg2.20333 NA NA t3827.T003384 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3676327 1.59966685453042 10.1002/tpg2.20333 NA NA t3827.T003385 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3676327 3.3538498210381e 10.1002/tpg2.20333 NA NA t3827.T003386 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3725013 2.39975082544801 10.1002/tpg2.20333 NA NA t3827.T003387 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3725013 4.32610298685929 10.1002/tpg2.20333 NA NA t3827.T003388 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3725013 4.61339889438154 10.1002/tpg2.20333 NA NA t3827.T003389 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3750945 1.35239360215165 10.1002/tpg2.20333 NA NA t3827.T003390 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3750945 1.51474083576692 10.1002/tpg2.20333 NA NA t3827.T003391 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3750945 2.48167199190423 10.1002/tpg2.20333 NA NA t3827.T003392 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3812241 2.14132497798248 10.1002/tpg2.20333 NA NA t3827.T003393 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3812241 2.45300557793338 10.1002/tpg2.20333 NA NA t3827.T003394 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3812241 5.99033236748595 10.1002/tpg2.20333 NA NA t3827.T003395 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3846484 1.1103418814729e 10.1002/tpg2.20333 NA NA t3827.T003396 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3846484 1.6174805030719e 10.1002/tpg2.20333 NA NA t3827.T003397 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3846484 2.46627149369837 10.1002/tpg2.20333 NA NA t3827.T003398 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3851188 1.23862929940857 10.1002/tpg2.20333 NA NA t3827.T003399 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3851188 4.01882258385514 10.1002/tpg2.20333 NA NA t3827.T003400 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3851188 9.21816917866311 10.1002/tpg2.20333 NA NA t3827.T003401 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3873355 1.61154913098583 10.1002/tpg2.20333 NA NA t3827.T003402 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3873355 1.88233347855956 10.1002/tpg2.20333 NA NA t3827.T003403 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3873355 4.40490229096893 10.1002/tpg2.20333 NA NA t3827.T003404 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3934561 1.2283714525588e 10.1002/tpg2.20333 NA NA t3827.T003405 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3934561 2.34858549808939 10.1002/tpg2.20333 NA NA t3827.T003406 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 3934561 3.68107673529946 10.1002/tpg2.20333 NA NA t3827.T003407 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4029388 1.49356736163446 10.1002/tpg2.20333 NA NA t3827.T003408 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4029388 1.79768019744445 10.1002/tpg2.20333 NA NA t3827.T003409 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4029388 7.95496572925113 10.1002/tpg2.20333 NA NA t3827.T003410 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4029792 7.65025122931788 10.1002/tpg2.20333 NA NA t3827.T003411 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4029792 7.78413383870043 10.1002/tpg2.20333 NA NA t3827.T003412 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4029792 8.08620954628026 10.1002/tpg2.20333 NA NA t3827.T003413 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4035189 2.48042376725182 10.1002/tpg2.20333 NA NA t3827.T003414 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4035189 3.99104247593099 10.1002/tpg2.20333 NA NA t3827.T003415 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4035189 4.48072884021631 10.1002/tpg2.20333 NA NA t3827.T003416 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4045723 1.15259372136071 10.1002/tpg2.20333 NA NA t3827.T003417 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4045723 5.4252144776529e 10.1002/tpg2.20333 NA NA t3827.T003418 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4045723 9.98970149708703 10.1002/tpg2.20333 NA NA t3827.T003419 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4084347 1.20680084365171 10.1002/tpg2.20333 NA NA t3827.T003420 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4084347 1.24223401385101 10.1002/tpg2.20333 NA NA t3827.T003421 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4084347 5.22062641604645 10.1002/tpg2.20333 NA NA t3827.T003422 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4106644 1.20674341763698 10.1002/tpg2.20333 NA NA t3827.T003423 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4106644 2.62510185016943 10.1002/tpg2.20333 NA NA t3827.T003424 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4106644 2.7416926360579e 10.1002/tpg2.20333 NA NA t3827.T003425 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4111438 1.4756371067826e 10.1002/tpg2.20333 NA NA t3827.T003426 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4111438 2.06615478928652 10.1002/tpg2.20333 NA NA t3827.T003427 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4111438 3.91300030314731 10.1002/tpg2.20333 NA NA t3827.T003428 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4118177 1.76005820896798 10.1002/tpg2.20333 NA NA t3827.T003429 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4118177 2.02884900879463 10.1002/tpg2.20333 NA NA t3827.T003430 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4118177 8.67286945325071 10.1002/tpg2.20333 NA NA t3827.T003431 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4140056 3.66033304535416 10.1002/tpg2.20333 NA NA t3827.T003432 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4140056 5.59831049460399 10.1002/tpg2.20333 NA NA t3827.T003433 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4140056 6.30812066984964 10.1002/tpg2.20333 NA NA t3827.T003434 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4144853 1.08873308308518 10.1002/tpg2.20333 NA NA t3827.T003435 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4144853 1.17150615396444 10.1002/tpg2.20333 NA NA t3827.T003436 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4144853 1.76806841207807 10.1002/tpg2.20333 NA NA t3827.T003437 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4144982 1.29371173102755 10.1002/tpg2.20333 NA NA t3827.T003438 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4144982 2.5906221532942e 10.1002/tpg2.20333 NA NA t3827.T003439 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4144982 2.63603005580795 10.1002/tpg2.20333 NA NA t3827.T003440 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4178731 1.47085385731912 10.1002/tpg2.20333 NA NA t3827.T003441 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4178731 1.5756839174699e 10.1002/tpg2.20333 NA NA t3827.T003442 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4178731 1.78216339879865 10.1002/tpg2.20333 NA NA t3827.T003443 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4189078 1.68084044913609 10.1002/tpg2.20333 NA NA t3827.T003444 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4189078 3.8482263329036e 10.1002/tpg2.20333 NA NA t3827.T003445 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4189078 9.11789171004816 10.1002/tpg2.20333 NA NA t3827.T003446 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4212539 1.19094957333136 10.1002/tpg2.20333 NA NA t3827.T003447 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4212539 4.1637289331113e 10.1002/tpg2.20333 NA NA t3827.T003448 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4212539 6.76768632614575 10.1002/tpg2.20333 NA NA t3827.T003449 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4213573 1.08816162959975 10.1002/tpg2.20333 NA NA t3827.T003450 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4213573 4.49747461343203 10.1002/tpg2.20333 NA NA t3827.T003451 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4213573 7.69206060423755 10.1002/tpg2.20333 NA NA t3827.T003452 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4216460 1.67916405698493 10.1002/tpg2.20333 NA NA t3827.T003453 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4216460 1.8316099712085e 10.1002/tpg2.20333 NA NA t3827.T003454 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4216460 4.46250002852398 10.1002/tpg2.20333 NA NA t3827.T003455 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4235453 1.77230668814963 10.1002/tpg2.20333 NA NA t3827.T003456 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4235453 6.2420469823795e 10.1002/tpg2.20333 NA NA t3827.T003457 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4235453 8.77008561994377 10.1002/tpg2.20333 NA NA t3827.T003458 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4269805 1.24482091580328 10.1002/tpg2.20333 NA NA t3827.T003459 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4269805 1.68165734416258 10.1002/tpg2.20333 NA NA t3827.T003460 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4269805 2.68151977037475 10.1002/tpg2.20333 NA NA t3827.T003461 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4297025 2.22648520777097 10.1002/tpg2.20333 NA NA t3827.T003462 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4297025 4.54824754827836 10.1002/tpg2.20333 NA NA t3827.T003463 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4297025 5.21710227845057 10.1002/tpg2.20333 NA NA t3827.T003464 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4311705 2.34767108329743 10.1002/tpg2.20333 NA NA t3827.T003465 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4311705 4.39137833836067 10.1002/tpg2.20333 NA NA t3827.T003466 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4311705 8.69964790589895 10.1002/tpg2.20333 NA NA t3827.T003467 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4347373 1.48259120198151 10.1002/tpg2.20333 NA NA t3827.T003468 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4347373 2.73806019178953 10.1002/tpg2.20333 NA NA t3827.T003469 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4347373 6.55802646146626 10.1002/tpg2.20333 NA NA t3827.T003470 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4439745 2.1e-08 10.1002/tpg2.20333 NA NA t3827.T003471 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4451955 5.43102556112536 10.1002/tpg2.20333 NA NA t3827.T003472 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4451955 5.68883326744124 10.1002/tpg2.20333 NA NA t3827.T003473 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4504367 2.09679097074812 10.1002/tpg2.20333 NA NA t3827.T003474 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4504367 6.39948463694141 10.1002/tpg2.20333 NA NA t3827.T003475 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4504367 6.80100474492564 10.1002/tpg2.20333 NA NA t3827.T003476 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4560133 1.58783301166636 10.1002/tpg2.20333 NA NA t3827.T003477 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4560133 2.00515966258786 10.1002/tpg2.20333 NA NA t3827.T003478 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4560133 6.42668938934093 10.1002/tpg2.20333 NA NA t3827.T003479 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4560371 2.32710471330566 10.1002/tpg2.20333 NA NA t3827.T003480 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4560371 2.92653042648619 10.1002/tpg2.20333 NA NA t3827.T003481 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4561534 1.23476223460859 10.1002/tpg2.20333 NA NA t3827.T003482 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4561534 1.31505620073404 10.1002/tpg2.20333 NA NA t3827.T003483 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4561534 9.30563665362782 10.1002/tpg2.20333 NA NA t3827.T003484 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4590062 1.57466183361077 10.1002/tpg2.20333 NA NA t3827.T003485 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4590062 3.5426033203378e 10.1002/tpg2.20333 NA NA t3827.T003486 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4602179 4.29333984518095 10.1002/tpg2.20333 NA NA t3827.T003487 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4602179 4.57792318018355 10.1002/tpg2.20333 NA NA t3827.T003488 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4611043 1.78973572337644 10.1002/tpg2.20333 NA NA t3827.T003489 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4611043 2.41333396757163 10.1002/tpg2.20333 NA NA t3827.T003490 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4636916 5.23547566485083 10.1002/tpg2.20333 NA NA t3827.T003491 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4641743 1e-09 10.1002/tpg2.20333 NA NA t3827.T003492 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4641743 6.6e-08 10.1002/tpg2.20333 NA NA t3827.T003493 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4641743 8.96565451852989 10.1002/tpg2.20333 NA NA t3827.T003494 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4751090 2.19397382813625 10.1002/tpg2.20333 NA NA t3827.T003495 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4764769 2.17048859010699 10.1002/tpg2.20333 NA NA t3827.T003496 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4764769 7.9517180116072e 10.1002/tpg2.20333 NA NA t3827.T003497 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4764769 9.35361246409956 10.1002/tpg2.20333 NA NA t3827.T003498 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4797392 1.50843104948686 10.1002/tpg2.20333 NA NA t3827.T003499 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4797392 2.63612235787401 10.1002/tpg2.20333 NA NA t3827.T003500 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4797392 9.40855277930193 10.1002/tpg2.20333 NA NA t3827.T003501 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4797656 1.02938472007507 10.1002/tpg2.20333 NA NA t3827.T003502 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4797656 1.0308522964338e 10.1002/tpg2.20333 NA NA t3827.T003503 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4797656 1.37983661375735 10.1002/tpg2.20333 NA NA t3827.T003504 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4880121 1.77921063497507 10.1002/tpg2.20333 NA NA t3827.T003505 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4880121 2.46225733493336 10.1002/tpg2.20333 NA NA t3827.T003506 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4904014 3.09513189622805 10.1002/tpg2.20333 NA NA t3827.T003507 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4904014 9.2e-08 10.1002/tpg2.20333 NA NA t3827.T003508 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 4914394 4.17173140624018 10.1002/tpg2.20333 NA NA t3827.T003509 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 5010251 1.2e-08 10.1002/tpg2.20333 NA NA t3827.T003510 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 5010251 1.65723419571904 10.1002/tpg2.20333 NA NA t3827.T003511 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 5012565 9.30452717186132 10.1002/tpg2.20333 NA NA t3827.T003512 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 5063665 6.80715988165818 10.1002/tpg2.20333 NA NA t3827.T003513 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 5073590 4.27267942924873 10.1002/tpg2.20333 NA NA t3827.T003514 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 5079233 8.61679222220866 10.1002/tpg2.20333 NA NA t3827.T003515 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 5079434 7.33425052717992 10.1002/tpg2.20333 NA NA t3827.T003516 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 5082607 2.41514961327772 10.1002/tpg2.20333 NA NA t3827.T003517 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 5094699 6.6e-08 10.1002/tpg2.20333 NA NA t3827.T003518 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 5111950 9.50089199185657 10.1002/tpg2.20333 NA NA t3827.T003519 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 5116250 8.2e-08 10.1002/tpg2.20333 NA NA t3827.T003520 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 5130581 9.47730478023536 10.1002/tpg2.20333 NA NA t3827.T003521 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 5131770 2.50559894631771 10.1002/tpg2.20333 NA NA t3827.T003522 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 5133476 1.99734884085949 10.1002/tpg2.20333 NA NA t3827.T003523 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 5133476 3.17531708667271 10.1002/tpg2.20333 NA NA t3827.T003524 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 5133476 5.63974948582161 10.1002/tpg2.20333 NA NA t3827.T003525 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 5151969 1.19275429243975 10.1002/tpg2.20333 NA NA t3827.T003526 4 Days to 50% floweting GWAS MAGIC lines F7 NA 0 0 0 0 5294843 4.84948268663987 10.1002/tpg2.20333 NA NA t3827.T003527 4 Days to flowering (DTF) Phenotyping Near Isogenic Lines (NILs) NA 0 0 0 0 10.3389/fpls.2022.829566 NA NA t3827.T003528 qdfi-01 4 Days to Flowering Initiation (DFI) Composite Interval Mapping (CIM) RILs F8 CNC_021161.1.9957038 NA 0 0 CNC_021161.1.3423481 0 0 4.48 10.3389/fgene.2022.953898 NA NA t3827.T003529 qdfi-01 4 Days to Flowering Initiation (DFI) Composite Interval Mapping (CIM) RILs F8 CNC_021163.1.11351447 NA 0 0 CNC_021163.1.12812015 0 0 6.85 10.3389/fgene.2022.953898 NA NA t3827.T003530 qdfi-02 4 Days to Flowering Initiation (DFI) Composite Interval Mapping (CIM) RILs F8 CNC_021163.1.29661315 NA 0 0 CNC_021163.1.29493473 0 0 4.16 10.3389/fgene.2022.953898 NA NA t3827.T003531 qdfi-02 4 Days to Flowering Initiation (DFI) Composite Interval Mapping (CIM) RILs F8 CNC_021165.1.18056125 NA 0 0 CNC_021165.1.513801 0 0 3.29 10.3389/fgene.2022.953898 NA NA t3827.T003532 qdfi-03 4 Days to Flowering Initiation (DFI) Composite Interval Mapping (CIM) RILs F8 CNC_021163.1.11351447 NA 0 0 CNC_021163.1.12812015 0 0 5.15 10.3389/fgene.2022.953898 NA NA t3827.T003533 qdfi-04 4 Days to Flowering Initiation (DFI) Composite Interval Mapping (CIM) RILs F8 CNC_021165.1.18056125 NA 0 0 CNC_021165.1.513801 0 0 4.12 10.3389/fgene.2022.953898 NA NA t3827.T003534 qdg-01 4 Days to Germination (DG) Composite Interval Mapping (CIM) RILs F8 CNC_021161.1.17610977 NA 0 0 CNC_021161.1.36182232 0 0 3.66 10.3389/fgene.2022.953898 NA NA t3827.T003535 qdg-01 4 Days to Germination (DG) Composite Interval Mapping (CIM) RILs F8 CNC_021165.1.18056125 NA 0 0 CNC_021165.1.513801 0 0 4.77 10.3389/fgene.2022.953898 NA NA t3827.T003536 qdg-02 4 Days to Germination (DG) Composite Interval Mapping (CIM) RILs F8 CNC_021166.1.34922231 NA 0 0 CNC_021166.1.15786786 0 0 4.53 10.3389/fgene.2022.953898 NA NA t3827.T003537 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 2182287 1.38268153810803 10.1002/tpg2.20333 NA NA t3827.T003538 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 2330116 5.44080273173126 10.1002/tpg2.20333 NA NA t3827.T003539 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 2399378 2.31987706883302 10.1002/tpg2.20333 NA NA t3827.T003540 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 2827984 2.1e-08 10.1002/tpg2.20333 NA NA t3827.T003541 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 2911190 3.10715653806508 10.1002/tpg2.20333 NA NA t3827.T003542 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3011407 6.77102643886954 10.1002/tpg2.20333 NA NA t3827.T003543 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3011407 9.91703757428075 10.1002/tpg2.20333 NA NA t3827.T003544 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3021640 5e-09 10.1002/tpg2.20333 NA NA t3827.T003545 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3103714 4.87927103804301 10.1002/tpg2.20333 NA NA t3827.T003546 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3115157 7.18538371108035 10.1002/tpg2.20333 NA NA t3827.T003547 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3124670 3.03033700165156 10.1002/tpg2.20333 NA NA t3827.T003548 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3133806 6.20278009480184 10.1002/tpg2.20333 NA NA t3827.T003549 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3147092 3.39060390617449 10.1002/tpg2.20333 NA NA t3827.T003550 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3185473 3.95229535319056 10.1002/tpg2.20333 NA NA t3827.T003551 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3185714 4.47582500334994 10.1002/tpg2.20333 NA NA t3827.T003552 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3265984 6.33900622988303 10.1002/tpg2.20333 NA NA t3827.T003553 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3370441 3.60458873082602 10.1002/tpg2.20333 NA NA t3827.T003554 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3469475 3.27229712424319 10.1002/tpg2.20333 NA NA t3827.T003555 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3609518 2.03116656406105 10.1002/tpg2.20333 NA NA t3827.T003556 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3609518 8.15406221424715 10.1002/tpg2.20333 NA NA t3827.T003557 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3639513 2.01588027040872 10.1002/tpg2.20333 NA NA t3827.T003558 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3676327 4.65602781330608 10.1002/tpg2.20333 NA NA t3827.T003559 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3725013 2.1e-08 10.1002/tpg2.20333 NA NA t3827.T003560 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3725013 3.73714287073002 10.1002/tpg2.20333 NA NA t3827.T003561 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3750945 3.45704513751217 10.1002/tpg2.20333 NA NA t3827.T003562 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3812241 1.11589489421536 10.1002/tpg2.20333 NA NA t3827.T003563 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3812241 3e-09 10.1002/tpg2.20333 NA NA t3827.T003564 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3846484 3e-08 10.1002/tpg2.20333 NA NA t3827.T003565 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3851188 2.77715931926931 10.1002/tpg2.20333 NA NA t3827.T003566 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3851188 4.65063899738334 10.1002/tpg2.20333 NA NA t3827.T003567 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3873355 2.26717176241633 10.1002/tpg2.20333 NA NA t3827.T003568 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3873355 7.57886641092087 10.1002/tpg2.20333 NA NA t3827.T003569 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 3934561 8.04763431627482 10.1002/tpg2.20333 NA NA t3827.T003570 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4029388 1.4470551069711e 10.1002/tpg2.20333 NA NA t3827.T003571 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4029792 1.03218049520091 10.1002/tpg2.20333 NA NA t3827.T003572 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4035189 2.26534424271837 10.1002/tpg2.20333 NA NA t3827.T003573 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4035189 4.02253945028412 10.1002/tpg2.20333 NA NA t3827.T003574 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4045723 1.5104403136752e 10.1002/tpg2.20333 NA NA t3827.T003575 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4045723 1.99161438770676 10.1002/tpg2.20333 NA NA t3827.T003576 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4084347 4.6067384299094e 10.1002/tpg2.20333 NA NA t3827.T003577 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4106644 4.45687659982489 10.1002/tpg2.20333 NA NA t3827.T003578 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4106644 8.36883570529825 10.1002/tpg2.20333 NA NA t3827.T003579 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4111438 2.01768662771167 10.1002/tpg2.20333 NA NA t3827.T003580 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4118177 1.80615857579431 10.1002/tpg2.20333 NA NA t3827.T003581 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4140056 4.61978991400158 10.1002/tpg2.20333 NA NA t3827.T003582 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4144853 1.90230653615792 10.1002/tpg2.20333 NA NA t3827.T003583 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4144982 2.15961341999946 10.1002/tpg2.20333 NA NA t3827.T003584 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4178731 1.81895425774325 10.1002/tpg2.20333 NA NA t3827.T003585 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4189078 5.89008757889772 10.1002/tpg2.20333 NA NA t3827.T003586 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4212539 1.73996682653523 10.1002/tpg2.20333 NA NA t3827.T003587 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4213573 5.42582737498486 10.1002/tpg2.20333 NA NA t3827.T003588 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4216460 5.4894893180707e 10.1002/tpg2.20333 NA NA t3827.T003589 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4235453 4.94108354553645 10.1002/tpg2.20333 NA NA t3827.T003590 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4269805 1.64756042030818 10.1002/tpg2.20333 NA NA t3827.T003591 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4297025 5.63927763640983 10.1002/tpg2.20333 NA NA t3827.T003592 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4311705 2.20613100643917 10.1002/tpg2.20333 NA NA t3827.T003593 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4347373 8.14363574658591 10.1002/tpg2.20333 NA NA t3827.T003594 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4451955 3.76041053628355 10.1002/tpg2.20333 NA NA t3827.T003595 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4504367 4.75450258807786 10.1002/tpg2.20333 NA NA t3827.T003596 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4560133 8.06176140620428 10.1002/tpg2.20333 NA NA t3827.T003597 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4560371 7.36401327969556 10.1002/tpg2.20333 NA NA t3827.T003598 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4561534 2.19038877978762 10.1002/tpg2.20333 NA NA t3827.T003599 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4590062 1.1070950529567e 10.1002/tpg2.20333 NA NA t3827.T003600 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4590176 4.27372352006647 10.1002/tpg2.20333 NA NA t3827.T003601 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4591437 5.8766037958516e 10.1002/tpg2.20333 NA NA t3827.T003602 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4602179 5.17482156678498 10.1002/tpg2.20333 NA NA t3827.T003603 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4611043 5.21933177366618 10.1002/tpg2.20333 NA NA t3827.T003604 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4636798 2.53321715930948 10.1002/tpg2.20333 NA NA t3827.T003605 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4641743 5.49252618072169 10.1002/tpg2.20333 NA NA t3827.T003606 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4659615 2.80956635467422 10.1002/tpg2.20333 NA NA t3827.T003607 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4751090 7.83981731669803 10.1002/tpg2.20333 NA NA t3827.T003608 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4764769 1e-09 10.1002/tpg2.20333 NA NA t3827.T003609 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4797392 3.73599936447534 10.1002/tpg2.20333 NA NA t3827.T003610 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4797656 1.4832589909929e 10.1002/tpg2.20333 NA NA t3827.T003611 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4864842 2.75239549522318 10.1002/tpg2.20333 NA NA t3827.T003612 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4880121 2.07624686619598 10.1002/tpg2.20333 NA NA t3827.T003613 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4904014 5.77627018479633 10.1002/tpg2.20333 NA NA t3827.T003614 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4906096 2.16643014445749 10.1002/tpg2.20333 NA NA t3827.T003615 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4906096 6.72482589992968 10.1002/tpg2.20333 NA NA t3827.T003616 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4914394 1e-09 10.1002/tpg2.20333 NA NA t3827.T003617 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4914394 4.94457133294663 10.1002/tpg2.20333 NA NA t3827.T003618 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4936936 4.43244662322044 10.1002/tpg2.20333 NA NA t3827.T003619 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 4938145 7.75679185640948 10.1002/tpg2.20333 NA NA t3827.T003620 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5010251 5.65832909351572 10.1002/tpg2.20333 NA NA t3827.T003621 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5012565 2.68939490536889 10.1002/tpg2.20333 NA NA t3827.T003622 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5012565 3.30969654705307 10.1002/tpg2.20333 NA NA t3827.T003623 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5063665 1.64354697822537 10.1002/tpg2.20333 NA NA t3827.T003624 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5063665 2.30739744130272 10.1002/tpg2.20333 NA NA t3827.T003625 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5073590 3.59209913718076 10.1002/tpg2.20333 NA NA t3827.T003626 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5079233 3.1258062728349e 10.1002/tpg2.20333 NA NA t3827.T003627 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5079434 5.1617398289899e 10.1002/tpg2.20333 NA NA t3827.T003628 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5082607 2.68973686092131 10.1002/tpg2.20333 NA NA t3827.T003629 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5094699 1.3671921291415e 10.1002/tpg2.20333 NA NA t3827.T003630 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5107214 8.91384817735841 10.1002/tpg2.20333 NA NA t3827.T003631 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5111950 3.73073322232794 10.1002/tpg2.20333 NA NA t3827.T003632 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5130368 1.01908717781074 10.1002/tpg2.20333 NA NA t3827.T003633 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5130368 4.26698102690997 10.1002/tpg2.20333 NA NA t3827.T003634 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5130581 7.0558011111761e 10.1002/tpg2.20333 NA NA t3827.T003635 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5131770 2.26183418613636 10.1002/tpg2.20333 NA NA t3827.T003636 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5131770 8.36720492124839 10.1002/tpg2.20333 NA NA t3827.T003637 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5133476 3.23948689972693 10.1002/tpg2.20333 NA NA t3827.T003638 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5151969 2.73657177814796 10.1002/tpg2.20333 NA NA t3827.T003639 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5208145 3.02282187642816 10.1002/tpg2.20333 NA NA t3827.T003640 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5247038 1.55056358026751 10.1002/tpg2.20333 NA NA t3827.T003641 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5255454 1.38653718934244 10.1002/tpg2.20333 NA NA t3827.T003642 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5255454 5.89446357500484 10.1002/tpg2.20333 NA NA t3827.T003643 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5256498 1e-08 10.1002/tpg2.20333 NA NA t3827.T003644 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5274910 4.14676023404685 10.1002/tpg2.20333 NA NA t3827.T003645 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5294843 3.06606743224104 10.1002/tpg2.20333 NA NA t3827.T003646 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5318565 3.04488569274626 10.1002/tpg2.20333 NA NA t3827.T003647 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5329964 1.06461165351434 10.1002/tpg2.20333 NA NA t3827.T003648 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5329964 2.86595613934445 10.1002/tpg2.20333 NA NA t3827.T003649 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5335228 3.74415838907369 10.1002/tpg2.20333 NA NA t3827.T003650 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5346652 1.72040828431477 10.1002/tpg2.20333 NA NA t3827.T003651 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5346652 8.69728458100682 10.1002/tpg2.20333 NA NA t3827.T003652 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5377367 5.558125638442e- 10.1002/tpg2.20333 NA NA t3827.T003653 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5377367 8.48739423558249 10.1002/tpg2.20333 NA NA t3827.T003654 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5447954 2.1068610099503e 10.1002/tpg2.20333 NA NA t3827.T003655 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5477262 2.63025489854588 10.1002/tpg2.20333 NA NA t3827.T003656 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5526937 3.30960464088048 10.1002/tpg2.20333 NA NA t3827.T003657 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5533542 7.87734326448517 10.1002/tpg2.20333 NA NA t3827.T003658 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5568205 7.45129139899094 10.1002/tpg2.20333 NA NA t3827.T003659 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5656774 1.64388757689238 10.1002/tpg2.20333 NA NA t3827.T003660 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5656774 9.4846081038256e 10.1002/tpg2.20333 NA NA t3827.T003661 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5662984 8.16915132840481 10.1002/tpg2.20333 NA NA t3827.T003662 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5688753 2.91201896351344 10.1002/tpg2.20333 NA NA t3827.T003663 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5703841 3.0689333682542e 10.1002/tpg2.20333 NA NA t3827.T003664 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5759086 6.41112481841688 10.1002/tpg2.20333 NA NA t3827.T003665 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5759086 7.54462141948104 10.1002/tpg2.20333 NA NA t3827.T003666 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5818240 1.89422989495438 10.1002/tpg2.20333 NA NA t3827.T003667 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5829967 4.15513136327639 10.1002/tpg2.20333 NA NA t3827.T003668 4 Days to maturity GWAS MAGIC lines F7 NA 0 0 0 0 5853494 2.7719869024853e 10.1002/tpg2.20333 NA NA t3827.T003669 Ca2_12005466 4 Days to maturity Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 54.879 10.1002/tpg2.20333 NA NA t3827.T003670 Ca2_32146004 4 Days to maturity Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 71.2 10.1002/tpg2.20333 NA NA t3827.T003671 Ca2_32389765 4 Days to maturity Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 70.996 10.1002/tpg2.20333 NA NA t3827.T003672 Ca8_4123449 4 Days to maturity Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 36.146 10.1002/tpg2.20333 NA NA t3827.T003673 Ca8_4123449 4 Days to maturity Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 36.146 10.1002/tpg2.20333 NA NA t3827.T003674 4 Days to Maturity (DM) Phenotypic screening and Marker MABC lines BC3F3 progenies NA 0 0 0 0 10.3389/fgene.2022.924287 NA NA t3827.T003675 4 Height to First Pod (cm) (HFP) MLM (K+Q) Chickpea accessions NA 0 0 0 0 0.0086 10.3390/biom13121722 NA NA t3827.T003676 4 Height to First Pod (cm) (HFP) MLM (K+Q) Chickpea accessions NA 0 0 0 0 0.038 10.3390/biom13121722 NA NA t3827.T003677 4 Leaf size Fine Mapping Heterogenous Inbred Families (HIFs) NA 0 0 0 0 10.3389/fpls.2022.829566 NA NA t3827.T003678 4 Number of Branches (NB) MLM (K+Q) Chickpea accessions NA 0 0 0 0 0.029 10.3390/biom13121722 NA NA t3827.T003679 4 Number of Branches per Plant Cross C (PBG7 x BS 100E) BC2F2 and BC2F3 NA 0 0 0 0 10.3389/fgene.2022.847647 NA NA t3827.T003680 4 Number of Pods per Plant (NPP) MLM (K+Q) Chickpea accessions NA 0 0 0 0 0.02 10.3390/biom13121722 NA NA t3827.T003681 4 Number of Pods per Plant (NPP) MLM (K+Q) Chickpea accessions NA 0 0 0 0 0.02 10.3390/biom13121722 NA NA t3827.T003682 4 Number of Pods per Plant (NPP) MLM (K+Q) Chickpea accessions NA 0 0 0 0 0.025 10.3390/biom13121722 NA NA t3827.T003683 4 Number of Pods per Plant (NPP) MLM (K+Q) Chickpea accessions NA 0 0 0 0 0.026 10.3390/biom13121722 NA NA t3827.T003684 4 Number of Pods per Plant (NPP) MLM (K+Q) Chickpea accessions NA 0 0 0 0 0.037 10.3390/biom13121722 NA NA t3827.T003685 qnpp-01 4 Number of Pods per Plant (NPP) Composite Interval Mapping (CIM) RILs F8 CNC_021161.1.24009817 NA 0 0 CNC_021161.1.30341279 0 0 3.64 10.3389/fgene.2022.953898 NA NA t3827.T003686 qnpp-01 4 Number of Pods per Plant (NPP) Composite Interval Mapping (CIM) RILs F8 CNC_021163.1.33772884 NA 0 0 CNC_021163.1.30731371 0 0 3.06 10.3389/fgene.2022.953898 NA NA t3827.T003687 qnpp-02 4 Number of Pods per Plant (NPP) Composite Interval Mapping (CIM) RILs F8 CNC_021163.1.29479703 NA 0 0 CNC_021163.1.25311228 0 0 3.4 10.3389/fgene.2022.953898 NA NA t3827.T003688 qnpp-03 4 Number of Pods per Plant (NPP) Composite Interval Mapping (CIM) RILs F8 CNC_021165.1.1002514 NA 0 0 CNC_021165.1.8008006 0 0 3.38 10.3389/fgene.2022.953898 NA NA t3827.T003689 qnpp-04 4 Number of Pods per Plant (NPP) Composite Interval Mapping (CIM) RILs F8 CNC_021166.1.23023466 NA 0 0 CNC_021166.1.17171266 0 0 3.94 10.3389/fgene.2022.953898 NA NA t3827.T003690 4 Number of Productive Nodes (NPN) MLM (K+Q) Chickpea accessions NA 0 0 0 0 0.0094 10.3390/biom13121722 NA NA t3827.T003691 4 Number of Productive Nodes (NPN) MLM (K+Q) Chickpea accessions NA 0 0 0 0 0.01 10.3390/biom13121722 NA NA t3827.T003692 4 Number of Productive Nodes (NPN) MLM (K+Q) Chickpea accessions NA 0 0 0 0 0.04 10.3390/biom13121722 NA NA t3827.T003693 4 Number of Productive Nodes (NPN) MLM (K+Q) Chickpea accessions NA 0 0 0 0 0.04 10.3390/biom13121722 NA NA t3827.T003694 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 3185473 7.87633394639645 10.1002/tpg2.20333 NA NA t3827.T003695 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 3370441 1.21797495926047 10.1002/tpg2.20333 NA NA t3827.T003696 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 3469475 4.2544194367055e 10.1002/tpg2.20333 NA NA t3827.T003697 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 3609518 2.21043612258822 10.1002/tpg2.20333 NA NA t3827.T003698 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 3639513 3.05784641970874 10.1002/tpg2.20333 NA NA t3827.T003699 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 3725013 2.38823217659077 10.1002/tpg2.20333 NA NA t3827.T003700 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 3750945 7.62213372388573 10.1002/tpg2.20333 NA NA t3827.T003701 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 3812241 5.38806376253491 10.1002/tpg2.20333 NA NA t3827.T003702 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 3846484 1.81708565811311 10.1002/tpg2.20333 NA NA t3827.T003703 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 3846484 3.35209021366462 10.1002/tpg2.20333 NA NA t3827.T003704 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 3873355 9.69007040359605 10.1002/tpg2.20333 NA NA t3827.T003705 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 3934561 4.58818529327004 10.1002/tpg2.20333 NA NA t3827.T003706 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 3934561 6.33252384922007 10.1002/tpg2.20333 NA NA t3827.T003707 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4029388 6.74935372082587 10.1002/tpg2.20333 NA NA t3827.T003708 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4029792 1.51430900453184 10.1002/tpg2.20333 NA NA t3827.T003709 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4035189 3.21210341156069 10.1002/tpg2.20333 NA NA t3827.T003710 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4045723 4.91648001995349 10.1002/tpg2.20333 NA NA t3827.T003711 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4045723 5.21886427007813 10.1002/tpg2.20333 NA NA t3827.T003712 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4106644 2.21141073932677 10.1002/tpg2.20333 NA NA t3827.T003713 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4106644 4.98811076908043 10.1002/tpg2.20333 NA NA t3827.T003714 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4111438 5.23566687665647 10.1002/tpg2.20333 NA NA t3827.T003715 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4118177 6.9e-08 10.1002/tpg2.20333 NA NA t3827.T003716 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4140056 1.9125299963308e 10.1002/tpg2.20333 NA NA t3827.T003717 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4140056 5.21475187400602 10.1002/tpg2.20333 NA NA t3827.T003718 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4144853 1.89116234836607 10.1002/tpg2.20333 NA NA t3827.T003719 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4144982 1.24413734323105 10.1002/tpg2.20333 NA NA t3827.T003720 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4144982 9.41648017021454 10.1002/tpg2.20333 NA NA t3827.T003721 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4178731 1.62637127695326 10.1002/tpg2.20333 NA NA t3827.T003722 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4178731 3.68818890127332 10.1002/tpg2.20333 NA NA t3827.T003723 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4189078 1.60090742709658 10.1002/tpg2.20333 NA NA t3827.T003724 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4189078 4.80622216269165 10.1002/tpg2.20333 NA NA t3827.T003725 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4212539 4.84019966038397 10.1002/tpg2.20333 NA NA t3827.T003726 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4213573 4.19366353172082 10.1002/tpg2.20333 NA NA t3827.T003727 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4216460 3.51645370809388 10.1002/tpg2.20333 NA NA t3827.T003728 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4216460 8.17515251534461 10.1002/tpg2.20333 NA NA t3827.T003729 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4235453 3.0998642641972e 10.1002/tpg2.20333 NA NA t3827.T003730 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4235453 3.35839798429155 10.1002/tpg2.20333 NA NA t3827.T003731 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4269805 1.25055963807994 10.1002/tpg2.20333 NA NA t3827.T003732 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4269805 2.94477707799849 10.1002/tpg2.20333 NA NA t3827.T003733 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4439745 2.52576149073808 10.1002/tpg2.20333 NA NA t3827.T003734 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4439745 9.98590334175859 10.1002/tpg2.20333 NA NA t3827.T003735 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4504367 2.78154164153798 10.1002/tpg2.20333 NA NA t3827.T003736 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4504367 8.84809042655192 10.1002/tpg2.20333 NA NA t3827.T003737 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4560133 4.75946534876712 10.1002/tpg2.20333 NA NA t3827.T003738 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4560133 6.45697825013008 10.1002/tpg2.20333 NA NA t3827.T003739 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4560371 6.99998059934377 10.1002/tpg2.20333 NA NA t3827.T003740 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4560371 7.39403427625195 10.1002/tpg2.20333 NA NA t3827.T003741 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4561534 3.19100180131446 10.1002/tpg2.20333 NA NA t3827.T003742 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4561534 6.41731121636183 10.1002/tpg2.20333 NA NA t3827.T003743 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4641743 4.1e-08 10.1002/tpg2.20333 NA NA t3827.T003744 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4734199 3.12495453567723 10.1002/tpg2.20333 NA NA t3827.T003745 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4734199 6e-09 10.1002/tpg2.20333 NA NA t3827.T003746 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4751090 1.77509211149169 10.1002/tpg2.20333 NA NA t3827.T003747 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4751090 6.59851495708704 10.1002/tpg2.20333 NA NA t3827.T003748 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4764769 3.02819999922602 10.1002/tpg2.20333 NA NA t3827.T003749 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4764769 5.72913146624951 10.1002/tpg2.20333 NA NA t3827.T003750 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4797392 3e-09 10.1002/tpg2.20333 NA NA t3827.T003751 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4797392 5.3894975560808e 10.1002/tpg2.20333 NA NA t3827.T003752 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4797656 4.82010259278868 10.1002/tpg2.20333 NA NA t3827.T003753 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4797656 5.22254419610656 10.1002/tpg2.20333 NA NA t3827.T003754 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4880121 3.40912760459199 10.1002/tpg2.20333 NA NA t3827.T003755 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4880121 4.53077184170719 10.1002/tpg2.20333 NA NA t3827.T003756 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4904014 2.09101337214033 10.1002/tpg2.20333 NA NA t3827.T003757 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 4904014 8.82254408748201 10.1002/tpg2.20333 NA NA t3827.T003758 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 5010251 2.23012203386902 10.1002/tpg2.20333 NA NA t3827.T003759 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 5010251 5.17199380172516 10.1002/tpg2.20333 NA NA t3827.T003760 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 5073590 4.59864335962416 10.1002/tpg2.20333 NA NA t3827.T003761 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 5073590 5.70383900143023 10.1002/tpg2.20333 NA NA t3827.T003762 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 5082607 2.14277035720433 10.1002/tpg2.20333 NA NA t3827.T003763 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 5082607 8.71807644174245 10.1002/tpg2.20333 NA NA t3827.T003764 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 5116250 4.1e-08 10.1002/tpg2.20333 NA NA t3827.T003765 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 5133476 4.70705981343838 10.1002/tpg2.20333 NA NA t3827.T003766 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 5133476 5.30345824287674 10.1002/tpg2.20333 NA NA t3827.T003767 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 5247038 8.78528692752539 10.1002/tpg2.20333 NA NA t3827.T003768 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 5294843 1.14164047241338 10.1002/tpg2.20333 NA NA t3827.T003769 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 5294843 1.58416047421116 10.1002/tpg2.20333 NA NA t3827.T003770 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 5450712 2.71063403825584 10.1002/tpg2.20333 NA NA t3827.T003771 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 5450712 6.45894609969976 10.1002/tpg2.20333 NA NA t3827.T003772 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 5452138 1.1414606046666e 10.1002/tpg2.20333 NA NA t3827.T003773 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 5452138 3.91776087451526 10.1002/tpg2.20333 NA NA t3827.T003774 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 5616647 5.36457551732258 10.1002/tpg2.20333 NA NA t3827.T003775 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 5682944 1.83669899328339 10.1002/tpg2.20333 NA NA t3827.T003776 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 5682944 3.95648694242951 10.1002/tpg2.20333 NA NA t3827.T003777 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 5755970 9.55188484370008 10.1002/tpg2.20333 NA NA t3827.T003778 4 Plant height GWAS MAGIC lines F7 NA 0 0 0 0 5789335 7.45783636130156 10.1002/tpg2.20333 NA NA t3827.T003779 4 Plant Height (cm) Cross C (PBG7 x BS 100E) BC2F2 and BC2F3 NA 0 0 0 0 10.3389/fgene.2022.847647 NA NA t3827.T003780 Ca1_16017040 4 Plant height (cm) Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 198.5 10.1002/tpg2.20333 NA NA t3827.T003781 Ca2_31949226 4 Plant height (cm) Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 85.866 10.1002/tpg2.20333 NA NA t3827.T003782 Ca3_27203587 4 Plant height (cm) Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 25.719 10.1002/tpg2.20333 NA NA t3827.T003783 Ca4_13151927 4 Plant height (cm) Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 90.389 10.1002/tpg2.20333 NA NA t3827.T003784 Ca4_13151927 4 Plant height (cm) Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 90.389 10.1002/tpg2.20333 NA NA t3827.T003785 Ca8_4311705 4 Plant height (cm) Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 37.288 10.1002/tpg2.20333 NA NA t3827.T003786 Ca8_5294843 4 Plant height (cm) Identity-by-Descent (IBD) mixed MAGIC lines F7 NA 0 0 0 0 51.099 10.1002/tpg2.20333 NA NA t3827.T003787 4 Plant Height (cm) (PH) MLM (K+Q) Chickpea accessions NA 0 0 0 0 0.041 10.3390/biom13121722 NA NA t3827.T003788 4 Plant Height (cm) (PH) MLM (K+Q) Chickpea accessions NA 0 0 0 0 0.042 10.3390/biom13121722 NA NA t3827.T003789 4 Seed Size Phenotyping Near Isogenic Lines (NILs) NA 0 0 0 0 10.3389/fpls.2022.829566 NA NA t3827.T003790 Ca4_Vqtl 4 Vigor-related traits Recombinant association analysis Heterogenous Inbred Families (HIFs) F2 NA 0 0 0 0 10.3389/fpls.2022.829566 NA NA t3827.T003791 5 β-Carotene Blink Genotypes NA 13,877,854 0 0 0 0 1.51e-11 10.3389/fpls.2022.843911 NA NA t3827.T003792 5 β-Carotene Blink Genotypes NA 40,475,284 0 0 0 0 5.69e-09 10.3389/fpls.2022.843911 NA NA t3827.T003793 5 Calcium Blink Genotypes NA 28,949,260 0 0 0 0 2.91e-07 10.3389/fpls.2022.843911 NA NA t3827.T003794 5 Ciceritol GWAS Mini-core collection NA Ca1_46225454 0 0 0 0 5.24e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003795 5 Ciceritol GWAS Mini-core collection NA Ca2_15589436 0 0 0 0 2.57e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003796 5 Ciceritol GWAS Mini-core collection NA Ca4_11536839 0 0 0 0 5.22e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003797 5 Ciceritol GWAS Mini-core collection NA Ca4_30621427 0 0 0 0 2.38e-07 10.3389/fpls.2022.1024543 NA NA t3827.T003798 5 Ciceritol GWAS Mini-core collection NA Ca5_1870839 0 0 0 0 9.02e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003799 5 Ciceritol GWAS Mini-core collection NA Ca5_34185294 0 0 0 0 7.22e-07 10.3389/fpls.2022.1024543 NA NA t3827.T003800 5 Ciceritol GWAS Mini-core collection NA Ca7_11316700 0 0 0 0 9.64e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003801 5 Crude protein Blink Genotypes NA 57,802,709 0 0 0 0 1.04e-08 10.3389/fpls.2022.843911 NA NA t3827.T003802 5 Crude protein Blink Genotypes NA 57,802,709 0 0 0 0 1.06e-07 10.3389/fpls.2022.843911 NA NA t3827.T003803 5 Crude protein MLMM Genotypes NA 57,802,709 0 0 0 0 5.16e-07 10.3389/fpls.2022.843911 NA NA t3827.T003804 5 Crude protein MLMM Genotypes NA 57,802,709 0 0 0 0 5.76e-08 10.3389/fpls.2022.843911 NA NA t3827.T003805 5 Cu GWAS-MLM Genotypes NA 1,362,575 0 0 0 0 5.0 × 10–4 - 6.4 10.1038/s41598-022-14487-1 NA NA t3827.T003806 5 Cu GWAS-MLM Genotypes NA 1,981,497 0 0 0 0 7.7 × 10–4 - 11 10.1038/s41598-022-14487-1 NA NA t3827.T003807 5 Cu GWAS-MLM Genotypes NA 15,048,315 0 0 0 0 7.6 × 10–4 - 1.7 10.1038/s41598-022-14487-1 NA NA t3827.T003808 5 Cu GWAS-MLM Genotypes NA 28,265,735 0 0 0 0 9.1 × 10–4 - 1.0 10.1038/s41598-022-14487-1 NA NA t3827.T003809 5 Cu GWAS-MLM Genotypes NA 28,692,545 0 0 0 0 2.5 × 10–4 - 3.0 10.1038/s41598-022-14487-1 NA NA t3827.T003810 5 Cu GWAS-MLM Genotypes NA 31,215,660 0 0 0 0 6.3 × 10–4 - 7.0 10.1038/s41598-022-14487-1 NA NA t3827.T003811 5 Cu GWAS-MLM Genotypes NA 58,080,360 0 0 0 0 4.8 × 10–5 - 5.4 10.1038/s41598-022-14487-1 NA NA t3827.T003812 5 Cu GWAS-MLM Genotypes NA 58,080,360 0 0 0 0 4.8 × 10–5 - 8.5 10.1038/s41598-022-14487-1 NA NA t3827.T003813 5 Cu GWAS-MLM Genotypes NA 58,809,225 0 0 0 0 7.1 × 10–4 - 9.7 10.1038/s41598-022-14487-1 NA NA t3827.T003814 5 Cu GWAS-MLM Genotypes NA 58,809,225 0 0 0 0 7.1 × 10–4 - 9.7 10.1038/s41598-022-14487-1 NA NA t3827.T003815 5 Cu GWAS-MLM Genotypes NA 7,906,273 0 0 0 0 6.4 × 10–4 - 1.7 10.1038/s41598-022-14487-1 NA NA t3827.T003816 5 Cu GWAS-MLM Genotypes NA 8,354,799 0 0 0 0 5.8 × 10–5 - 1.8 10.1038/s41598-022-14487-1 NA NA t3827.T003817 5 Fe GWAS-MLM Genotypes NA 12,583,357 0 0 0 0 3.7 × 10–6 10.1038/s41598-022-14487-1 NA NA t3827.T003818 5 Fe GWAS-MLM Genotypes NA 2,398,909 0 0 0 0 5.9 × 10–4 10.1038/s41598-022-14487-1 NA NA t3827.T003819 5 Fe GWAS-MLM Genotypes NA 2,899,986 0 0 0 0 2.4 × 10–4 10.1038/s41598-022-14487-1 NA NA t3827.T003820 5 Fe GWAS-MLM Genotypes NA 26,236,362 0 0 0 0 1.2 × 10–4 10.1038/s41598-022-14487-1 NA NA t3827.T003821 5 Fe GWAS-MLM Genotypes NA 27,840,598 0 0 0 0 2.4 × 10–5 10.1038/s41598-022-14487-1 NA NA t3827.T003822 5 Fe GWAS-MLM Genotypes NA 41,579,601 0 0 0 0 5.8 × 10–5 10.1038/s41598-022-14487-1 NA NA t3827.T003823 5 Fe GWAS-MLM Genotypes NA 46,127,728 0 0 0 0 5.8 × 10–4 10.1038/s41598-022-14487-1 NA NA t3827.T003824 5 Fe GWAS-MLM Genotypes NA 58,400,703 0 0 0 0 1.7 × 10–4 10.1038/s41598-022-14487-1 NA NA t3827.T003825 5 Fe GWAS-MLM Genotypes NA 9,393,627 0 0 0 0 8.9 × 10–4 10.1038/s41598-022-14487-1 NA NA t3827.T003826 5 Folate Blink Genotypes NA 1,677,219 0 0 0 0 6.83e-10 10.3389/fpls.2022.843911 NA NA t3827.T003827 5 Folate Blink Genotypes NA 13,906,696 0 0 0 0 1.55e-08 10.3389/fpls.2022.843911 NA NA t3827.T003828 5 Folate Blink Genotypes NA 3,377,773 0 0 0 0 2.41e-09 10.3389/fpls.2022.843911 NA NA t3827.T003829 5 Folate Blink Genotypes NA 30,146,046 0 0 0 0 2.72e-08 10.3389/fpls.2022.843911 NA NA t3827.T003830 5 Folate Blink Genotypes NA 37,846,900 0 0 0 0 3.85e-09 10.3389/fpls.2022.843911 NA NA t3827.T003831 5 Folate Blink Genotypes NA 4,272,745 0 0 0 0 1.42e-07 10.3389/fpls.2022.843911 NA NA t3827.T003832 5 Folate Blink Genotypes NA 42,574,243 0 0 0 0 3.67e-20 10.3389/fpls.2022.843911 NA NA t3827.T003833 5 Folate Blink Genotypes NA 664,616 0 0 0 0 1.82e-12 10.3389/fpls.2022.843911 NA NA t3827.T003834 5 Folate MLMM Genotypes NA 42,574,243 0 0 0 0 3.2e-11 10.3389/fpls.2022.843911 NA NA t3827.T003835 5 Folate MLMM Genotypes NA 664,616 0 0 0 0 4.93e-13 10.3389/fpls.2022.843911 NA NA t3827.T003836 5 Iron MLMM Genotypes NA 1,234,549 0 0 0 0 1.14e-07 10.3389/fpls.2022.843911 NA NA t3827.T003837 5 Magnesium MLMM Genotypes NA 25,983,206 0 0 0 0 5.46e-08 10.3389/fpls.2022.843911 NA NA t3827.T003838 5 Magnesium MLMM Genotypes NA 38,936,863 0 0 0 0 6.73e-07 10.3389/fpls.2022.843911 NA NA t3827.T003839 5 Manganese Blink Genotypes NA 11,561,528 0 0 0 0 1.66e-07 10.3389/fpls.2022.843911 NA NA t3827.T003840 5 Manganese Blink Genotypes NA 13,610,484 0 0 0 0 1.84e-10 10.3389/fpls.2022.843911 NA NA t3827.T003841 5 Manganese Blink Genotypes NA 53,593,815 0 0 0 0 9.95e-11 10.3389/fpls.2022.843911 NA NA t3827.T003842 5 Manganese Blink Genotypes NA 7,953,148 0 0 0 0 2.72e-09 10.3389/fpls.2022.843911 NA NA t3827.T003843 5 Manganese Blink Genotypes NA 8,778,763 0 0 0 0 2.27e-07 10.3389/fpls.2022.843911 NA NA t3827.T003844 5 Mn GWAS-MLM Genotypes NA 10,705,659 0 0 0 0 7.7 × 10–4 - 2.2 10.1038/s41598-022-14487-1 NA NA t3827.T003845 5 Mn GWAS-MLM Genotypes NA 16,499,935 0 0 0 0 1.7 × 10–4 - 7.9 10.1038/s41598-022-14487-1 NA NA t3827.T003846 5 Mn GWAS-MLM Genotypes NA 16,986,881 0 0 0 0 2.5 × 10–4 - 1.8 10.1038/s41598-022-14487-1 NA NA t3827.T003847 5 Mn GWAS-MLM Genotypes NA 17,033,403 0 0 0 0 8.0 × 10–5 - 5.5 10.1038/s41598-022-14487-1 NA NA t3827.T003848 5 Mn GWAS-MLM Genotypes NA 3,431,242 0 0 0 0 5.4 × 10–4 - 2.7 10.1038/s41598-022-14487-1 NA NA t3827.T003849 5 Mn GWAS-MLM Genotypes NA 30,961,497 0 0 0 0 3.8 × 10–4 - 4.0 10.1038/s41598-022-14487-1 NA NA t3827.T003850 5 Mn GWAS-MLM Genotypes NA 37,944,759 0 0 0 0 4.4 × 10–4 - 2.5 10.1038/s41598-022-14487-1 NA NA t3827.T003851 5 Mn GWAS-MLM Genotypes NA 44,921,315 0 0 0 0 4.6 × 10–4 - 5.4 10.1038/s41598-022-14487-1 NA NA t3827.T003852 5 Mn GWAS-MLM Genotypes NA 45,882,207 0 0 0 0 3.2 × 10–4 - 2.0 10.1038/s41598-022-14487-1 NA NA t3827.T003853 5 Phytic acid Blink Genotypes NA 32,272,158 0 0 0 0 2.15e-09 10.3389/fpls.2022.843911 NA NA t3827.T003854 5 Raffinose GWAS Mini-core collection NA Ca1_36822662 0 0 0 0 3.61e-07 10.3389/fpls.2022.1024543 NA NA t3827.T003855 5 Raffinose GWAS Mini-core collection NA Ca1_41085856 0 0 0 0 8.75e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003856 5 Raffinose GWAS Mini-core collection NA Ca2_16716210 0 0 0 0 4.4e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003857 5 Raffinose GWAS Mini-core collection NA Ca4_16178393 0 0 0 0 2.89e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003858 5 Raffinose GWAS Mini-core collection NA Ca4_43438450 0 0 0 0 7.7e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003859 5 Raffinose GWAS Mini-core collection NA Ca4_9041839 0 0 0 0 6.76e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003860 5 Raffinose GWAS Mini-core collection NA Ca5_12255667 0 0 0 0 4.58e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003861 5 Raffinose GWAS Mini-core collection NA Ca5_42575149 0 0 0 0 5.24e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003862 5 Raffinose GWAS Mini-core collection NA Ca5_42575153 0 0 0 0 1.16e-07 10.3389/fpls.2022.1024543 NA NA t3827.T003863 5 Raffinose GWAS Mini-core collection NA Ca6_14474273 0 0 0 0 9.04e-07 10.3389/fpls.2022.1024543 NA NA t3827.T003864 5 Raffinose GWAS Mini-core collection NA Ca6_18000446 0 0 0 0 3.06e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003865 5 Raffinose GWAS Mini-core collection NA Ca6_26580794 0 0 0 0 2.85e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003866 5 Raffinose GWAS Mini-core collection NA Ca6_44267477 0 0 0 0 6.5e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003867 5 Raffinose GWAS Mini-core collection NA Ca6_56636684 0 0 0 0 1.66e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003868 5 Raffinose GWAS Mini-core collection NA Ca7_19222249 0 0 0 0 3.54e-07 10.3389/fpls.2022.1024543 NA NA t3827.T003869 5 Raffinose GWAS Mini-core collection NA Ca7_32073468 0 0 0 0 3.55e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003870 5 Stachyose GWAS Mini-core collection NA Ca2_19532676 0 0 0 0 6.21e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003871 5 Stachyose GWAS Mini-core collection NA Ca2_35864450 0 0 0 0 2e-07 10.3389/fpls.2022.1024543 NA NA t3827.T003872 5 Stachyose GWAS Mini-core collection NA Ca3_23073125 0 0 0 0 6.86e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003873 5 Stachyose GWAS Mini-core collection NA Ca4_11202747 0 0 0 0 8.39e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003874 5 Stachyose GWAS Mini-core collection NA Ca4_47554909 0 0 0 0 5.72e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003875 5 Stachyose GWAS Mini-core collection NA Ca4_6044239 0 0 0 0 4.87e-07 10.3389/fpls.2022.1024543 NA NA t3827.T003876 5 Stachyose GWAS Mini-core collection NA Ca8_14016267 0 0 0 0 2.07e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003877 5 Sucrose GWAS Mini-core collection NA Ca2_33431205 0 0 0 0 9.25e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003878 5 Sucrose GWAS Mini-core collection NA Ca3_11428639 0 0 0 0 3.56e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003879 5 Sucrose GWAS Mini-core collection NA Ca3_21765752 0 0 0 0 7.67e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003880 5 Sucrose GWAS Mini-core collection NA Ca5_14173812 0 0 0 0 3.96e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003881 5 Sucrose GWAS Mini-core collection NA Ca6_2510863 0 0 0 0 6.24e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003882 5 Sucrose GWAS Mini-core collection NA Ca6_46242693 0 0 0 0 9.41e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003883 5 Sucrose GWAS Mini-core collection NA Ca7_44816569 0 0 0 0 7.12e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003884 5 Sucrose GWAS Mini-core collection NA Ca8_11491206 0 0 0 0 2.7e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003885 5 Total Sugar GWAS Mini-core collection NA Ca4_14043315 0 0 0 0 4.99e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003886 5 Total Sugar GWAS Mini-core collection NA Ca4_17208915 0 0 0 0 3.26e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003887 5 Total Sugar GWAS Mini-core collection NA Ca4_22983648 0 0 0 0 2.57e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003888 5 Total Sugar GWAS Mini-core collection NA Ca4_30621427 0 0 0 0 7.43e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003889 5 Total Sugar GWAS Mini-core collection NA Ca5_30294813 0 0 0 0 9.18e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003890 5 Total Sugar GWAS Mini-core collection NA Ca6_22947128 0 0 0 0 5.86e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003891 5 Total Sugar GWAS Mini-core collection NA Ca7_11316700 0 0 0 0 1.34e-06 10.3389/fpls.2022.1024543 NA NA t3827.T003892 5 Vitamin B1 Blink Genotypes NA 13,432,853 0 0 0 0 1.03e-08 10.3389/fpls.2022.843911 NA NA t3827.T003893 5 Vitamin B1 Blink Genotypes NA 13,749,741 0 0 0 0 2.11e-07 10.3389/fpls.2022.843911 NA NA t3827.T003894 5 Vitamin B1 Blink Genotypes NA 32,272,158 0 0 0 0 3.38e-10 10.3389/fpls.2022.843911 NA NA t3827.T003895 5 Vitamin B1 Blink Genotypes NA 33,654,122 0 0 0 0 6.14e-08 10.3389/fpls.2022.843911 NA NA t3827.T003896 5 Vitamin B1 Blink Genotypes NA 4,224,251 0 0 0 0 4.63e-08 10.3389/fpls.2022.843911 NA NA t3827.T003897 5 Vitamin B2 Blink Genotypes NA 22,136,316 0 0 0 0 4.15e-12 10.3389/fpls.2022.843911 NA NA t3827.T003898 5 Vitamin B2 Blink Genotypes NA 23,566,184 0 0 0 0 6.66e-09 10.3389/fpls.2022.843911 NA NA t3827.T003899 5 Vitamin B2 Blink Genotypes NA 28,329,273 0 0 0 0 6.93e-08 10.3389/fpls.2022.843911 NA NA t3827.T003900 5 Vitamin B2 Blink Genotypes NA 3,519,666 0 0 0 0 8.18e-13 10.3389/fpls.2022.843911 NA NA t3827.T003901 5 Vitamin B2 Blink Genotypes NA 34,135,643 0 0 0 0 1.02e-08 10.3389/fpls.2022.843911 NA NA t3827.T003902 5 Vitamin B2 MLMM Genotypes NA 22,136,316 0 0 0 0 1.66e-11 10.3389/fpls.2022.843911 NA NA t3827.T003903 5 Vitamin B2 MLMM Genotypes NA 28,329,273 0 0 0 0 2.35e-09 10.3389/fpls.2022.843911 NA NA t3827.T003904 5 Vitamin B2 MLMM Genotypes NA 3,519,666 0 0 0 0 5.88e-12 10.3389/fpls.2022.843911 NA NA t3827.T003905 5 Vitamin B2 MLMM Genotypes NA 57,141,662 0 0 0 0 1.33e-07 10.3389/fpls.2022.843911 NA NA t3827.T003906 5 Vitamin B2 MLMM Genotypes NA 6,576,624 0 0 0 0 5.02e-07 10.3389/fpls.2022.843911 NA NA t3827.T003907 5 Vitamin B6 Blink Genotypes NA 12,856,827 0 0 0 0 8.35e-09 10.3389/fpls.2022.843911 NA NA t3827.T003908 5 Vitamin B6 Blink Genotypes NA 14,274,204 0 0 0 0 2.6e-09 10.3389/fpls.2022.843911 NA NA t3827.T003909 5 Vitamin B6 Blink Genotypes NA 16,525,546 0 0 0 0 6.65e-08 10.3389/fpls.2022.843911 NA NA t3827.T003910 5 Vitamin B6 Blink Genotypes NA 17,620,596 0 0 0 0 6.86e-10 10.3389/fpls.2022.843911 NA NA t3827.T003911 5 Vitamin B6 Blink Genotypes NA 21,506,706 0 0 0 0 2.62e-09 10.3389/fpls.2022.843911 NA NA t3827.T003912 5 Vitamin B6 Blink Genotypes NA 29,622,277 0 0 0 0 1.56e-09 10.3389/fpls.2022.843911 NA NA t3827.T003913 5 Vitamin B6 Blink Genotypes NA 30,171,713 0 0 0 0 2.73e-10 10.3389/fpls.2022.843911 NA NA t3827.T003914 5 Vitamin B6 Blink Genotypes NA 37,989,135 0 0 0 0 1.34e-07 10.3389/fpls.2022.843911 NA NA t3827.T003915 5 Vitamin B6 Blink Genotypes NA 46,160,992 0 0 0 0 7.8e-11 10.3389/fpls.2022.843911 NA NA t3827.T003916 5 Vitamin B6 Blink Genotypes NA 6,685,915 0 0 0 0 1.37e-10 10.3389/fpls.2022.843911 NA NA t3827.T003917 5 Vitamin B6 MLMM Genotypes NA 12,856,827 0 0 0 0 4.86e-09 10.3389/fpls.2022.843911 NA NA t3827.T003918 5 Vitamin B6 MLMM Genotypes NA 29,622,277 0 0 0 0 1.48e-10 10.3389/fpls.2022.843911 NA NA t3827.T003919 5 Vitamin B6 MLMM Genotypes NA 34,025,270 0 0 0 0 1.46e-08 10.3389/fpls.2022.843911 NA NA t3827.T003920 5 Vitamin B6 MLMM Genotypes NA 37,989,135 0 0 0 0 5.1e-07 10.3389/fpls.2022.843911 NA NA t3827.T003921 5 Zinc Blink Genotypes NA 1,204,130 0 0 0 0 3.46e-09 10.3389/fpls.2022.843911 NA NA t3827.T003922 5 Zinc Blink Genotypes NA 30,884,344 0 0 0 0 5.38e-11 10.3389/fpls.2022.843911 NA NA t3827.T003923 5 Zinc Blink Genotypes NA 31,771,545 0 0 0 0 3.02e-08 10.3389/fpls.2022.843911 NA NA t3827.T003924 5 Zinc Blink Genotypes NA 31,771,545 0 0 0 0 4.75e-11 10.3389/fpls.2022.843911 NA NA t3827.T003925 5 Zinc Blink Genotypes NA 7,031,080 0 0 0 0 2.75e-12 10.3389/fpls.2022.843911 NA NA t3827.T003926 5 Zinc MLMM Genotypes NA 30,884,344 0 0 0 0 1.38e-07 10.3389/fpls.2022.843911 NA NA t3827.T003927 5 Zinc MLMM Genotypes NA 31,771,545 0 0 0 0 2.15e-07 10.3389/fpls.2022.843911 NA NA t3827.T003928 5 Zn GWAS-MLM Genotypes NA 2,896,714 0 0 0 0 8.3 × 10–4 10.1038/s41598-022-14487-1 NA NA t3827.T003929 5 Zn GWAS-MLM Genotypes NA 29,434,198 0 0 0 0 2.5 × 10–4 10.1038/s41598-022-14487-1 NA NA t3827.T003930 5 Zn GWAS-MLM Genotypes NA 34,010,123 0 0 0 0 4.5 × 10–4 - 8.0 10.1038/s41598-022-14487-1 NA NA t3827.T003931 5 Zn GWAS-MLM Genotypes NA 40,625,899 0 0 0 0 3.3 × 10–4 10.1038/s41598-022-14487-1 NA NA t3827.T003932 5 Zn GWAS-MLM Genotypes NA 42,022,431 0 0 0 0 7.6 × 10–4 10.1038/s41598-022-14487-1 NA NA t3827.T003933 6 Harvest Index (%) Cross C (PBG7 x BS 100E) BC2F2 and BC2F3 NA 0 0 0 0 10.3389/fgene.2022.847647 NA NA t3827.T003934 qhi-01 6 Harvest Index (%) (HI) Composite Interval Mapping (CIM) RILs F8 CNC_021163.1.30731371 NA 0 0 CNC_021163.1.30731330 0 0 3.52 10.3389/fgene.2022.953898 NA NA t3827.T003935 qhi-01 6 Harvest Index (%) (HI) Composite Interval Mapping (CIM) RILs F8 CNC_021163.1.33772884 NA 0 0 CNC_021163.1.30731371 0 0 4.16 10.3389/fgene.2022.953898 NA NA t3827.T003936 qhi-02 6 Harvest Index (%) (HI) Composite Interval Mapping (CIM) RILs F8 CNC_021163.1.30731371 NA 0 0 CNC_021163.1.30731330 0 0 4.65 10.3389/fgene.2022.953898 NA NA t3827.T003937 qhi-02 6 Harvest Index (%) (HI) Composite Interval Mapping (CIM) RILs F8 CNC_021165.1.21676871 NA 0 0 CNC_021165.1.32146805 0 0 3.44 10.3389/fgene.2022.953898 NA NA t3827.T003938 qhi-03 6 Harvest Index (%) (HI) Composite Interval Mapping (CIM) RILs F8 CNC_021163.1.12812016 NA 0 0 CNC_021163.1.12811959 0 0 3.27 10.3389/fgene.2022.953898 NA NA t3827.T003939 qhi-03 6 Harvest Index (%) (HI) Composite Interval Mapping (CIM) RILs F8 CNC_021165.1.36994104 NA 0 0 CNC_021165.1.17940395 0 0 3.01 10.3389/fgene.2022.953898 NA NA t3827.T003940 qmpi-01 6 Membrane Permeability Index (MPI) Composite Interval Mapping (CIM) RILs F8 CNC_021163.1.30731371 NA 0 0 CNC_021163.1.30731330 0 0 3.73 10.3389/fgene.2022.953898 NA NA t3827.T003941 qmpi-01 6 Membrane Permeability Index (MPI) Composite Interval Mapping (CIM) RILs F8 CNC_021165.1.1002514 NA 0 0 CNC_021165.1.8008006 0 0 4.44 10.3389/fgene.2022.953898 NA NA t3827.T003942 qmpi-02 6 Membrane Permeability Index (MPI) Composite Interval Mapping (CIM) RILs F8 CNC_021165.1.1002514 NA 0 0 CNC_021165.1.8008006 0 0 3.89 10.3389/fgene.2022.953898 NA NA t3827.T003943 qmpi-02 6 Membrane Permeability Index (MPI) Composite Interval Mapping (CIM) RILs F8 CNC_021165.1.21676871 NA 0 0 CNC_021165.1.32146805 0 0 3.89 10.3389/fgene.2022.953898 NA NA t3827.T003944 qmpi-03 6 Membrane Permeability Index (MPI) Composite Interval Mapping (CIM) RILs F8 CNC_021166.1.12612605 NA 0 0 CNC_021166.1.23023466 0 0 3.22 10.3389/fgene.2022.953898 NA NA t3827.T003945 qMSI2.1 6 Membrane Stability Index (MSI) Genome-Wide Composite Interval M RILs F11 S2_35782996 NA 0 0 S2_35782996 0 0 107.35 3.05 10.1038/s41598-023-44990-y NA NA t3827.T003946 qMSI2.1 6 Membrane Stability Index (MSI) Genome-Wide Composite Interval M RILs F11 S2_35782996 NA 0 0 S2_35782996 0 0 107.35 3.86 10.1038/s41598-023-44990-y NA NA t3827.T003947 qMSI4.1 6 Membrane Stability Index (MSI) Genome-Wide Composite Interval M RILs F11 S4_13841401 NA 0 0 S4_13841401 0 0 41.52 3.01 10.1038/s41598-023-44990-y NA NA t3827.T003948 qMSI4.1 6 Membrane Stability Index (MSI) Genome-Wide Composite Interval M RILs F11 S4_13841401 NA 0 0 S4_13841401 0 0 41.52 4.62 10.1038/s41598-023-44990-y NA NA t3827.T003949 qMSI4.1 6 Membrane Stability Index (MSI) Genome-Wide Composite Interval M RILs F11 S4_13841401 NA 0 0 S4_13841401 0 0 41.52 4.85 10.1038/s41598-023-44990-y NA NA t3827.T003950 qMSI4.1 6 Membrane Stability Index (MSI) Genome-Wide Composite Interval M RILs F11 S4_13841401 NA 0 0 S4_13841401 0 0 41.52 5.15 10.1038/s41598-023-44990-y NA NA t3827.T003951 qMSI5.1 6 Membrane Stability Index (MSI) Genome-Wide Composite Interval M RILs F11 S5_17323202 NA 0 0 S5_17323202 0 0 51.97 3.16 10.1038/s41598-023-44990-y NA NA t3827.T003952 qMSI7.1 6 Membrane Stability Index (MSI) Genome-Wide Composite Interval M RILs F11 S7_11812441 NA 0 0 S7_11870532 0 0 35.61 2.98 10.1038/s41598-023-44990-y NA NA t3827.T003953 qMSI7.1 6 Membrane Stability Index (MSI) Genome-Wide Composite Interval M RILs F11 S7_11812441 NA 0 0 S7_11870532 0 0 35.61 4.03 10.1038/s41598-023-44990-y NA NA t3827.T003954 qMSI7.2 6 Membrane Stability Index (MSI) Genome-Wide Composite Interval M RILs F11 S7_20579963 NA 0 0 S7_21595527 0 0 62.8 2.64 10.1038/s41598-023-44990-y NA NA t3827.T003955 qMSI7.2 6 Membrane Stability Index (MSI) Genome-Wide Composite Interval M RILs F11 S7_20579963 NA 0 0 S7_21595527 0 0 62.8 3.08 10.1038/s41598-023-44990-y NA NA t3827.T003956 qrdwtdw-01 6 Ratio of Root Dry Weight to Total Plant Dry Weight (RDW/TDW) Composite Interval Mapping (CIM) RILs F8 CNC_021164.1.3036101 NA 0 0 CNC_021164.1.6394203 0 0 3.26 10.3389/fgene.2022.953898 NA NA t3827.T003957 qrlwc-01 6 Relative Leaf Water Content (%) (RLWC) Composite Interval Mapping (CIM) RILs F8 CNC_021163.1.30731371 NA 0 0 CNC_021163.1.30731330 0 0 3.78 10.3389/fgene.2022.953898 NA NA t3827.T003958 qrlwc-01 6 Relative Leaf Water Content (%) (RLWC) Composite Interval Mapping (CIM) RILs F8 CNC_021163.1.30731371 NA 0 0 CNC_021163.1.30731330 0 0 4.16 10.3389/fgene.2022.953898 NA NA t3827.T003959 qrlwc-02 6 Relative Leaf Water Content (%) (RLWC) Composite Interval Mapping (CIM) RILs F8 CNC_021165.1.21676871 NA 0 0 CNC_021165.1.32146805 0 0 3.01 10.3389/fgene.2022.953898 NA NA t3827.T003960 qRWC1.1 6 Relative Water Content (RWC) Genome-Wide Composite Interval M RILs F11 S1_21926081 NA 0 0 S1_24070908 0 0 69 2.58 10.1038/s41598-023-44990-y NA NA t3827.T003961 qRWC1.1 6 Relative Water Content (RWC) Genome-Wide Composite Interval M RILs F11 S1_21926081 NA 0 0 S1_24070908 0 0 69 2.61 10.1038/s41598-023-44990-y NA NA t3827.T003962 qRWC1.1 6 Relative Water Content (RWC) Genome-Wide Composite Interval M RILs F11 S1_21926081 NA 0 0 S1_24070908 0 0 69 2.77 10.1038/s41598-023-44990-y NA NA t3827.T003963 qRWC1.1 6 Relative Water Content (RWC) Genome-Wide Composite Interval M RILs F11 S1_21926081 NA 0 0 S1_24070908 0 0 69 2.96 10.1038/s41598-023-44990-y NA NA t3827.T003964 qRWC5.1 6 Relative Water Content (RWC) Genome-Wide Composite Interval M RILs F11 S5_17323202 NA 0 0 S5_17323202 0 0 51.97 3.44 10.1038/s41598-023-44990-y NA NA t3827.T003965 qRWC5.1 6 Relative Water Content (RWC) Genome-Wide Composite Interval M RILs F11 S5_17323202 NA 0 0 S5_17323202 0 0 51.97 4.87 10.1038/s41598-023-44990-y NA NA t3827.T003966 qRWC5.1 6 Relative Water Content (RWC) Genome-Wide Composite Interval M RILs F11 S5_17323202 NA 0 0 S5_17323202 0 0 51.97 5.01 10.1038/s41598-023-44990-y NA NA t3827.T003967 qRWC5.5 6 Relative Water Content (RWC) Genome-Wide Composite Interval M RILs F11 S5_17323202 NA 0 0 S5_17323202 0 0 51.97 5.15 10.1038/s41598-023-44990-y NA NA t3827.T003968 qrdw-01 6 Root Dry Weight (RDW) Composite Interval Mapping (CIM) RILs F8 CNC_021163.1.30731371 NA 0 0 CNC_021163.1.30731330 0 0 4.5 10.3389/fgene.2022.953898 NA NA t3827.T003969 qrld-01 6 Root Length Density (RLD) Composite Interval Mapping (CIM) RILs F8 CNC_021166.1.17179431 NA 0 0 CNC_021166.1.17179406 0 0 5.13 10.3389/fgene.2022.953898 NA NA t3827.T003970 qrsr-01 6 Root-Shoot Ratio (RSR) Composite Interval Mapping (CIM) RILs F8 CNC_021161.1.14160111 NA 0 0 CNC_021161.1.28928681 0 0 3.54 10.3389/fgene.2022.953898 NA NA t3827.T003971 qrsr-02 6 Root-Shoot Ratio (RSR) Composite Interval Mapping (CIM) RILs F8 CNC_021163.1.32600157 NA 0 0 CNC_021163.1.32600103 0 0 3.19 10.3389/fgene.2022.953898 NA NA t3827.T003972 qrsr-03 6 Root-Shoot Ratio (RSR) Composite Interval Mapping (CIM) RILs F8 CNC_021164.1.32536050 NA 0 0 CNC_021164.1.32971044 0 0 3.67 10.3389/fgene.2022.953898 NA NA t3827.T003973 qrsr-04 6 Root-Shoot Ratio (RSR) Composite Interval Mapping (CIM) RILs F8 CNC_021165.1.46709195 NA 0 0 CNC_021165.1.52150911 0 0 3.66 10.3389/fgene.2022.953898 NA NA