t3711.T000001 qDB-1-1 4 Days to Bolting, Days to Bolting QTL analysis Chiifu x 49caixin FALSE nia_110 NA NA 0 0 sau_um365 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000002 qDB-1-2 4 Days to Bolting, Days to Bolting QTL analysis Chiifu x 49caixin FALSE sau_um334 NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000003 qDB-10-1 4 Days to Bolting, Days to Bolting QTL analysis Chiifu x 49caixin CSSLs nia_034 NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000004 qDB-10-2 4 Days to Bolting, Days to Bolting QTL analysis Chiifu x 49caixin CSSLs nia_112 NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000005 qDB-2-1 4 Days to Bolting QTL analysis Chiifu x 49caixin CSSLs sau_um308 NA NA 0 0 nia_104 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000006 qDB-2-2 4 Days to Bolting, Days to Bolting QTL analysis Chiifu x 49caixin FALSE cnu_295 NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000007 qDB-3-1 4 Days to Bolting, Days to Bolting QTL analysis Chiifu x 49caixin CSSLs sau_um120 NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000008 qDB-3-2 4 Days to Bolting, Days to Bolting QTL analysis Chiifu x 49caixin CSSLs cnu_320 NA NA 0 0 cnu_371 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000009 qDB-5-1 4 Days to Bolting, Days to Bolting QTL analysis Chiifu x 49caixin CSSLs nia_017 NA NA 0 0 cnu_425 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000010 qDB-5-2 4 Days to Bolting, Days to Bolting QTL analysis Chiifu x 49caixin CSSLs sau_um422 NA NA 0 0 nia_082 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000011 qDB-8-1 4 Days to Bolting, Days to Bolting QTL analysis Chiifu x 49caixin CSSLs BRMS033 NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000012 qDB-9-1 4 Days to Bolting, Days to Bolting QTL analysis Chiifu x 49caixin CSSLs cnu_406 NA NA 0 0 nia_011 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000013 qDB-9-2 4 Days to Bolting, Days to Bolting QTL analysis Chiifu x 49caixin CSSLs nia_044 NA NA 0 0 sau_um138 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000014 qDB-9-3 4 Days to Bolting, Days to Bolting QTL analysis Chiifu x 49caixin CSSLs sau_um445 NA NA 0 0 sau_um111 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000015 qDF-1-1 4 Days to Flowering, Days to Flowering QTL analysis Chiifu x 49caixin CSSLs nia_110 NA NA 0 0 sau_um365 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000016 qDF-1-2 4 Days to Flowering, Days to Flowering QTL analysis Chiifu x 49caixin CSSLs sau_um334 NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000017 qDF-10-1 4 Days to Flowering, Days to Flowering QTL analysis Chiifu x 49caixin FALSE nia_034 NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000018 qDF-10-2 4 Days to Flowering, Days to Flowering QTL analysis Chiifu x 49caixin FALSE nia_122 NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000019 qDF-2-1 4 Days to Flowering, Days to Flowering QTL analysis Chiifu x 49caixin CSSLs sau_um308 NA NA 0 0 nia_104 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000020 qDF-2-2 4 Days to Flowering, Days to Flowering QTL analysis Chiifu x 49caixin FALSE sau_um143 NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000021 qDF-3-1 4 Days to Flowering, Days to Flowering QTL analysis Chiifu x 49caixin FALSE sau_um305 NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000022 qDF-3-2 4 Days to Flowering, Days to Flowering QTL analysis Chiifu x 49caixin FALSE sau_um120 NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000023 qDF-3-3 4 Days to Flowering, Days to Flowering QTL analysis Chiifu x 49caixin FALSE cnu_320 NA NA 0 0 cnu_371 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000024 qDF-3-4 4 Days to Flowering, Days to Flowering QTL analysis Chiifu x 49caixin FALSE nia_093 NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000025 qDF-5-1 4 Days to Flowering, Days to Flowering QTL analysis Chiifu x 49caixin FALSE nia_017 NA NA 0 0 cnu_425 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000026 qDF-5-2 4 Days to Flowering, Days to Flowering QTL analysis Chiifu x 49caixin FALSE sau_um422 NA NA 0 0 nia_082 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000027 qDF-6-1 4 Days to Flowering, Days to Flowering QTL analysis Chiifu x 49caixin FALSE sau_um061 NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000028 qDF-8-1 4 Days to Flowering, Days to Flowering QTL analysis Chiifu x 49caixin CSSLs BRMS033 NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000029 qDF-9-1 4 Days to Flowering, Days to Flowering QTL analysis Chiifu x 49caixin FALSE cnu_406 NA NA 0 0 nia_011 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000030 qDF-9-2 4 Days to Flowering, Days to Flowering QTL analysis Chiifu x 49caixin FALSE nia_044 NA NA 0 0 sau_um138 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000031 qDF-9-3 4 Days to Flowering, Days to Flowering QTL analysis Chiifu x 49caixin CSSLs NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000032 qFSD-1-1 6 Flowering Stalk Diameter, Flowering Stalk Diameter QTL analysis Chiifu x 49caixin FALSE nia_110 NA NA 0 0 sau_um365 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000033 qFSD-10-1 6 Flowering Stalk Diameter, Flowering Stalk Diameter QTL analysis Chiifu x 49caixin FALSE nia_112 NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000034 qFSD-3-1 6 Flowering Stalk Diameter, Flowering Stalk Diameter QTL analysis Chiifu x 49caixin FALSE nia_093 NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000035 qFSD-8-1 6 Flowering Stalk Diameter, Flowering Stalk Diameter QTL analysis Chiifu x 49caixin FALSE BRMS033 NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000036 qFSD-8-2 6 Flowering Stalk Diameter, Flowering Stalk Diameter QTL analysis Chiifu x 49caixin FALSE sau_um494 NA NA 0 0 cnu_MBrpgm0178 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000037 qLW-2-1 6 Leaf Width, Leaf Width QTL analysis Chiifu x 49caixin FALSE sau_um308 NA NA 0 0 nia_104 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000038 qLW-6-1 6 Leaf Width, Leaf Width QTL analysis Chiifu x 49caixin FALSE mENA5a NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000039 qPD-10-1 6 Plant Diameter, Plant Diameter QTL analysis Chiifu x 49caixin FALSE sau_um314 NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000040 qPD-2-1 6 Plant Diameter, Plant Diameter QTL analysis Chiifu x 49caixin FALSE sau_um308 NA NA 0 0 nia_104 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000041 qPD-6-1 6 Plant Diameter, Plant Diameter QTL analysis Chiifu x 49caixin FALSE cnu_149 NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000042 qPD-6-2 6 Plant Diameter, Plant Diameter QTL analysis Chiifu x 49caixin FALSE mENA5a NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000043 qPD-8-1 6 Plant Diameter, Plant Diameter QTL analysis Chiifu x 49caixin FALSE sau_um494 NA NA 0 0 cnu_MBrpgm0178 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000044 qPD-9-1 6 Plant Diameter, Plant Diameter QTL analysis Chiifu x 49caixin FALSE cnu_046 NA NA 0 0 nia_011 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000045 qPH-1-1 6 Plant Height, Plant Height QTL analysis Chiifu x 49caixin FALSE nia_110 NA NA 0 0 sau_um365 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000046 qPH-1-2 6 Plant Height, Plant Height QTL analysis Chiifu x 49caixin FALSE sau_um367 NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000047 qPH-10-1 6 Plant Height, Plant Height QTL analysis Chiifu x 49caixin FALSE sau_um124 NA NA 0 0 sau_um314 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000048 qPH-10-2 6 Plant Height, Plant Height QTL analysis Chiifu x 49caixin FALSE nia_122 NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000049 qPH-2-1 6 Plant Height, Plant Height QTL analysis Chiifu x 49caixin FALSE sau_um458 NA NA 0 0 sau_um434 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000050 qPH-2-2 6 Plant Height, Plant Height QTL analysis Chiifu x 49caixin FALSE sau_um528 NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000051 qPH-3-1 6 Plant Height, Plant Height QTL analysis Chiifu x 49caixin FALSE sau_um305 NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000052 qPH-3-2 6 Plant Height, Plant Height QTL analysis Chiifu x 49caixin FALSE cnu_327 NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000053 qPH-3-3 6 Plant Height, Plant Height QTL analysis Chiifu x 49caixin FALSE sau_um146 NA NA 0 0 sau_um026 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000054 qPH-5-1 6 Plant Height, Plant Height QTL analysis Chiifu x 49caixin FALSE nia_107 NA NA 0 0 cnu_425 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000055 qPH-6-1 6 Plant Height, Plant Height QTL analysis Chiifu x 49caixin FALSE sau_um181 NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000056 qPH-6-2 6 Plant Height, Plant Height QTL analysis Chiifu x 49caixin FALSE mENA5a NA NA 0 0 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000057 qPH-8-1 6 Plant Height, Plant Height QTL analysis Chiifu x 49caixin FALSE sau_um494 NA NA 0 0 cnu_MBrpgm0178 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000058 qPH-9-1 6 Plant Height, Plant Height QTL analysis Chiifu x 49caixin FALSE cnu_406 NA NA 0 0 nia_011 NA 0 0 10.3389/fpls.2015.00432 NA NA t3711.T000059 10au-BIQTL1 4 Bolting index, BI (bolting index) under vernalizing conditions QTL analysis 08A061 (P1) x 09A001 (P2) F2:3 NA NA 0 0 NA 0 0 5.01 21.88 10.4238/2014.May.23.3 NA NA t3711.T000060 10au-BIQTL2 4 Bolting index, BI (bolting index) under vernalizing conditions QTL analysis 08A061 (P1) x 09A001 (P2) F2:3 NA NA 0 0 NA 0 0 16.46 4.32 10.4238/2014.May.23.3 NA NA t3711.T000061 10au-BIQTL3 4 Bolting index, BI (bolting index) under vernalizing conditions QTL analysis 08A061 (P1) x 09A001 (P2) F2:3 NA NA 0 0 NA 0 0 73.8 4.78 10.4238/2014.May.23.3 NA NA t3711.T000062 10au-BIQTL4 4 Bolting index, BI (bolting index) under vernalizing conditions QTL analysis 08A061 (P1) x 09A001 (P2) F2:3 NA NA 0 0 NA 0 0 77.6 6.12 10.4238/2014.May.23.3 NA NA t3711.T000063 10au-BIQTL5 4 Bolting index, BI (bolting index) under vernalizing conditions QTL analysis 08A061 (P1) x 09A001 (P2) F2:3 NA NA 0 0 NA 0 0 93.96 2.63 10.4238/2014.May.23.3 NA NA t3711.T000064 10au-BIQTL6 4 Bolting index, BI (bolting index) under vernalizing conditions QTL analysis 08A061 (P1) x 09A001 (P2) F2:3 NA NA 0 0 NA 0 0 100.4 2.76 10.4238/2014.May.23.3 NA NA t3711.T000065 10au-BIQTL7 4 Bolting index, BI (bolting index) under vernalizing conditions QTL analysis 08A061 (P1) x 09A001 (P2) F2:3 NA NA 0 0 NA 0 0 88.89 2.79 10.4238/2014.May.23.3 NA NA t3711.T000066 10au-BIQTL8 4 Bolting index, BI (bolting index) under vernalizing conditions QTL analysis 08A061 (P1) x 09A001 (P2) F2:3 NA NA 0 0 NA 0 0 84.87 2.68 10.4238/2014.May.23.3 NA NA t3711.T000067 10au-FTQTL1 4 Flowering time, FT (flowering time) under vernalizing conditions QTL analysis 08A061 (P1) x 09A001 (P2) F2:3 NA NA 0 0 NA 0 0 83.73 3.29 10.4238/2014.May.23.3 NA NA t3711.T000068 10au-FTQTL3 4 Flowering time, FT (flowering time) under vernalizing conditions QTL analysis 08A061 (P1) x 09A001 (P2) F2:3 NA NA 0 0 NA 0 0 51.83 2.58 10.4238/2014.May.23.3 NA NA t3711.T000069 10au-FTQTL4 4 Flowering time, FT (flowering time) under vernalizing conditions QTL analysis 08A061 (P1) x 09A001 (P2) F2:3 NA NA 0 0 NA 0 0 58.34 3.26 10.4238/2014.May.23.3 NA NA t3711.T000070 10sp-BIQTL1 4 Bolting index, BI (bolting index) under vernalizing conditions QTL analysis 08A061 (P1) x 09A001 (P2) F2 NA NA 0 0 NA 0 0 2.01 8.05 10.4238/2014.May.23.3 NA NA t3711.T000071 10sp-BIQTL2 4 Bolting index, BI (bolting index) under vernalizing conditions QTL analysis 08A061 (P1) x 09A001 (P2) F2 NA NA 0 0 NA 0 0 96.8 6.68 10.4238/2014.May.23.3 NA NA t3711.T000072 10sp-BIQTL3 4 Bolting index, BI (bolting index) under vernalizing conditions QTL analysis 08A061 (P1) x 09A001 (P2) F2 NA NA 0 0 NA 0 0 83.8 2.45 10.4238/2014.May.23.3 NA NA t3711.T000073 10sp-BIQTL4 4 Bolting index, BI (bolting index) under vernalizing conditions QTL analysis 08A061 (P1) x 09A001 (P2) F2 NA NA 0 0 NA 0 0 35.1 2.53 10.4238/2014.May.23.3 NA NA t3711.T000074 10sp-FTQTL1 4 Flowering time, FT (flowering time) under vernalizing conditions QTL analysis 08A061 (P1) x 09A001 (P2) F2 NA NA 0 0 NA 0 0 0.01 3.87 10.4238/2014.May.23.3 NA NA t3711.T000075 10sp-FTQTL2 4 Flowering time, FT (flowering time) under vernalizing conditions QTL analysis 08A061 (P1) x 09A001 (P2) F2 NA NA 0 0 NA 0 0 16.46 2.54 10.4238/2014.May.23.3 NA NA t3711.T000076 10sp-FTQTL3 4 Flowering time, FT (flowering time) under vernalizing conditions QTL analysis 08A061 (P1) x 09A001 (P2) F2 NA NA 0 0 NA 0 0 30.77 6.11 10.4238/2014.May.23.3 NA NA t3711.T000077 10sp-FTQTL4 4 Flowering time, FT (flowering time) under vernalizing conditions QTL analysis 08A061 (P1) x 09A001 (P2) F2 NA NA 0 0 NA 0 0 45.77 2.96 10.4238/2014.May.23.3 NA NA t3711.T000078 10sp-FTQTL5 4 Flowering time, FT (flowering time) under vernalizing conditions QTL analysis 08A061 (P1) x 09A001 (P2) F2 NA NA 0 0 NA 0 0 83.8 4.79 10.4238/2014.May.23.3 NA NA t3711.T000079 11sp-BIQTL1 4 Bolting index, BI (bolting index) under vernalizing conditions QTL analysis 08A061 (P1) x 09A001 (P2) F2:3 NA NA 0 0 NA 0 0 0.01 13.2 10.4238/2014.May.23.3 NA NA t3711.T000080 11sp-BIQTL2 4 Bolting index, BI (bolting index) under vernalizing conditions QTL analysis 08A061 (P1) x 09A001 (P2) F2:3 NA NA 0 0 NA 0 0 11.99 3.48 10.4238/2014.May.23.3 NA NA t3711.T000081 11sp-BIQTL3 4 Bolting index, BI (bolting index) under vernalizing conditions QTL analysis 08A061 (P1) x 09A001 (P2) F2:3 NA NA 0 0 NA 0 0 19.7 3.43 10.4238/2014.May.23.3 NA NA t3711.T000082 11sp-BIQTL4 4 Bolting index, BI (bolting index) under vernalizing conditions QTL analysis 08A061 (P1) x 09A001 (P2) F2:3 NA NA 0 0 NA 0 0 92.96 5.01 10.4238/2014.May.23.3 NA NA t3711.T000083 11sp-BIQTL5 4 Bolting index, BI (bolting index) under vernalizing conditions QTL analysis 08A061 (P1) x 09A001 (P2) F2:3 NA NA 0 0 NA 0 0 96.8 5.08 10.4238/2014.May.23.3 NA NA t3711.T000084 11sp-BIQTL6 4 Bolting index, BI (bolting index) under vernalizing conditions QTL analysis 08A061 (P1) x 09A001 (P2) F2:3 NA NA 0 0 NA 0 0 83.8 3.88 10.4238/2014.May.23.3 NA NA t3711.T000085 BraDM 1 Downy mildew resistance, seedling resistance to downy mildew QTL analysis 91-112 x T12-19 DH PGM NA NA 0 0 K14-1030 NA 0 0 17.2 10.1007/s11032-009-9257-z NA NA t3711.T000086 Tu1 1 Turnip mosaic virus (TuMV) resistance, Turnip mosaic virus (TuMV) resistance (seedling stage) QTL analysis 91-112 x T12-19 DH A04-850 NA NA 0 0 CA_TG270 NA 0 0 70.4 19.71 10.1111/j.1439-0523.2007.01431.x NA NA t3711.T000087 Tu2 1 Turnip mosaic virus (TuMV) resistance, Turnip mosaic virus (TuMV) resistance (seedling stage) QTL analysis 91-112 x T12-19 DH X12 NA NA 0 0 850 NA 0 0 0 3.46 10.1111/j.1439-0523.2007.01431.x NA NA t3711.T000088 Tu3 1 Turnip mosaic virus (TuMV) resistance, Turnip mosaic virus (TuMV) resistance (adult stage) QTL analysis 91-112 x T12-19 DH U10-1500 NA NA 0 0 CA_TC127 NA 0 0 58.7 14.39 10.1111/j.1439-0523.2007.01431.x NA NA t3711.T000089 Tu4 1 Turnip mosaic virus (TuMV) resistance, Turnip mosaic virus (TuMV) resistance (adult stage) QTL analysis 91-112 x T12-19 DH CT_TC710 NA NA 0 0 NA 0 0 96.3 8.36 10.1111/j.1439-0523.2007.01431.x NA NA t3711.T000090 5 Linolenic acid content QTL analysis 93561-2 x Sv3402 F2 OPS-01 NA NA 0 0 OPJ-20 NA 0 0 5.8 10.1023/A:1020357211089 NA NA t3711.T000091 5 Linolenic acid content QTL analysis 93561-2 x Sv3402 F2 OPO-03 NA NA 0 0 NA 0 0 5.3 10.1023/A:1020357211089 NA NA t3711.T000092 5 Linolenic acid content QTL analysis 93561-2 x Sv3402 F2 OPP-05, OPG-16 NA NA 0 0 NA 0 0 5.2 10.1023/A:1020357211089 NA NA t3711.T000093 BT1 4 Bolting time QTL analysis A9408 x Homei P09 DH A68e NA NA 0 0 NA 0 0 2.4 10.1270/jsbbs.55.127 NA NA t3711.T000094 BT1 4 Bolting time QTL analysis A9408 x Homei P09 DH A03d NA NA 0 0 NA 0 0 34.5 10.1270/jsbbs.55.127 NA NA t3711.T000095 BT1 4 Bolting time QTL analysis A9408 x Homei P09 DH A57b NA NA 0 0 NA 0 0 2.5 10.1270/jsbbs.55.127 NA NA t3711.T000096 BT1 4 Bolting time QTL analysis A9408 x Homei P09 DH A32a NA NA 0 0 NA 0 0 2.7 10.1270/jsbbs.55.127 NA NA t3711.T000097 BT1 4 Bolting time QTL analysis A9408 x Homei P09 DH A47a NA NA 0 0 NA 0 0 2.7 10.1270/jsbbs.55.127 NA NA t3711.T000098 BT1 4 Bolting time QTL analysis A9408 x Homei P09 DH A47c NA NA 0 0 NA 0 0 2.4 10.1270/jsbbs.55.127 NA NA t3711.T000099 BT10 4 Bolting time QTL analysis A9408 x Homei P09 DH A10a NA NA 0 0 NA 0 0 5.8 10.1270/jsbbs.55.127 NA NA t3711.T000100 BT2 4 Bolting time QTL analysis A9408 x Homei P09 DH A03d NA NA 0 0 NA 0 0 29.3 10.1270/jsbbs.55.127 NA NA t3711.T000101 BT3 4 Bolting time QTL analysis A9408 x Homei P09 DH A03d NA NA 0 0 NA 0 0 6.7 10.1270/jsbbs.55.127 NA NA t3711.T000102 BT4 4 Bolting time QTL analysis A9408 x Homei P09 DH A03d NA NA 0 0 NA 0 0 28.7 10.1270/jsbbs.55.127 NA NA t3711.T000103 BT5 4 Bolting time QTL analysis A9408 x Homei P09 DH A03d NA NA 0 0 NA 0 0 23 10.1270/jsbbs.55.127 NA NA t3711.T000104 BT6 4 Bolting time QTL analysis A9408 x Homei P09 DH A04a NA NA 0 0 NA 0 0 8.7 10.1270/jsbbs.55.127 NA NA t3711.T000105 BT7 4 Bolting time QTL analysis A9408 x Homei P09 DH A48d NA NA 0 0 NA 0 0 4.4 10.1270/jsbbs.55.127 NA NA t3711.T000106 BT8 4 Bolting time QTL analysis A9408 x Homei P09 DH A76c NA NA 0 0 NA 0 0 5.3 10.1270/jsbbs.55.127 NA NA t3711.T000107 BT9 4 Bolting time QTL analysis A9408 x Homei P09 DH A76c NA NA 0 0 NA 0 0 6.4 10.1270/jsbbs.55.127 NA NA t3711.T000108 RDF10-0 4 Days to flowering QTL analysis BARI-6 x PI633165 F2 BrPB_658039, BrPB_671150, BrPB_8 NA NA 0 0 NA 0 0 0 4.551 10.1111/pbr.12165 NA NA t3711.T000109 RLC6-04 1 Leaf chlorosis QTL analysis BARI-6 x PI633165 F2 BrPB_658956 NA NA 0 0 BrPB_819069 NA 0 0 0 15.213 10.1111/pbr.12165 NA NA t3711.T000110 RLH6-0 4 Leaf hair QTL analysis BARI-6 x PI633165 F2 BrPB_657681, BrPB_658037 NA NA 0 0 NA 0 0 0 7.174 10.1111/pbr.12165 NA NA t3711.T000111 RLH9-16 4 Leaf hair QTL analysis BARI-6 x PI633165 F2 BrPB_661605 NA NA 0 0 BrPB_661660 NA 0 0 16 4.374 10.1111/pbr.12165 NA NA t3711.T000112 RSAn12-157 5 Seedling anthocyanin content QTL analysis BARI-6 x PI633165 F2 BrPB_661605 NA NA 0 0 BrPB_661660 NA 0 0 152 2.59 10.1111/pbr.12165 NA NA t3711.T000113 RSC1-2 4 Seed colour QTL analysis BARI-6 x PI633165 F2 BrPB_663594 NA NA 0 0 BrPB_661418 NA 0 0 2 3.235 10.1111/pbr.12165 NA NA t3711.T000114 RSC12-56 4 Seed colour QTL analysis BARI-6 x PI633165 F2 BrPB_662948 NA NA 0 0 BrPB_809141 NA 0 0 56 3.006 10.1111/pbr.12165 NA NA t3711.T000115 4 Leafy heads trait, Head weight QTL analysis Bre x Wut RIL NA NA 0 0 NA 0 0 234.7 4.8 10.1371/journal.pone.0076059 NA NA t3711.T000116 4 Leafy heads trait, Head height-to-diameter ratio QTL analysis Bre x Wut RIL NA NA 0 0 NA 0 0 387.5 6.167 10.1371/journal.pone.0076059 NA NA t3711.T000117 4 Leafy heads trait, Heading time QTL analysis Bre x Wut RIL NA NA 0 0 NA 0 0 857.5 6.84 10.1371/journal.pone.0076059 NA NA t3711.T000118 4 Leafy heads trait, Head diameter QTL analysis Bre x Wut RIL NA NA 0 0 NA 0 0 630.5 6.048 10.1371/journal.pone.0076059 NA NA t3711.T000119 4 Leafy heads trait, Trichome QTL analysis Bre x Wut RIL NA NA 0 0 NA 0 0 667.4 43.296 10.1371/journal.pone.0076059 NA NA t3711.T000120 4 Leafy heads trait, Heading time QTL analysis Bre x Wut RIL NA NA 0 0 NA 0 0 239.5 10.028 10.1371/journal.pone.0076059 NA NA t3711.T000121 4 Leafy heads trait, Leaf wing QTL analysis Bre x Wut RIL NA NA 0 0 NA 0 0 447.8 4.62 10.1371/journal.pone.0076059 NA NA t3711.T000122 4 Leafy heads trait, Head weight QTL analysis Bre x Wut RIL NA NA 0 0 NA 0 0 367.3 5.056 10.1371/journal.pone.0076059 NA NA t3711.T000123 1 Clubroot resistance, clubroot resistance (CR) against Plasmodiophora brassicae K04 QTL analysis C9 x 6R F2 E14M3-02 NA NA 0 0 NA 0 0 22.5 24 10.1007/s00122-008-0817-0 NA NA t3711.T000124 qDB1 4 Bolting time QTL analysis CRF3 F2:3 cnu_m616a BrapaV3.0 A02 721260 721528 At5g12290 NA 0 0 0 4.8 10.1093/dnares/dss029 t3711.M001125.1 NA t3711.T000125 qDB1 4 Bolting time QTL analysis CRF3 F2:3 cnu_m335a BrapaV3.0 A08 19606371 19606574 nia_m050a A08 20695288 20695670 80.6 4.88 10.1093/dnares/dss029 t3711.M003839.1 t3711.M001152.1 t3711.T000126 qDB1 4 Bolting time QTL analysis CRF3 F2:3 cnu_m372a BrapaV3.0 A09 34123484 34123659 cnu_m016a A09 34990756 34990924 103.9 5.11 10.1093/dnares/dss029 t3711.M001076.1 t3711.M001006.1 t3711.T000127 qDB1 4 Bolting time QTL analysis CRF3 F2:3 ACMP00598 BrapaV3.0 A10 15798743 15799010 cnu_mBRPGM1219a NA 0 0 56 7.48 10.1093/dnares/dss029 t3711.M001942.1 NA t3711.T000128 qDB10 4 Bolting time QTL analysis CRF3 F2:3 cnu_m056a BrapaV3.0 A07 26030383 26030580 cnu_m308a A07 28362375 28362599 84 15.2 10.1093/dnares/dss029 t3711.M003681.1 t3711.M001059.1 t3711.T000129 qDB2 4 Bolting time QTL analysis CRF3 F2:3 cnu_m036a_ SNP NA NA 0 0 CKX3a NA 0 0 19 6.89 10.1093/dnares/dss029 NA NA t3711.T000130 qDB3 4 Bolting time QTL analysis CRF3 F2:3 cnu_m036a_ SNP NA NA 0 0 CKX3a NA 0 0 19 7.51 10.1093/dnares/dss029 NA NA t3711.T000131 qDB4 4 Bolting time QTL analysis CRF3 F2:3 SNP-CKX3a BrapaV3.0 A02 6286170 6286372 ACMP00696 NA 0 0 38.6 4.55 10.1093/dnares/dss029 t3711.M002408.1 t3711.M002022.1 t3711.T000132 qDB5 4 Bolting time QTL analysis CRF3 F2:3 cnu_m288a BrapaV3.0 A03 9986707 9986860 cnu_m213a A07 3878431 3878611 40.3 5.27 10.1093/dnares/dss029 t3711.M001053.1 t3711.M003772.1 t3711.T000133 qDB6 4 Bolting time QTL analysis CRF3 F2:3 cnu_m288a BrapaV3.0 A03 9986707 9986860 cnu_m213a A07 3878431 3878611 40.3 3.05 10.1093/dnares/dss029 t3711.M001053.1 t3711.M003772.1 t3711.T000134 qDB7 4 Bolting time QTL analysis CRF3 F2:3 ACMP00276 BrapaV3.0 A06 11113040 11113556 At2g18040 NA 0 0 21 3.48 10.1093/dnares/dss029 t3711.M001684.1 NA t3711.T000135 qDB8 4 Bolting time QTL analysis CRF3 F2:3 cnu_m062a BrapaV3.0 A07 809502 809705 ACMP00745 NA 0 0 10 4.3 10.1093/dnares/dss029 t3711.M001017.1 t3711.M002062.1 t3711.T000136 qDB9 4 Bolting time QTL analysis CRF3 F2:3 cnu_m056a BrapaV3.0 A07 26030383 26030580 cnu_m308a A07 28362375 28362599 84 7.04 10.1093/dnares/dss029 t3711.M003681.1 t3711.M001059.1 t3711.T000137 qFT1 6 Flowering time QTL analysis CRF3 F2:3 cnu_m143a BrapaV3.0 A01 1997406 1997597 cnu_m142a A01 1997973 1998173 21.6 3.23 10.1093/dnares/dss029 t3711.M003743.1 t3711.M001026.1 t3711.T000138 qFT1 6 Flowering time QTL analysis CRF3 F2:3 cnu_m036a BrapaV3.0 A02 9645085 9645249 SNP-CKX3a A02 6286170 6286372 17 14.2 10.1093/dnares/dss029 t3711.M003670.1 t3711.M002408.1 t3711.T000139 qFT1 6 Flowering time QTL analysis CRF3 F2:3 nia_m023a BrapaV3.0 A03 1672951 1673316 At5g59140 NA 0 0 5 4.38 10.1093/dnares/dss029 t3711.M003604.1 NA t3711.T000140 qFT1 6 Flowering time QTL analysis CRF3 F2:3 cnu_m381a BrapaV3.0 A05 4197743 4198013 ACMP00659 A05 9793186 9793407 66 3.55 10.1093/dnares/dss029 t3711.M003866.1 t3711.M001992.1 t3711.T000141 qFT1 6 Flowering time QTL analysis CRF3 F2:3 At2g18040 NA NA 0 0 ACMP00736 A06 23734074 23734286 35.5 3.1 10.1093/dnares/dss029 NA t3711.M002053.1 t3711.T000142 qFT1 6 Flowering time QTL analysis CRF3 F2:3 cnu_m136a NA NA 0 0 cnu_m308a A07 28362375 28362599 83.6 13.63 10.1093/dnares/dss029 t3711.M004057.1 t3711.M001059.1 t3711.T000143 qFT1 6 Flowering time QTL analysis CRF3 F2:3 ACMP00731 BrapaV3.0 A09 30862273 30862491 nia_m088a A09 36666435 36666720 102 5.3 10.1093/dnares/dss029 t3711.M002049.1 t3711.M001170.1 t3711.T000144 qFT1 6 Flowering time QTL analysis CRF3 F2:3 ACMP00598 BrapaV3.0 A10 15798743 15799010 cnu_mBRPGM0092a NA 0 0 54.3 8.16 10.1093/dnares/dss029 t3711.M001942.1 NA t3711.T000145 qFT10 6 Flowering time QTL analysis CRF3 F2:3 At2g18040 NA NA 0 0 ACMP00736 A06 23734074 23734286 35.5 3.53 10.1093/dnares/dss029 NA t3711.M002053.1 t3711.T000146 qFT11 6 Flowering time QTL analysis CRF3 F2:3 cnu_mBRPGM1428a NA NA 0 0 At2g19560 NA 0 0 4.8 4.17 10.1093/dnares/dss029 NA NA t3711.T000147 qFT12 6 Flowering time QTL analysis CRF3 F2:3 cnu_m136a NA NA 0 0 cnu_m308a A07 28362375 28362599 83.6 16 10.1093/dnares/dss029 t3711.M004057.1 t3711.M001059.1 t3711.T000148 qFT13 6 Flowering time QTL analysis CRF3 F2:3 cnu_m136a NA NA 0 0 cnu_m308a A07 28362375 28362599 83.6 10.86 10.1093/dnares/dss029 t3711.M004057.1 t3711.M001059.1 t3711.T000149 qFT14 6 Flowering time QTL analysis CRF3 F2:3 ACMP00731 BrapaV3.0 A09 30862273 30862491 cnu_m372a A09 34123484 34123659 95 5.19 10.1093/dnares/dss029 t3711.M002049.1 t3711.M001076.1 t3711.T000150 qFT2 6 Flowering time QTL analysis CRF3 F2:3 cnu_m616a BrapaV3.0 A02 721260 721528 At5g12290 NA 0 0 0 3.6 10.1093/dnares/dss029 t3711.M001125.1 NA t3711.T000151 qFT3 6 Flowering time QTL analysis CRF3 F2:3 cnu_m616a BrapaV3.0 A02 721260 721528 At5g12290 NA 0 0 0 3.14 10.1093/dnares/dss029 t3711.M001125.1 NA t3711.T000152 qFT4 6 Flowering time QTL analysis CRF3 F2:3 cnu_m036a BrapaV3.0 A02 9645085 9645249 SNP-CKX3a A02 6286170 6286372 17 18 10.1093/dnares/dss029 t3711.M003670.1 t3711.M002408.1 t3711.T000153 qFT5 6 Flowering time QTL analysis CRF3 F2:3 cnu_m036a BrapaV3.0 A02 9645085 9645249 SNP-CKX3a A02 6286170 6286372 17 13 10.1093/dnares/dss029 t3711.M003670.1 t3711.M002408.1 t3711.T000154 qFT6 6 Flowering time QTL analysis CRF3 F2:3 SNP-CKX3a BrapaV3.0 A02 6286170 6286372 ACMP00696 NA 0 0 38.6 12.7 10.1093/dnares/dss029 t3711.M002408.1 t3711.M002022.1 t3711.T000155 qFT7 6 Flowering time QTL analysis CRF3 F2:3 nia_m023a BrapaV3.0 A03 1672951 1673316 At5g59140 NA 0 0 5 6.02 10.1093/dnares/dss029 t3711.M003604.1 NA t3711.T000156 qFT8 6 Flowering time QTL analysis CRF3 F2:3 cnu_m288a BrapaV3.0 A03 9986707 9986860 cnu_m213a A07 3878431 3878611 47.1 4.76 10.1093/dnares/dss029 t3711.M001053.1 t3711.M003772.1 t3711.T000157 qFT9 6 Flowering time QTL analysis CRF3 F2:3 cnu_m381a BrapaV3.0 A05 4197743 4198013 ACMP00659 A05 9793186 9793407 66 7.22 10.1093/dnares/dss029 t3711.M003866.1 t3711.M001992.1 t3711.T000158 qLL1 4 Leaf length QTL analysis CRF3 F2:3 cnu_m616a BrapaV3.0 A02 721260 721528 At5g12290 NA 0 0 0 7.25 10.1093/dnares/dss029 t3711.M001125.1 NA t3711.T000159 qLL1 4 Leaf length QTL analysis CRF3 F2:3 ACMP00598 BrapaV3.0 A10 15798743 15799010 nia_m100a A10 17473696 17473964 53 10.95 10.1093/dnares/dss029 t3711.M001942.1 t3711.M001177.1 t3711.T000160 qLL2 4 Leaf length QTL analysis CRF3 F2:3 cnu_m616a BrapaV3.0 A02 721260 721528 At5g12290 NA 0 0 0 5.02 10.1093/dnares/dss029 t3711.M001125.1 NA t3711.T000161 qLL3 4 Leaf length QTL analysis CRF3 F2:3 cnu_m288a BrapaV3.0 A03 9986707 9986860 cnu_m213a A07 3878431 3878611 39 9.76 10.1093/dnares/dss029 t3711.M001053.1 t3711.M003772.1 t3711.T000162 qLL4 4 Leaf length QTL analysis CRF3 F2:3 ACMP00859 BrapaV3.0 A10 3876128 3876405 cnu_m492a A03 24900138 24900400 92.7 9.35 10.1093/dnares/dss029 t3711.M002149.1 t3711.M003582.1 t3711.T000163 qLL5 4 Leaf length QTL analysis CRF3 F2:3 cnu_m524a BrapaV3.0 A04 19221402 19221694 cnu_mBRPGM0882a NA 0 0 86.6 5.23 10.1093/dnares/dss029 t3711.M001108.1 NA t3711.T000164 qLL6 4 Leaf length QTL analysis CRF3 F2:3 ACMP00551 BrapaV3.0 A08 2782039 2782228 cnu_m090a A08 9142618 9142816 32.8 2.7 10.1093/dnares/dss029 t3711.M001904.1 t3711.M001020.1 t3711.T000165 qLW1 6 Leaf width QTL analysis CRF3 F2:3 cnu_mBRPGM1432a NA NA 0 0 cnu_mBRPGM1191a NA 0 0 36.7 4.03 10.1093/dnares/dss029 NA NA t3711.T000166 qLW1 6 Leaf width QTL analysis CRF3 F2:3 cnu_m176a BrapaV3.0 A08 19117775 19118073 cnu_m338a A08 17532952 17533122 47.2 3.45 10.1093/dnares/dss029 t3711.M003762.1 t3711.M001068.1 t3711.T000167 qLW1 6 Leaf width QTL analysis CRF3 F2:3 ACMP00554 BrapaV3.0 A09 33064757 33064935 cnu_m402a A09 32446680 32446966 98.9 3.6 10.1093/dnares/dss029 t3711.M001907.1 t3711.M001084.1 t3711.T000168 qLW10 6 Leaf width QTL analysis CRF3 F2:3 ACMP00679 BrapaV3.0 A07 17206332 17206600 cnu_m511a A07 20705098 20705304 42.4 3.92 10.1093/dnares/dss029 t3711.M002007.1 t3711.M003952.1 t3711.T000169 qLW2 6 Leaf width QTL analysis CRF3 F2:3 cnu_mBRPGM1432a NA NA 0 0 cnu_mBRPGM1191a NA 0 0 36.7 3.2 10.1093/dnares/dss029 NA NA t3711.T000170 qLW3 6 Leaf width QTL analysis CRF3 F2:3 cnu_m616a BrapaV3.0 A02 721260 721528 At5g12290 NA 0 0 0 8.59 10.1093/dnares/dss029 t3711.M001125.1 NA t3711.T000171 qLW4 6 Leaf width QTL analysis CRF3 F2:3 cnu_m616a BrapaV3.0 A02 721260 721528 At5g12290 NA 0 0 0 4.31 10.1093/dnares/dss029 t3711.M001125.1 NA t3711.T000172 qLW5 6 Leaf width QTL analysis CRF3 F2:3 nia_m079a BrapaV3.0 A03 7728097 7728328 cnu_m213a A07 3878431 3878611 42.6 8.71 10.1093/dnares/dss029 t3711.M001164.1 t3711.M003772.1 t3711.T000173 qLW6 6 Leaf width QTL analysis CRF3 F2:3 nia_m079a BrapaV3.0 A03 7728097 7728328 cnu_m213a A07 3878431 3878611 42.6 4.2 10.1093/dnares/dss029 t3711.M001164.1 t3711.M003772.1 t3711.T000174 qLW7 6 Leaf width QTL analysis CRF3 F2:3 ACMP00859 BrapaV3.0 A10 3876128 3876405 cnu_m492a A03 24900138 24900400 95.8 6.53 10.1093/dnares/dss029 t3711.M002149.1 t3711.M003582.1 t3711.T000175 qLW8 6 Leaf width QTL analysis CRF3 F2:3 cnu_m483a BrapaV3.0 A06 10000838 10001103 ACMP00494 A06 23280424 23280767 25 5.16 10.1093/dnares/dss029 t3711.M001102.1 t3711.M001863.1 t3711.T000176 qLW9 6 Leaf width QTL analysis CRF3 F2:3 cnu_m440a BrapaV3.0 A07 291367 291660 At2g16860 NA 0 0 0 3.46 10.1093/dnares/dss029 t3711.M003577.1 NA t3711.T000177 qMRL1 4 Midrib length QTL analysis CRF3 F2:3 At4g35530a NA NA 0 0 nia_m110a A01 103490 103742 0.5 5.7 10.1093/dnares/dss029 NA t3711.M001181.1 t3711.T000178 qMRL10 4 Midrib length QTL analysis CRF3 F2:3 ACMP00598 BrapaV3.0 A10 15798743 15799010 At5g11960 NA 0 0 57.7 4.98 10.1093/dnares/dss029 t3711.M001942.1 NA t3711.T000179 qMRL2 4 Midrib length QTL analysis CRF3 F2:3 cnu_m616a BrapaV3.0 A02 721260 721528 At5g12290 NA 0 0 0 3.53 10.1093/dnares/dss029 t3711.M001125.1 NA t3711.T000180 qMRL3 4 Midrib length QTL analysis CRF3 F2:3 nia_m079a BrapaV3.0 A03 7728097 7728328 ACMP00087 A03 11048575 11048726 39.3 5.94 10.1093/dnares/dss029 t3711.M001164.1 t3711.M001536.1 t3711.T000181 qMRL4 4 Midrib length QTL analysis CRF3 F2:3 ACMP00859 BrapaV3.0 A10 3876128 3876405 cnu_m492a A03 24900138 24900400 86.9 8.29 10.1093/dnares/dss029 t3711.M002149.1 t3711.M003582.1 t3711.T000182 qMRL5 4 Midrib length QTL analysis CRF3 F2:3 ACMP00854 BrapaV3.0 A04 21024657 21024877 mBRPGM0882a NA 0 0 81 2.98 10.1093/dnares/dss029 t3711.M002144.1 NA t3711.T000183 qMRL6 4 Midrib length QTL analysis CRF3 F2:3 nia_m078a BrapaV3.0 A06 8804211 8804551 ACMP00276 A06 11113040 11113556 4.3 5.22 10.1093/dnares/dss029 t3711.M001163.1 t3711.M001684.1 t3711.T000184 qMRL7 4 Midrib length QTL analysis CRF3 F2:3 ACMP00494 BrapaV3.0 A06 23280424 23280767 ACMP00736 A06 23734074 23734286 36 3.29 10.1093/dnares/dss029 t3711.M001863.1 t3711.M002053.1 t3711.T000185 qMRL8 4 Midrib length QTL analysis CRF3 F2:3 cnu_m553a BrapaV3.0 A07 24494309 24494605 cnu_m310a A07 26732906 26733155 82 3.33 10.1093/dnares/dss029 t3711.M001113.1 t3711.M001060.1 t3711.T000186 qMRL9 4 Midrib length QTL analysis CRF3 F2:3 ACMP00682 BrapaV3.0 A05 10239374 10239712 At4g15510 NA 0 0 12.9 3.48 10.1093/dnares/dss029 t3711.M002009.1 NA t3711.T000187 qMRW1 4 Midrib width QTL analysis CRF3 F2:3 At4g35530a NA NA 0 0 nia_m110a A01 103490 103742 0.5 3.33 10.1093/dnares/dss029 NA t3711.M001181.1 t3711.T000188 qMRW1 4 Midrib width QTL analysis CRF3 F2:3 cnu_m310a BrapaV3.0 A07 26732906 26733155 cnu_ cnu_m308a NA 0 0 94.7 5.62 10.1093/dnares/dss029 t3711.M001060.1 NA t3711.T000189 qMRW1 4 Midrib width QTL analysis CRF3 F2:3 ACMP00598 BrapaV3.0 A10 15798743 15799010 At5g06240a NA 0 0 54.7 4.06 10.1093/dnares/dss029 t3711.M001942.1 NA t3711.T000190 qMRW2 4 Midrib width QTL analysis CRF3 F2:3 cnu_m616a BrapaV3.0 A02 721260 721528 At5g12290 NA 0 0 0 4.1 10.1093/dnares/dss029 t3711.M001125.1 NA t3711.T000191 qMRW3 4 Midrib width QTL analysis CRF3 F2:3 ACMP00323 BrapaV3.0 A03 20078985 20079437 cnu_m526a A03 24500287 24500568 109 2.74 10.1093/dnares/dss029 t3711.M001736.1 t3711.M003962.1 t3711.T000192 qMRW4 4 Midrib width QTL analysis CRF3 F2:3 ACMP00323 BrapaV3.0 A03 20078985 20079437 cnu_m526a A03 24500287 24500568 109 2.61 10.1093/dnares/dss029 t3711.M001736.1 t3711.M003962.1 t3711.T000193 qMRW5 4 Midrib width QTL analysis CRF3 F2:3 cnu_m310a BrapaV3.0 A07 26732906 26733155 cnu_ cnu_m308a NA 0 0 94.7 3.37 10.1093/dnares/dss029 t3711.M001060.1 NA t3711.T000194 qPH1 4 Plant height QTL analysis CRF3 F2:3 cnu_m616a BrapaV3.0 A02 721260 721528 At5g12290 NA 0 0 0.5 5.06 10.1093/dnares/dss029 t3711.M001125.1 NA t3711.T000195 qPH1 4 Plant height QTL analysis CRF3 F2:3 cnu_m356a BrapaV3.0 A09 39588301 39588538 At2g20490 NA 0 0 138.2 3.43 10.1093/dnares/dss029 t3711.M001071.1 NA t3711.T000196 qPH1 4 Plant height QTL analysis CRF3 F2:3 ACMP00858 BrapaV3.0 A10 13908113 13908504 nia_m015a A10 2693583 2693864 11.9 3.97 10.1093/dnares/dss029 t3711.M002148.1 t3711.M001133.1 t3711.T000197 qPH2 4 Plant height QTL analysis CRF3 F2:3 cnu_m616a BrapaV3.0 A02 721260 721528 At5g12290 NA 0 0 0.5 10.41 10.1093/dnares/dss029 t3711.M001125.1 NA t3711.T000198 qPH3 4 Plant height QTL analysis CRF3 F2:3 ACMP00100 BrapaV3.0 A03 12161 12471 ACMP00396 A03 1432470 1432641 7.3 2.67 10.1093/dnares/dss029 t3711.M001548.1 t3711.M001790.1 t3711.T000199 qPH4 4 Plant height QTL analysis CRF3 F2:3 cnu_m288a BrapaV3.0 A03 9986707 9986860 ACMP00087 A03 11048575 11048726 40.8 3.36 10.1093/dnares/dss029 t3711.M001053.1 t3711.M001536.1 t3711.T000200 qPH5 4 Plant height QTL analysis CRF3 F2:3 ACMP00868 BrapaV3.0 A05 4854267 4854460 cnu_m029a A05 13357412 13357609 67.3 6.57 10.1093/dnares/dss029 t3711.M002158.1 t3711.M001007.1 t3711.T000201 qPH6 4 Plant height QTL analysis CRF3 F2:3 cnu_m056a BrapaV3.0 A07 26030383 26030580 cnu_m308a A07 28362375 28362599 92.6 2.99 10.1093/dnares/dss029 t3711.M003681.1 t3711.M001059.1 t3711.T000202 qPH7 4 Plant height QTL analysis CRF3 F2:3 cnu_m056a BrapaV3.0 A07 26030383 26030580 cnu_m308a A07 28362375 28362599 92.6 8.21 10.1093/dnares/dss029 t3711.M003681.1 t3711.M001059.1 t3711.T000203 qPL1 4 Petiole length QTL analysis CRF3 F2:3 cnu_m036a BrapaV3.0 A02 9645085 9645249 SNP NA 0 0 19 5.28 10.1093/dnares/dss029 t3711.M003670.1 NA t3711.T000204 qPL2 4 Petiole length QTL analysis CRF3 F2:3 SNP-CKX3a BrapaV3.0 A02 6286170 6286372 ACMP00696 NA 0 0 39.5 3 10.1093/dnares/dss029 t3711.M002408.1 t3711.M002022.1 t3711.T000205 qPL3 4 Petiole length QTL analysis CRF3 F2:3 nia_m078a BrapaV3.0 A06 8804211 8804551 ACMP00132 A06 18321970 18322126 1.9 11.8 10.1093/dnares/dss029 t3711.M001163.1 t3711.M001570.1 t3711.T000206 qPL4 4 Petiole length QTL analysis CRF3 F2:3 nia_m100a BrapaV3.0 A10 17473696 17473964 cnu_mBRPGM1245a NA 0 0 70 4.48 10.1093/dnares/dss029 t3711.M001177.1 NA t3711.T000207 qSBL1 4 Siliqua beak length QTL analysis CRF3 F2:3 cnu_m288a BrapaV3.0 A03 9986707 9986860 ACMP00538 A03 14281567 14281753 39.1 10.54 10.1093/dnares/dss029 t3711.M001053.1 t3711.M001895.1 t3711.T000208 qSBL1 4 Siliqua beak length QTL analysis CRF3 F2:3 cnu_m044a BrapaV3.0 A07 22428909 22429149 cnu_m513a A07 24541771 24542018 66.8 4.55 10.1093/dnares/dss029 t3711.M001013.1 t3711.M003954.1 t3711.T000209 qSBL1 4 Siliqua beak length QTL analysis CRF3 F2:3 ACMP00703 NA NA 0 0 ACMP00681 A09 5236054 5236424 36 3 10.1093/dnares/dss029 t3711.M002029.1 t3711.M002008.1 t3711.T000210 qSBL2 4 Siliqua beak length QTL analysis CRF3 F2:3 cnu_m288a BrapaV3.0 A03 9986707 9986860 ACMP00538 A03 14281567 14281753 39.1 5.52 10.1093/dnares/dss029 t3711.M001053.1 t3711.M001895.1 t3711.T000211 qSBL3 4 Siliqua beak length QTL analysis CRF3 F2:3 At3g55440 NA NA 0 0 nia_m060a A04 3743405 3743679 15.7 3.3 10.1093/dnares/dss029 NA t3711.M001156.1 t3711.T000212 qSBL4 4 Siliqua beak length QTL analysis CRF3 F2:3 cnu_mBRPGM1249a NA NA 0 0 ACMP00841 A05 12619463 12619633 83.7 3.2 10.1093/dnares/dss029 NA t3711.M002134.1 t3711.T000213 qSBL5 4 Siliqua beak length QTL analysis CRF3 F2:3 cnu_mBRPGM1249a NA NA 0 0 ACMP00841 A05 12619463 12619633 83.7 3.09 10.1093/dnares/dss029 NA t3711.M002134.1 t3711.T000214 qSQL1 4 Siliqua length QTL analysis CRF3 F2:3 SNP-CKX7a BrapaV3.0 A02 4482906 4483205 At1g67060 NA 0 0 35.8 3.71 10.1093/dnares/dss029 t3711.M002407.1 NA t3711.T000215 qSQL1 4 Siliqua length QTL analysis CRF3 F2:3 cnu_m036a BrapaV3.0 A02 9645085 9645249 nia_m136a A07 25874463 25874737 57 4.52 10.1093/dnares/dss029 t3711.M003670.1 t3711.M001191.1 t3711.T000216 qSQL1 4 Siliqua length QTL analysis CRF3 F2:3 cnu_m538a BrapaV3.0 A08 17577998 17578172 cnu_m449a A08 18062538 18062833 58.6 4.6 10.1093/dnares/dss029 t3711.M003969.1 t3711.M003911.1 t3711.T000217 qSQL1 4 Siliqua length QTL analysis CRF3 F2:3 nia_m128a BrapaV3.0 A09 29448915 29449244 At4g12590 NA 0 0 84.1 3.09 10.1093/dnares/dss029 t3711.M004044.1 NA t3711.T000218 qSQL1 4 Siliqua length QTL analysis CRF3 F2:3 ACMP00144 BrapaV3.0 A10 377458 377703 nia_m144a A10 14359871 14360175 25 5.52 10.1093/dnares/dss029 t3711.M001580.1 t3711.M001193.1 t3711.T000219 qSQL2 4 Siliqua length QTL analysis CRF3 F2:3 At1g67060 NA NA 0 0 cnu_mBRPGM0182a NA 0 0 52.4 3.88 10.1093/dnares/dss029 NA NA t3711.T000220 qSQL3 4 Siliqua length QTL analysis CRF3 F2:3 ACMP00100 BrapaV3.0 A03 12161 12471 cnu_Mbrpgm1168a NA 0 0 8.4 2.95 10.1093/dnares/dss029 t3711.M001548.1 NA t3711.T000221 qSQL4 4 Siliqua length QTL analysis CRF3 F2:3 ACMP00100 BrapaV3.0 A03 12161 12471 cnu_Mbrpgm1168a NA 0 0 8.4 2.88 10.1093/dnares/dss029 t3711.M001548.1 NA t3711.T000222 qSQL5 4 Siliqua length QTL analysis CRF3 F2:3 ACMP00430 BrapaV3.0 A10 13906327 13906519 At5g50320 NA 0 0 31.1 9 10.1093/dnares/dss029 t3711.M001816.1 NA t3711.T000223 qSQL6 4 Siliqua length QTL analysis CRF3 F2:3 ACMP00451 BrapaV3.0 A03 27589567 27589727 cnu_416a NA 0 0 121 4.88 10.1093/dnares/dss029 t3711.M001833.1 NA t3711.T000224 qSQL7 4 Siliqua length QTL analysis CRF3 F2:3 ACMP00451 BrapaV3.0 A03 27589567 27589727 cnu_416a NA 0 0 121 3.24 10.1093/dnares/dss029 t3711.M001833.1 NA t3711.T000225 qSQL8 4 Siliqua length QTL analysis CRF3 F2:3 cnu_m036a BrapaV3.0 A02 9645085 9645249 nia_m136a A07 25874463 25874737 67.4 5.27 10.1093/dnares/dss029 t3711.M003670.1 t3711.M001191.1 t3711.T000226 qSQL9 4 Siliqua length QTL analysis CRF3 F2:3 cnu_m036a BrapaV3.0 A02 9645085 9645249 nia_m136a A07 25874463 25874737 57.4 5 10.1093/dnares/dss029 t3711.M003670.1 t3711.M001191.1 t3711.T000227 qSQW1 4 Siliqua width QTL analysis CRF3 F2:3 cnu_m068a BrapaV3.0 A01 20095529 20095648 ACMP00406 A01 25503110 25503275 67 5.97 10.1093/dnares/dss029 t3711.M001018.1 t3711.M001800.1 t3711.T000228 qSQW1 4 Siliqua width QTL analysis CRF3 F2:3 ACMP00859 BrapaV3.0 A10 3876128 3876405 cnu_m492a A03 24900138 24900400 95.4 3.24 10.1093/dnares/dss029 t3711.M002149.1 t3711.M003582.1 t3711.T000229 qSQW1 4 Siliqua width QTL analysis CRF3 F2:3 ACMP00682 BrapaV3.0 A05 10239374 10239712 At1g50240 NA 0 0 6.5 4.62 10.1093/dnares/dss029 t3711.M002009.1 NA t3711.T000230 qSQW1 4 Siliqua width QTL analysis CRF3 F2:3 cnu_m534a BrapaV3.0 A09 36193896 36194100 cnu_m115a A09 37304930 37305032 116.2 3.09 10.1093/dnares/dss029 t3711.M001110.1 t3711.M003724.1 t3711.T000231 qSQW2 4 Siliqua width QTL analysis CRF3 F2:3 cnu_m068a BrapaV3.0 A01 20095529 20095648 ACMP00406 A01 25503110 25503275 67 3.21 10.1093/dnares/dss029 t3711.M001018.1 t3711.M001800.1 t3711.T000232 qSQW3 4 Siliqua width QTL analysis CRF3 F2:3 cnu_mBRPGM0951a NA NA 0 0 ACMP00130 A02 23435405 23435571 65.1 3.51 10.1093/dnares/dss029 NA t3711.M001568.1 t3711.T000233 qSQW4 4 Siliqua width QTL analysis CRF3 F2:3 nia_m115a BrapaV3.0 A03 1062346 1062606 ACMP00430 A10 13906327 13906519 1.7 4.75 10.1093/dnares/dss029 t3711.M001183.1 t3711.M001816.1 t3711.T000234 qSQW5 4 Siliqua width QTL analysis CRF3 F2:3 nia_m115a BrapaV3.0 A03 1062346 1062606 ACMP00430 A10 13906327 13906519 1.7 4.39 10.1093/dnares/dss029 t3711.M001183.1 t3711.M001816.1 t3711.T000235 qSQW6 4 Siliqua width QTL analysis CRF3 F2:3 nia_m079a BrapaV3.0 A03 7728097 7728328 cnu_m213a A07 3878431 3878611 43.5 3.45 10.1093/dnares/dss029 t3711.M001164.1 t3711.M003772.1 t3711.T000236 qSQW7 4 Siliqua width QTL analysis CRF3 F2:3 ACMP00859 BrapaV3.0 A10 3876128 3876405 cnu_m492a A03 24900138 24900400 95.4 4.73 10.1093/dnares/dss029 t3711.M002149.1 t3711.M003582.1 t3711.T000237 qSSQ1 4 Seeds per siliqua QTL analysis CRF3 F2:3 SNP-GASAa NA NA 0 0 At1g67060 NA 0 0 37.8 6.42 10.1093/dnares/dss029 NA NA t3711.T000238 qSSQ1 4 Seeds per siliqua QTL analysis CRF3 F2:3 At5g59140b NA NA 0 0 ACMP00598 A10 15798743 15799010 38 3.12 10.1093/dnares/dss029 NA t3711.M001942.1 t3711.T000239 qSSQ2 4 Seeds per siliqua QTL analysis CRF3 F2:3 cnu_m288a a NA NA 0 0 cnu_m213a A07 3878431 3878611 44.6 6.12 10.1093/dnares/dss029 NA t3711.M003772.1 t3711.T000240 qSSQ3 4 Seeds per siliqua QTL analysis CRF3 F2:3 cnu_m371a BrapaV3.0 A03 23101483 23101767 cnu_m492a A03 24900138 24900400 94.7 7.58 10.1093/dnares/dss029 t3711.M001075.1 t3711.M003582.1 t3711.T000241 qSSQ4 4 Seeds per siliqua QTL analysis CRF3 F2:3 At5g59140b NA NA 0 0 ACMP00598 A10 15798743 15799010 38 5.91 10.1093/dnares/dss029 NA t3711.M001942.1 t3711.T000242 qSW1 4 Seed weight QTL analysis CRF3 F2:3 cnu_m616a BrapaV3.0 A02 721260 721528 cnu_m036a A02 9645085 9645249 0 3.15 10.1093/dnares/dss029 t3711.M001125.1 t3711.M003670.1 t3711.T000243 qSW1 4 Seed weight QTL analysis CRF3 F2:3 At5g09310 NA NA 0 0 ACMP00249 A03 699566 699921 78.1 3.5 10.1093/dnares/dss029 NA t3711.M001664.1 t3711.T000244 qSW2 4 Seed weight QTL analysis CRF3 F2:3 cnu_m616a BrapaV3.0 A02 721260 721528 cnu_m036a A02 9645085 9645249 0 6.05 10.1093/dnares/dss029 t3711.M001125.1 t3711.M003670.1 t3711.T000245 qSW3 4 Seed weight QTL analysis CRF3 F2:3 cnu_m288a BrapaV3.0 A03 9986707 9986860 ACMP00538 A03 14281567 14281753 39.1 4.8 10.1093/dnares/dss029 t3711.M001053.1 t3711.M001895.1 t3711.T000246 qSW4 4 Seed weight QTL analysis CRF3 F2:3 ACMP00132 BrapaV3.0 A06 18321970 18322126 ACMP00736 A06 23734074 23734286 28.3 3.83 10.1093/dnares/dss029 t3711.M001570.1 t3711.M002053.1 t3711.T000247 CTF2-Sw1 4 Silique width QTL analysis CTF2 F2 cnu_m462a BrapaV3.0 A01 21668242 21668508 NA 0 0 47.5 3.38 10.1007/s00122-014-2382-z t3711.M003920.1 NA t3711.T000248 CTF2-Sw3 4 Silique width QTL analysis CTF2 F2 BrGMS480 NA NA 0 0 NA 0 0 14.2 4.24 10.1007/s00122-014-2382-z NA NA t3711.T000249 CTF2-Sw4 4 Silique width QTL analysis CTF2 F2 tet-o NA NA 0 0 NA 0 0 35.3 7.52 10.1007/s00122-014-2382-z NA NA t3711.T000250 CTF6-Sw4 4 Silique width QTL analysis CTF6 RIL,F6 tet-o NA NA 0 0 NA 0 0 36 10.25 10.1007/s00122-014-2382-z NA NA t3711.T000251 CTF6-Sw8 4 Silique width QTL analysis CTF6 RIL,F6 cnu_m239a BrapaV3.0 A08 15401056 15401249 NA 0 0 45.8 3.17 10.1007/s00122-014-2382-z t3711.M003792.1 NA t3711.T000252 CTF7-Sw4 4 Silique width QTL analysis CTF7 RIL,F7 tet-o NA NA 0 0 NA 0 0 34.1 4.11 10.1007/s00122-014-2382-z NA NA t3711.T000253 CTF7-Sw8 4 Silique width QTL analysis CTF7 RIL,F7 cnu_m518a BrapaV3.0 A08 15532077 15532319 NA 0 0 20.5 4.2 10.1007/s00122-014-2382-z t3711.M003957.1 NA t3711.T000254 CYF2-Sw2 4 Silique width QTL analysis CYF2 F2 At5g15470.2 NA NA 0 0 NA 0 0 22.3 2.84 10.1007/s00122-014-2382-z NA NA t3711.T000255 CYF2-Sw9 4 Silique width QTL analysis CYF2 F2 BrGMS588 NA NA 0 0 NA 0 0 43.7 5.05 10.1007/s00122-014-2382-z NA NA t3711.T000256 5 leaf phytate concentration QTL analysis DH-03 DH E34M16221.9 NA NA 0 0 NA 0 0 24.85 3.17 10.1111/j.1365-3040.2008.01791.x NA NA t3711.T000257 TuQTL-1 4 Turnip trait, Turnip formation, Turnip shoots, Turnip length (mm), Turnip width (mm), Turnip weight (g) QTL analysis DH-30, BC1 DH, BC NA NA 0 0 NA 0 0 Top 4.74-7.08 10.1093/jxb/erm255 NA NA t3711.T000258 5 leaf phosphate concentration QTL analysis DH-30 DH E34M16237.5Y NA NA 0 0 NA 0 0 27.4 4.46 10.1111/j.1365-3040.2008.01791.x NA NA t3711.T000259 5 seed phytate concentration QTL analysis DH-30 DH E34M16194.7 NA NA 0 0 NA 0 0 71.13 3.09 10.1111/j.1365-3040.2008.01791.x NA NA t3711.T000260 5 seed phosphate concentration QTL analysis DH-30 DH P23M48281.8 NA NA 0 0 NA 0 0 33.99 4.39 10.1111/j.1365-3040.2008.01791.x NA NA t3711.T000261 5 seed phytate concentration QTL analysis DH-30 DH E34M15446.7y NA NA 0 0 NA 0 0 17.32 3.95 10.1111/j.1365-3040.2008.01791.x NA NA t3711.T000262 5 leaf phytate concentration QTL analysis DH-30 DH BRMS018R07 NA NA 0 0 NA 0 0 36.31 12.6 10.1111/j.1365-3040.2008.01791.x NA NA t3711.T000263 FLQTL-1 4 Flowering time, Flowering time (days) QTL analysis DH-30 DH NA NA 0 0 NA 0 0 Middle 2.25 10.1093/jxb/erm255 NA NA t3711.T000264 FLQTL-5 4 Flowering time, Flowering time (days) QTL analysis DH-30 DH NA NA 0 0 NA 0 0 Middle 2.42 10.1093/jxb/erm255 NA NA t3711.T000265 SCQTL-1 4 Seed colour, Seed colour QTL analysis DH-38, DH-30 DH NA NA 0 0 NA 0 0 Middle 10.18-12.58 10.1093/jxb/erm255 NA NA t3711.T000266 SPQTL-3 4 Seed-related trait, Seed pod length (mm), Beak length (mm), Seed pod width (mm) QTL analysis DH-38, DH-30 DH NA NA 0 0 NA 0 0 H 4.68-6.39 10.1093/jxb/erm255 NA NA t3711.T000267 5 seed phosphate concentration QTL analysis DH-38 DH E36M15M197.9Y NA NA 0 0 NA 0 0 31.95 2.65 10.1111/j.1365-3040.2008.01791.x NA NA t3711.T000268 5 leaf phosphate concentration QTL analysis DH-38 DH E32M16496.7 NA NA 0 0 NA 0 0 39.5 2.63 10.1111/j.1365-3040.2008.01791.x NA NA t3711.T000269 5 seed phytate concentration QTL analysis DH-38 DH P23M47254.2 NA NA 0 0 NA 0 0 86.2 4.03 10.1111/j.1365-3040.2008.01791.x NA NA t3711.T000270 5 leaf phytate concentration QTL analysis DH-38 DH E32M16409.0 NA NA 0 0 NA 0 0 26.32 12.7 10.1111/j.1365-3040.2008.01791.x NA NA t3711.T000271 5 leaf phosphate concentration QTL analysis DH-38 DH E44M20190.4 NA NA 0 0 NA 0 0 46.63 3.09 10.1111/j.1365-3040.2008.01791.x NA NA t3711.T000272 FLQTL-3 4 Flowering time, Flowering time (days) QTL analysis DH-38 DH NA NA 0 0 NA 0 0 Bottom 2 10.1093/jxb/erm255 NA NA t3711.T000273 FLQTL-7 4 Flowering time, Flowering time (days) QTL analysis DH-38 DH NA NA 0 0 NA 0 0 Top 2.7 10.1093/jxb/erm255 NA NA t3711.T000274 LQTL-10 4 Leaf trait, Lamina width (cm), Leaf area (cm2), Lamina length (cm) QTL analysis DH-38 DH NA NA 0 0 NA 0 0 H 2.00-2.53 10.1093/jxb/erm255 NA NA t3711.T000275 LQTL-8 4 Leaf trait, Leaf area (cm2) QTL analysis DH-38 DH NA NA 0 0 NA 0 0 H 2.15 10.1093/jxb/erm255 NA NA t3711.T000276 SPQTL-1 4 Seed pod length, Seed pod length (mm) QTL analysis DH-38 DH NA NA 0 0 NA 0 0 Middle 2.7 10.1093/jxb/erm255 NA NA t3711.T000277 SPQTL-2 4 Seed-related trait, Beak length (mm) QTL analysis DH-38 DH NA NA 0 0 NA 0 0 Top 3.87 10.1093/jxb/erm255 NA NA t3711.T000278 SPQTL-4 4 Seed-related trait, Beak length (mm) QTL analysis DH-38 DH NA NA 0 0 NA 0 0 H 3.08 10.1093/jxb/erm255 NA NA t3711.T000279 5 seed phosphate concentration QTL analysis DH-CC DH E36M31-7 NA NA 0 0 NA 0 0 46.71 3 10.1111/j.1365-3040.2008.01791.x NA NA t3711.T000280 5 seed phosphate concentration QTL analysis DH-CC DH E33M56-2 NA NA 0 0 NA 0 0 83.78 2.47 10.1111/j.1365-3040.2008.01791.x NA NA t3711.T000281 5 seed phytate concentration QTL analysis DH-CC DH e38m50-6 NA NA 0 0 NA 0 0 77.75 4.16 10.1111/j.1365-3040.2008.01791.x NA NA t3711.T000282 4 Late bolting, bolting time QTL analysis DH27 x G309 F2 BN007-1 NA NA 0 0 WA31a NA 0 0 24.3 10.1023/A:1004023532005 NA NA t3711.T000283 Ali-QTL10.1 5 Glucosinolate accumulation, Total aliphatic glucosinolates (The sum of PRO, NAP and GBN) QTL analysis DH30 DH NA NA 0 0 NA 0 0 88.9 2.9 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000284 Ali-QTL10.1 5 Glucosinolate accumulation, Aliphatic glucosinolates, Gluconapin (3-butenyl glucosinolate, 4-C) QTL analysis DH30 DH E44M20239.3 NA NA 0 0 NA 0 0 84.3 2.2 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000285 Ali-QTL3.1 5 Glucosinolate accumulation, Aliphatic glucosinolates, (PRO+NAP)/Tali (Ratio for side-chain elongation) QTL analysis DH30 DH NA NA 0 0 NA 0 0 105.6 8.8 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000286 Ali-QTL3.2 5 Glucosinolate accumulation, Total aliphatic glucosinolates (The sum of PRO, NAP and GBN) QTL analysis DH30 DH NA NA 0 0 NA 0 0 102.8 7.3 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000287 Ali-QTL3.2 5 Glucosinolate accumulation, Aliphatic glucosinolates, Glucobrassicanapin (4-pentenyl glucosinolate, 5-C) QTL analysis DH30 DH NA NA 0 0 NA 0 0 65.4 1.4 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000288 Ali-QTL3.2 5 Glucosinolate accumulation, Total aliphatic glucosinolates (The sum of PRO, NAP and GBN) QTL analysis DH30 DH E46M16213.7 NA NA 0 0 NA 0 0 18.7 1.9 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000289 Ali-QTL4.1 5 Glucosinolate accumulation, Aliphatic glucosinolates, Progoitrin (2-hydroxy-3-butenyl glucosinolate, 4 C) QTL analysis DH30 DH E44M20137.7 NA NA 0 0 NA 0 0 30.9 2.7 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000290 Ali-QTL5.1 5 Glucosinolate accumulation, Aliphatic glucosinolates, Gluconapin (3-butenyl glucosinolate, 4-C) QTL analysis DH30 DH NA NA 0 0 NA 0 0 102.8 8.3 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000291 Ali-QTL7.1 5 Glucosinolate accumulation, Aliphatic glucosinolates, Gluconapin (3-butenyl glucosinolate, 4-C) QTL analysis DH30 DH NA NA 0 0 NA 0 0 37.7 2.6 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000292 Ali-QTL8.1 5 Glucosinolate accumulation, Aliphatic glucosinolates, Progoitrin (2-hydroxy-3-butenyl glucosinolate, 4 C) QTL analysis DH30 DH P23M48277.4 NA NA 0 0 NA 0 0 54.3 3.7 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000293 Ali-QTL9.2 5 Glucosinolate accumulation, Aliphatic glucosinolates, Glucobrassicanapin (4-pentenyl glucosinolate, 5-C) QTL analysis DH30 DH E44M20235.8 NA NA 0 0 NA 0 0 94 2.5 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000294 Ali-QTL9.3 5 Glucosinolate accumulation, Aliphatic glucosinolates, Gluconapin (3-butenyl glucosinolate, 4-C) QTL analysis DH30 DH NA NA 0 0 NA 0 0 80.2 1.6 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000295 Aro-QTL4.1 5 Glucosinolate accumulation, Total aliphatic glucosinolates (The sum of PRO, NAP and GBN) QTL analysis DH30 DH NA NA 0 0 NA 0 0 107 1.4 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000296 Aro-QTL4.2 5 Glucosinolate accumulation, Total aromatic glucosinolates QTL analysis DH30 DH NA NA 0 0 NA 0 0 33.9 2.8 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000297 Aro-QTL7.1 5 Glucosinolate accumulation, Total aromatic glucosinolates QTL analysis DH30 DH NA NA 0 0 NA 0 0 7 3.1 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000298 Ind-QTL3.2 5 Glucosinolate accumulation, Total indolic glucosinolates QTL analysis DH30 DH E46M16294.0 NA NA 0 0 NA 0 0 106.6 2 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000299 Ali-QTL1.1 5 Glucosinolate accumulation, Aliphatic glucosinolates, Progoitrin (2-hydroxy-3-butenyl glucosinolate, 4 C) QTL analysis DH38 DH E32M19316.6 NA NA 0 0 NA 0 0 1.1 3.4 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000300 Ali-QTL1.1 5 Glucosinolate accumulation, Aliphatic glucosinolates, Progoitrin (2-hydroxy-3-butenyl glucosinolate, 4 C) QTL analysis DH38 DH NA NA 0 0 NA 0 0 30.6 9.2 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000301 Ali-QTL1.2 5 Glucosinolate accumulation, Aliphatic glucosinolates, Gluconapin (3-butenyl glucosinolate, 4-C) QTL analysis DH38 DH E36M15M208.7y NA NA 0 0 NA 0 0 14.9 8 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000302 Ali-QTL1.2 5 Glucosinolate accumulation, Aliphatic glucosinolates, Gluconapin (3-butenyl glucosinolate, 4-C) QTL analysis DH38 DH E39M22218.4 NA NA 0 0 NA 0 0 44.1 3 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000303 Ali-QTL1.2 5 Glucosinolate accumulation, Aliphatic glucosinolates, Gluconapin (3-butenyl glucosinolate, 4-C) QTL analysis DH38 DH P23M47140.6 NA NA 0 0 NA 0 0 33.9 2.6 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000304 Ali-QTL1.2 5 Glucosinolate accumulation, Total aliphatic glucosinolates (The sum of PRO, NAP and GBN) QTL analysis DH38 DH E32M19313.2 NA NA 0 0 NA 0 0 29.7 2.5 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000305 Ali-QTL1.3 5 Glucosinolate accumulation, Aliphatic glucosinolates, PRO/(PRO+NAP) (Ratio for side-chain modification) QTL analysis DH38 DH NA NA 0 0 NA 0 0 30.8 2.8 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000306 Ali-QTL1.3 5 Glucosinolate accumulation, Aliphatic glucosinolates, PRO/(PRO+NAP) (Ratio for side-chain modification) QTL analysis DH38 DH E36M15M463.8 NA NA 0 0 NA 0 0 46.4 2.9 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000307 Ali-QTL1.3 5 Glucosinolate accumulation, Aliphatic glucosinolates, PRO/(PRO+NAP) (Ratio for side-chain modification) QTL analysis DH38 DH E44M20135.3 NA NA 0 0 NA 0 0 65.2 2.6 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000308 Ali-QTL10.1 5 Glucosinolate accumulation, Aliphatic glucosinolates, Progoitrin (2-hydroxy-3-butenyl glucosinolate, 4 C) QTL analysis DH38 DH E34M16M105.9y NA NA 0 0 NA 0 0 7.1 2.4 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000309 Ali-QTL10.1 5 Glucosinolate accumulation, Aliphatic glucosinolates, Gluconapin (3-butenyl glucosinolate, 4-C) QTL analysis DH38 DH E32M16157.8 NA NA 0 0 NA 0 0 57.3 5.2 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000310 Ali-QTL10.1 5 Glucosinolate accumulation, Total aliphatic glucosinolates (The sum of PRO, NAP and GBN) QTL analysis DH38 DH NA NA 0 0 NA 0 0 48.1 2.4 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000311 Ali-QTL10.2 5 Glucosinolate accumulation, Aliphatic glucosinolates, (PRO+NAP)/Tali (Ratio for side-chain elongation) QTL analysis DH38 DH NA NA 0 0 NA 0 0 60.9 16.4 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000312 Ali-QTL3.1 5 Glucosinolate accumulation, Aliphatic glucosinolates, Gluconapin (3-butenyl glucosinolate, 4-C) QTL analysis DH38 DH NA NA 0 0 NA 0 0 13.1 1 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000313 Ali-QTL3.1 5 Glucosinolate accumulation, Aliphatic glucosinolates, Progoitrin (2-hydroxy-3-butenyl glucosinolate, 4 C) QTL analysis DH38 DH NA NA 0 0 NA 0 0 11.4 5.5 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000314 Ali-QTL3.1 5 Glucosinolate accumulation, Aliphatic glucosinolates, (PRO+NAP)/Tali (Ratio for side-chain elongation) QTL analysis DH38 DH BRMS051R09 NA NA 0 0 NA 0 0 73.1 2 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000315 Ali-QTL3.1 5 Glucosinolate accumulation, Aliphatic glucosinolates, (PRO+NAP)/Tali (Ratio for side-chain elongation) QTL analysis DH38 DH NA NA 0 0 NA 0 0 62.1 2.9 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000316 Ali-QTL3.2 5 Glucosinolate accumulation, Aliphatic glucosinolates, PRO/(PRO+NAP) (Ratio for side-chain modification) QTL analysis DH38 DH BRMS043 NA NA 0 0 NA 0 0 19.4 9 10.1111/j.1469-8137.2008.02530.x t3711.M004105.1 NA t3711.T000317 Ali-QTL3.2 5 Glucosinolate accumulation, Aliphatic glucosinolates, Glucobrassicanapin (4-pentenyl glucosinolate, 5-C) QTL analysis DH38 DH P23M48200.4Y NA NA 0 0 NA 0 0 47 3.2 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000318 Ali-QTL5.2 5 Glucosinolate accumulation, Aliphatic glucosinolates, PRO/(PRO+NAP) (Ratio for side-chain modification) QTL analysis DH38 DH BRMS042 BrapaV3.0 A03 22633782 22633916 NA 0 0 62.8 4.4 10.1111/j.1469-8137.2008.02530.x t3711.M004108.1 NA t3711.T000319 Ali-QTL6.1 5 Glucosinolate accumulation, Total aliphatic glucosinolates (The sum of PRO, NAP and GBN) QTL analysis DH38 DH E34M15384.1 NA NA 0 0 NA 0 0 60.5 1.8 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000320 Ali-QTL7.1 5 Glucosinolate accumulation, Aliphatic glucosinolates, Gluconapin (3-butenyl glucosinolate, 4-C) QTL analysis DH38 DH E34M15384.1 NA NA 0 0 NA 0 0 60.5 4.1 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000321 Ali-QTL7.1 5 Glucosinolate accumulation, Total aliphatic glucosinolates (The sum of PRO, NAP and GBN) QTL analysis DH38 DH E32M16157.8 NA NA 0 0 NA 0 0 57.3 4 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000322 Ali-QTL9.1 5 Glucosinolate accumulation, Aliphatic glucosinolates, Gluconapin (3-butenyl glucosinolate, 4-C) QTL analysis DH38 DH E34M15384.1 NA NA 0 0 NA 0 0 60.5 11.4 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000323 Ali-QTL9.2 5 Glucosinolate accumulation, Aliphatic glucosinolates, Glucobrassicanapin (4-pentenyl glucosinolate, 5-C) QTL analysis DH38 DH E44M20183.7 NA NA 0 0 NA 0 0 61.9 1.1 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000324 Ali-QTL9.3 5 Glucosinolate accumulation, Aliphatic glucosinolates, (PRO+NAP)/Tali (Ratio for side-chain elongation) QTL analysis DH38 DH NA NA 0 0 NA 0 0 63.3 8.8 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000325 Aro-QTL4.1 5 Glucosinolate accumulation, Total aromatic glucosinolates QTL analysis DH38 DH NA NA 0 0 NA 0 0 3 2.1 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000326 FLQTL-1 4 Flowering time QTL analysis DH38 DH NA NA 0 0 NA 0 0 34.8 11.6 10.1093/jxb/erq048 NA NA t3711.T000327 FLQTL-2 4 Flowering time, flowering time after 18 d varnalization QTL analysis DH38 DH NA NA 0 0 NA 0 0 34.8 5.6 10.1093/jxb/erq048 NA NA t3711.T000328 FLQTL-3 4 Flowering time, flowering time after 18 d varnalization QTL analysis DH38 DH NA NA 0 0 NA 0 0 60.1 3 10.1093/jxb/erq048 NA NA t3711.T000329 IND-QTL2.1 5 Glucosinolate accumulation, Total indolic glucosinolates QTL analysis DH38 DH E34M16M122.2Y NA NA 0 0 NA 0 0 46.3 2.6 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000330 IND-QTL2.1 5 Glucosinolate accumulation, Total indolic glucosinolates QTL analysis DH38 DH NA NA 0 0 NA 0 0 61.9 3.2 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000331 IND-QTL8.1 5 Glucosinolate accumulation, Total indolic glucosinolates QTL analysis DH38 DH E32M52317.7y NA NA 0 0 NA 0 0 47.9 1.1 10.1111/j.1469-8137.2008.02530.x NA NA t3711.T000332 VRQTL-1 4 Vernalization response, vernalization response: the difference in days to flowering between this experiment (FL07sp-v18) and the experiment of spring 2005 (FL05sp) under non-vernalized conditions QTL analysis DH38 DH NA NA 0 0 NA 0 0 34.8 10.8 10.1093/jxb/erq048 NA NA t3711.T000333 VRQTL-2 4 Vernalization response, vernalization response: the difference in days to flowering between this experiment (FL07sp-v31) and the experiment of spring 2005 (FL05sp) under non-vernalized conditions QTL analysis DH38 DH NA NA 0 0 NA 0 0 34.8 13.2 10.1093/jxb/erq048 NA NA t3711.T000334 copQTL1 6 Leaf width QTL analysis DH68 DH NA NA 0 0 NA 0 0 83.6 10.1104/pp.113.227348 NA NA t3711.T000335 copQTL10 4 Leaf morphological trait, Lamina length, Leaf area QTL analysis DH68 DH NA NA 0 0 NA 0 0 82.6 10.1104/pp.113.227348 NA NA t3711.T000336 copQTL11 4 Leaf morphological trait, Lamina length, Blade length QTL analysis DH68 DH NA NA 0 0 NA 0 0 141 10.1104/pp.113.227348 NA NA t3711.T000337 copQTL12 6 Leaf morphological trait, Leaf number, Lamina length, Leaf width, Blade length QTL analysis DH68 DH NA NA 0 0 NA 0 0 9.2 10.1104/pp.113.227348 NA NA t3711.T000338 copQTL13 6 Leaf morphological trait, flowering time, Leaf number, Leaf width, Flowering time QTL analysis DH68 DH NA NA 0 0 NA 0 0 22.4 10.1104/pp.113.227348 NA NA t3711.T000339 copQTL14 6 Leaf morphological trait, Lamina length, Leaf width, Blade length, Leaf index QTL analysis DH68 DH NA NA 0 0 NA 0 0 55.2 10.1104/pp.113.227348 NA NA t3711.T000340 copQTL15 6 Leaf morphological trait, plant architecture, Leaf small lobes, Plant mature height, Leaf width, Leaf index QTL analysis DH68 DH NA NA 0 0 NA 0 0 114.2 10.1104/pp.113.227348 NA NA t3711.T000341 copQTL16 6 Leaf morphological trait, Leaf width, Leaf perimeter QTL analysis DH68 DH NA NA 0 0 NA 0 0 58.5 10.1104/pp.113.227348 NA NA t3711.T000342 copQTL17 4 Leaf morphological trait, Blade length, Leaf index QTL analysis DH68 DH NA NA 0 0 NA 0 0 117.8 10.1104/pp.113.227348 NA NA t3711.T000343 copQTL18 4 Leaf color QTL analysis DH68 DH NA NA 0 0 NA 0 0 158 10.1104/pp.113.227348 NA NA t3711.T000344 copQTL19 4 plant architecture, Leaf number, Plant mature height, Plant branches QTL analysis DH68 DH NA NA 0 0 NA 0 0 41.3 10.1104/pp.113.227348 NA NA t3711.T000345 copQTL2 4 Leaf morphological trait, plant architecture, Lamina length, Petiole length, Leaf index, Plant mature height QTL analysis DH68 DH NA NA 0 0 NA 0 0 89.4 10.1104/pp.113.227348 NA NA t3711.T000346 copQTL20 4 Leaf morphological trait, Blade length, Leaf index QTL analysis DH68 DH NA NA 0 0 NA 0 0 61.6 10.1104/pp.113.227348 NA NA t3711.T000347 copQTL21 6 Leaf morphological trait, Leaf width, Blade length, Leaf index QTL analysis DH68 DH NA NA 0 0 NA 0 0 70.1 10.1104/pp.113.227348 NA NA t3711.T000348 copQTL22 4 Leaf morphological trait, Leaf color, Leaf lobes QTL analysis DH68 DH NA NA 0 0 NA 0 0 121.8 10.1104/pp.113.227348 NA NA t3711.T000349 copQTL23 6 Leaf morphological traits, plant architecture, and flowering time, Petiole length, Leaf index, Leaf color, Lamina length, Leaf width, Blade length, Plant branches, Flowering time QTL analysis DH68 DH NA NA 0 0 NA 0 0 73.9 10.1104/pp.113.227348 NA NA t3711.T000350 copQTL24 4 Leaf morphological trait, Leaf index QTL analysis DH68 DH NA NA 0 0 NA 0 0 84.9 10.1104/pp.113.227348 NA NA t3711.T000351 copQTL25 4 Leaf morphological trait, Leaf index QTL analysis DH68 DH NA NA 0 0 NA 0 0 96.9 10.1104/pp.113.227348 NA NA t3711.T000352 copQTL3 4 Leaf morphological trait, Leaf index QTL analysis DH68 DH NA NA 0 0 NA 0 0 97.4 10.1104/pp.113.227348 NA NA t3711.T000353 copQTL4 6 Leaf morphological trait, Lamina length, Leaf width, Blade length QTL analysis DH68 DH NA NA 0 0 NA 0 0 122.7 10.1104/pp.113.227348 NA NA t3711.T000354 copQTL5 4 Leaf morphological trait, Leaf index QTL analysis DH68 DH NA NA 0 0 NA 0 0 9 10.1104/pp.113.227348 NA NA t3711.T000355 copQTL6 6 Leaf morphological trait, plant architecture, flowering time, Leaf number, Flowering time, Plant branches, Lamina length, Leaf width, Blade length, Leaf index QTL analysis DH68 DH NA NA 0 0 NA 0 0 24.1 10.1104/pp.113.227348 NA NA t3711.T000356 copQTL7 6 Leaf morphological trait, Lamina length, Leaf width, Blade length QTL analysis DH68 DH NA NA 0 0 NA 0 0 28.8 10.1104/pp.113.227348 NA NA t3711.T000357 copQTL8 6 Leaf morphological trait, Lamina length, Leaf width QTL analysis DH68 DH NA NA 0 0 NA 0 0 35 10.1104/pp.113.227348 NA NA t3711.T000358 copQTL9 4 Leaf morphological trait, Leaf big lobes, Leaf wings QTL analysis DH68 DH NA NA 0 0 NA 0 0 48.2 10.1104/pp.113.227348 NA NA t3711.T000359 5 seed phytate concentration QTL analysis F2/3 (RC-CC F2/3) F2:3 Ra2G09R01 NA NA 0 0 NA 0 0 24.15 3.21 10.1111/j.1365-3040.2008.01791.x NA NA t3711.T000360 5 leaf phosphate concentration QTL analysis F2/3 (RC-CC F2/3) F2:3 E31M60-3 NA NA 0 0 NA 0 0 69.54 3.32 10.1111/j.1365-3040.2008.01791.x NA NA t3711.T000361 5 seed phosphate concentration QTL analysis F2/3 (RC-CC F2/3) F2:3 E44M47-2CC NA NA 0 0 NA 0 0 48.41 5.07 10.1111/j.1365-3040.2008.01791.x NA NA t3711.T000362 LQTL-5 4 Leaf trait, Leaf lobes, Lamina width (cm), Lamina length (cm), Leaf index QTL analysis F2/3, DH-38, DH-30 F2/3, DH NA NA 0 0 NA 0 0 Middle 2.12-6.07 10.1093/jxb/erm255 NA NA t3711.T000363 4 Flowering time QTL analysis FTBr F2 pN102E1 NA NA 0 0 pR29E1 NA 0 0 5 10.1139/g01-082 NA NA t3711.T000364 4 Flowering time QTL analysis FTBr F2 pO7E2, pFLCV2 NA NA 0 0 pN105E2 NA 0 0 5.7 10.1139/g01-082 NA NA t3711.T000365 BrSIO1 2 CO2-sensitive self-incompatibility QTL analysis HA-11621 x HA-11623 F2 XT05-004 NA NA 0 0 NA 0 0 83.5 5.17 10.1093/jxb/ert438 NA NA t3711.T000366 BrSIO2 2 CO2-sensitive self-incompatibility QTL analysis HA-11621 x HA-11623 F2 BRMS-042-2 NA NA 0 0 NA 0 0 60.87 4.46 10.1093/jxb/ert438 NA NA t3711.T000367 BrSIO3 2 CO2-sensitive self-incompatibility QTL analysis HA-11621 x HA-11623 F2 KBrH110I17R NA NA 0 0 NA 0 0 41.25 3.76 10.1093/jxb/ert438 NA NA t3711.T000368 4 circadian period of the cotyledon movement rhythm, PER QTL analysis IRRI RIL fito433 NA NA 0 0 pW108aE NA 0 0 35 2.4 10.1007/s00122-011-1592-x NA NA t3711.T000369 4 Planting to first mature flower, PtoF QTL analysis IRRI RIL BRMS008 NA NA 0 0 FLC2aE NA 0 0 31 3.2 10.1007/s00122-011-1592-x NA NA t3711.T000370 4 Planting to first mature flower, PtoF QTL analysis IRRI RIL pX144bE NA NA 0 0 fito071d NA 0 0 48 3 10.1007/s00122-011-1592-x NA NA t3711.T000371 4 circadian period of the cotyledon movement rhythm, PER QTL analysis IRRI RIL pW247aH NA NA 0 0 pX149cX NA 0 0 55 2 10.1007/s00122-011-1592-x NA NA t3711.T000372 4 Bolting to flowering, BtoF QTL analysis IRRI RIL pW134aH NA NA 0 0 fito036 A07 23341428 23341625 97 5.2 10.1007/s00122-011-1592-x NA t3711.M004149.1 t3711.T000373 4 circadian period of the cotyledon movement rhythm, PER QTL analysis IRRI RIL pW177aE NA NA 0 0 BRMS006 NA 0 0 58 2.2 10.1007/s00122-011-1592-x NA NA t3711.T000374 4 circadian period of the cotyledon movement rhythm, PER QTL analysis IRRI RIL pW130cX NA NA 0 0 BRMS016 A09 35020857 35021000 67 3.8 10.1007/s00122-011-1592-x NA t3711.M004170.1 t3711.T000375 4 Bolting to flowering, BtoF QTL analysis IRRI RIL pW120aX NA NA 0 0 pW129dH NA 0 0 28 5.2 10.1007/s00122-011-1592-x NA NA t3711.T000376 5 Olein acid content QTL analysis Jo4002 x Jo4072 F2 fad2 NA NA 0 0 NA 0 0 34 10.1023/A:1009642317634 NA NA t3711.T000377 1 Clubroot resistance, clubroot resistance (CR) against Plasmodiophora brassicae M85 QTL analysis K10 x Q5 F2 OPC11-2S BrapaV3.0 A03 16176789 16177745 NA 0 0 46.2 20.3 10.1007/s00122-008-0817-0 t3711.M000975.1 NA t3711.T000378 BrHLSI-1_2006 2 Self-incompatibility QTL analysis Ka1-22 x Ha1-400 F2 BRMS-298 NA NA 0 0 NA 0 0 7.6 10.1139/G10-001 NA NA t3711.T000379 BrHLSI-1_2007 2 Self-incompatibility QTL analysis Ka1-22 x Ha1-400 F2 BRMS-298 NA NA 0 0 NA 0 0 9.6 10.1139/G10-001 NA NA t3711.T000380 BrHLSI-2_2006 2 Self-incompatibility QTL analysis Ka1-22 x Ha1-400 F2 MLPK NA NA 0 0 NA 0 0 6.6 10.1139/G10-001 NA NA t3711.T000381 BrHLSI-2_2007 2 Self-incompatibility QTL analysis Ka1-22 x Ha1-400 F2 MLPK NA NA 0 0 NA 0 0 4.6 10.1139/G10-001 NA NA t3711.T000382 BrHLSI-3 2 Self-incompatibility QTL analysis Ka1-22 x Ha1-400 F2 UBL NA NA 0 0 NA 0 0 7.3 10.1139/G10-001 NA NA t3711.T000383 BrHLSI-4 2 Self-incompatibility QTL analysis Ka1-22 x Ha1-400 F2 BRMS-197 NA NA 0 0 NA 0 0 6.3 10.1139/G10-001 NA NA t3711.T000384 BrHLSI-5 2 Self-incompatibility QTL analysis Ka1-22 x Ha1-400 F2 BRMS-227 NA NA 0 0 NA 0 0 3.5 10.1139/G10-001 NA NA t3711.T000385 3 6 Leaf dry weight (3rd and 4th leaves), 3rd and 4th leaf dry weight QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 69.71 2.8 10.1093/jxb/ert434 NA NA t3711.T000386 4DW1 6 Leaf dry weight (3rd and 4th leaves), 3rd and 4th leaf dry weight QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 69.71 10.1093/jxb/ert434 NA NA t3711.T000387 Bl1 4 Silique beak length QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 53.6 5.7 10.3389/fpls.2012.00183 NA NA t3711.T000388 Bl2 4 Silique beak length QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 0 4.4 10.3389/fpls.2012.00183 NA NA t3711.T000389 Bl3 4 Silique beak length QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 90.1 4.1 10.3389/fpls.2012.00183 NA NA t3711.T000390 Bl4 4 Silique beak length QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 72.9 3 10.3389/fpls.2012.00183 NA NA t3711.T000391 Bn1 4 Branch number QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 64.3 5.5 10.3389/fpls.2012.00183 NA NA t3711.T000392 Bn2 4 Branch number QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 38.3 3.2 10.3389/fpls.2012.00183 NA NA t3711.T000393 Bn3 4 Branch number QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 76.7 2.8 10.3389/fpls.2012.00183 NA NA t3711.T000394 Cn1 4 Carpel number QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 84.1 4.4 10.3389/fpls.2012.00183 NA NA t3711.T000395 Cn2 4 Carpel number QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 17.5 2.5 10.3389/fpls.2012.00183 NA NA t3711.T000396 DWR3 6 Leaf dry weight ratio, 3rd and 4th leaf dry weight vs. Leaf dry weight ratio QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 40.75 18.3 10.1093/jxb/ert434 NA NA t3711.T000397 Ft1 6 Flowering time QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 34.9 5.4 10.3389/fpls.2012.00183 NA NA t3711.T000398 Ft2 6 Flowering time QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 60.8 4.9 10.3389/fpls.2012.00183 NA NA t3711.T000399 Ft3 6 Flowering time QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 85.2 4.9 10.3389/fpls.2012.00183 NA NA t3711.T000400 Ft4 6 Flowering time QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 64.3 3.7 10.3389/fpls.2012.00183 NA NA t3711.T000401 Ft5 6 Flowering time QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 106.3 3.1 10.3389/fpls.2012.00183 NA NA t3711.T000402 HDW3 6 Hypocotyl dry weight QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 3.99 6.8 10.1093/jxb/ert434 NA NA t3711.T000403 LA1 4 Leaf area QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 70.54 6 10.1093/jxb/ert434 NA NA t3711.T000404 LA1 4 Leaf area QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 24.28 3.4 10.1093/jxb/ert434 NA NA t3711.T000405 LA4 4 Leaf area QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 70.54 10.1093/jxb/ert434 NA NA t3711.T000406 LDW1 6 Leaf dry weight QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 42.66 3.5 10.1093/jxb/ert434 NA NA t3711.T000407 LFW1 4 Leaf fresh weight QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 42.66 3.2 10.1093/jxb/ert434 NA NA t3711.T000408 Lnf1 4 Leaf number until first flower QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 91.3 8.8 10.3389/fpls.2012.00183 NA NA t3711.T000409 Lnf2 4 Leaf number until first flower QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 90.1 4.9 10.3389/fpls.2012.00183 NA NA t3711.T000410 Lnf3 4 Leaf number until first flower QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 96.7 4.8 10.3389/fpls.2012.00183 NA NA t3711.T000411 Lnf4 4 Leaf number until first flower QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 64.3 3.9 10.3389/fpls.2012.00183 NA NA t3711.T000412 Lnf5 4 Leaf number until first flower QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 35.2 3.2 10.3389/fpls.2012.00183 NA NA t3711.T000413 Lnf6 4 Leaf number until first flower QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 79.6 2.9 10.3389/fpls.2012.00183 NA NA t3711.T000414 Nsps1 4 Number of seeds per silique QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 58.1 3.5 10.3389/fpls.2012.00183 NA NA t3711.T000415 Nsps2 4 Number of seeds per silique QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 82.6 2.7 10.3389/fpls.2012.00183 NA NA t3711.T000416 Ph1 6 Plant height until first flower QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 59.2 4 10.3389/fpls.2012.00183 NA NA t3711.T000417 Ph2 6 Plant height until first flower QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 81.4 3.6 10.3389/fpls.2012.00183 NA NA t3711.T000418 Ph3 6 Plant height until first flower QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 55.5 2.9 10.3389/fpls.2012.00183 NA NA t3711.T000419 R/S2 6 Root-to-shoot dry weight ratio QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 84.14 3 10.1093/jxb/ert434 NA NA t3711.T000420 RD3 4 Root diameter QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 48.53 2.6 10.1093/jxb/ert434 NA NA t3711.T000421 RL/SDW3 6 Root length-to-shoot dry weight ratio QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 125.27 2.7 10.1093/jxb/ert434 NA NA t3711.T000422 RL1 4 Root system length QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 69.71 4.1 10.1093/jxb/ert434 NA NA t3711.T000423 RL1 4 Root system length QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 21.23 3.3 10.1093/jxb/ert434 NA NA t3711.T000424 RL2 4 Root system length QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 69.71 10.1093/jxb/ert434 NA NA t3711.T000425 RV1 4 Root volume QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 69.71 3.2 10.1093/jxb/ert434 NA NA t3711.T000426 S/SR2 6 Shoot-to-plant dry weight ratio QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 69.95 3.4 10.1093/jxb/ert434 NA NA t3711.T000427 Sc1 4 Seed color QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 56.6 30.8 10.3389/fpls.2012.00183 NA NA t3711.T000428 Sc2 4 Seed color QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 52.5 12.1 10.3389/fpls.2012.00183 NA NA t3711.T000429 SDW1 6 Shoot dry weight QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 42.66 3.2 10.1093/jxb/ert434 NA NA t3711.T000430 Sg1 4 Seed germination QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 137 4.1 10.3389/fpls.2012.00183 NA NA t3711.T000431 Sg2 4 Seed germination QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 147.6 3.1 10.3389/fpls.2012.00183 NA NA t3711.T000432 Sh 5 Pod shattering QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 60 5.5 10.3389/fpls.2012.00183 NA NA t3711.T000433 Sil 4 Silique length QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 90.1 5 10.3389/fpls.2012.00183 NA NA t3711.T000434 Sin 4 Silique number QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 72.4 4 10.3389/fpls.2012.00183 NA NA t3711.T000435 SLA1 4 Specific leaf area QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 60.82 4.6 10.1093/jxb/ert434 NA NA t3711.T000436 So 5 Seed oil content QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 58.2 3 10.3389/fpls.2012.00183 NA NA t3711.T000437 St1 4 Stem thickness QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 58.9 4.7 10.3389/fpls.2012.00183 NA NA t3711.T000438 St2 4 Stem thickness QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 7.6 2.8 10.3389/fpls.2012.00183 NA NA t3711.T000439 STC1 5 Stomatal conductance QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 96.75 3 10.1093/jxb/ert434 NA NA t3711.T000440 Tln1 4 Total leaf number QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 91.3 8.3 10.3389/fpls.2012.00183 NA NA t3711.T000441 Tln2 4 Total leaf number QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 106.4 5.7 10.3389/fpls.2012.00183 NA NA t3711.T000442 Tln3 4 Total leaf number QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 58.9 4.1 10.3389/fpls.2012.00183 NA NA t3711.T000443 Tln4 4 Total leaf number QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 64.3 4.6 10.3389/fpls.2012.00183 NA NA t3711.T000444 Tln5 4 Total leaf number QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 77.8 3.3 10.3389/fpls.2012.00183 NA NA t3711.T000445 Tln6 4 Total leaf number QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 38.3 3 10.3389/fpls.2012.00183 NA NA t3711.T000446 Tph1 6 Total plant height QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 38.3 5 10.3389/fpls.2012.00183 NA NA t3711.T000447 Tph2 6 Total plant height QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 64.4 4.1 10.3389/fpls.2012.00183 NA NA t3711.T000448 Tph3 6 Total plant height QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 69.7 3.2 10.3389/fpls.2012.00183 NA NA t3711.T000449 Vi1 1 Vivipary QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 111.3 3.9 10.3389/fpls.2012.00183 NA NA t3711.T000450 Vi2 1 Vivipary QTL analysis L58 x R-o-18 RIL NA NA 0 0 NA 0 0 61.1 2.6 10.3389/fpls.2012.00183 NA NA t3711.T000451 1 Clubroot resistance QTL analysis N-WMR-3 x A9709 F3 BrSTS-54, BrSTS-61, BrSTS-33, OP NA NA 0 0 NA 0 0 36.5 27.2 10.1007/s00122-006-0412-1 NA NA t3711.T000452 ISI1 2 Interspecific incompatibility QTL analysis Osome P11 x Yellow Sarson C634 F2 KBrB086J10s BrapaV3.0 A06 4109601 4109757 BrRS2CL2148s A06 4223982 4224456 2.8 10.1007/s00122-010-1340-7 t3711.M001336.1 t3711.M001365.1 t3711.T000453 ISI2 2 Interspecific incompatibility QTL analysis Osome P11 x Yellow Sarson C634 F2 BrRS2CL2795s NA NA 0 0 BrCRY1s NA 0 0 2.7 10.1007/s00122-010-1340-7 t3711.M001402.1 t3711.M001277.1 t3711.T000454 ISI3 2 Interspecific incompatibility QTL analysis Osome P11 x Yellow Sarson C634 F2 BrPEPC3s NA NA 0 0 BrCPNs NA 0 0 2.6 10.1007/s00122-010-1340-7 t3711.M001293.1 NA t3711.T000455 ISI4 2 Interspecific incompatibility QTL analysis Osome P11 x Yellow Sarson C634 F2 KBrS003M22s BrapaV3.0 A02 27675792 27676091 KBrB086G22s A02 29571176 29571420 8.9 10.1007/s00122-010-1340-7 t3711.M000885.1 t3711.M000881.1 t3711.T000456 ISI5 2 Interspecific incompatibility QTL analysis Osome P11 x Yellow Sarson C634 F2 BrCDCp BrapaV3.0 A01 2266448 2267963 BrBCHp A03 27295719 27297365 3.8 10.1007/s00122-010-1340-7 t3711.M000925.1 t3711.M000933.1 t3711.T000457 ISI6 2 Interspecific incompatibility QTL analysis Osome P11 x Yellow Sarson C634 F2 BrACPp BrapaV3.0 A05 27268607 27269063 BRMS007m NA 0 0 3.5 10.1007/s00122-010-1340-7 t3711.M001214.1 NA t3711.T000458 ISI7 2 Interspecific incompatibility QTL analysis Osome P11 x Yellow Sarson C634 F2 BrBGER1p BrapaV3.0 A10 16377370 16378490 BrGDH2p NA 0 0 2.6 10.1007/s00122-010-1340-7 t3711.M000949.1 t3711.M000912.1 t3711.T000459 ISI8 2 Interspecific incompatibility QTL analysis Osome P11 x Yellow Sarson C634 F2 BrBTG26p NA NA 0 0 BRMS033m NA 0 0 2.5 10.1007/s00122-010-1340-7 NA NA t3711.T000460 1 White rust resistance, resistance to AC2 QTL analysis Per x R500 RIL,F6 wg2d11 NA NA 0 0 ec5a6a NA 0 0 2.5 10.1139/g01-123 NA NA t3711.T000461 1 White rust resistance, resistance to AC7 QTL analysis Per x R500 RIL,F6 wg6c1a NA NA 0 0 Pub1 NA 0 0 49.3 10.1139/g01-123 NA NA t3711.T000462 1 Freezing tolerance, acclimation ability (FTB) QTL analysis Per x R500 F2 PR2a NA NA 0 0 tg5b2a NA 0 0 2.08 10.1007/BF01248410 NA NA t3711.T000463 1 Freezing tolerance, acclimation ability (FTB) QTL analysis Per x R500 F2 ec2e5 NA NA 0 0 wg8h5 NA 0 0 4.53 10.1007/BF01248410 NA NA t3711.T000464 4 Vernalization requirement, Days to flowering QTL analysis Per x R500 F2 ec5f3 NA NA 0 0 ec5a7a NA 0 0 10.1007/BF00220941 NA NA t3711.T000465 6 Freezing tolerance, plant height (HT) QTL analysis Per x R500 F2 ec5a6b NA NA 0 0 ec5agb NA 0 0 10.13 10.1007/BF01248410 NA NA t3711.T000466 1 Freezing tolerance, nonacclimated freezing tolerance (FTN) QTL analysis Per x R500 F2 tg2d6 NA NA 0 0 ec5f11 NA 0 0 2.31 10.1007/BF01248410 NA NA t3711.T000467 FR2 6 Winter survival, Flowering time nonvernalized (days) QTL analysis Per x R500 RIL wg4a4b+5.1 NA NA 0 0 g9a2b+2.1 NA 0 0 101.8 4.27 10.1023/A:1019759512347 NA NA t3711.T000468 FTAR1 1 Winter survival, Freezing tolerance - acclimated (C) QTL analysis Per x R500 RIL wg2c4b+2.2 NA NA 0 0 COR47a+12.6 NA 0 0 19.5 2.83 10.1023/A:1019759512347 NA NA t3711.T000469 FTAR2 1 Winter survival, Freezing tolerance - acclimated (C) QTL analysis Per x R500 RIL wg1g3d+26.7 NA NA 0 0 wg1g3a+1.3 NA 0 0 33.5 2.65 10.1023/A:1019759512347 NA NA t3711.T000470 FTNR1 1 Winter survival, Freezing tolerance - nonacclimated (C) QTL analysis Per x R500 RIL wg6e9a+6.9 NA NA 0 0 wg2c4b+2.3 NA 0 0 11.3 2.66 10.1023/A:1019759512347 NA NA t3711.T000471 VFR1 6 Winter survival, Flowering time nonvernalized (days) QTL analysis Per x R500 RIL ec2f1b+0.6 NA NA 0 0 ec4c5+10.1 NA 0 0 16.3 3.02 10.1023/A:1019759512347 NA NA t3711.T000472 VFR1 6 Winter survival, Flowering time nonvernalized (days) QTL analysis Per x R500 RIL wg7f3+10.9 NA NA 0 0 wg6b10a+2.1 NA 0 0 59.6 7.32 10.1023/A:1019759512347 NA NA t3711.T000473 VFR1 6 Winter survival, Flowering time nonvernalized (days) QTL analysis Per x R500 RIL wg2c4b+3.9 NA NA 0 0 COR47a+13.1 NA 0 0 20.5 3.89 10.1023/A:1019759512347 NA NA t3711.T000474 VFR2 6 Winter survival, Flowering time nonvernalized (days) QTL analysis Per x R500 RIL pCHS3.8a+7.1 NA NA 0 0 ec5f3+1.2 NA 0 0 34.8 16.26 10.1023/A:1019759512347 NA NA t3711.T000475 VFR3 6 Winter survival, Flowering time nonvernalized (days) QTL analysis Per x R500 RIL wg3c5b+0.9 NA NA 0 0 tg5h12b+0.0 NA 0 0 5.6 4.22 10.1023/A:1019759512347 NA NA t3711.T000476 WS94R1 1 Winter survival, Winter survival 1994-95 (%) QTL analysis Per x R500 RIL vwg9a2b+12.1 NA NA 0 0 pCHS3.8c+5.2 NA 0 0 119.8 4.52 10.1023/A:1019759512347 NA NA t3711.T000477 WS94R2 1 Winter survival, Winter survival 1994-95 (%) QTL analysis Per x R500 RIL tg5e11b+1.4 NA NA 0 0 pC1b+0.1 NA 0 0 65.7 3.13 10.1023/A:1019759512347 NA NA t3711.T000478 WS94R3 1 Winter survival, Winter survival 1994-95 (%) QTL analysis Per x R500 RIL wg6f3b+1.8 NA NA 0 0 pPG11+3.6 NA 0 0 44.2 3 10.1023/A:1019759512347 NA NA t3711.T000479 WS94R4 1 Winter survival, Winter survival 1994-95 (%) QTL analysis Per x R500 RIL wg5a6+0.3 NA NA 0 0 wg7f3+1.5 NA 0 0 38.6 2.9 10.1023/A:1019759512347 NA NA t3711.T000480 WS94R5 1 Winter survival, Winter survival 1994-95 (%) QTL analysis Per x R500 RIL wg4d5+1.5 NA NA 0 0 wg1f6b+8.6 NA 0 0 37.1 2.88 10.1023/A:1019759512347 NA NA t3711.T000481 field-QTL1 4 Late bolting QTL analysis PL6 x A9709 F2 KBrH080A08 (BrFLC1) NA NA 0 0 NA 0 0 0 7.64 10.1270/jsbbs.61.151 NA NA t3711.T000482 field-QTL2 4 Late bolting QTL analysis PL6 x A9709 F2 BrFLC5 NA NA 0 0 NA 0 0 90.3 5.98 10.1270/jsbbs.61.151 NA NA t3711.T000483 pot-QTL1 4 Late bolting QTL analysis PL6 x A9709 F2 KBrB092C03 (BrFTa) NA NA 0 0 NA 0 0 51.2 6.09 10.1270/jsbbs.61.151 NA NA t3711.T000484 pot-QTL2 4 Late bolting QTL analysis PL6 x A9709 F2 KBrH068G07R NA NA 0 0 NA 0 0 0.6 5.26 10.1270/jsbbs.61.151 NA NA t3711.T000485 pot-QTL3 4 Late bolting QTL analysis PL6 x A9709 F2 KBrH072H08F NA NA 0 0 NA 0 0 22.8 4.54 10.1270/jsbbs.61.151 NA NA t3711.T000486 XccR1d-1 1 Resistance to Xanthomonas campestris pv. campestris, resistance to Xanthomonas campestris pv. campestris race 1 QTL analysis R-o-18 x B162 F2 E11M50_280b NA NA 0 0 NA 0 0 20.5 19.48 10.1007/s00122-006-0464-2 NA NA t3711.T000487 XccR1i-1 1 Resistance to Xanthomonas campestris pv. campestris, resistance to Xanthomonas campestris pv. campestris race 1 QTL analysis R-o-18 x B162 F2 E12M48_171r NA NA 0 0 NA 0 0 15.7 18.8 10.1007/s00122-006-0464-2 NA NA t3711.T000488 XccR4d-1 1 Resistance to Xanthomonas campestris pv. campestris, resistance to Xanthomonas campestris pv. campestris race 4 QTL analysis R-o-18 x B162 F2 E12M61_215b NA NA 0 0 NA 0 0 33.5 10.55 10.1007/s00122-006-0464-2 NA NA t3711.T000489 XccR4i-1 1 Resistance to Xanthomonas campestris pv. campestris, resistance to Xanthomonas campestris pv. campestris race 4 QTL analysis R-o-18 x B162 F2 E12M61_215b NA NA 0 0 NA 0 0 33.7 6.45 10.1007/s00122-006-0464-2 NA NA t3711.T000490 XccR4i-2 1 Resistance to Xanthomonas campestris pv. campestris, resistance to Xanthomonas campestris pv. campestris race 4 QTL analysis R-o-18 x B162 F2 E11M59_178r NA NA 0 0 NA 0 0 27.6 2.94 10.1007/s00122-006-0464-2 NA NA t3711.T000491 XccR4i-3 1 Resistance to Xanthomonas campestris pv. campestris, resistance to Xanthomonas campestris pv. campestris race 4 QTL analysis R-o-18 x B162 F2 E12M48_1 > 330b NA NA 0 0 NA 0 0 27.2 2.65 10.1007/s00122-006-0464-2 NA NA t3711.T000492 6 Leaf width, leaf width_maximum estimated size GWAS R500 x IBM211 RIL 8395326 NA NA 0 0 NA 0 0 10.372 10.1111/nph.13509 NA NA t3711.T000493 6 Leaf width, leaf width_maximum estimated size GWAS R500 x IBM211 RIL 12471753 NA NA 0 0 NA 0 0 6.042 10.1111/nph.13509 NA NA t3711.T000494 5 Water use efficiency, water use efficiency (Amax/Gs) GWAS R500 x IBM211 RIL 14744369 NA NA 0 0 NA 0 0 11.451 10.1111/nph.13509 NA NA t3711.T000495 4 Leaf length, leaf length_maximum estimated size GWAS R500 x IBM211 RIL 11531882 NA NA 0 0 NA 0 0 6.388 10.1111/nph.13509 NA NA t3711.T000496 6 Leaf width, leaf width_single time point measure of final leaf size GWAS R500 x IBM211 RIL loc63 NA NA 0 0 NA 0 0 7.108 10.1111/nph.13509 NA NA t3711.T000497 6 Leaf width, leaf width_maximum estimated size GWAS R500 x IBM211 RIL loc53 NA NA 0 0 NA 0 0 11.901 10.1111/nph.13509 NA NA t3711.T000498 4 Leaf allometry (a), a parameter describing allometry: a scaling factor relating LL to LW GWAS R500 x IBM211 RIL 12722269 NA NA 0 0 NA 0 0 7.032 10.1111/nph.13509 NA NA t3711.T000499 4 Leaf allometry (a), a parameter describing allometry: a scaling factor relating LL to LW GWAS R500 x IBM211 RIL 20903550 NA NA 0 0 NA 0 0 7.357 10.1111/nph.13509 NA NA t3711.T000500 5 Stomatal conductance, stomatal conductance (mol H2O m-2 s-1) GWAS R500 x IBM211 RIL loc63 NA NA 0 0 NA 0 0 8.603 10.1111/nph.13509 NA NA t3711.T000501 6 Flowering time, Germination to Flower GWAS R500 x IBM211 RIL loc57 NA NA 0 0 NA 0 0 16.549 10.1111/nph.13509 NA NA t3711.T000502 6 Floral morphological trait, primary inflorescence height QTL analysis R500 x IMB211 RIL fito222 NA NA 0 0 NA 0 0 30.3 6.1 10.1534/genetics.110.119982 NA NA t3711.T000503 6 Leaf width QTL analysis R500 x IMB211 RIL pX110cX NA NA 0 0 NA 0 0 55.4 4.1 10.1534/genetics.110.119982 NA NA t3711.T000504 4 Floral morphological trait, midpoint length QTL analysis R500 x IMB211 RIL pW169aX NA NA 0 0 NA 0 0 91 7.4 10.1534/genetics.110.119982 NA NA t3711.T000505 4 Floral morphological trait, midpoint length QTL analysis R500 x IMB211 RIL pW120dX NA NA 0 0 NA 0 0 31.7 3.4 10.1534/genetics.110.119982 NA NA t3711.T000506 4 Floral morphological trait, Style-stigma length QTL analysis R500 x IMB211 RIL pX101dH NA NA 0 0 NA 0 0 0 4 10.1534/genetics.110.119982 NA NA t3711.T000507 4 Leaf length QTL analysis R500 x IMB211 RIL BRMS026b NA NA 0 0 NA 0 0 46.8 11.5 10.1534/genetics.110.119982 NA NA t3711.T000508 4 Floral morphological trait, midpoint length QTL analysis R500 x IMB211 RIL pX130bD NA NA 0 0 NA 0 0 41.5 5.3 10.1534/genetics.110.119982 NA NA t3711.T000509 4 Floral morphological trait, ovary length QTL analysis R500 x IMB211 RIL pW245aE NA NA 0 0 NA 0 0 10.4 4.6 10.1534/genetics.110.119982 NA NA t3711.T000510 6 Floral morphological trait, primary inflorescence height QTL analysis R500 x IMB211 RIL BRMS016 BrapaV3.0 A09 35020857 35021000 NA 0 0 22 6.2 10.1534/genetics.110.119982 t3711.M004170.1 NA t3711.T000511 4 Days to flowering QTL analysis R500 x IMB211 RIL pW155cX NA NA 0 0 NA 0 0 25.4 11.7 10.1534/genetics.110.119982 NA NA t3711.T000512 FQTL1-1 4 Seeds-per-fruit QTL analysis R500 x IMB211 RIL fito133a NA NA 0 0 NA 0 0 10.1186/1471-2229-14-66 NA NA t3711.T000513 FQTL1-2 4 Fruit length QTL analysis R500 x IMB211 RIL fito083 NA NA 0 0 NA 0 0 10.1186/1471-2229-14-66 NA NA t3711.T000514 FQTL3-1 4 Days to bolting QTL analysis R500 x IMB211 RIL pX144bE NA NA 0 0 NA 0 0 10.1186/1471-2229-14-66 NA NA t3711.T000515 FQTL4-3 4 Seeds-per-fruit QTL analysis R500 x IMB211 RIL pW178bE NA NA 0 0 NA 0 0 10.1186/1471-2229-14-66 NA NA t3711.T000516 FQTL6-1 4 Fruit length QTL analysis R500 x IMB211 RIL pX136dE NA NA 0 0 NA 0 0 10.1186/1471-2229-14-66 NA NA t3711.T000517 FQTL8-1 4 Fruit length QTL analysis R500 x IMB211 RIL BRMS006 NA NA 0 0 NA 0 0 10.1186/1471-2229-14-66 NA NA t3711.T000518 FQTL9-1 4 Seed color QTL analysis R500 x IMB211 RIL fito555 NA NA 0 0 NA 0 0 10.1186/1471-2229-14-66 NA NA t3711.T000519 GHQTL1-1 4 Seed mass QTL analysis R500 x IMB211 RIL pX136bE NA NA 0 0 NA 0 0 10.1186/1471-2229-14-66 NA NA t3711.T000520 GHQTL1-2 4 Germination percentage QTL analysis R500 x IMB211 RIL pX122aH NA NA 0 0 NA 0 0 10.1186/1471-2229-14-66 NA NA t3711.T000521 GHQTL10-1 6 Days to germination QTL analysis R500 x IMB211 RIL pW155cX NA NA 0 0 NA 0 0 10.1186/1471-2229-14-66 NA NA t3711.T000522 GHQTL10-2 4 Fruit length QTL analysis R500 x IMB211 RIL pW129dH NA NA 0 0 NA 0 0 10.1186/1471-2229-14-66 NA NA t3711.T000523 GHQTL2-1 4 Seeds-per-fruit QTL analysis R500 x IMB211 RIL fito473 NA NA 0 0 NA 0 0 10.1186/1471-2229-14-66 NA NA t3711.T000524 GHQTL3-1 4 Germination percentage QTL analysis R500 x IMB211 RIL pW152cH NA NA 0 0 NA 0 0 10.1186/1471-2229-14-66 NA NA t3711.T000525 GHQTL3-3 3 Fruit total QTL analysis R500 x IMB211 RIL pW177aH NA NA 0 0 NA 0 0 10.1186/1471-2229-14-66 NA NA t3711.T000526 GHQTL6-1 3 Fruit total QTL analysis R500 x IMB211 RIL fito227 NA NA 0 0 NA 0 0 10.1186/1471-2229-14-66 NA NA t3711.T000527 GHQTL7-1 6 Days to germination QTL analysis R500 x IMB211 RIL pW108aH NA NA 0 0 NA 0 0 10.1186/1471-2229-14-66 NA NA t3711.T000528 GHQTL8-1 6 Days to germination QTL analysis R500 x IMB211 RIL pW245bX NA NA 0 0 NA 0 0 10.1186/1471-2229-14-66 NA NA t3711.T000529 GHQTL9-1 4 Seed color QTL analysis R500 x IMB211 RIL fito367b NA NA 0 0 NA 0 0 10.1186/1471-2229-14-66 NA NA t3711.T000530 GHQTL9-2 3 Fruit total QTL analysis R500 x IMB211 RIL fito151a NA NA 0 0 NA 0 0 10.1186/1471-2229-14-66 NA NA t3711.T000531 LQTL-4 4 Leaf trait, Lamina width (cm), Leaf area (cm2), Leaf index QTL analysis RC-CC F2/3, DH-30 F2/3, DH NA NA 0 0 NA 0 0 Middle 2.33-3.16 10.1093/jxb/erm255 NA NA t3711.T000532 LQTL-7 4 Leaf trait, Lamina length (cm), Lamina width (cm), Leaf lobes, Leaf number, Petiole length (cm), Leaf index QTL analysis RC-CC F2/3, DH-30 F2/3, DH NA NA 0 0 NA 0 0 H 3.41-6.03 10.1093/jxb/erm255 NA NA t3711.T000533 FLQTL-2 4 Flowering time, Flowering time (days) QTL analysis RC-CC F2/3, DH-38, DH-30, BC1 F2/3, DH, BC NA NA 0 0 NA 0 0 Top 2.17-9.66 10.1093/jxb/erm255 NA NA t3711.T000534 LQTL-1 4 Leaf trait, Leaf lobes, Leaf number, Lamina length (cm), Petiole length (cm), Leaf area (cm2) QTL analysis RC-CC F2/3, DH-38 F2/3, DH NA NA 0 0 NA 0 0 H 2.20-6.12 10.1093/jxb/erm255 NA NA t3711.T000535 LQTL-3 4 Leaf trait, Leaf edge shape, Lamina width (cm), Leaf index QTL analysis RC-CC F2/3, DH-38 F2/3, DH NA NA 0 0 NA 0 0 Bottom 3.04-6.44 10.1093/jxb/erm255 NA NA t3711.T000536 FLQTL-4 4 Flowering time, Flowering time (days) QTL analysis RC-CC F2/3 F2:3 NA NA 0 0 NA 0 0 Top 5.01 10.1093/jxb/erm255 NA NA t3711.T000537 FLQTL-6 4 Flowering time, Flowering time (days) QTL analysis RC-CC F2/3 F2:3 NA NA 0 0 NA 0 0 H 4.26-6.02 10.1093/jxb/erm255 NA NA t3711.T000538 FLQTL-8 4 Flowering time, Flowering time (days) QTL analysis RC-CC F2/3 F2:3 NA NA 0 0 NA 0 0 Middle 4.69 10.1093/jxb/erm255 NA NA t3711.T000539 LQTL-2 4 Leaf trait, Leaf edge shape QTL analysis RC-CC F2/3 F2:3 NA NA 0 0 NA 0 0 L 3.32 10.1093/jxb/erm255 NA NA t3711.T000540 LQTL-6 4 Leaf trait, Leaf edge shape QTL analysis RC-CC F2/3 F2:3 NA NA 0 0 NA 0 0 L 3.47 10.1093/jxb/erm255 NA NA t3711.T000541 LQTL-9 4 Leaf trait, Lamina width (cm), Lamina length (cm) QTL analysis RC-CC F2/3 F2:3 NA NA 0 0 NA 0 0 Bottom 2.98-3.05 10.1093/jxb/erm255 NA NA t3711.T000542 PHQTL-1 6 Plant height, Plant height (cm) QTL analysis RC-CC F2/3 F2:3 NA NA 0 0 NA 0 0 H 6.17 10.1093/jxb/erm255 NA NA t3711.T000543 PHQTL-2 6 Plant height, Plant height (cm) QTL analysis RC-CC F2/3 F2:3 NA NA 0 0 NA 0 0 Top 3 10.1093/jxb/erm255 NA NA t3711.T000544 PHQTL-3 6 Plant height, Plant height (cm) QTL analysis RC-CC F2/3 F2:3 NA NA 0 0 NA 0 0 H 9.43 10.1093/jxb/erm255 NA NA t3711.T000545 SWQTL-1 6 Seed weight, Seed weight (mg) QTL analysis RC-CC F2/3 F2:3 NA NA 0 0 NA 0 0 Middle 2.30-3.25 10.1093/jxb/erm255 NA NA t3711.T000546 SWQTL-2 6 Seed weight, Seed weight (mg) QTL analysis RC-CC F2/3 F2:3 NA NA 0 0 NA 0 0 H 4.22 10.1093/jxb/erm255 NA NA t3711.T000547 SCA3-1 4 Seed color QTL analysis Sampad x 3-0026.027 RIL Na10A09 NA NA 0 0 BnGMS416 NA 0 0 3 4.18 10.1139/g2012-066 NA NA t3711.T000548 SCA3-1 4 Seed color QTL analysis Sampad x 3-0026.027 RIL E4451203 NA NA 0 0 E3255174 NA 0 0 128 3.8 10.1139/g2012-066 NA NA t3711.T000549 SCA3-1 4 Seed color QTL analysis Sampad x 3-0026.027 RIL nrc793 BrapaV3.0 A09 26356141 26356580 nrc794 A09 26445364 26445717 77.8 21.18 10.1139/g2012-066 t3711.M002213.1 t3711.M002214.1 t3711.T000550 SCA5-1 4 Seed color QTL analysis Sampad x 3-0026.027 RIL Na10A09 NA NA 0 0 BnGMS416 NA 0 0 3 1.21 10.1139/g2012-066 NA NA t3711.T000551 SCA9-1 4 Seed color QTL analysis Sampad x 3-0026.027 RIL E4451203 NA NA 0 0 E3255174 NA 0 0 128 3.79 10.1139/g2012-066 NA NA t3711.T000552 SCA9-2 4 Seed color QTL analysis Sampad x 3-0026.027 RIL E4451203 NA NA 0 0 E3255174 NA 0 0 128 2.58 10.1139/g2012-066 NA NA t3711.T000553 SLA3 4 Silique length QTL analysis Sampad x 3-0026.027 RIL,F4 BnGMS416 NA NA 0 0 BnGMS273 NA 0 0 9.6 5.7 10.1111/pbr.12193 NA NA t3711.T000554 SLA5 4 Silique length QTL analysis Sampad x 3-0026.027 RIL,F5 sR9477a NA NA 0 0 Ra2A04ab NA 0 0 13.5 3.5 10.1111/pbr.12193 NA NA t3711.T000555 SLA7 4 Silique length QTL analysis Sampad x 3-0026.027 RIL,F5 BRMS042 BrapaV3.0 A03 22633782 22633916 BRMS42a NA 0 0 58.6 5.9 10.1111/pbr.12193 t3711.M004108.1 NA t3711.T000556 qBrHFA-1 2 Hybrid seed formation ability QTL analysis Shogoin-kabu x Chiifu F2 BrRsCL4834s BrapaV3.0 A01 10240257 10240420 BrRsCL6120s A01 23966212 23966620 6.05 10.1007/s00122-012-2021-5 t3711.M002361.1 t3711.M002382.1 t3711.T000557 qBrHFA-1 2 Hybrid seed formation ability QTL analysis Shogoin-kabu x Chiifu F2 BrRsCL3699s NA NA 0 0 KBrB06I03s NA 0 0 4.69 10.1007/s00122-012-2021-5 t3711.M002325.1 NA t3711.T000558 qBrHFA-2 2 Hybrid seed formation ability QTL analysis Shogoin-kabu x Chiifu F2 BrRsCL7471s NA NA 0 0 KBrB092B07s NA 0 0 3.5 10.1007/s00122-012-2021-5 t3711.M002399.1 NA t3711.T000559 qBrHFA-3 2 Hybrid seed formation ability QTL analysis Shogoin-kabu x Chiifu F2 KBrH088K06s NA NA 0 0 BrRsCL4013s NA 0 0 3.8 10.1007/s00122-012-2021-5 NA t3711.M002343.1 t3711.T000560 4 The number of leaves to flowering, The number of leaves to flowering (NL) QTL analysis Tsukena No. 2 x Early F2 KBrH015H02R NA NA 0 0 NA 0 0 14 3.6 10.1007/s10681-013-1025-9 NA NA t3711.T000561 4 The number of leaves to flowering, The number of leaves to flowering (NL) QTL analysis Tsukena No. 2 x Early F2 BRMS-260 NA NA 0 0 NA 0 0 10 3.9 10.1007/s10681-013-1025-9 NA NA t3711.T000562 4 Days to bolting, The number of days to bolting (DB) QTL analysis Tsukena No. 2 x Early F2 BrFLC2 NA NA 0 0 NA 0 0 109 38.8 10.1007/s10681-013-1025-9 t3711.M004092.1 NA t3711.T000563 4 Days to bolting, The number of days to bolting (DB) QTL analysis Tsukena No. 2 x Early F2 BrFLC3 NA NA 0 0 NA 0 0 153 11.6 10.1007/s10681-013-1025-9 NA NA t3711.T000564 4 The number of leaves to flowering, The number of leaves to flowering (NL) QTL analysis Tsukena No. 2 x Early F2 BRMS-163 NA NA 0 0 NA 0 0 13 17.3 10.1007/s10681-013-1025-9 NA NA t3711.T000565 4 Days to flowering, The number of days to flowering (DF) QTL analysis Tsukena No. 2 x Early F2 BRMS-036 NA NA 0 0 NA 0 0 50 5.4 10.1007/s10681-013-1025-9 NA NA t3711.T000566 4 The number of leaves to flowering, The number of leaves to flowering (NL) QTL analysis Tsukena No. 2 x Early F2 BRMS-051 NA NA 0 0 NA 0 0 32 13.9 10.1007/s10681-013-1025-9 NA NA t3711.T000567 qCi2 4 Tissue culture response, Callus induction QTL analysis VCS3M-DH (VC1 x SR5) DH KS51030 NA NA 0 0 NA 0 0 30.1 2.6 10.1007/s00299-013-1433-2 NA NA t3711.T000568 qCi7 4 Tissue culture response, Callus induction QTL analysis VCS3M-DH (VC1 x SR5) DH KS31190 NA NA 0 0 NA 0 0 32.5 4.7 10.1007/s00299-013-1433-2 NA NA t3711.T000569 qPr6-1 4 Tissue culture response, Plant regeneration QTL analysis VCS3M-DH (VC1 x SR5) DH KS51082 NA NA 0 0 NA 0 0 37.4 3.53 10.1007/s00299-013-1433-2 NA NA t3711.T000570 qPr6-2 4 Tissue culture response, Plant regeneration QTL analysis VCS3M-DH (VC1 x SR5) DH B007A19-3 NA NA 0 0 NA 0 0 81.9 3.7 10.1007/s00299-013-1433-2 NA NA t3711.T000571 qPr7 4 Tissue culture response, Plant regeneration QTL analysis VCS3M-DH (VC1 x SR5) DH B085F18-4 NA NA 0 0 NA 0 0 8 2.5 10.1007/s00299-013-1433-2 NA NA t3711.T000572 1GWA10 6 Yield-related trait, gross weight (GW) QTL analysis WZ x FT DH me03em15-04 NA NA 0 0 me06em17-02 NA 0 0 40.6 10.1007/s10681-013-0931-1 NA NA t3711.T000573 1GWA9a 6 Yield-related trait, gross weight (GW) QTL analysis WZ x FT DH me07em17-01 NA NA 0 0 me08em11-05 NA 0 0 61 10.1007/s10681-013-0931-1 NA NA t3711.T000574 1GWA9b 6 Yield-related trait, gross weight (GW) QTL analysis WZ x FT DH me08em11-03 NA NA 0 0 nia_m003a A09 30856866 30857428 74.5 10.1007/s10681-013-0931-1 NA t3711.M001129.1 t3711.T000575 1HGRA3 6 Yield-related trait, head weight/gross weight ratio (HGR) QTL analysis WZ x FT DH cnu_m079a BrapaV3.0 A08 17963438 17963618 me08em15-06 NA 0 0 47.4 10.1007/s10681-013-0931-1 t3711.M003696.1 NA t3711.T000576 1HLA1 6 Yield-related trait, head length (HL) QTL analysis WZ x FT DH me11em11-06 NA NA 0 0 me03em15-03 NA 0 0 109.2 10.1007/s10681-013-0931-1 NA NA t3711.T000577 1HLA10 6 Yield-related trait, head length (HL) QTL analysis WZ x FT DH me13em09-01 NA NA 0 0 me09em09-02 NA 0 0 23.3 10.1007/s10681-013-0931-1 NA NA t3711.T000578 1HLA9 6 Yield-related trait, head length (HL) QTL analysis WZ x FT DH me03em09-15 NA NA 0 0 me08em11-03 NA 0 0 68.4 10.1007/s10681-013-0931-1 NA NA t3711.T000579 1HNLWA10 6 Yield-related trait, head non-petiole leaves weight (HNLW) QTL analysis WZ x FT DH me02em09-03 NA NA 0 0 me07em15-02 NA 0 0 43.3 10.1007/s10681-013-0931-1 NA NA t3711.T000580 1HNLWA9 6 Yield-related trait, head non-petiole leaves weight (HNLW) QTL analysis WZ x FT DH nia_m003a BrapaV3.0 A09 30856866 30857428 me05em01-03 NA 0 0 76.8 10.1007/s10681-013-0931-1 t3711.M001129.1 NA t3711.T000581 1HPWA10 6 Yield-related trait, head petiole weight (HPW) QTL analysis WZ x FT DH me06em17-02 NA NA 0 0 me03em15-05 NA 0 0 40.7 10.1007/s10681-013-0931-1 NA NA t3711.T000582 1HPWA9a 6 Yield-related trait, head petiole weight (HPW) QTL analysis WZ x FT DH me07em17-01 NA NA 0 0 me08em11-05 NA 0 0 61 10.1007/s10681-013-0931-1 NA NA t3711.T000583 1HPWA9b 6 Yield-related trait, head petiole weight (HPW) QTL analysis WZ x FT DH me08em11-03 NA NA 0 0 nia_m003a A09 30856866 30857428 75.5 10.1007/s10681-013-0931-1 NA t3711.M001129.1 t3711.T000584 1HRA1 6 Yield-related trait, head length/head width ratio (HR) QTL analysis WZ x FT DH me11em11-06 NA NA 0 0 me03em15-03 NA 0 0 110.2 10.1007/s10681-013-0931-1 NA NA t3711.T000585 1HRA5 6 Yield-related trait, head length/head width ratio (HR) QTL analysis WZ x FT DH me06em18-05 NA NA 0 0 cnu_m344a A05 5064597 5064731 72.1 10.1007/s10681-013-0931-1 NA t3711.M001069.1 t3711.T000586 1HRA6 6 Yield-related trait, head length/head width ratio (HR) QTL analysis WZ x FT DH me02em13-01 NA NA 0 0 me04em01-03 NA 0 0 34.9 10.1007/s10681-013-0931-1 NA NA t3711.T000587 1HRA8 6 Yield-related trait, head length/head width ratio (HR) QTL analysis WZ x FT DH cnu_m537a BrapaV3.0 A08 17579324 17579517 me09em13-04 NA 0 0 65.1 10.1007/s10681-013-0931-1 t3711.M001111.1 NA t3711.T000588 1HWTA10 6 Yield-related trait, head weight (HWT) QTL analysis WZ x FT DH me03em15-04 NA NA 0 0 me06em17-02 NA 0 0 40.6 10.1007/s10681-013-0931-1 NA NA t3711.T000589 1HWTA9 6 Yield-related trait, head weight (HWT) QTL analysis WZ x FT DH me08em11 NA NA 0 0 03-nia_m003a NA 0 0 75.5 10.1007/s10681-013-0931-1 NA NA t3711.T000590 1NALA10 6 Yield-related trait, number of all leaves (NAL) QTL analysis WZ x FT DH me04em01-04 NA NA 0 0 me02em05-01 NA 0 0 39.8 10.1007/s10681-013-0931-1 NA NA t3711.T000591 1NHLA9 6 Yield-related trait, number of head-forming leaves (NHL) QTL analysis WZ x FT DH me07em17-01 NA NA 0 0 me08em11-05 NA 0 0 61 10.1007/s10681-013-0931-1 NA NA t3711.T000592 1NNLA10 6 Yield-related trait, number of non-wrapper leaves (NNL) QTL analysis WZ x FT DH me02em05-02 NA NA 0 0 me04em01-04 NA 0 0 39.3 10.1007/s10681-013-0931-1 NA NA t3711.T000593 2GWA6 6 Yield-related trait, gross weight (GW) QTL analysis WZ x FT DH me03em16-01 NA NA 0 0 nia_m049a A06 8070080 8070403 8.1 10.1007/s10681-013-0931-1 NA t3711.M001151.1 t3711.T000594 2HGRA1 6 Yield-related trait, head weight/gross weight ratio (HGR) QTL analysis WZ x FT DH me05em14-03 NA NA 0 0 me06em18-06 NA 0 0 76 10.1007/s10681-013-0931-1 NA NA t3711.T000595 2HGRA3 6 Yield-related trait, head weight/gross weight ratio (HGR) QTL analysis WZ x FT DH me05em14-05 NA NA 0 0 me02em12-03 NA 0 0 27.8 10.1007/s10681-013-0931-1 NA NA t3711.T000596 2HGRA9 6 Yield-related trait, head weight/gross weight ratio (HGR) QTL analysis WZ x FT DH me02em09-02 NA NA 0 0 me04em12-01 NA 0 0 42.6 10.1007/s10681-013-0931-1 NA NA t3711.T000597 2HLA1 6 Yield-related trait, head length (HL) QTL analysis WZ x FT DH me03em09-01 NA NA 0 0 cnu_m461a A01 24852519 24852709 80.4 10.1007/s10681-013-0931-1 NA t3711.M001094.1 t3711.T000598 2HLA2 6 Yield-related trait, head length (HL) QTL analysis WZ x FT DH me13em14-02 NA NA 0 0 nia_m143a A02 4276117 4276432 77.2 10.1007/s10681-013-0931-1 NA t3711.M003646.1 t3711.T000599 2HLA6 6 Yield-related trait, head length (HL) QTL analysis WZ x FT DH me13em09-02 NA NA 0 0 me11em11-07 NA 0 0 27.8 10.1007/s10681-013-0931-1 NA NA t3711.T000600 2HLA8 6 Yield-related trait, head length (HL) QTL analysis WZ x FT DH me09em13-04 NA NA 0 0 nia_m095a A08 14487730 14488006 74.9 10.1007/s10681-013-0931-1 NA t3711.M001173.1 t3711.T000601 2HPWA4 6 Yield-related trait, head petiole weight (HPW) QTL analysis WZ x FT DH me12em05-02 NA NA 0 0 cnu_m256a A04 19221404 19221701 13.4 10.1007/s10681-013-0931-1 NA t3711.M001044.1 t3711.T000602 2HPWA6 6 Yield-related trait, head petiole weight (HPW) QTL analysis WZ x FT DH me03em16-01 NA NA 0 0 nia_m049a A06 8070080 8070403 7.1 10.1007/s10681-013-0931-1 NA t3711.M001151.1 t3711.T000603 2HPWA9 6 Yield-related trait, head petiole weight (HPW) QTL analysis WZ x FT DH me05em01-01 NA NA 0 0 me13em14-04 NA 0 0 86.5 10.1007/s10681-013-0931-1 NA NA t3711.T000604 2HRA1 6 Yield-related trait, head length/head width ratio (HR) QTL analysis WZ x FT DH me03em09-01 NA NA 0 0 cnu_m461a A01 24852519 24852709 85.4 10.1007/s10681-013-0931-1 NA t3711.M001094.1 t3711.T000605 2HRA4 6 Yield-related trait, head length/head width ratio (HR) QTL analysis WZ x FT DH me11em02-06 NA NA 0 0 me09em13-02 NA 0 0 46.2 10.1007/s10681-013-0931-1 NA NA t3711.T000606 2HRA5 6 Yield-related trait, head length/head width ratio (HR) QTL analysis WZ x FT DH me06em18-05 NA NA 0 0 cnu_m344a A05 5064597 5064731 73.1 10.1007/s10681-013-0931-1 NA t3711.M001069.1 t3711.T000607 2HRA6 6 Yield-related trait, head length/head width ratio (HR) QTL analysis WZ x FT DH me11em11-07 NA NA 0 0 me02em13-01 NA 0 0 31.1 10.1007/s10681-013-0931-1 NA NA t3711.T000608 2HRA9 6 Yield-related trait, head length/head width ratio (HR) QTL analysis WZ x FT DH me02em09-02 NA NA 0 0 me04em12-01 NA 0 0 42.6 10.1007/s10681-013-0931-1 NA NA t3711.T000609 2HWA5 6 Yield-related trait, head width (HW) QTL analysis WZ x FT DH cnu_m344a BrapaV3.0 A05 5064597 5064731 me04em12-04 NA 0 0 81.3 10.1007/s10681-013-0931-1 t3711.M001069.1 NA t3711.T000610 2HWTA6 6 Yield-related trait, head weight (HWT) QTL analysis WZ x FT DH me03em16 NA NA 0 0 01-nia_m049a NA 0 0 8.1 10.1007/s10681-013-0931-1 NA NA t3711.T000611 2NALA10 6 Yield-related trait, number of all leaves (NAL) QTL analysis WZ x FT DH me06em18-01 NA NA 0 0 me13em07-01 NA 0 0 3 10.1007/s10681-013-0931-1 NA NA t3711.T000612 2NALA3 6 Yield-related trait, number of all leaves (NAL) QTL analysis WZ x FT DH me13em12-04 NA NA 0 0 me07em02-06 NA 0 0 119 10.1007/s10681-013-0931-1 NA NA t3711.T000613 2NHLA10 6 Yield-related trait, number of head-forming leaves (NHL) QTL analysis WZ x FT DH me06em18-01 NA NA 0 0 me13em07-01 NA 0 0 2 10.1007/s10681-013-0931-1 NA NA t3711.T000614 2NHLA9 6 Yield-related trait, number of head-forming leaves (NHL) QTL analysis WZ x FT DH nia_m027 NA NA 0 0 me02em07-03 NA 0 0 57.4 10.1007/s10681-013-0931-1 NA NA t3711.T000615 2NNLA1 6 Yield-related trait, number of non-wrapper leaves (NNL) QTL analysis WZ x FT DH me03em09-01 NA NA 0 0 cnu_m461a A01 24852519 24852709 87.4 10.1007/s10681-013-0931-1 NA t3711.M001094.1 t3711.T000616 2NNLA7 6 Yield-related trait, number of non-wrapper leaves (NNL) QTL analysis WZ x FT DH me06em08-02 NA NA 0 0 nia_m043a A07 19951136 19951441 43.6 10.1007/s10681-013-0931-1 NA t3711.M004033.1 t3711.T000617 2NNLA9 6 Yield-related trait, number of non-wrapper leaves (NNL) QTL analysis WZ x FT DH me11em11-08 NA NA 0 0 me02em09-02 NA 0 0 36.1 10.1007/s10681-013-0931-1 NA NA t3711.T000618 4 Turnip formation, Turnip weight-fourth root transformed QTL analysis Y-54 x PO2 F2 BRMS-155 NA NA 0 0 BRMS-220 NA 0 0 31.5 8.9 10.1270/jsbbs.60.164 NA NA t3711.T000619 4 Turnip formation, Turnip size-fourth root transformed QTL analysis Y-54 x PO2 F2 ENA23b NA NA 0 0 ENA2b NA 0 0 67.2 7.4 10.1270/jsbbs.60.164 NA NA t3711.T000620 4 Turnip formation, Turnip size-fourth root transformed QTL analysis Y-54 x PO2 F2 ENA10a NA NA 0 0 BRMS-307b NA 0 0 44.7 9.2 10.1270/jsbbs.60.164 NA NA t3711.T000621 4 Pubescence on leaf surface QTL analysis Y-54 x PO2 F2 E6M8_154 NA NA 0 0 E3M7-87 NA 0 0 87.4 30.9 10.1270/jsbbs.60.164 NA NA t3711.T000622 4 Head formation QTL analysis Y-54 x PO2 F2 E2M2-61dCAPS NA NA 0 0 E4M5-168 NA 0 0 44.8 4.8 10.1270/jsbbs.60.164 t3711.M002415.1 NA t3711.T000623 4 Leaf lobe QTL analysis Y-54 x PO2 F2 ENA18 BrapaV3.0 A10 18505985 18506084 E1M7-228 NA 0 0 62 14.6 10.1270/jsbbs.60.164 t3711.M004174.1 NA t3711.T000624 DBFQTL1 4 Days from bolting to bud formation QTL analysis Yellow Sarson C634 x Osome DH line P11 F2 BrSTs BrapaV3.0 A07 28656481 28656773 BRGGRp A02 13044431 13045151 9.8 10.1093/dnares/dsp020 t3711.M001324.1 t3711.M001238.1 t3711.T000625 DBOQTL1 4 Days to bolting QTL analysis Yellow Sarson C634 x Osome DH line P11 F2 BrRS2CL1605 NA NA 0 0 BrBELLs A02 257303 257557 6 10.1093/dnares/dsp020 NA t3711.M001404.1 t3711.T000626 DBOQTL1 4 Days to bolting QTL analysis Yellow Sarson C634 x Osome DH line P11 F2 BrSTs BrapaV3.0 A07 28656481 28656773 BRGGRp A02 13044431 13045151 8.4 10.1093/dnares/dsp020 t3711.M001324.1 t3711.M001238.1 t3711.T000627 DBOQTL1 4 Days to bolting QTL analysis Yellow Sarson C634 x Osome DH line P11 F2 KBrH080A08p NA NA 0 0 BrA9 NA 0 0 - 10.1093/dnares/dsp020 t3711.M001268.1 NA t3711.T000628 DBOQTL2 4 Days to bolting QTL analysis Yellow Sarson C634 x Osome DH line P11 F2 BrRS2CL1605 NA NA 0 0 BrBELLs A02 257303 257557 6.7 10.1093/dnares/dsp020 NA t3711.M001404.1 t3711.T000629 DBOQTL3 4 Days to bolting QTL analysis Yellow Sarson C634 x Osome DH line P11 F2 BrSTs BrapaV3.0 A07 28656481 28656773 BRGGRp A02 13044431 13045151 11.5 10.1093/dnares/dsp020 t3711.M001324.1 t3711.M001238.1 t3711.T000630 DBUQTL1 4 Days to budding QTL analysis Yellow Sarson C634 x Osome DH line P11 F2 BrRS2CL1605 NA NA 0 0 BrBELLs A02 257303 257557 11.7 10.1093/dnares/dsp020 NA t3711.M001404.1 t3711.T000631 DBUQTL1 4 Days to budding QTL analysis Yellow Sarson C634 x Osome DH line P11 F2 KBrH080A08p NA NA 0 0 BrA9 NA 0 0 - 10.1093/dnares/dsp020 t3711.M001268.1 NA t3711.T000632 DBUQTL2 4 Days to budding QTL analysis Yellow Sarson C634 x Osome DH line P11 F2 BrRS2CL1605 NA NA 0 0 BrBELLs A02 257303 257557 10.6 10.1093/dnares/dsp020 NA t3711.M001404.1 t3711.T000633 DFLQTL1 4 Days to flowering QTL analysis Yellow Sarson C634 x Osome DH line P11 F2 BrRS2CL1605 NA NA 0 0 BrBELLs A02 257303 257557 5.4 10.1093/dnares/dsp020 NA t3711.M001404.1 t3711.T000634 DFLQTL1 4 Days to flowering QTL analysis Yellow Sarson C634 x Osome DH line P11 F2 KBrH080A08p NA NA 0 0 BrA9 NA 0 0 - 10.1093/dnares/dsp020 t3711.M001268.1 NA t3711.T000635 DFLQTL2 4 Days to flowering QTL analysis Yellow Sarson C634 x Osome DH line P11 F2 BrRS2CL1605 NA NA 0 0 BrBELLs A02 257303 257557 8.5 10.1093/dnares/dsp020 NA t3711.M001404.1 t3711.T000636 LDRQTL1 4 Leaf morphological trait, lobe depth ratio QTL analysis Yellow Sarson C634 x Osome DH line P11 F2 BrADs NA NA 0 0 BrRS2CL1965s A03 8077984 8078281 - 10.1093/dnares/dsp020 t3711.M001278.1 t3711.M001363.1 t3711.T000637 LDRQTL1 4 Leaf morphological trait, lobe depth ratio QTL analysis Yellow Sarson C634 x Osome DH line P11 F2 KBrH080A08p NA NA 0 0 BrRS2CL2387s NA 0 0 13 10.1093/dnares/dsp020 t3711.M001268.1 t3711.M001381.1 t3711.T000638 LDRQTL2 4 Leaf morphological trait, lobe depth ratio QTL analysis Yellow Sarson C634 x Osome DH line P11 F2 KBrH080A08p NA NA 0 0 BrRS2CL2387s NA 0 0 19.8 10.1093/dnares/dsp020 t3711.M001268.1 t3711.M001381.1 t3711.T000639 LHQTL1 4 Leaf morphological trait, leaf hairiness QTL analysis Yellow Sarson C634 x Osome DH line P11 F2 BrADs NA NA 0 0 BrRS2CL1965s A03 8077984 8078281 - 10.1093/dnares/dsp020 t3711.M001278.1 t3711.M001363.1 t3711.T000640 LHQTL1 4 Leaf morphological trait, leaf hairiness QTL analysis Yellow Sarson C634 x Osome DH line P11 F2 KBrB021P11s BrapaV3.0 A06 27307128 27307556 BrTTG1s A06 21924766 21925102 40.9 10.1093/dnares/dsp020 t3711.M001419.1 t3711.M001409.1 t3711.T000641 LHQTL2 4 Leaf morphological trait, leaf hairiness QTL analysis Yellow Sarson C634 x Osome DH line P11 F2 KBrB021P11s BrapaV3.0 A06 27307128 27307556 BrTTG1s A06 21924766 21925102 23 10.1093/dnares/dsp020 t3711.M001419.1 t3711.M001409.1 t3711.T000642 5 Anthocyanin content, total anthocyanin content QTL analysis zicaitai x caixin F2 BrID11259 NA NA 0 0 BrID11861 NA 0 0 64.1 22.95 10.1007/s11032-015-0237-1 NA NA t3711.T000001 Height17-LG4 4 Tree Height CIM Genotypes F1 NA 0 0 0 0 43.41 6.72 10.3389/fpls.2018.01255 NA NA t3711.T000002 Height17-LG9 4 Tree Height CIM Genotypes F1 NA 0 0 0 0 196.26 5.28 10.3389/fpls.2018.01255 NA NA t3711.T000003 Height17-LG15 4 Tree Height CIM Genotypes F1 NA 0 0 0 0 108 4.23 10.3389/fpls.2018.01255 NA NA t3711.T000004 Height17-LG18 4 Tree Height CIM Genotypes F1 NA 0 0 0 0 251.44 4.6 10.3389/fpls.2018.01255 NA NA t3711.T000005 Height22-LG5 4 Tree Height CIM Genotypes F1 NA 0 0 0 0 15 5.7 10.3389/fpls.2018.01255 NA NA t3711.T000006 Height22-LG6 4 Tree Height CIM Genotypes F1 NA 0 0 0 0 155.55 4.89 10.3389/fpls.2018.01255 NA NA t3711.T000007 Height22-LG11 4 Tree Height CIM Genotypes F1 NA 0 0 0 0 189 4.37 10.3389/fpls.2018.01255 NA NA t3711.T000008 Whorls17-LG4 4 Number of Whorls CIM Genotypes F1 NA 0 0 0 0 49.91 7.27 10.3389/fpls.2018.01255 NA NA t3711.T000009 Whorls17-LG14 4 Number of Whorls CIM Genotypes F1 NA 0 0 0 0 26 4.13 10.3389/fpls.2018.01255 NA NA t3711.T000010 Whorls17-LG15 4 Number of Whorls CIM Genotypes F1 NA 0 0 0 0 105.19 5.56 10.3389/fpls.2018.01255 NA NA t3711.T000011 Whorls22-LG4 4 Number of Whorls CIM Genotypes F1 NA 0 0 0 0 6.04 8.59 10.3389/fpls.2018.01255 NA NA t3711.T000012 Whorls22-LG8 4 Number of Whorls CIM Genotypes F1 NA 0 0 0 0 71.1 4.78 10.3389/fpls.2018.01255 NA NA t3711.T000013 Whorls22-LG12 4 Number of Whorls CIM Genotypes F1 NA 0 0 0 0 152.15 6.26 10.3389/fpls.2018.01255 NA NA t3711.T000014 Whorls22-LG15 4 Number of Whorls CIM Genotypes F1 NA 0 0 0 0 121.11 4.49 10.3389/fpls.2018.01255 NA NA t3711.T000015 Diameter12-LG2 4 Stem Diameter CIM Genotypes F1 NA 0 0 0 0 157.93 4.22 10.3389/fpls.2018.01255 NA NA t3711.T000016 Diameter12-LG4 4 Stem Diameter CIM Genotypes F1 NA 0 0 0 0 34.77 5.69 10.3389/fpls.2018.01255 NA NA t3711.T000017 Diameter12-LG6 4 Stem Diameter CIM Genotypes F1 NA 0 0 0 0 170 4.72 10.3389/fpls.2018.01255 NA NA t3711.T000018 Diameter12-LG9 4 Stem Diameter CIM Genotypes F1 NA 0 0 0 0 196.26 4.73 10.3389/fpls.2018.01255 NA NA t3711.T000019 Diameter12-LG17 4 Stem Diameter CIM Genotypes F1 NA 0 0 0 0 11.05 4.71 10.3389/fpls.2018.01255 NA NA t3711.T000020 Diameter17-LG4 4 Stem Diameter CIM Genotypes F1 NA 0 0 0 0 49.91 8.08 10.3389/fpls.2018.01255 NA NA t3711.T000021 Diameter17-LG6 4 Stem Diameter CIM Genotypes F1 NA 0 0 0 0 163.63 5.09 10.3389/fpls.2018.01255 NA NA t3711.T000022 Diameter17-LG9 4 Stem Diameter CIM Genotypes F1 NA 0 0 0 0 193 5.85 10.3389/fpls.2018.01255 NA NA t3711.T000023 Diameter17-LG17 4 Stem Diameter CIM Genotypes F1 NA 0 0 0 0 35 5.99 10.3389/fpls.2018.01255 NA NA t3711.T000024 Diameter22-LG5 4 Stem Diameter CIM Genotypes F1 NA 0 0 0 0 6.74 4.66 10.3389/fpls.2018.01255 NA NA t3711.T000025 Diameter22-LG9 4 Stem Diameter CIM Genotypes F1 NA 0 0 0 0 196.26 6.75 10.3389/fpls.2018.01255 NA NA t3711.T000026 Diameter22-LG15 4 Stem Diameter CIM Genotypes F1 NA 0 0 0 0 118 8.76 10.3389/fpls.2018.01255 NA NA t3711.T000027 Diameter28-LG5 4 Stem Diameter CIM Genotypes F1 NA 0 0 0 0 8 8.21 10.3389/fpls.2018.01255 NA NA t3711.T000028 Diameter28-LG8 4 Stem Diameter CIM Genotypes F1 NA 0 0 0 0 229.67 4.52 10.3389/fpls.2018.01255 NA NA t3711.T000029 Diameter28-LG11 4 Stem Diameter CIM Genotypes F1 NA 0 0 0 0 91 6.24 10.3389/fpls.2018.01255 NA NA t3711.T000030 Diameter28-LG12 4 Stem Diameter CIM Genotypes F1 NA 0 0 0 0 27 7.63 10.3389/fpls.2018.01255 NA NA t3711.T000031 Diameter35-LG4 4 Stem Diameter CIM Genotypes F1 NA 0 0 0 0 37 10.06 10.3389/fpls.2018.01255 NA NA t3711.T000032 Diameter35-LG12 4 Stem Diameter CIM Genotypes F1 NA 0 0 0 0 136 5.74 10.3389/fpls.2018.01255 NA NA t3711.T000033 Diameter35-LG17 4 Stem Diameter CIM Genotypes F1 NA 0 0 0 0 24 6.68 10.3389/fpls.2018.01255 NA NA t3711.T000034 Diameter47-LG4 4 Stem Diameter CIM Genotypes F1 NA 0 0 0 0 28 6.29 10.3389/fpls.2018.01255 NA NA t3711.T000035 Diameter47-LG17 4 Stem Diameter CIM Genotypes F1 NA 0 0 0 0 11.05 4.37 10.3389/fpls.2018.01255 NA NA t3711.T000036 Diameter59-LG9 4 Stem Diameter CIM Genotypes F1 NA 0 0 0 0 144 5.61 10.3389/fpls.2018.01255 NA NA t3711.T000037 Diameter59-LG12 4 Stem Diameter CIM Genotypes F1 NA 0 0 0 0 24.24 4.97 10.3389/fpls.2018.01255 NA NA t3711.T000038 Diameter59-LG15 4 Stem Diameter CIM Genotypes F1 NA 0 0 0 0 224 4.15 10.3389/fpls.2018.01255 NA NA