t4072.T000001 fs10.1 4 Fruit width (mm) QTL analysis 100/63 x IL 579 F2 TG63 NA NA 0 0 NA 0 0 21.7 10.1007/s00122-002-1132-9 NA NA t4072.T000002 4 Fruit width (mm) QTL analysis 100/63 x IL152 F2 TG130 NA NA 0 0 NA 0 0 12.1 10.1139/g02-096 NA NA t4072.T000003 1 resistance to thrips, survival of first stage instar larval to second stage QTL analysis AC 1979 (C. annuum) x 4661 (C. chinense) F2 HpmsE078 V2.0 Chr06 22742555 22742757 NA 0 0 108.4 24.3 10.1007/s00122-015-2558-1 t4072.M005883.1 NA t4072.T000004 4 trichome density, trichome density at reproductive stage QTL analysis AC 1979 (C. annuum) x 4661 (C. chinense) F2 HpmsE031 V2.0 Chr10 204004861 204005031 NA 0 0 40.5 27.5 10.1007/s00122-015-2558-1 t4072.M005785.1 NA t4072.T000005 cap 6 Capsaicin, capsaicin content QTL analysis AF F2 CT84 NA NA 0 0 NA 0 0 14.9 10.1007/s00122-003-1405-y NA NA t4072.T000006 qcmv.hb-16.1 1 CMV (cucumber mosaic virus) resistance QTL analysis BJ0747 x XJ0630 F2:3 HpmsE040 NA NA 0 0 LEat014 NA 0 0 32.4 2.67 10.1007/s10681-013-0953-8 t4072.M005849.1 NA t4072.T000007 qcmv.hb-4.1 1 CMV (cucumber mosaic virus) resistance QTL analysis BJ0747 x XJ0630 F2:3 LEtat002 NA NA 0 0 S74 NA 0 0 112 5.02 10.1007/s10681-013-0953-8 NA NA t4072.T000008 qcmv.hb-7.1 1 CMV (cucumber mosaic virus) resistance QTL analysis BJ0747 x XJ0630 F2:3 S48 NA NA 0 0 HpmsE95 NA 0 0 1.9 2.55 10.1007/s10681-013-0953-8 NA NA t4072.T000009 qcmv.hb-8.1 1 CMV (cucumber mosaic virus) resistance QTL analysis BJ0747 x XJ0630 F2:3 TS471 NA NA 0 0 TS52 NA 0 0 30.7 2.62 10.1007/s10681-013-0953-8 NA NA t4072.T000010 qcmv.hb-8.2 1 CMV (cucumber mosaic virus) resistance QTL analysis BJ0747 x XJ0630 F2:3 TS52 NA NA 0 0 HpmsE1-43 NA 0 0 67.9 6.86 10.1007/s10681-013-0953-8 NA NA t4072.T000011 qcmv.hb-8.3 1 CMV (cucumber mosaic virus) resistance QTL analysis BJ0747 x XJ0630 F2:3 S63 NA NA 0 0 S38 NA 0 0 200.5 3.97 10.1007/s10681-013-0953-8 NA NA t4072.T000012 4 Shape QTL analysis C. annuum x C. baccatum BC2 BC2S1 CA-1409 NA NA 0 0 NA 0 0 16.8 23.1 10.1007/s00122-013-2225-3 NA NA t4072.T000013 5 p-Menth-1-en-9-al QTL analysis C. annuum x C. baccatum BC2 BC2S1 CA-1188 NA NA 0 0 NA 0 0 20.2 4.1 10.1007/s00122-013-2225-3 NA NA t4072.T000014 5 Odor QTL analysis C. annuum x C. baccatum BC2 BC2S1 CA-1268 NA NA 0 0 NA 0 0 33.3 8 10.1007/s00122-013-2225-3 NA NA t4072.T000015 4 Width1 QTL analysis C. annuum x C. baccatum BC2 BC2S1 CA-1283 NA NA 0 0 NA 0 0 36.5 3.6 10.1007/s00122-013-2225-3 NA NA t4072.T000016 4 Width1 QTL analysis C. annuum x C. baccatum BC2 BC2S1 CA-1566 NA NA 0 0 NA 0 0 1 4.4 10.1007/s00122-013-2225-3 NA NA t4072.T000017 4 Width1 QTL analysis C. annuum x C. baccatum BC2 BC2S1 CA-0576 NA NA 0 0 NA 0 0 37.6 7.8 10.1007/s00122-013-2225-3 NA NA t4072.T000018 5 Color unripe QTL analysis C. annuum x C. baccatum BC2 BC2S1 CA-1481 NA NA 0 0 NA 0 0 18.5 40.1 10.1007/s00122-013-2225-3 NA NA t4072.T000019 4 Shape QTL analysis C. annuum x C. baccatum BC2 BC2S1 CA-1512 NA NA 0 0 NA 0 0 7.4 7.2 10.1007/s00122-013-2225-3 NA NA t4072.T000020 5 Color ripe QTL analysis C. annuum x C. baccatum BC2 BC2S1 CA-0038 NA NA 0 0 NA 0 0 0 4.6 10.1007/s00122-013-2225-3 NA NA t4072.T000021 5 Color ripe QTL analysis C. annuum x C. baccatum BC2 BC2S1 CA-1209 NA NA 0 0 NA 0 0 0 8.1 10.1007/s00122-013-2225-3 NA NA t4072.T000022 5 Color ripe QTL analysis C. annuum x C. baccatum BC2 BC2S1 CA-0323 NA NA 0 0 NA 0 0 1.2 8 10.1007/s00122-013-2225-3 NA NA t4072.T000023 6 Pungency QTL analysis C. annuum x C. baccatum BC2 BC2S1 CA-0701 NA NA 0 0 NA 0 0 15.4 99.9 10.1007/s00122-013-2225-3 NA NA t4072.T000024 5 Crunchy QTL analysis C. annuum x C. baccatum BC2 BC2S1 CA-1338 NA NA 0 0 NA 0 0 14.7 2.8 10.1007/s00122-013-2225-3 NA NA t4072.T000025 5 Color ripe QTL analysis C. annuum x C. baccatum BC2 BC2S1 CA-0097 NA NA 0 0 NA 0 0 6.1 7.8 10.1007/s00122-013-2225-3 NA NA t4072.T000026 4 Length1 QTL analysis C. annuum x C. baccatum BC2 BC2S1 CA-0270 NA NA 0 0 NA 0 0 78.2 5.3 10.1007/s00122-013-2225-3 NA NA t4072.T000027 4 Width1 QTL analysis C. annuum x C. baccatum BC2 BC2S1 CA-1423 NA NA 0 0 NA 0 0 0 6.7 10.1007/s00122-013-2225-3 NA NA t4072.T000028 5 Citrate QTL analysis C. annuum x C. baccatum BC2 BC2S1 CA-1436 NA NA 0 0 NA 0 0 0 3.1 10.1007/s00122-013-2225-3 NA NA t4072.T000029 fs10.1 4 Fruit shape QTL analysis Capsicum annuum 5226 x Capsicum chinense PI 159234 F2 A NA NA 0 0 NA 0 0 11.6 10.1007/s00122-002-1132-9 NA NA t4072.T000030 fd1.1 6 Fruit diameter (mm) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG44 NA NA 0 0 NA 0 0 5.62 10.1007/s00122-003-1204-5 NA NA t4072.T000031 fd10.1 6 Fruit diameter (mm) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 CT-57 NA NA 0 0 NA 0 0 3.73 10.1007/s00122-003-1204-5 NA NA t4072.T000032 fd11.1 6 Fruit diameter (mm) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG441 NA NA 0 0 NA 0 0 6.33 10.1007/s00122-003-1204-5 NA NA t4072.T000033 fd11.2 6 Fruit diameter (mm) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG36 NA NA 0 0 NA 0 0 5.19 10.1007/s00122-003-1204-5 NA NA t4072.T000034 fd2.1 6 Fruit diameter (mm) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 CD38 NA NA 0 0 NA 0 0 7.61 10.1007/s00122-003-1204-5 NA NA t4072.T000035 fd3.1 6 Fruit diameter (mm) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG130 NA NA 0 0 NA 0 0 6.85 10.1007/s00122-003-1204-5 NA NA t4072.T000036 fd3.2 6 Fruit diameter (mm) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG359 NA NA 0 0 NA 0 0 4.8 10.1007/s00122-003-1204-5 NA NA t4072.T000037 fd4.1 6 Fruit diameter (mm) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG208 NA NA 0 0 NA 0 0 5.8 10.1007/s00122-003-1204-5 NA NA t4072.T000038 fd4.2 6 Fruit diameter (mm) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG62 NA NA 0 0 NA 0 0 6.14 10.1007/s00122-003-1204-5 NA NA t4072.T000039 fd8.1 6 Fruit diameter (mm) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2 CT28 NA NA 0 0 NA 0 0 5.13 10.1007/s00122-003-1204-5 NA NA t4072.T000040 fl1.1 6 Fruit length (mm) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG44 NA NA 0 0 NA 0 0 4.9 10.1007/s00122-003-1204-5 NA NA t4072.T000041 fl1.2 6 Fruit length (mm) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG19 NA NA 0 0 NA 0 0 5.67 10.1007/s00122-003-1204-5 NA NA t4072.T000042 fl2.1 6 Fruit length (mm) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 CD38 NA NA 0 0 NA 0 0 15.27 10.1007/s00122-003-1204-5 NA NA t4072.T000043 fl3.1 6 Fruit length (mm) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2 TG359 NA NA 0 0 NA 0 0 9.26 10.1007/s00122-003-1204-5 NA NA t4072.T000044 fl7.1 6 Fruit length (mm) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG216 NA NA 0 0 NA 0 0 4.47 10.1007/s00122-003-1204-5 NA NA t4072.T000045 fl8.1 6 Fruit length (mm) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG420P NA NA 0 0 NA 0 0 4.5 10.1007/s00122-003-1204-5 NA NA t4072.T000046 flw1.1 6 Flowering QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG19 NA NA 0 0 NA 0 0 7.34 10.1007/s00122-003-1204-5 NA NA t4072.T000047 flw10.1 6 Flowering QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 CT154 NA NA 0 0 NA 0 0 5.89 10.1007/s00122-003-1204-5 NA NA t4072.T000048 flw2.1 6 Flowering QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG191 NA NA 0 0 NA 0 0 4.56 10.1007/s00122-003-1204-5 NA NA t4072.T000049 flw2.2 6 Flowering QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG48 NA NA 0 0 NA 0 0 4.55 10.1007/s00122-003-1204-5 NA NA t4072.T000050 flw3.1 6 Flowering QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG130 NA NA 0 0 NA 0 0 3.68 10.1007/s00122-003-1204-5 NA NA t4072.T000051 flw4.1 6 Flowering QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG208 NA NA 0 0 NA 0 0 3.75 10.1007/s00122-003-1204-5 NA NA t4072.T000052 flw4.2 6 Flowering QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG22b NA NA 0 0 NA 0 0 6.37 10.1007/s00122-003-1204-5 NA NA t4072.T000053 flw6.1 6 Flowering QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 CT179b NA NA 0 0 NA 0 0 3.88 10.1007/s00122-003-1204-5 NA NA t4072.T000054 flw8.1 6 Flowering QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG420P NA NA 0 0 NA 0 0 3.95 10.1007/s00122-003-1204-5 NA NA t4072.T000055 fno11.1 3 Fruit number QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG36 NA NA 0 0 NA 0 0 3.88 10.1007/s00122-003-1204-5 NA NA t4072.T000056 fno2.1 3 Fruit number QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 CD38 NA NA 0 0 NA 0 0 14.44 10.1007/s00122-003-1204-5 NA NA t4072.T000057 fno3.1 3 Fruit number QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG359 NA NA 0 0 NA 0 0 8.71 10.1007/s00122-003-1204-5 NA NA t4072.T000058 fs1.1 6 Fruit shape QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG19 NA NA 0 0 NA 0 0 4.25 10.1007/s00122-003-1204-5 NA NA t4072.T000059 fs10.1 6 Fruit shape QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2 CT124 NA NA 0 0 NA 0 0 4.54 10.1007/s00122-003-1204-5 NA NA t4072.T000060 fs11.1 6 Fruit shape QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG379 NA NA 0 0 NA 0 0 3.67 10.1007/s00122-003-1204-5 NA NA t4072.T000061 fs3.1 6 Fruit shape QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG130 NA NA 0 0 NA 0 0 14.63 10.1007/s00122-003-1204-5 NA NA t4072.T000062 fs4.1 6 Fruit shape QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG208 NA NA 0 0 NA 0 0 4.98 10.1007/s00122-003-1204-5 NA NA t4072.T000063 fw1.1 6 Fruit weight (g) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG44 NA NA 0 0 NA 0 0 7.32 10.1007/s00122-003-1204-5 NA NA t4072.T000064 fw10.1 6 Fruit weight (g) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2 CT57 NA NA 0 0 NA 0 0 5.83 10.1007/s00122-003-1204-5 NA NA t4072.T000065 fw11.1 6 Fruit weight (g) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG441 NA NA 0 0 NA 0 0 3.8 10.1007/s00122-003-1204-5 NA NA t4072.T000066 fw11.2 6 Fruit weight (g) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG105 NA NA 0 0 NA 0 0 4.75 10.1007/s00122-003-1204-5 NA NA t4072.T000067 fw2.1 6 Fruit weight (g) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 CD38 NA NA 0 0 NA 0 0 11.35 10.1007/s00122-003-1204-5 NA NA t4072.T000068 fw3.1 6 Fruit weight (g) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2 TG359 NA NA 0 0 NA 0 0 7.84 10.1007/s00122-003-1204-5 NA NA t4072.T000069 fw4.1 6 Fruit weight (g) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG22b NA NA 0 0 NA 0 0 5.74 10.1007/s00122-003-1204-5 NA NA t4072.T000070 fw8.1 6 Fruit weight (g) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2 CT28 NA NA 0 0 NA 0 0 5.57 10.1007/s00122-003-1204-5 NA NA t4072.T000071 mat1.1 6 Maturity QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG19 NA NA 0 0 NA 0 0 6.78 10.1007/s00122-003-1204-5 NA NA t4072.T000072 mat4.1 6 Maturity QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 CT253 NA NA 0 0 NA 0 0 6.79 10.1007/s00122-003-1204-5 NA NA t4072.T000073 mat5.1 6 Maturity QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG483 NA NA 0 0 NA 0 0 4.71 10.1007/s00122-003-1204-5 NA NA t4072.T000074 mat9.1 6 Maturity QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG263 NA NA 0 0 NA 0 0 3.84 10.1007/s00122-003-1204-5 NA NA t4072.T000075 perwd1.1 6 Pericarp width (mm) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG44 NA NA 0 0 NA 0 0 5.45 10.1007/s00122-003-1204-5 NA NA t4072.T000076 perwd11.1 6 Pericarp width (mm) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2 TG619 NA NA 0 0 NA 0 0 5.3 10.1007/s00122-003-1204-5 NA NA t4072.T000077 perwd2.1 6 Pericarp width (mm) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 CT176 NA NA 0 0 NA 0 0 3.81 10.1007/s00122-003-1204-5 NA NA t4072.T000078 perwd3.1 6 Pericarp width (mm) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG130 NA NA 0 0 NA 0 0 5.32 10.1007/s00122-003-1204-5 NA NA t4072.T000079 perwd3.2 6 Pericarp width (mm) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG359 NA NA 0 0 NA 0 0 7.1 10.1007/s00122-003-1204-5 NA NA t4072.T000080 perwd4.1 6 Pericarp width (mm) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG62 NA NA 0 0 NA 0 0 5.41 10.1007/s00122-003-1204-5 NA NA t4072.T000081 perwd6.1 6 Pericarp width (mm) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 CT184 NA NA 0 0 NA 0 0 3.85 10.1007/s00122-003-1204-5 NA NA t4072.T000082 perwd8.1 6 Pericarp width (mm) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 CT28 NA NA 0 0 NA 0 0 6.44 10.1007/s00122-003-1204-5 NA NA t4072.T000083 swt12.1 6 Seed weight (mg) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2 CD127d NA NA 0 0 NA 0 0 3.72 10.1007/s00122-003-1204-5 NA NA t4072.T000084 swt2.1 6 Seed weight (mg) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2 TG48 NA NA 0 0 NA 0 0 5.9 10.1007/s00122-003-1204-5 NA NA t4072.T000085 swt8.1 6 Seed weight (mg) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2 CT28 NA NA 0 0 NA 0 0 4.1 10.1007/s00122-003-1204-5 NA NA t4072.T000086 yld1.1 3 Yield (kg) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG19 NA NA 0 0 NA 0 0 5.03 10.1007/s00122-003-1204-5 NA NA t4072.T000087 yld8.1 3 Yield (kg) QTL analysis Capsicum annuum cv. Maor x Capsicum frutescens BG 2816 BC2S1 TG330 NA NA 0 0 NA 0 0 4.59 10.1007/s00122-003-1204-5 NA NA t4072.T000088 6 resistance to P. capsici root rot QTL analysis CM334 x Chilsungcho F2 CDI25 NA NA 0 0 CDI78 NA 0 0 10.48 10.1007/s00122-008-0873-5 NA NA t4072.T000089 6 resistance to P. capsici root rot QTL analysis CM334 x Chilsungcho F2 W51 NA NA 0 0 W52 NA 0 0 2.03 10.1007/s00122-008-0873-5 NA NA t4072.T000090 6 resistance to P. capsici damping off QTL analysis CM334 x Chilsungcho F2 W50 NA NA 0 0 B804 NA 0 0 2.87 10.1007/s00122-008-0873-5 NA NA t4072.T000091 6 resistance to P. capsici root rot QTL analysis CM334 x Chilsungcho F2 CT211A NA NA 0 0 CDI128 NA 0 0 2.87 10.1007/s00122-008-0873-5 NA NA t4072.T000092 Pep1 1 PepMoV resistance, closely linked with Ptel1 QTL (major QTL for trichome in F2 stem) QTL analysis CM334 x Chilsungcho F2:3 TG420 NA NA 0 0 NA 0 0 27.2 10.1007/s00122-010-1510-7 NA NA t4072.T000093 Pep2 1 PepMoV resistance QTL analysis CM334 x Chilsungcho F2:3 EAMC91 NA NA 0 0 NA 0 0 19.2 10.1007/s00122-010-1510-7 NA NA t4072.T000094 Ptel1 4 Trichome in F3 stem QTL analysis CM334 x Chilsungcho F2:3 HpmsE031 V2.0 Chr10 204004861 204005031 NA 0 0 29.24 10.1007/s00122-010-1510-7 t4072.M005785.1 NA t4072.T000095 Ptel1 6 Trichome in F2 stem, closely linked with Pep1 QTL (major QTL for PepMoV resistance) QTL analysis CM334 x Chilsungcho F2 HpmsE031 V2.0 Chr10 204004861 204005031 NA 0 0 39.83 10.1007/s00122-010-1510-7 t4072.M005785.1 NA t4072.T000096 Ptel10 4 Trichome in F3 calyx QTL analysis CM334 x Chilsungcho F2:3 EAMC167 NA NA 0 0 NA 0 0 2.44 10.1007/s00122-010-1510-7 NA NA t4072.T000097 Ptel11 4 Trichome in F3 calyx QTL analysis CM334 x Chilsungcho F2:3 EAMG47 NA NA 0 0 NA 0 0 2.8 10.1007/s00122-010-1510-7 NA NA t4072.T000098 Ptel2 4 Trichome in F2 calyx QTL analysis CM334 x Chilsungcho F2 m104 NA NA 0 0 NA 0 0 12.38 10.1007/s00122-010-1510-7 NA NA t4072.T000099 Ptel3 4 Trichome in F2 calyx QTL analysis CM334 x Chilsungcho F2 w53 NA NA 0 0 NA 0 0 3.45 10.1007/s00122-010-1510-7 NA NA t4072.T000100 Ptel4 4 Trichome in F2 calyx QTL analysis CM334 x Chilsungcho F2 m96 NA NA 0 0 NA 0 0 2.68 10.1007/s00122-010-1510-7 NA NA t4072.T000101 Ptel5 4 Trichome in F2 calyx QTL analysis CM334 x Chilsungcho F2 EAMG66 NA NA 0 0 NA 0 0 3.1 10.1007/s00122-010-1510-7 NA NA t4072.T000102 Ptel6 4 Trichome in F2 calyx QTL analysis CM334 x Chilsungcho F2 CAN15 NA NA 0 0 NA 0 0 2.55 10.1007/s00122-010-1510-7 NA NA t4072.T000103 Ptel7 4 Trichome in F3 calyx QTL analysis CM334 x Chilsungcho F2:3 EAMG74 NA NA 0 0 NA 0 0 3.45 10.1007/s00122-010-1510-7 NA NA t4072.T000104 Ptel8 4 Trichome in F3 calyx QTL analysis CM334 x Chilsungcho F2:3 EAMC192 NA NA 0 0 NA 0 0 2.48 10.1007/s00122-010-1510-7 NA NA t4072.T000105 Ptel9 4 Trichome in F3 calyx QTL analysis CM334 x Chilsungcho F2:3 m74 NA NA 0 0 NA 0 0 3.12 10.1007/s00122-010-1510-7 NA NA t4072.T000106 4 additive effects for Fruit shape QTL analysis Early Jalapeno x CM334 RIL CAPS_CONTIG.816 NA NA 0 0 NA 0 0 124 1.98 10.1094/PHYTO-05-13-0143-R NA NA t4072.T000107 6 additive effects for fruit rot resistance 12889 3 dpi, additive effect for fruit rot resistance to P. capsici isolate 12889 3 days postinoculation QTL analysis Early Jalapeno x CM334 RIL CAPS_CONTIG.10457 NA NA 0 0 NA 0 0 13 3.33 10.1094/PHYTO-05-13-0143-R NA NA t4072.T000108 6 additive effects for fruit rot resistance 13709 5 dpi, additive effect for fruit rot resistance to P. capsici isolate 13709 5 days postinoculation QTL analysis Early Jalapeno x CM334 RIL KS24039C09 NA NA 0 0 NA 0 0 124 4.4 10.1094/PHYTO-05-13-0143-R NA NA t4072.T000109 6 additive effects for fruit rot resistance OP97 5 dpi, additive effect for fruit rot resistance to P. capsici isolate OP97 5 days postinoculation QTL analysis Early Jalapeno x CM334 RIL CAPS_CONTIG.9283 NA NA 0 0 NA 0 0 13 9.53 10.1094/PHYTO-05-13-0143-R NA NA t4072.T000110 6 additive effects for fruit rot resistance 13709 5 dpi, additive effect for fruit rot resistance to P. capsici isolate 13709 5 days postinoculation QTL analysis Early Jalapeno x CM334 RIL CAPS_CONTIG.11780 NA NA 0 0 NA 0 0 71.2 7.49 10.1094/PHYTO-05-13-0143-R NA NA t4072.T000111 6 additive effects for fruit rot resistance 12889 3 dpi, additive effect for fruit rot resistance to P. capsici isolate 12889 3 days postinoculation QTL analysis Early Jalapeno x CM334 RIL CAPS_CONTIG.3200 NA NA 0 0 NA 0 0 58.1 6.66 10.1094/PHYTO-05-13-0143-R NA NA t4072.T000112 4 additive effects for Fruit shape QTL analysis Early Jalapeno x CM334 RIL KS26009E11 NA NA 0 0 NA 0 0 2.2 1.79 10.1094/PHYTO-05-13-0143-R NA NA t4072.T000113 5 additive effects for fruit Firmness QTL analysis Early Jalapeno x CM334 RIL KS21041M02 NA NA 0 0 NA 0 0 55.4 4.486 10.1094/PHYTO-05-13-0143-R NA NA t4072.T000114 4 Fruit shape QTL analysis Maor x BG 2816 BC2S1 TG130 NA NA 0 0 NA 0 0 14.1 10.1139/g02-096 NA NA t4072.T000115 4 Fruit shape QTL analysis Maor x Perennial F2:3 P14/M59-276 NA NA 0 0 NA 0 0 41.8 10.1139/g02-096 NA NA t4072.T000116 4 flowering time QTL analysis PI 527325 (USDA-early) x PI 511887 (USDA-late) F2,BC2F2 CaAP2 NA NA 0 0 NA 0 0 18 10.1007/s00122-015-2491-3 NA NA t4072.T000117 Axl9.1 3 Axis length QTL analysis Subpopulation A RIL e37/m54_92c NA NA 0 0 NA 0 0 13.7 3.43 10.1007/s00122-009-0970-0 NA NA t4072.T000118 Axs9.1 3 Axis growth speed QTL analysis Subpopulation A RIL CT145 NA NA 0 0 NA 0 0 8.8 3.66 10.1007/s00122-009-0970-0 NA NA t4072.T000119 Flw1.1 6 Flowering earliness QTL analysis Subpopulation A RIL e34/M53_233c NA NA 0 0 NA 0 0 7.4 5.42 10.1007/s00122-009-0970-0 NA NA t4072.T000120 FlwLG15.1 6 Flowering earliness QTL analysis Subpopulation A RIL e38/m60_224y NA NA 0 0 NA 0 0 0 5.61 10.1007/s00122-009-0970-0 NA NA t4072.T000121 Frd11.1 6 Fruit diameter QTL analysis Subpopulation A RIL e41/m61_137c NA NA 0 0 NA 0 0 49.6 5.96 10.1007/s00122-009-0970-0 NA NA t4072.T000122 FrdLG15.1 6 Fruit diameter QTL analysis Subpopulation A RIL e38/m60_224y NA NA 0 0 NA 0 0 0 4.55 10.1007/s00122-009-0970-0 NA NA t4072.T000123 FrdLG17.1 6 Fruit diameter QTL analysis Subpopulation A RIL P14/m33_851c NA NA 0 0 NA 0 0 18.2 4.55 10.1007/s00122-009-0970-0 NA NA t4072.T000124 FrdLG24.1 6 Fruit diameter QTL analysis Subpopulation A RIL P11/m49_197y NA NA 0 0 NA 0 0 18.7 3.86 10.1007/s00122-009-0970-0 NA NA t4072.T000125 Frl4.1 6 Fruit length QTL analysis Subpopulation A RIL e38/m60_109y NA NA 0 0 NA 0 0 63.4 3.86 10.1007/s00122-009-0970-0 NA NA t4072.T000126 FrlLG22.1 6 Fruit length QTL analysis Subpopulation A RIL P17/m32_155c NA NA 0 0 NA 0 0 6.1 3.86 10.1007/s00122-009-0970-0 NA NA t4072.T000127 Frs11.1 6 Fruit shape QTL analysis Subpopulation A RIL e41/m61_270c NA NA 0 0 NA 0 0 52.8 3.3 10.1007/s00122-009-0970-0 NA NA t4072.T000128 Frs3.1 6 Fruit shape QTL analysis Subpopulation A RIL E34/m53_077c NA NA 0 0 NA 0 0 65.7 4.1 10.1007/s00122-009-0970-0 NA NA t4072.T000129 FrsLG17.1 6 Fruit shape QTL analysis Subpopulation A RIL e40/m47_239y NA NA 0 0 NA 0 0 9.1 3.37 10.1007/s00122-009-0970-0 NA NA t4072.T000130 Int9.1 6 Internode growth time QTL analysis Subpopulation A RIL E44/m61_515c NA NA 0 0 NA 0 0 4.06 10.1007/s00122-009-0970-0 NA NA t4072.T000131 Lfw3.1 6 Logarithm of fruit weight QTL analysis Subpopulation A RIL P14/m39_221y NA NA 0 0 NA 0 0 130.5 5.14 10.1007/s00122-009-0970-0 NA NA t4072.T000132 Lfw4.1 6 Logarithm of fruit weight QTL analysis Subpopulation A RIL p17/m32_240c NA NA 0 0 NA 0 0 80.9 4.56 10.1007/s00122-009-0970-0 NA NA t4072.T000133 LfwLG24.1 6 Logarithm of fruit weight QTL analysis Subpopulation A RIL EPMS_376 NA NA 0 0 NA 0 0 13.6 3.57 10.1007/s00122-009-0970-0 NA NA t4072.T000134 Nle11.1 3 Number of leaves QTL analysis Subpopulation A RIL EPMS_410 NA NA 0 0 NA 0 0 60.7 3.2 10.1007/s00122-009-0970-0 NA NA t4072.T000135 NloLG17.1 3 Number of loges QTL analysis Subpopulation A RIL e38/m61_144y NA NA 0 0 NA 0 0 0 3.86 10.1007/s00122-009-0970-0 NA NA t4072.T000136 NloLG25.1 3 Number of loges QTL analysis Subpopulation A RIL p15/m40_091c NA NA 0 0 NA 0 0 22.1 8.42 10.1007/s00122-009-0970-0 NA NA t4072.T000137 Pel2.1 3 Pedicel length QTL analysis Subpopulation A RIL e36/m52_116c NA NA 0 0 NA 0 0 70.2 4.4 10.1007/s00122-009-0970-0 NA NA t4072.T000138 Pel4.1 3 Pedicel length QTL analysis Subpopulation A RIL P17/m32_240c NA NA 0 0 NA 0 0 80.9 3.18 10.1007/s00122-009-0970-0 NA NA t4072.T000139 Pel4.2 3 Pedicel length QTL analysis Subpopulation A RIL E42/m48_116hy NA NA 0 0 NA 0 0 3.32 10.1007/s00122-009-0970-0 NA NA t4072.T000140 Pet10.1 6 Pericarp thickness QTL analysis Subpopulation A RIL e36/m47_145y NA NA 0 0 NA 0 0 28.9 5.42 10.1007/s00122-009-0970-0 NA NA t4072.T000141 Pet3.1 6 Pericarp thickness QTL analysis Subpopulation A RIL PG101 NA NA 0 0 NA 0 0 95.7 3.33 10.1007/s00122-009-0970-0 NA NA t4072.T000142 PetLG15.1 6 Pericarp thickness QTL analysis Subpopulation A RIL e38/m60_224y NA NA 0 0 NA 0 0 0 3.44 10.1007/s00122-009-0970-0 NA NA t4072.T000143 Axs2.1 3 Axis growth speed QTL analysis Subpopulation B RIL EPMS_497 NA NA 0 0 NA 0 0 101.5 3.22 10.1007/s00122-009-0970-0 NA NA t4072.T000144 Axs2.2 3 Axis growth speed QTL analysis Subpopulation B RIL P15/m43_153 NA NA 0 0 NA 0 0 3.95 10.1007/s00122-009-0970-0 NA NA t4072.T000145 Flw1.1 6 Flowering earliness QTL analysis Subpopulation B RIL TntC09y NA NA 0 0 NA 0 0 0 4.31 10.1007/s00122-009-0970-0 NA NA t4072.T000146 FlwLG15.1 6 Flowering earliness QTL analysis Subpopulation B RIL e38/m60_224y NA NA 0 0 NA 0 0 0 3.6 10.1007/s00122-009-0970-0 NA NA t4072.T000147 FlwLG24.1 6 Flowering earliness QTL analysis Subpopulation B RIL E41/m54_184y NA NA 0 0 NA 0 0 0 3.88 10.1007/s00122-009-0970-0 NA NA t4072.T000148 Frd1.1 6 Fruit diameter QTL analysis Subpopulation B RIL E38/m60_221y NA NA 0 0 NA 0 0 64.6 4.13 10.1007/s00122-009-0970-0 NA NA t4072.T000149 Frd11.1 6 Fruit diameter QTL analysis Subpopulation B RIL e41/m61_137c NA NA 0 0 NA 0 0 49.6 6.72 10.1007/s00122-009-0970-0 NA NA t4072.T000150 Frd4.1 6 Fruit diameter QTL analysis Subpopulation B RIL E38/m60_109y NA NA 0 0 NA 0 0 63.4 5.74 10.1007/s00122-009-0970-0 NA NA t4072.T000151 Frl4.1 6 Fruit length QTL analysis Subpopulation B RIL P17/m32_240c NA NA 0 0 NA 0 0 80.9 7.16 10.1007/s00122-009-0970-0 NA NA t4072.T000152 Inl1.1 6 Internode length QTL analysis Subpopulation B RIL C33/m54_327y NA NA 0 0 NA 0 0 51 4.99 10.1007/s00122-009-0970-0 NA NA t4072.T000153 Inl2.1 6 Internode length QTL analysis Subpopulation B RIL Ee44/m51_258c NA NA 0 0 NA 0 0 3.28 10.1007/s00122-009-0970-0 NA NA t4072.T000154 Lfw4.1 6 Logarithm of fruit weight QTL analysis Subpopulation B RIL P14/m41_648c NA NA 0 0 NA 0 0 85.3 4.74 10.1007/s00122-009-0970-0 NA NA t4072.T000155 LfwLG24.1 6 Logarithm of fruit weight QTL analysis Subpopulation B RIL EPMS_376 NA NA 0 0 NA 0 0 13.6 3.27 10.1007/s00122-009-0970-0 NA NA t4072.T000156 Pel12.1 3 Pedicel length QTL analysis Subpopulation B RIL E36/m47_237c NA NA 0 0 NA 0 0 62 3.51 10.1007/s00122-009-0970-0 NA NA t4072.T000157 Pet10.1 6 Pericarp thickness QTL analysis Subpopulation B RIL E38/m60_117c NA NA 0 0 NA 0 0 50.2 3.3 10.1007/s00122-009-0970-0 NA NA t4072.T000158 qFCC-12-1 4 FCC, Fruit Cross-sectional Corrugation QTL analysis YCM334 x Taean RIL a017_1 NA NA 0 0 a057_2 NA 0 0 57.1 2.891 10.1007/s10059-012-0018-1 NA NA t4072.T000159 qFL-4-1 4 FL, Fruit Length QTL analysis YCM334 x Taean RIL ca04602 NA NA 0 0 a130_2 NA 0 0 90.6 4.1049 10.1007/s10059-012-0018-1 NA NA t4072.T000160 qFW-10-1 4 FW, Fruit Width QTL analysis YCM334 x Taean RIL cs19002 NA NA 0 0 CA00986b Chr10 198978531 198978592 174.3 3.2406 10.1007/s10059-012-0018-1 NA t4072.M005799.1 t4072.T000161 qFW-d-1 4 FW, Fruit Width QTL analysis YCM334 x Taean RIL a078_1 NA NA 0 0 a100_6 NA 0 0 7.2 4.1439 10.1007/s10059-012-0018-1 NA NA t4072.T000162 qFWT-2-1 4 FWT, Fruit Wall Thickness QTL analysis YCM334 x Taean RIL ca13319 NA NA 0 0 ca12098a NA 0 0 48.4 2.6845 10.1007/s10059-012-0018-1 NA NA t4072.T000163 qFWT-3-1 4 FWT, Fruit Wall Thickness QTL analysis YCM334 x Taean RIL a015_6 NA NA 0 0 cs26051 NA 0 0 85.5 2.8688 10.1007/s10059-012-0018-1 NA NA t4072.T000164 qLL-12-1 4 LL, Leaf Length QTL analysis YCM334 x Taean RIL a100_5 NA NA 0 0 a152_5 NA 0 0 33.2 3.3898 10.1007/s10059-012-0018-1 NA NA t4072.T000165 qLL-3-1 4 LL, Leaf Length QTL analysis YCM334 x Taean RIL a154_2 NA NA 0 0 a170_5 NA 0 0 35.4 4.1274 10.1007/s10059-012-0018-1 NA NA t4072.T000166 qLL-8-1 4 LL, Leaf Length QTL analysis YCM334 x Taean RIL a171_1 NA NA 0 0 a114_1 NA 0 0 71.2 3.4618 10.1007/s10059-012-0018-1 NA NA t4072.T000167 qLW-12-1 6 LW, Leaf Width QTL analysis YCM334 x Taean RIL a100_5 NA NA 0 0 a152_5 NA 0 0 33.2 5.1596 10.1007/s10059-012-0018-1 NA NA t4072.T000168 qLW-2-1 6 LW, Leaf Width QTL analysis YCM334 x Taean RIL cs26050 NA NA 0 0 a086_3 NA 0 0 8.9 4.3136 10.1007/s10059-012-0018-1 NA NA t4072.T000169 qLW-6-1 6 LW, Leaf Width QTL analysis YCM334 x Taean RIL ca523558 NA NA 0 0 CA00025 Chr06 8615438 8615606 102.5 4.0416 10.1007/s10059-012-0018-1 NA t4072.M005797.1 t4072.T000170 qMFW-3-1 5 MFW, Mean Fruit Weight QTL analysis YCM334 x Taean RIL ca03461 NA NA 0 0 a112_3 NA 0 0 75.5 2.8755 10.1007/s10059-012-0018-1 NA NA t4072.T000171 qMFW-4-1 5 MFW, Mean Fruit Weight QTL analysis YCM334 x Taean RIL a130_2 NA NA 0 0 a083_6 NA 0 0 94.6 4.518 10.1007/s10059-012-0018-1 NA NA t4072.T000172 qMFW-4-2 5 MFW, Mean Fruit Weight QTL analysis YCM334 x Taean RIL a113_6 NA NA 0 0 a073_1 NA 0 0 169.3 3.0995 10.1007/s10059-012-0018-1 NA NA t4072.T000173 qPcH-4-1 6 PcH, P. capsici resistance at high-level infection QTL analysis YCM334 x Taean RIL CA02327b V2.0 Chr04 58971098 58971197 asu2 NA 0 0 63.6 4.6318 10.1007/s10059-012-0018-1 t4072.M005798.1 NA t4072.T000174 qPcH-5-1 6 PcH, P. capsici resistance at high-level infection QTL analysis YCM334 x Taean RIL a035_1 NA NA 0 0 a170_1 NA 0 0 88.1 31.4572 10.1007/s10059-012-0018-1 NA NA t4072.T000175 qPcH-d-1 6 PcH, P. capsici resistance at high-level infection QTL analysis YCM334 x Taean RIL a078_1 NA NA 0 0 a100_6 NA 0 0 6.7 4.8461 10.1007/s10059-012-0018-1 NA NA t4072.T000176 qPcL-5-1 6 PcL, P. capsici resistance at low-level infection QTL analysis YCM334 x Taean RIL a035_1 NA NA 0 0 a170_1 NA 0 0 86.6 31.9698 10.1007/s10059-012-0018-1 NA NA t4072.T000177 qPcM-5-1 6 PcM, P. capsici resistance at mediate-level infection QTL analysis YCM334 x Taean RIL a035_1 NA NA 0 0 a170_1 NA 0 0 88.1 31.4572 10.1007/s10059-012-0018-1 NA NA t4072.T000178 qPcM-d-1 6 PcM, P. capsici resistance at mediate-level infection QTL analysis YCM334 x Taean RIL a078_1 NA NA 0 0 a100_6 NA 0 0 8.7 4.3947 10.1007/s10059-012-0018-1 NA NA t4072.T000179 qSD-4-1 4 SD, Stem Diameter QTL analysis YCM334 x Taean RIL a154_7 NA NA 0 0 a134_3 NA 0 0 86.8 3.5348 10.1007/s10059-012-0018-1 NA NA t4072.T000180 qSD-5-1 4 SD, Stem Diameter QTL analysis YCM334 x Taean RIL CA524065 NA NA 0 0 a151_5 NA 0 0 157 3.6104 10.1007/s10059-012-0018-1 NA NA t4072.T000181 Axl2.1 3 Axis length QTL analysis YW x CM334 RIL e36/m47_146c NA NA 0 0 NA 0 0 83.4 4.65 10.1007/s00122-009-0970-0 NA NA t4072.T000182 Axl6.1 3 Axis length QTL analysis YW x CM334 RIL p14/m41_060y NA NA 0 0 NA 0 0 62.5 3.29 10.1007/s00122-009-0970-0 NA NA t4072.T000183 Axl9.1 3 Axis length QTL analysis YW x CM334 RIL e37/m54_92c NA NA 0 0 NA 0 0 13.7 3.83 10.1007/s00122-009-0970-0 NA NA t4072.T000184 AxlLG24.1 3 Axis length QTL analysis YW x CM334 RIL Epms376 V2.0 Chr06 37364154 37364410 NA 0 0 13.6 3.53 10.1007/s00122-009-0970-0 t4072.M011853.1 NA t4072.T000185 AxlLG47.1 3 Axis length QTL analysis YW x CM334 RIL p14/m33_311c NA NA 0 0 NA 0 0 0 6.15 10.1007/s00122-009-0970-0 NA NA t4072.T000186 Axs2.1 3 Axis growth speed QTL analysis YW x CM334 RIL e36/m47_146c NA NA 0 0 NA 0 0 83.4 6.27 10.1007/s00122-009-0970-0 NA NA t4072.T000187 Axs2.2 3 Axis growth speed QTL analysis YW x CM334 RIL p25/m42_268c NA NA 0 0 NA 0 0 17.8 3.69 10.1007/s00122-009-0970-0 NA NA t4072.T000188 Axs4.1 3 Axis growth speed QTL analysis YW x CM334 RIL e38/m61_168c NA NA 0 0 NA 0 0 156.3 4.48 10.1007/s00122-009-0970-0 NA NA t4072.T000189 Axs9.1 3 Axis growth speed QTL analysis YW x CM334 RIL CT145 NA NA 0 0 NA 0 0 8.8 4.46 10.1007/s00122-009-0970-0 NA NA t4072.T000190 Flw1.1 6 Flowering earliness QTL analysis YW x CM334 RIL e34/M53_233c NA NA 0 0 NA 0 0 7.4 8.04 10.1007/s00122-009-0970-0 NA NA t4072.T000191 Flw2.1 6 Flowering earliness QTL analysis YW x CM334 RIL Epms409 NA NA 0 0 NA 0 0 53.6 6.64 10.1007/s00122-009-0970-0 t4072.M011867.1 NA t4072.T000192 Flw4.1 6 Flowering earliness QTL analysis YW x CM334 RIL e38/m61_168c NA NA 0 0 NA 0 0 156.3 3.34 10.1007/s00122-009-0970-0 NA NA t4072.T000193 FlwLG15.1 6 Flowering earliness QTL analysis YW x CM334 RIL e38/m60_224y NA NA 0 0 NA 0 0 0 4.83 10.1007/s00122-009-0970-0 NA NA t4072.T000194 FlwLG17.1 6 Flowering earliness QTL analysis YW x CM334 RIL p14/m33_851c NA NA 0 0 NA 0 0 18.2 4.19 10.1007/s00122-009-0970-0 NA NA t4072.T000195 Frd10.1 6 Fruit diameter QTL analysis YW x CM334 RIL e36/m47_145y NA NA 0 0 NA 0 0 28.9 3.32 10.1007/s00122-009-0970-0 NA NA t4072.T000196 Frd11.1 6 Fruit diameter QTL analysis YW x CM334 RIL e41/m61_137c NA NA 0 0 NA 0 0 49.6 11.27 10.1007/s00122-009-0970-0 NA NA t4072.T000197 Frd12.1 6 Fruit diameter QTL analysis YW x CM334 RIL e44/m51_263c NA NA 0 0 NA 0 0 30.9 3.43 10.1007/s00122-009-0970-0 NA NA t4072.T000198 Frd2.1 6 Fruit diameter QTL analysis YW x CM334 RIL e36/m52_116c NA NA 0 0 NA 0 0 70.2 4.73 10.1007/s00122-009-0970-0 NA NA t4072.T000199 Frd3.1 6 Fruit diameter QTL analysis YW x CM334 RIL p14/m39_221y NA NA 0 0 NA 0 0 130.5 3.72 10.1007/s00122-009-0970-0 NA NA t4072.T000200 Frd4.1 6 Fruit diameter QTL analysis YW x CM334 RIL e41/m48_078y NA NA 0 0 NA 0 0 70.1 4.63 10.1007/s00122-009-0970-0 NA NA t4072.T000201 Frd8.1 6 Fruit diameter QTL analysis YW x CM334 RIL p11/m49_274c NA NA 0 0 NA 0 0 35.2 3.23 10.1007/s00122-009-0970-0 NA NA t4072.T000202 FrdLG15.1 6 Fruit diameter QTL analysis YW x CM334 RIL e38/m60_224y NA NA 0 0 NA 0 0 0 7.64 10.1007/s00122-009-0970-0 NA NA t4072.T000203 FrdLG17.1 6 Fruit diameter QTL analysis YW x CM334 RIL e38/m61_144y NA NA 0 0 NA 0 0 0 4.74 10.1007/s00122-009-0970-0 NA NA t4072.T000204 FrdLG24.1 6 Fruit diameter QTL analysis YW x CM334 RIL e41/m54_184y NA NA 0 0 NA 0 0 0 4.57 10.1007/s00122-009-0970-0 NA NA t4072.T000205 FrdLG25.1 6 Fruit diameter QTL analysis YW x CM334 RIL p15/m40_091c NA NA 0 0 NA 0 0 22.1 6.09 10.1007/s00122-009-0970-0 NA NA t4072.T000206 FrdLG37.1 6 Fruit diameter QTL analysis YW x CM334 RIL p15/m40_319c NA NA 0 0 NA 0 0 0 3.94 10.1007/s00122-009-0970-0 NA NA t4072.T000207 Frl3.1 6 Fruit length QTL analysis YW x CM334 RIL e36/m52_158y NA NA 0 0 NA 0 0 31.5 7.26 10.1007/s00122-009-0970-0 NA NA t4072.T000208 Frl4.1 6 Fruit length QTL analysis YW x CM334 RIL e38/m60_109y NA NA 0 0 NA 0 0 63.4 17.16 10.1007/s00122-009-0970-0 NA NA t4072.T000209 Frl7.1 6 Fruit length QTL analysis YW x CM334 RIL e41/m61_140c NA NA 0 0 NA 0 0 54.4 5.53 10.1007/s00122-009-0970-0 NA NA t4072.T000210 FrlLG22.1 6 Fruit length QTL analysis YW x CM334 RIL e34/m53_181c NA NA 0 0 NA 0 0 0 5.99 10.1007/s00122-009-0970-0 NA NA t4072.T000211 Frs10.1 6 Fruit shape QTL analysis YW x CM334 RIL e38/m60_117c NA NA 0 0 NA 0 0 50.2 4.68 10.1007/s00122-009-0970-0 NA NA t4072.T000212 Frs11.1 6 Fruit shape QTL analysis YW x CM334 RIL e41/m61_270c NA NA 0 0 NA 0 0 52.8 4.41 10.1007/s00122-009-0970-0 NA NA t4072.T000213 Frs2.1 6 Fruit shape QTL analysis YW x CM334 RIL e36/m52_116c NA NA 0 0 NA 0 0 70.2 3.24 10.1007/s00122-009-0970-0 NA NA t4072.T000214 Frs3.1 6 Fruit shape QTL analysis YW x CM334 RIL e43/m54_256y NA NA 0 0 NA 0 0 32.4 11.75 10.1007/s00122-009-0970-0 NA NA t4072.T000215 Frs4.1 6 Fruit shape QTL analysis YW x CM334 RIL p14/m39_417y NA NA 0 0 NA 0 0 42.4 4.01 10.1007/s00122-009-0970-0 NA NA t4072.T000216 Frs4.2 6 Fruit shape QTL analysis YW x CM334 RIL p25/m45_109y NA NA 0 0 NA 0 0 111.8 3.83 10.1007/s00122-009-0970-0 NA NA t4072.T000217 FrsLG17.1 6 Fruit shape QTL analysis YW x CM334 RIL e40/m47_239y NA NA 0 0 NA 0 0 9.1 5.21 10.1007/s00122-009-0970-0 NA NA t4072.T000218 FrsLG25.1 6 Fruit shape QTL analysis YW x CM334 RIL e41/m54_351c NA NA 0 0 NA 0 0 26.4 3.79 10.1007/s00122-009-0970-0 NA NA t4072.T000219 Inl1.1 6 Internode length QTL analysis YW x CM334 RIL e36/m52_190y NA NA 0 0 NA 0 0 22.8 4.22 10.1007/s00122-009-0970-0 NA NA t4072.T000220 Inl2.1 6 Internode length QTL analysis YW x CM334 RIL e36/m47_146c NA NA 0 0 NA 0 0 83.4 6.25 10.1007/s00122-009-0970-0 NA NA t4072.T000221 InlLG28.1 6 Internode length QTL analysis YW x CM334 RIL e41/m54_221c NA NA 0 0 NA 0 0 0 5.1 10.1007/s00122-009-0970-0 NA NA t4072.T000222 Int4.1 6 Internode growth time QTL analysis YW x CM334 RIL e42/M48_116y NA NA 0 0 NA 0 0 170.4 3.47 10.1007/s00122-009-0970-0 NA NA t4072.T000223 IntLG47.1 6 Internode growth time QTL analysis YW x CM334 RIL p14/m33_311c NA NA 0 0 NA 0 0 0 4.86 10.1007/s00122-009-0970-0 NA NA t4072.T000224 Lfw11.1 6 Logarithm of fruit weight QTL analysis YW x CM334 RIL e41/m61_137c NA NA 0 0 NA 0 0 49.6 4.61 10.1007/s00122-009-0970-0 NA NA t4072.T000225 Lfw12.1 6 Logarithm of fruit weight QTL analysis YW x CM334 RIL e44/m51_263c NA NA 0 0 NA 0 0 30.9 4.22 10.1007/s00122-009-0970-0 NA NA t4072.T000226 Lfw3.1 6 Logarithm of fruit weight QTL analysis YW x CM334 RIL e40/m49_198y NA NA 0 0 NA 0 0 160.7 5.14 10.1007/s00122-009-0970-0 NA NA t4072.T000227 Lfw4.1 6 Logarithm of fruit weight QTL analysis YW x CM334 RIL p17/m32_240c NA NA 0 0 NA 0 0 80.9 9.63 10.1007/s00122-009-0970-0 NA NA t4072.T000228 LfwLG15.1 6 Logarithm of fruit weight QTL analysis YW x CM334 RIL e38/m60_224y NA NA 0 0 NA 0 0 0 5.03 10.1007/s00122-009-0970-0 NA NA t4072.T000229 LfwLG24.1 6 Logarithm of fruit weight QTL analysis YW x CM334 RIL e41/m54_184y NA NA 0 0 NA 0 0 0 4.49 10.1007/s00122-009-0970-0 NA NA t4072.T000230 LfwLG45.1 6 Logarithm of fruit weight QTL analysis YW x CM334 RIL Epms_402 NA NA 0 0 NA 0 0 9.5 4.01 10.1007/s00122-009-0970-0 NA NA t4072.T000231 Nle3.1 3 Number of leaves QTL analysis YW x CM334 RIL e40/m49_198y NA NA 0 0 NA 0 0 160.7 3.29 10.1007/s00122-009-0970-0 NA NA t4072.T000232 NleLG38.1 3 Number of leaves QTL analysis YW x CM334 RIL p17/m32_344c NA NA 0 0 NA 0 0 0 3.3 10.1007/s00122-009-0970-0 NA NA t4072.T000233 NleLG45.1 3 Number of leaves QTL analysis YW x CM334 RIL Epms_402 NA NA 0 0 NA 0 0 9.5 3.08 10.1007/s00122-009-0970-0 NA NA t4072.T000234 NleLG47.1 3 Number of leaves QTL analysis YW x CM334 RIL p14/m33_311c NA NA 0 0 NA 0 0 0 6.31 10.1007/s00122-009-0970-0 NA NA t4072.T000235 Nlo12.1 6 Number of locules QTL analysis YW x CM334 RIL e44/m51_263c NA NA 0 0 NA 0 0 30.9 4.08 10.1007/s00122-009-0970-0 NA NA t4072.T000236 Nlo12.2 6 Number of locules QTL analysis YW x CM334 RIL e36/m47_237c NA NA 0 0 NA 0 0 62 4.88 10.1007/s00122-009-0970-0 NA NA t4072.T000237 Nlo2.1 6 Number of locules QTL analysis YW x CM334 RIL e36/m47_146c NA NA 0 0 NA 0 0 83.4 3.42 10.1007/s00122-009-0970-0 NA NA t4072.T000238 Nlo8.1 6 Number of locules QTL analysis YW x CM334 RIL Hpms1_214 NA NA 0 0 NA 0 0 86.7 3.83 10.1007/s00122-009-0970-0 NA NA t4072.T000239 NloLG17.1 6 Number of locules QTL analysis YW x CM334 RIL e38/m61_144y NA NA 0 0 NA 0 0 0 4.06 10.1007/s00122-009-0970-0 NA NA t4072.T000240 NloLG22.1 6 Number of locules QTL analysis YW x CM334 RIL e34/m53_181c NA NA 0 0 NA 0 0 0 3.13 10.1007/s00122-009-0970-0 NA NA t4072.T000241 NloLG25.1 6 Number of locules QTL analysis YW x CM334 RIL p15/m40_091c NA NA 0 0 NA 0 0 22.1 8.12 10.1007/s00122-009-0970-0 NA NA t4072.T000242 NloLG30.1 6 Number of locules QTL analysis YW x CM334 RIL e44/m51_376c NA NA 0 0 NA 0 0 1.6 8.12 10.1007/s00122-009-0970-0 NA NA t4072.T000243 NloLG39.1 6 Number of locules QTL analysis YW x CM334 RIL TntC07y NA NA 0 0 NA 0 0 9.4 5.72 10.1007/s00122-009-0970-0 NA NA t4072.T000244 Pel1.1 3 Pedicel length QTL analysis YW x CM334 RIL e41/m61_199y NA NA 0 0 NA 0 0 62.9 3.48 10.1007/s00122-009-0970-0 NA NA t4072.T000245 Pel12.1 3 Pedicel length QTL analysis YW x CM334 RIL p25/m45_087c NA NA 0 0 NA 0 0 54.9 7.2 10.1007/s00122-009-0970-0 NA NA t4072.T000246 Pel2.1 3 Pedicel length QTL analysis YW x CM334 RIL e36/m52_116c NA NA 0 0 NA 0 0 70.2 9.04 10.1007/s00122-009-0970-0 NA NA t4072.T000247 Pel3.1 3 Pedicel length QTL analysis YW x CM334 RIL e34/m53_077c NA NA 0 0 NA 0 0 65.7 5.48 10.1007/s00122-009-0970-0 NA NA t4072.T000248 Pel4.1 3 Pedicel length QTL analysis YW x CM334 RIL e41/m48_078y NA NA 0 0 NA 0 0 70.1 5.68 10.1007/s00122-009-0970-0 NA NA t4072.T000249 PelLG42.1 3 Pedicel length QTL analysis YW x CM334 RIL p25/m45_335c NA NA 0 0 NA 0 0 0 6.14 10.1007/s00122-009-0970-0 NA NA t4072.T000250 Pet10.1 6 Pericarp thickness QTL analysis YW x CM334 RIL e36/m47_145y NA NA 0 0 NA 0 0 28.9 6.87 10.1007/s00122-009-0970-0 NA NA t4072.T000251 Pet11.1 6 Pericarp thickness QTL analysis YW x CM334 RIL e41/m61_270c NA NA 0 0 NA 0 0 52.8 3.69 10.1007/s00122-009-0970-0 NA NA t4072.T000252 Pet12.1 6 Pericarp thickness QTL analysis YW x CM334 RIL e44/m51_263c NA NA 0 0 NA 0 0 30.9 3.31 10.1007/s00122-009-0970-0 NA NA t4072.T000253 Pet3.1 6 Pericarp thickness QTL analysis YW x CM334 RIL PG101 NA NA 0 0 NA 0 0 95.7 5.15 10.1007/s00122-009-0970-0 NA NA t4072.T000254 Pet6.1 6 Pericarp thickness QTL analysis YW x CM334 RIL p25/m45_185y NA NA 0 0 NA 0 0 65.4 3.59 10.1007/s00122-009-0970-0 NA NA t4072.T000255 PetLG15.1 6 Pericarp thickness QTL analysis YW x CM334 RIL e38/m60_224y NA NA 0 0 NA 0 0 0 7.82 10.1007/s00122-009-0970-0 NA NA t4072.T000256 PetLG24.1 6 Pericarp thickness QTL analysis YW x CM334 RIL e41/m54_184y NA NA 0 0 NA 0 0 0 4.27 10.1007/s00122-009-0970-0 NA NA t4072.T000257 PetLG27.1 6 Pericarp thickness QTL analysis YW x CM334 RIL e40/m49_305c NA NA 0 0 NA 0 0 0 5.75 10.1007/s00122-009-0970-0 NA NA t4072.T000258 Cst13.1 1 Capsanthin content Composite interval mapping (CIM) Segregating doubled-haploid (SM-DH) population F1 EPMS376, HpmsE072 NA 0 0 ge075-422pmc0296C 0 0 51.8 4 17 10.1270/jsbbs.18070 NA NA t4072.T000259 Cst13.1 1 Capsanthin content Composite interval mapping (CIM) Segregating doubled-haploid (SM-DH) population F1 EPMS376, HpmsE072 NA 0 0 ge075-422pmc0296C 0 0 51.8 4 17 10.1270/jsbbs.18070 NA NA t4072.T000260 Cst15.1 1 Capsanthin content Composite interval mapping (CIM) Segregating doubled-haploid (SM-DH) population F1 CAeMS015 NA 0 0 GPMS001 0 0 24.6 4.6 10.8 10.1270/jsbbs.18070 NA NA t4072.T000261 Cst15.1 1 Capsanthin content Composite interval mapping (CIM) Segregating doubled-haploid (SM-DH) population F1 GPMS001 NA 0 0 CAMS378 0 0 28.9 5 16.1 10.1270/jsbbs.18070 NA NA t4072.T000262 Cst15.1 1 Capsanthin content Composite interval mapping (CIM) Segregating doubled-haploid (SM-DH) population F1 GPMS001 NA 0 0 CAMS378 0 0 28.9 5 16.1 10.1270/jsbbs.18070 NA NA t4072.T000263 Cst7.1 1 Capsanthin content Composite interval mapping (CIM) Segregating doubled-haploid (SM-DH) population F1 CAMS424 NA 0 0 ge274-261pmc0414W 0 0 45.8 6 15.1 10.1270/jsbbs.18070 NA NA t4072.T000264 peplcv-1 1 Pep-YLCV Composite interval mapping (CIM) LP97-F2 F2 Chr1-LCV-102 NA 254 0 Chr1-LCV-103 256 0 185.41 2.7 9.9 10.1371/journal.pone.0264026 NA NA t4072.T000265 peplcv-12 1 Pep-YLCV Composite interval mapping (CIM) LP97-F2 F2 Chr12-LCV-94 NA 252 0 Chr12-LCV-96 256 0 113.51 4.2 6.3 10.1371/journal.pone.0264026 NA NA t4072.T000266 peplcv-7 1 Pep-YLCV Composite interval mapping (CIM) LP97-F2 F2 Chr7-LCV16 NA 26 0 Chr7-LCV-21 32 0 21.01 8.6 31.7 10.1371/journal.pone.0264026 NA NA t4072.T000267 QTL.Pc5 1 Phytophthora capsici root rot resistance the Haley Knott regression inter Recombinant Inbred Lines (RILs) F7 SCM002816.1_34981103 NA 0 0 0 0 81.2 5.2 30.4 10.1186/s12870-021-03387-7 NA NA t4072.T000268 QTL.Pc5 x QTL.Pc8.1 1 Phytophthora capsici root rot resistance A multiple interval mapping pipe Recombinant Inbred Lines (RILs) F7 SCM002816.1_34981103; NA 0 0 SCM002819.1_132653758 0 0 81.2 - 82.9 11.68 55.7 10.1186/s12870-021-03387-7 NA NA t4072.T000269 QTL.Pc8.1 1 Phytophthora capsici root rot resistance the Haley Knott regression inter Recombinant Inbred Lines (RILs) F7 SCM002819.1_132653758 NA 0 0 0 0 82.9 3.1 19.7 10.1186/s12870-021-03387-7 NA NA t4072.T000270 QTL.Pc8.1 x QTL.Pc8.2 1 Phytophthora capsici root rot resistance A multiple interval mapping pipe Recombinant Inbred Lines (RILs) F7 SCM002819.1_13265375; NA 0 0 SCM002819.1_133538774 0 0 82.9 - 78 6.35 35.8 10.1186/s12870-021-03387-7 NA NA t4072.T000271 QTL.Pc9 1 Phytophthora capsici root rot resistance the Haley Knott regression inter Recombinant Inbred Lines (RILs) F7 SCM002820.1_235989419 NA 0 0 0 0 18 3.4 21 10.1186/s12870-021-03387-7 NA NA t4072.T000272 1 Potato virus accumulation (VA) Compressed mixed linear model (C 257 accessions Accessions NA 1151249 0 0 0 5.53 8 10.1111/mpp.12874 NA NA t4072.T000273 1 Potato virus accumulation (VA) Compressed mixed linear model (C 257 accessions Accessions NA 1151254 0 0 0 5.36 7.1 10.1111/mpp.12874 NA NA t4072.T000274 1 Potato virus accumulation (VA) Compressed mixed linear model (C 257 accessions Accessions NA 234142995 0 0 0 4.77 6.8 10.1111/mpp.12874 NA NA t4072.T000275 1 Potato virus accumulation (VA) Compressed mixed linear model (C 257 accessions Accessions NA 234143013 0 0 0 4.97 7.1 10.1111/mpp.12874 NA NA t4072.T000276 1 Potato virus accumulation (VA) Multilocus mixed-model (MLMM) 257 accessions Accessions NA 1151254 0 0 0 6.55 11 10.1111/mpp.12874 NA NA t4072.T000277 1 Primary infenction (IF) of Potato virus Y Compressed mixed linear model (C 257 accessions Accessions NA 1151249 0 0 0 5.53 8.1 10.1111/mpp.12874 NA NA t4072.T000278 1 Primary infenction (IF) of Potato virus Y Compressed mixed linear model (C 257 accessions Accessions NA 234142995 0 0 0 9.56 15.3 10.1111/mpp.12874 NA NA t4072.T000279 1 Primary infenction (IF) of Potato virus Y Compressed mixed linear model (C 257 accessions Accessions NA 234143013 0 0 0 9.62 15.4 10.1111/mpp.12874 NA NA t4072.T000280 1 Primary infenction (IF) of Potato virus Y Compressed mixed linear model (C 257 accessions Accessions NA 235513719 0 0 0 5.29 7.7 10.1111/mpp.12874 NA NA t4072.T000281 1 Primary infenction (IF) of Potato virus Y Compressed mixed linear model (C 257 accessions Accessions NA 340333 0 0 0 4.8 6.8 10.1111/mpp.12874 NA NA t4072.T000282 1 Primary infenction (IF) of Potato virus Y Multilocus mixed-model (MLMM) 257 accessions Accessions NA 234143013 0 0 0 14.21 13.9 10.1111/mpp.12874 NA NA t4072.T000283 1 Primary infenction (IF) of Potato virus Y Multilocus mixed-model (MLMM) 257 accessions Accessions NA 340333 0 0 0 8.55 13.5 10.1111/mpp.12874 NA NA t4072.T000284 1 Primary infenction (IF) of Potato virus Y Multilocus mixed-model (MLMM) 257 accessions Accessions NA 58056303 0 0 0 6.16 7.8 10.1111/mpp.12874 NA NA t4072.T000285 qRRs-10.1 1 Resistance to bacterial wilt (BW) Composite interval mapping (CIM) QTL analyis population F2 ID10-178408813 NA 0 0 ID10-196208712 0 0 63.6 - 72.3 9.93 19.01 10.3390/ijms20235887 NA NA t4072.T000286 CMV-12 1 Resistance to Cucumber Mosic Virus (CMV) Standard Interval mapping Double haploid (DH) population Double haploid (DH) population HpmsE128 NA 0 0 0 0 12 12.06 10.1099/jgv.0.000835 NA NA t4072.T000287 CMV-6 1 Resistance to Cucumber Mosic Virus (CMV) Standard Interval mapping Double haploid (DH) population Double haploid (DH) population C2_At2g39690 NA 0 0 0 0 6 6.77 10.1099/jgv.0.000835 NA NA t4072.T000288 CMV-7 1 Resistance to Cucumber Mosic Virus (CMV) Standard Interval mapping Double haploid (DH) population Double haploid (DH) population HpmsE114 NA 0 0 0 0 7 16.36 10.1099/jgv.0.000835 NA NA t4072.T000289 CMV-7 × CMV-12 1 Resistance to Cucumber Mosic Virus (CMV) Multiple QTL Model (MQM) Double haploid (DH) population Double haploid (DH) population NA 0 0 0 0 - 5.77 10.1099/jgv.0.000835 NA NA t4072.T000290 qcmv11.1 1 Resistance to Cucumber Mosic Virus (CMV) Interval mapping(IM) and Multipl F2:3 population F2:3 population Marker6201026 NA 0 0 0 0 58.477 - 60.528 3.42 10.2 10.1270/jsbbs.17063 NA NA t4072.T000291 qcmv11.2 1 Resistance to Cucumber Mosic Virus (CMV) Interval mapping(IM) and Multipl F2:3 population F2:3 population Marker5409028 NA 0 0 0 0 114.258 - 117.236 4.3 19.2 10.1270/jsbbs.17063 NA NA t4072.T000292 qcmv12.1 1 Resistance to Cucumber Mosic Virus (CMV) Interval mapping(IM) and Multipl F2:3 population F2:3 population Marker17652010 NA 0 0 0 0 21.442 - 22.468 3.58 7.3 10.1270/jsbbs.17063 NA NA t4072.T000293 E1Jha-11.1 1 Resistance to Phytophthora capsici in Isolate JHAI1–7 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 48.41 9.01 8.47 10.1038/s41598-019-46342-1 NA NA t4072.T000294 E1Jha-11.2 1 Resistance to Phytophthora capsici in Isolate JHAI1–7 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 59.31 7.71 7.37 10.1038/s41598-019-46342-1 NA NA t4072.T000295 E1Jha-5.1 1 Resistance to Phytophthora capsici in Isolate JHAI1–7 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 22.61 18.3 27.31 10.1038/s41598-019-46342-1 NA NA t4072.T000296 E1Jha-5.2 1 Resistance to Phytophthora capsici in Isolate JHAI1–7 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 28.91 29.73 38.99 10.1038/s41598-019-46342-1 NA NA t4072.T000297 E1Jha-8.1 1 Resistance to Phytophthora capsici in Isolate JHAI1–7 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 13.31 7.25 6.85 10.1038/s41598-019-46342-1 NA NA t4072.T000298 E1Jha-8.2 1 Resistance to Phytophthora capsici in Isolate JHAI1–7 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 23.71 5.82 5.27 10.1038/s41598-019-46342-1 NA NA t4072.T000299 E2Jha-11.1 1 Resistance to Phytophthora capsici in Isolate JHAI1–7 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 48.41 9.44 8.82 10.1038/s41598-019-46342-1 NA NA t4072.T000300 E2Jha-11.2 1 Resistance to Phytophthora capsici in Isolate JHAI1–7 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 60.51 7.34 7.03 10.1038/s41598-019-46342-1 NA NA t4072.T000301 E2Jha-5.1 1 Resistance to Phytophthora capsici in Isolate JHAI1–7 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 22.61 18.13 26.62 10.1038/s41598-019-46342-1 NA NA t4072.T000302 E2Jha-5.2 1 Resistance to Phytophthora capsici in Isolate JHAI1–7 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 28.91 29.66 38.21 10.1038/s41598-019-46342-1 NA NA t4072.T000303 E2Jha-8.1 1 Resistance to Phytophthora capsici in Isolate JHAI1–7 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 12.31 4.61 4.36 10.1038/s41598-019-46342-1 NA NA t4072.T000304 E2Jha-8.2 1 Resistance to Phytophthora capsici in Isolate JHAI1–7 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 19.51 4.57 4.26 10.1038/s41598-019-46342-1 NA NA t4072.T000305 E1Kpc-1 1 Resistance to Phytophthora capsici in Isolate KPC-1 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 77.61 3.97 4.57 10.1038/s41598-019-46342-1 NA NA t4072.T000306 E1Kpc-11.1 1 Resistance to Phytophthora capsici in Isolate KPC-1 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 41.4 4.78 5.59 10.1038/s41598-019-46342-1 NA NA t4072.T000307 E1Kpc-11.2 1 Resistance to Phytophthora capsici in Isolate KPC-1 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 52.01 4.2 4.94 10.1038/s41598-019-46342-1 NA NA t4072.T000308 E1Kpc-5.2 1 Resistance to Phytophthora capsici in Isolate KPC-1 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 28.91 21.32 33.77 10.1038/s41598-019-46342-1 NA NA t4072.T000309 E1Kpc-5.3 1 Resistance to Phytophthora capsici in Isolate KPC-1 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 34.61 14.87 25.4 10.1038/s41598-019-46342-1 NA NA t4072.T000310 E2Kpc-1 1 Resistance to Phytophthora capsici in Isolate KPC-1 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 77.61 6.69 7.81 10.1038/s41598-019-46342-1 NA NA t4072.T000311 E2Kpc-4 1 Resistance to Phytophthora capsici in Isolate KPC-1 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 28.41 4.64 5.41 10.1038/s41598-019-46342-1 NA NA t4072.T000312 E2Kpc-5.2 1 Resistance to Phytophthora capsici in Isolate KPC-1 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 29.21 23.25 37.12 10.1038/s41598-019-46342-1 NA NA t4072.T000313 E2Kpc-5.3 1 Resistance to Phytophthora capsici in Isolate KPC-1 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 34.61 14.17 25.14 10.1038/s41598-019-46342-1 NA NA t4072.T000314 E2Kpc-7 1 Resistance to Phytophthora capsici in Isolate KPC-1 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 38.71 3.6 3.73 10.1038/s41598-019-46342-1 NA NA t4072.T000315 E1My-11 1 Resistance to Phytophthora capsici in Isolate MY-1 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 66.41 4.89 8.13 10.1038/s41598-019-46342-1 NA NA t4072.T000316 E1My-2 1 Resistance to Phytophthora capsici in Isolate MY-1 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 45.91 4.3 6.99 10.1038/s41598-019-46342-1 NA NA t4072.T000317 E1My-5.1 1 Resistance to Phytophthora capsici in Isolate MY-1 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 22.61 8.94 18.22 10.1038/s41598-019-46342-1 NA NA t4072.T000318 E1My-5.2 1 Resistance to Phytophthora capsici in Isolate MY-1 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 28.61 10.8 19.68 10.1038/s41598-019-46342-1 NA NA t4072.T000319 E2My-11 1 Resistance to Phytophthora capsici in Isolate MY-1 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 64.41 3.33 8.9 10.1038/s41598-019-46342-1 NA NA t4072.T000320 E2My-5.1 1 Resistance to Phytophthora capsici in Isolate MY-1 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 22.31 4.97 10.02 10.1038/s41598-019-46342-1 NA NA t4072.T000321 E2My-5.2 1 Resistance to Phytophthora capsici in Isolate MY-1 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 28.61 6.36 12.61 10.1038/s41598-019-46342-1 NA NA t4072.T000322 E2My-5.3 1 Resistance to Phytophthora capsici in Isolate MY-1 Composite interval mapping (CIM) The ECRIL mapping population F7:8 NA 0 0 0 0 34.61 4.38 8.9 10.1038/s41598-019-46342-1 NA NA t4072.T000323 PVY-12 1 Resistance to Potato Virus Y (PVY) Standard Interval mapping Double haploid (DH) population Double haploid (DH) population SNP11168 NA 0 0 0 0 12 15.3 10.1099/jgv.0.000835 NA NA t4072.T000324 PVY-6 1 Resistance to Potato Virus Y (PVY) Standard Interval mapping Double haploid (DH) population Double haploid (DH) population Epms_376 NA 0 0 0 0 6 4.93 10.1099/jgv.0.000835 NA NA t4072.T000325 PVY-7 1 Resistance to Potato Virus Y (PVY) Standard Interval mapping Double haploid (DH) population Double haploid (DH) population HpmsE114 NA 0 0 0 0 7 20.71 10.1099/jgv.0.000835 NA NA t4072.T000326 PVY-7 × PVY-12 1 Resistance to Potato Virus Y (PVY) Multiple QTL Model (MQM) Double haploid (DH) population Double haploid (DH) population NA 0 0 0 0 - 8.48 10.1099/jgv.0.000835 NA NA t4072.T000327 Mare-P1 1 The resistance of root-knot nematodes (RKN), M.arenaria Simple interval mapping (SIM) 130 F2:3 families F2 or F3 population SP1798 NA 0 0 0 0 173.4 - 179 36.6 73.8 10.3389/fpls.2016.00632 NA NA t4072.T000328 Minc-P1 1 The resistance of root-knot nematodes (RKN), M.incognita Simple interval mapping (SIM) 130 F2:3 families F2 or F3 population SP1790 NA 0 0 0 0 173.4 - 184 14.1 40.9 10.3389/fpls.2016.00632 NA NA t4072.T000329 Mjav-P1 1 The resistance of root-knot nematodes (RKN), M.javanica Simple interval mapping (SIM) 130 F2:3 families F2 or F3 population SP1798 NA 0 0 0 0 163.9 - 190.5 7.7 31.9 10.3389/fpls.2016.00632 NA NA t4072.T000330 Mjav-P9 1 The resistance of root-knot nematodes (RKN), M.javanica Simple interval mapping (SIM) 130 F2:3 families F2 or F3 population SP381 NA 0 0 0 0 0 - 6.4 12.9 52.4 10.3389/fpls.2016.00632 NA NA t4072.T000331 4 Angle of the distal fruit end Multiple QTL Model (MQM) QTL-NILs F4 NA 130 0 132 0 58.7 70 10.3389/fpls.2021.815589 NA NA t4072.T000332 - 4 Anthocyanin Stripe on young fruit (Ant) Multiple QTL Model (MQM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 13.3 40.5 10.3835/plantgenome2016.12.0125 NA NA t4072.T000333 Ant10.1 4 Anthocyanin Stripe on young fruit (Ant) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 24.5 13.3 40.5 10.3835/plantgenome2016.12.0125 NA NA t4072.T000334 - 4 Blossom-end shape (BLOS) Multiple QTL Model (MQM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 6.4 22 10.3835/plantgenome2016.12.0125 NA NA t4072.T000335 BLOS12.1 4 Blossom-end shape (BLOS) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 11.4 3.4 10.9 10.3835/plantgenome2016.12.0125 NA NA t4072.T000336 BLOS2.1 4 Blossom-end shape (BLOS) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 62.5 3.4 10.9 10.3835/plantgenome2016.12.0125 NA NA t4072.T000337 CS-1.1 4 Calyx shape Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 109 - 115.4 3.7 12.9 10.1093/dnares/dsv038 NA NA t4072.T000338 CS-1.2 4 Calyx shape Composite interval mapping 2011, 2012a Recombinant inbred lines (RILs) NA 0 0 0 0 178.5 - 184.1 3.6 11.8 10.1093/dnares/dsv038 NA NA t4072.T000339 CS-11 4 Calyx shape Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 9.8 - 14.2 2.6 9.5 10.1093/dnares/dsv038 NA NA t4072.T000340 CS-3.1 4 Calyx shape Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 4.9 - 15.1 2.2 7.8 10.1093/dnares/dsv038 NA NA t4072.T000341 CS-3.2 4 Calyx shape Composite interval mapping 2011, 2012a Recombinant inbred lines (RILs) NA 0 0 0 0 15.1 - 20.3 3.5 10.2 10.1093/dnares/dsv038 NA NA t4072.T000342 CS-3.3 4 Calyx shape Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 20.3 - 23.3 2.4 8.4 10.1093/dnares/dsv038 NA NA t4072.T000343 CS-3.4 4 Calyx shape Composite interval mapping 2011, 2012a Recombinant inbred lines (RILs) NA 0 0 0 0 45.5 - 52.1 3.3 9.4 10.1093/dnares/dsv038 NA NA t4072.T000344 CS-3.5 4 Calyx shape Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 54.1 - 59.1 3.3 11.1 10.1093/dnares/dsv038 NA NA t4072.T000345 CS-5 4 Calyx shape Composite interval mapping 2011, 2012a Recombinant inbred lines (RILs) NA 0 0 0 0 53.1 - 56 3.1 11.3 10.1093/dnares/dsv038 NA NA t4072.T000346 CS-9 4 Calyx shape Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 77.9 - 81.7 2.9 10.3 10.1093/dnares/dsv038 NA NA t4072.T000347 Ffn12 4 First flower node Composite interval mapping (CIM) A population of 146 F10 RILs Recombinant inbred lines (RILs) Marker1629963 NA 0 0 Marker1686312 0 0 147.77 - 148.25 6.26 5.5 10.1186/s12870-019-1753-7 NA NA t4072.T000348 Ffn2.1 4 First flower node Composite interval mapping (CIM) A population of 146 F10 RILs Recombinant inbred lines (RILs) Marker110947 NA 0 0 Marker59,204 0 0 103.12 - 105.37 21.23 28.62 10.1186/s12870-019-1753-7 NA NA t4072.T000349 Ffn2.2 4 First flower node Composite interval mapping (CIM) A population of 146 F10 RILs Recombinant inbred lines (RILs) Marker141252 NA 0 0 Marker111,037 0 0 141.04 - 142.5 20.17 19.56 10.1186/s12870-019-1753-7 NA NA t4072.T000350 Ffn9 4 First flower node Composite interval mapping (CIM) A population of 146 F10 RILs Recombinant inbred lines (RILs) Marker3157646 NA 0 0 Marker3395924 0 0 53.87 - 55.29 6.21 6.5 10.1186/s12870-019-1753-7 NA NA t4072.T000351 FLS-1 4 Flower size Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 113.7 - 115.9 5.8 19.6 10.1093/dnares/dsv038 NA NA t4072.T000352 FLS-10 4 Flower size Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 57 - 58.4 2.4 8.7 10.1093/dnares/dsv038 NA NA t4072.T000353 FLS-2 4 Flower size Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 60.2 - 63.9 2.8 9 10.1093/dnares/dsv038 NA NA t4072.T000354 FLS-3.1 4 Flower size Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 18.2 - 23.3 3.7 11.3 10.1093/dnares/dsv038 NA NA t4072.T000355 FLS-3.2 4 Flower size Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 70.7 - 74.7 2.9 9 10.1093/dnares/dsv038 NA NA t4072.T000356 FLS-3.3 4 Flower size Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 89.1 - 93.7 2.6 7.8 10.1093/dnares/dsv038 NA NA t4072.T000357 FLS-7 4 Flower size Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 46.8 - 53.1 2.4 8.8 10.1093/dnares/dsv038 NA NA t4072.T000358 FLS-8 4 Flower size Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 89.7 - 96.6 2.7 12.2 10.1093/dnares/dsv038 NA NA t4072.T000359 Ft2.1 4 Flowering time (2014) Composite interval mapping (CIM) the interspecific cross F2 population F2 population Marker6530388 NA 0 0 Marker6433087 0 0 5.12 25.52 10.1038/s41598-018-38370-0 NA NA t4072.T000360 Ft2.1 4 Flowering time (2014) multilocus QTL mapping the interspecific cross F2 population F2 population Marker6371227 NA 0 0 Marker6371227 0 0 22.72 33.5 10.1038/s41598-018-38370-0 NA NA t4072.T000361 Ft6.1 4 Flowering time (2014) Composite interval mapping (CIM) the interspecific cross F2 population F2 population Marker3582600 NA 0 0 Marker3748750 0 0 2.96 12.18 10.1038/s41598-018-38370-0 NA NA t4072.T000362 Ft6.1 4 Flowering time (2014) multilocus QTL mapping the interspecific cross F2 population F2 population Marker3686000 NA 0 0 Marker3360006 0 0 15.3 17.13 10.1038/s41598-018-38370-0 NA NA t4072.T000363 Ft6.2 4 Flowering time (2014) Composite interval mapping (CIM) the interspecific cross F2 population F2 population Marker3574378 NA 0 0 Marker370912 0 0 2.95 11.14 10.1038/s41598-018-38370-0 NA NA t4072.T000364 Ft6.2 4 Flowering time (2014) multilocus QTL mapping the interspecific cross F2 population F2 population Marker3784653 NA 0 0 Marker3727891 0 0 9.19 9.99 10.1038/s41598-018-38370-0 NA NA t4072.T000365 Ft2.1 4 Flowering time (2015) Composite interval mapping (CIM) the interspecific cross F2 population F2 population Marker6530388 NA 0 0 Marker6448176 0 0 5.43 27.87 10.1038/s41598-018-38370-0 NA NA t4072.T000366 Ft2.1 4 Flowering time (2015) multilocus QTL mapping the interspecific cross F2 population F2 population Marker6448176 NA 0 0 Marker6448176 0 0 20.49 28.76 10.1038/s41598-018-38370-0 NA NA t4072.T000367 Ft6.1 4 Flowering time (2015) Composite interval mapping (CIM) the interspecific cross F2 population F2 population Marker3566196 NA 0 0 Marker3484733 0 0 3.21 13.57 10.1038/s41598-018-38370-0 NA NA t4072.T000368 Ft6.1 4 Flowering time (2015) multilocus QTL mapping the interspecific cross F2 population F2 population Marker3566196 NA 0 0 Marker3566196 0 0 6.42 4.96 10.1038/s41598-018-38370-0 NA NA t4072.T000369 Ft6.2 4 Flowering time (2015) Composite interval mapping (CIM) the interspecific cross F2 population F2 population Marker3784653 NA 0 0 Marker343103 0 0 2.48 9.23 10.1038/s41598-018-38370-0 NA NA t4072.T000370 Ft6.2 4 Flowering time (2015) multilocus QTL mapping the interspecific cross F2 population F2 population Marker3784653 NA 0 0 Marker343103 0 0 8.01 6.07 10.1038/s41598-018-38370-0 NA NA t4072.T000371 Ft2.1 4 Flowering time (2017) Composite interval mapping (CIM) the interspecific cross F2 population F2 population Marker6371227 NA 0 0 Marker6448176 0 0 4.92 24.59 10.1038/s41598-018-38370-0 NA NA t4072.T000372 Ft2.1 4 Flowering time (2017) multilocus QTL mapping the interspecific cross F2 population F2 population Marker6433087 NA 0 0 Marker6433087 0 0 12.7 23.01 10.1038/s41598-018-38370-0 NA NA t4072.T000373 Ft6.1 4 Flowering time (2017) Composite interval mapping (CIM) the interspecific cross F2 population F2 population Marker3893018 NA 0 0 Marker3748750 0 0 2.45 10.53 10.1038/s41598-018-38370-0 NA NA t4072.T000374 Ft6.2 4 Flowering time (2017) Composite interval mapping (CIM) the interspecific cross F2 population F2 population Marker3355152 NA 0 0 Marker396246 0 0 2.6 11.23 10.1038/s41598-018-38370-0 NA NA t4072.T000375 Ft6.2 4 Flowering time (2017) multilocus QTL mapping the interspecific cross F2 population F2 population Marker3857068 NA 0 0 Marker3857068 0 0 5.16 6.98 10.1038/s41598-018-38370-0 NA NA t4072.T000376 FD-1 4 Fruit diameter Composite interval mapping 2011, 2012a, 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 108.8 - 121.3 5.6 20 10.1093/dnares/dsv038 NA NA t4072.T000377 FD-11 4 Fruit diameter Composite interval mapping 2011, 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 21.5 - 24.6 2.8 10.1 10.1093/dnares/dsv038 NA NA t4072.T000378 FD-2 4 Fruit diameter Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 0 - 10.1 7.1 16 10.1093/dnares/dsv038 NA NA t4072.T000379 FD-3.1 4 Fruit diameter Composite interval mapping 2011, 2012a, 2012b 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 37.7 - 41.4 6 17.5 10.1093/dnares/dsv038 NA NA t4072.T000380 FD-3.2 4 Fruit diameter Composite interval mapping 2011, 2012a, 2012b 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 47.2 - 59 7.4 20.5 10.1093/dnares/dsv038 NA NA t4072.T000381 4 Fruit length Multiple QTL Model (MQM) QTL-NILs F4 NA 130 0 132 0 41.4 56.9 10.3389/fpls.2021.815589 NA NA t4072.T000382 FL-3.1 4 Fruit length Composite interval mapping 2011, 2012a, 2012b Recombinant inbred lines (RILs) NA 0 0 0 0 40.6 - 48 8.6 23.6 10.1093/dnares/dsv038 NA NA t4072.T000383 FL-3.2 4 Fruit length Composite interval mapping 2011, 2012b Recombinant inbred lines (RILs) NA 0 0 0 0 48.5 - 52.1 10 26.7 10.1093/dnares/dsv038 NA NA t4072.T000384 FL-3.3 4 Fruit length Composite interval mapping 2012a, 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 54.1 - 60.8 6.3 2.13 10.1093/dnares/dsv038 NA NA t4072.T000385 FL-3.4 4 Fruit length Composite interval mapping 2011, 2012a, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 93.3 - 97.3 2.9 12 10.1093/dnares/dsv038 NA NA t4072.T000386 FL-3.5 4 Fruit length Composite interval mapping 2011, 2012a Recombinant inbred lines (RILs) NA 0 0 0 0 99.7 - 106 3.4 10 10.1093/dnares/dsv038 NA NA t4072.T000387 FL-8 4 Fruit length Composite interval mapping 2011, 2012a, 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 51.9 - 63.8 6.5 20.8 10.1093/dnares/dsv038 NA NA t4072.T000388 paufl2.1 4 Fruit length (cm) Composite interval mapping (CIM) the interspecific cross F2 population F2 population AVRDC236 NA 0 0 ABRDC*MD705 0 0 2.6 - 8.1 5.53 10.1038/s41598-018-23279-5 NA NA t4072.T000389 paufl2.2 4 Fruit length (cm) Composite interval mapping (CIM) the interspecific cross F2 population F2 population GPMS100 NA 0 0 ABRDC*MD782 0 0 13.9 - 28.9 5.26 10.1038/s41598-018-23279-5 NA NA t4072.T000390 FP-1 4 Fruit position Composite interval mapping 2011, 2012a,2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 103.7 - 117.7 3.8 14.3 10.1093/dnares/dsv038 NA NA t4072.T000391 FP-12.1 4 Fruit position Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 49 - 50.5 20 53.6 10.1093/dnares/dsv038 NA NA t4072.T000392 FP-12.2 4 Fruit position Composite interval mapping 2011, 2012a, 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 57.7 - 58.6 26.9 63.9 10.1093/dnares/dsv038 NA NA t4072.T000393 FP-12.3 4 Fruit position Composite interval mapping 2011, 2012a Recombinant inbred lines (RILs) NA 0 0 0 0 65.7 - 68.1 17.1 47 10.1093/dnares/dsv038 NA NA t4072.T000394 FP-4.1 4 Fruit position Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 35.1 - 42.6 3.3 11 10.1093/dnares/dsv038 NA NA t4072.T000395 FP-4.2 4 Fruit position Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 108 - 115.7 2.2 7.5 10.1093/dnares/dsv038 NA NA t4072.T000396 FS-11 4 Fruit shape Composite interval mapping 2011, 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 23.4 - 32.2 2.8 10.2 10.1093/dnares/dsv038 NA NA t4072.T000397 FS-3.1 4 Fruit shape Composite interval mapping 2011, 2012a, 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 47.9 - 51.8 13.6 37 10.1093/dnares/dsv038 NA NA t4072.T000398 FS-3.2 4 Fruit shape Composite interval mapping 2011, 2012a, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 54.1 - 59 11.7 35.3 10.1093/dnares/dsv038 NA NA t4072.T000399 FS-8 4 Fruit shape Composite interval mapping 2011, 2012a, 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 52.7 - 62.6 3.9 13.6 10.1093/dnares/dsv038 NA NA t4072.T000400 - 4 Fruit shape (FrSHP) Multiple QTL Model (MQM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 4.1 14.9 10.3835/plantgenome2016.12.0125 NA NA t4072.T000401 FrSHP2.1 4 Fruit shape (FrSHP) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 70 4.1 14.9 10.3835/plantgenome2016.12.0125 NA NA t4072.T000402 4 Fruit shape index Multiple QTL Model (MQM) QTL-NILs F4 NA 130 0 132 0 55.6 67.9 10.3389/fpls.2021.815589 NA NA t4072.T000403 FW-1 4 Fruit weight Composite interval mapping 2011, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 112.5 - 116.4 4.3 15.8 10.1093/dnares/dsv038 NA NA t4072.T000404 FW-2.1 4 Fruit weight Composite interval mapping 2012a, 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 0 - 8 3 11.4 10.1093/dnares/dsv038 NA NA t4072.T000405 FW-2.2 4 Fruit weight Composite interval mapping 2011, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 64.3 - 73.1 3.5 12.1 10.1093/dnares/dsv038 NA NA t4072.T000406 FW-3 4 Fruit weight Composite interval mapping 2011,2012a Recombinant inbred lines (RILs) NA 0 0 0 0 47.6 - 62.5 3.7 12.7 10.1093/dnares/dsv038 NA NA t4072.T000407 FW-6.1 4 Fruit weight Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 53.7 - 60.2 3 11.7 10.1093/dnares/dsv038 NA NA t4072.T000408 FW-6.2 4 Fruit weight Composite interval mapping 2012a, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 59.8 - 68.1 2.3 8.5 10.1093/dnares/dsv038 NA NA t4072.T000409 4 Fruit width Multiple QTL Model (MQM) QTL-NILs F4 NA 127 0 0 0 14.8 26.1 10.3389/fpls.2021.815589 NA NA t4072.T000410 qAGI12.2 4 Fruits in October of α-Glucosidase Inhibitory (AGI) Activity Composite interval mapping (CIM) QTL analyis population F2 C12_226881713 NA 0 0 C12_226678693 0 0 148.02 4.13 6.78 10.3390/genes11101116 NA NA t4072.T000411 qAGI5.2 4 Fruits in October of α-Glucosidase Inhibitory (AGI) Activity Composite interval mapping (CIM) QTL analyis population F2 C05_231017428 NA 0 0 C05_233235463 0 0 150.92 3.93 6.34 10.3390/genes11101116 NA NA t4072.T000412 LA_BG-green10 4 Green fruit color Composite interval mapping (CIM) LA RILs F7:9 LA10_24 NA 193 0 204 0 81.4 - 106.7 13.56 43.2 10.3389/fpls.2022.922963 NA NA t4072.T000413 IFC-10.1 4 Immature fruit colour Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 66.2 - 69 3.5 9.2 10.1093/dnares/dsv038 NA NA t4072.T000414 IFC-10.2 4 Immature fruit colour Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 75.7 - 81.8 14.3 40.2 10.1093/dnares/dsv038 NA NA t4072.T000415 IFC-10.3 4 Immature fruit colour Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 82.6 - 86.1 3.8 19.3 10.1093/dnares/dsv038 NA NA t4072.T000416 IFC-11.1 4 Immature fruit colour Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 6.8 - 13.8 2.3 8.2 10.1093/dnares/dsv038 NA NA t4072.T000417 IFC-11.2 4 Immature fruit colour Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 81.3 - 85.6 2.6 8.8 10.1093/dnares/dsv038 NA NA t4072.T000418 IFC-12 4 Immature fruit colour Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 17.5 - 24.1 3.2 11.3 10.1093/dnares/dsv038 NA NA t4072.T000419 INL-1 4 Internode length Composite interval mapping 2012a, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 28.8 - 32.9 2.9 11 10.1093/dnares/dsv038 NA NA t4072.T000420 INL-10 4 Internode length Composite interval mapping 2012a, 2012b Recombinant inbred lines (RILs) NA 0 0 0 0 0.6 - 22.5 2.4 7.4 10.1093/dnares/dsv038 NA NA t4072.T000421 INL-2 4 Internode length Composite interval mapping 2012a, 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 82.3 - 90.8 4.8 16.9 10.1093/dnares/dsv038 NA NA t4072.T000422 INL-6.1 4 Internode length Composite interval mapping 2012a, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 0 - 4.9 3.6 11.9 10.1093/dnares/dsv038 NA NA t4072.T000423 INL-6.2 4 Internode length Composite interval mapping 2012a, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 25.8 - 37.2 3.1 10.2 10.1093/dnares/dsv038 NA NA t4072.T000424 LBN-2.1 4 Lateral branch number Composite interval mapping 2012a, 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 91.4 - 98.3 12.5 40 10.1093/dnares/dsv038 NA NA t4072.T000425 LBN-2.2 4 Lateral branch number Composite interval mapping 2012a, 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 99.7 - 104.5 6.4 23.1 10.1093/dnares/dsv038 NA NA t4072.T000426 - 4 Leaf area (LfA) Multiple QTL Model (MQM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 10.2 34.4 10.3835/plantgenome2016.12.0125 NA NA t4072.T000427 LfA1.1 4 Leaf area (LfA) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 31.2 4.1 12.1 10.3835/plantgenome2016.12.0125 NA NA t4072.T000428 LfA2.1 4 Leaf area (LfA) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 98 3.9 11.6 10.3835/plantgenome2016.12.0125 NA NA t4072.T000429 LfA3.1 4 Leaf area (LfA) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 165.1 5.4 16.3 10.3835/plantgenome2016.12.0125 NA NA t4072.T000430 LL-11.1 4 Leaf length Composite interval mapping 2012a, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 47.3 - 57.1 4.2 16.1 10.1093/dnares/dsv038 NA NA t4072.T000431 LL-11.2 4 Leaf length Composite interval mapping 2012a, 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 65.3 - 82.4 3.6 12.3 10.1093/dnares/dsv038 NA NA t4072.T000432 LL-6 4 Leaf length Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 42 - 52.7 4.5 16.6 10.1093/dnares/dsv038 NA NA t4072.T000433 LL-9 4 Leaf length Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 75.3 - 84.9 6.2 20.8 10.1093/dnares/dsv038 NA NA t4072.T000434 - 4 Leaf perimeter (LfP) Multiple QTL Model (MQM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 8 28.1 10.3835/plantgenome2016.12.0125 NA NA t4072.T000435 LfP1.1 4 Leaf perimeter (LfP) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 27.3 4 13.1 10.3835/plantgenome2016.12.0125 NA NA t4072.T000436 LfP3.1 4 Leaf perimeter (LfP) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 166 5.2 17.2 10.3835/plantgenome2016.12.0125 NA NA t4072.T000437 LW-8 4 Leaf width Composite interval mapping 2012a, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 56.7 - 70.6 5.8 18.2 10.1093/dnares/dsv038 NA NA t4072.T000438 - 4 Leaf width midheight (LfWM) Multiple QTL Model (MQM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 4.4 16.7 10.3835/plantgenome2016.12.0125 NA NA t4072.T000439 LfWM3.1 4 Leaf width midheight (LfWM) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 165.1 4.4 16.7 10.3835/plantgenome2016.12.0125 NA NA t4072.T000440 qAGI1.1 4 Leave in April of α-Glucosidase Inhibitory (AGI) Activity Composite interval mapping (CIM) QTL analyis population F2 C01_222185987 NA 0 0 C01_222174921 0 0 179.72 3.2 6.22 10.3390/genes11101116 NA NA t4072.T000441 qAGI11.1 4 Leave in April of α-Glucosidase Inhibitory (AGI) Activity Composite interval mapping (CIM) QTL analyis population F2 C11_114388706 NA 0 0 C11_77970167 0 0 107.16 3.3 12.96 10.3390/genes11101116 NA NA t4072.T000442 qAGI5.1 4 Leaves in July of α-Glucosidase Inhibitory (AGI) Activity Composite interval mapping (CIM) QTL analyis population F2 C05_203360201 NA 0 0 C05_223379175 0 0 114.7 5.65 15.57 10.3390/genes11101116 NA NA t4072.T000443 qAGI12.1 4 Leaves in October of α-Glucosidase Inhibitory (AGI) Activity Composite interval mapping (CIM) QTL analyis population F2 C12_203983726 NA 0 0 C12_214045543 0 0 118.08 3.72 8.54 10.3390/genes11101116 NA NA t4072.T000444 qAGI9.1 4 Leaves in October of α-Glucosidase Inhibitory (AGI) Activity Composite interval mapping (CIM) QTL analyis population F2 C09_70070394 NA 0 0 C09_64873309 0 0 109.15 4.05 8.05 10.3390/genes11101116 NA NA t4072.T000445 - 4 Longitudinal area (LA) Multiple QTL Model (MQM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 6.2 28.9 10.3835/plantgenome2016.12.0125 NA NA t4072.T000446 LA3.1 4 Longitudinal area (LA) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 146 6.2 28.9 10.3835/plantgenome2016.12.0125 NA NA t4072.T000447 - 4 Longitudinal height midwidth (LHM) Multiple QTL Model (MQM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 4.7 22.5 10.3835/plantgenome2016.12.0125 NA NA t4072.T000448 LHM3.1 4 Longitudinal height midwidth (LHM) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 148.2 4.7 22.5 10.3835/plantgenome2016.12.0125 NA NA t4072.T000449 - 4 Longitudinal maximum height (LMH) Multiple QTL Model (MQM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 7.9 35.3 10.3835/plantgenome2016.12.0125 NA NA t4072.T000450 LMH1.1 4 Longitudinal maximum height (LMH) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 68.9 3.1 12.1 10.3835/plantgenome2016.12.0125 NA NA t4072.T000451 LMH3.1 4 Longitudinal maximum height (LMH) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 148.2 6.1 25.5 10.3835/plantgenome2016.12.0125 NA NA t4072.T000452 - 4 Longitudinal maximum width (LMW) Multiple QTL Model (MQM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 4.6 22.2 10.3835/plantgenome2016.12.0125 NA NA t4072.T000453 LMW3.1 4 Longitudinal maximum width (LMW) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 146 4.6 22.2 10.3835/plantgenome2016.12.0125 NA NA t4072.T000454 - 4 Longitudinal perimeter (LP) Multiple QTL Model (MQM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 12.4 49.4 10.3835/plantgenome2016.12.0125 NA NA t4072.T000455 LP1.1 4 Longitudinal perimeter (LP) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 68.9 4.3 13.5 10.3835/plantgenome2016.12.0125 NA NA t4072.T000456 LP3.1 4 Longitudinal perimeter (LP) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 144 9.1 32.6 10.3835/plantgenome2016.12.0125 NA NA t4072.T000457 LP4.1 4 Longitudinal perimeter (LP) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 63.6 3.6 10.9 10.3835/plantgenome2016.12.0125 NA NA t4072.T000458 - 4 Longitudinal width midhheight (LMW) Multiple QTL Model (MQM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 4.3 21 10.3835/plantgenome2016.12.0125 NA NA t4072.T000459 LWM3.1 4 Longitudinal width midhheight (LMW) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 144 4.3 21 10.3835/plantgenome2016.12.0125 NA NA t4072.T000460 MSL-10 4 Main stem length Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 58.4 - 62.6 3.3 12.3 10.1093/dnares/dsv038 NA NA t4072.T000461 MSL-11 4 Main stem length Composite interval mapping 2012a, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 76.9 - 82.7 2.7 10.4 10.1093/dnares/dsv038 NA NA t4072.T000462 MSL-12 4 Main stem length Composite interval mapping 2012a, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 57.8 - 63 2.6 9.9 10.1093/dnares/dsv038 NA NA t4072.T000463 MSL-7 4 Main stem length Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 47.2 - 51.5 5.2 18.6 10.1093/dnares/dsv038 NA NA t4072.T000464 MSL-8.1 4 Main stem length Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 84.2 - 94.9 6.3 18.3 10.1093/dnares/dsv038 NA NA t4072.T000465 MSL8.2 4 Main stem length Composite interval mapping 2012a, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 111.1 - 133.2 4.3 13.4 10.1093/dnares/dsv038 NA NA t4072.T000466 TH-mf1 4 Multiple flower Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) F10:12 NA 0 0 0 0 102.1 - 106.9 6.05 6.1 10.3389/fpls.2022.884338 NA NA t4072.T000467 TH-mf11 4 Multiple flower Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) F10:12 NA 0 0 0 0 3.3 - 8.4 7.19 8.13 10.3389/fpls.2022.884338 NA NA t4072.T000468 TH-mf2 4 Multiple flower Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) F10:12 NA 0 0 0 0 53.7 - 65.1 3.03 3.03 10.3389/fpls.2022.884338 NA NA t4072.T000469 TH-mf7 4 Multiple flower Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) F10:12 NA 0 0 0 0 48.3 - 52.3 6.15 6.45 10.3389/fpls.2022.884338 NA NA t4072.T000470 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S1_131644198 NA 0 0 0 0 3.046 0.0009 27857720 NA NA t4072.T000471 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S3_252341359 NA 0 0 0 0 3.078 0.0008 27857720 NA NA t4072.T000472 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S2_130946711 NA 0 0 0 0 3.18 0.0007 27857720 NA NA t4072.T000473 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S11_257395608 NA 0 0 0 0 3.183 0.0007 27857720 NA NA t4072.T000474 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S11_257395610 NA 0 0 0 0 3.183 0.0007 27857720 NA NA t4072.T000475 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S3_257225287 NA 0 0 0 0 3.188 0.0006 27857720 NA NA t4072.T000476 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S3_70295226 NA 0 0 0 0 3.22 0.0006 27857720 NA NA t4072.T000477 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S2_139076418 NA 0 0 0 0 3.263 0.0005 27857720 NA NA t4072.T000478 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S1_96976222 NA 0 0 0 0 3.285 0.0005 27857720 NA NA t4072.T000479 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S8_142510499 NA 0 0 0 0 3.315 0.0005 27857720 NA NA t4072.T000480 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S6_2635088 NA 0 0 0 0 3.381 0.0004 27857720 NA NA t4072.T000481 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S10_229515157 NA 0 0 0 0 3.412 0.0004 27857720 NA NA t4072.T000482 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S11_190326131 NA 0 0 0 0 3.449 0.0004 27857720 NA NA t4072.T000483 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S9_252073885 NA 0 0 0 0 3.449 0.0004 27857720 NA NA t4072.T000484 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S9_252073890 NA 0 0 0 0 3.449 0.0004 27857720 NA NA t4072.T000485 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S8_126682716 NA 0 0 0 0 3.73 0.0002 27857720 NA NA t4072.T000486 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S8_126682746 NA 0 0 0 0 3.73 0.0002 27857720 NA NA t4072.T000487 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S10_223493543 NA 0 0 0 0 3.807 0.0002 27857720 NA NA t4072.T000488 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S4_137196865 NA 0 0 0 0 3.864 0.0001 27857720 NA NA t4072.T000489 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S4_137196912 NA 0 0 0 0 3.864 0.0001 27857720 NA NA t4072.T000490 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S11_246730373 NA 0 0 0 0 3.916 0.0001 27857720 NA NA t4072.T000491 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S3_200716267 NA 0 0 0 0 4.173 6.71E−05 27857720 NA NA t4072.T000492 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S11_3937182 NA 0 0 0 0 4.289 5.13E−05 27857720 NA NA t4072.T000493 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S11_190326151 NA 0 0 0 0 4.506 3.12E−05 27857720 NA NA t4072.T000494 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S3_12740983 NA 0 0 0 0 4.653 2.22E−05 27857720 NA NA t4072.T000495 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S2_121116327 NA 0 0 0 0 4.697 2.01E−05 27857720 NA NA t4072.T000496 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S11_725918 NA 0 0 0 0 5.126 7.48E−06 27857720 NA NA t4072.T000497 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S2_134518344 NA 0 0 0 0 5.41 3.89E−06 27857720 NA NA t4072.T000498 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S7_19145046 NA 0 0 0 0 5.947 1.13E−06 27857720 NA NA t4072.T000499 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S7_19145048 NA 0 0 0 0 5.947 1.13E−06 27857720 NA NA t4072.T000500 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S7_19145066 NA 0 0 0 0 5.947 1.13E−06 27857720 NA NA t4072.T000501 4 peduncle length Genome-wide association study (G 377 pepper accessions cultivars and wild accessions S7_19145073 NA 0 0 0 0 5.947 1.13E−06 27857720 NA NA t4072.T000502 PH-2 4 Plant height Composite interval mapping 2012a, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 92.7 - 100.9 4 11.8 10.1093/dnares/dsv038 NA NA t4072.T000503 PH-4 4 Plant height Composite interval mapping 2011, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 96.2 - 102.3 2.6 10 10.1093/dnares/dsv038 NA NA t4072.T000504 PH-6 4 Plant height Composite interval mapping 2011, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 63.2 - 80.2 3.4 11.6 10.1093/dnares/dsv038 NA NA t4072.T000505 PH-8.1 4 Plant height Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 3.8 - 21.1 2.8 8.3 10.1093/dnares/dsv038 NA NA t4072.T000506 PH-8.2 4 Plant height Composite interval mapping 2011, 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 37.2 - 54.8 2.9 8.6 10.1093/dnares/dsv038 NA NA t4072.T000507 PH7 4 Plant height Composite interval mapping 2011, 2012a, 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 77.3 - 90.9 3.4 11.2 10.1093/dnares/dsv038 NA NA t4072.T000508 PW-2 4 Plant width Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 34.5 - 44.9 2.4 8 10.1093/dnares/dsv038 NA NA t4072.T000509 PW-5 4 Plant width Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 33.3 - 41.2 3.6 12.5 10.1093/dnares/dsv038 NA NA t4072.T000510 PWL10 4 Post-harvest water loss (PWL) Composite interval mapping (MQM NIL-F2 BC3F3 population CA10g14490 NA 0 0 CA10g15370 0 0 205834642 - 215887548 16.9 10.1007/s00122-016-2825-9 NA NA t4072.T000511 PWL10.1 4 Post-harvest water loss (PWL) Composite interval mapping (MQM NIL-F2 BC3F3 population CA10g10790 NA 0 0 CA10g11670 0 0 171559796 - 183700251 21.4 10.1007/s00122-016-2825-9 NA NA t4072.T000512 PWL10.1 4 Post-harvest water loss (PWL) Interval maping BC2 Backcross population COSII-At3g08760 NA 0 0 0 0 10.1007/s00122-016-2825-9 NA NA t4072.T000513 PWL10.2 4 Post-harvest water loss (PWL) Composite interval mapping (MQM NIL-F2 BC3F3 population CA10g16510 NA 0 0 CA10g17420 0 0 220169865 - 223170127 10.1007/s00122-016-2825-9 NA NA t4072.T000514 PWL10.2 4 Post-harvest water loss (PWL) Interval maping BC2 Backcross population COSII-At5g01350 NA 0 0 0 0 10.1007/s00122-016-2825-9 NA NA t4072.T000515 PWL5.1 4 Post-harvest water loss (PWL) Interval maping BC2 Backcross population DaRT-457280 NA 0 0 0 0 10.1007/s00122-016-2825-9 NA NA t4072.T000516 STN-10 4 Stamen number Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 99.8 - 102.6 2.8 10.3 10.1093/dnares/dsv038 NA NA t4072.T000517 STN-11 4 Stamen number Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 31 - 36.2 2.3 8.5 10.1093/dnares/dsv038 NA NA t4072.T000518 STN-3 4 Stamen number Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 108.3 - 115.8 2.6 9.8 10.1093/dnares/dsv038 NA NA t4072.T000519 SC-11 4 Stem colour Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 24.3 - 28.9 3.3 11.6 10.1093/dnares/dsv038 NA NA t4072.T000520 SC-12 4 Stem colour Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 61.1 - 71.1 2.8 11.1 10.1093/dnares/dsv038 NA NA t4072.T000521 SC-2 4 Stem colour Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 17.6 - 22.3 3 11.4 10.1093/dnares/dsv038 NA NA t4072.T000522 SC-4 4 Stem colour Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 34.7 - 41 2.6 9.7 10.1093/dnares/dsv038 NA NA t4072.T000523 SC-7 4 Stem colour Composite interval mapping 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 0 - 2.5 3.2 10.4 10.1093/dnares/dsv038 NA NA t4072.T000524 SC-9 4 Stem colour Composite interval mapping 2011, 2012b, 2014 Recombinant inbred lines (RILs) NA 0 0 0 0 51.8 - 59.6 3.4 10.3 10.1093/dnares/dsv038 NA NA t4072.T000525 - 4 Stem pubscence (Stem) Multiple QTL Model (MQM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 29.5 68.4 10.3835/plantgenome2016.12.0125 NA NA t4072.T000526 Stem10.1 4 Stem pubscence (Stem) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 85.6 26.2 56.4 10.3835/plantgenome2016.12.0125 NA NA t4072.T000527 Stem11.1 4 Stem pubscence (Stem) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 19 3.5 4.7 10.3835/plantgenome2016.12.0125 NA NA t4072.T000528 Stem2.1 4 Stem pubscence (Stem) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 62.5 7 10 10.3835/plantgenome2016.12.0125 NA NA t4072.T000529 - 4 Transerverse maximum width (XMW) Multiple QTL Model (MQM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 7.1 29.8 10.3835/plantgenome2016.12.0125 NA NA t4072.T000530 XMW1.1 4 Transerverse maximum width (XMW) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 73.2 3.5 13.4 10.3835/plantgenome2016.12.0125 NA NA t4072.T000531 XMW3.1 4 Transerverse maximum width (XMW) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 142 5.2 20.5 10.3835/plantgenome2016.12.0125 NA NA t4072.T000532 - 4 Transverse area (XA) Multiple QTL Model (MQM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 17 56.8 10.3835/plantgenome2016.12.0125 NA NA t4072.T000533 XA1.1 4 Transverse area (XA) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 72 4.3 10.2 10.3835/plantgenome2016.12.0125 NA NA t4072.T000534 XA10.1 4 Transverse area (XA) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 61 2.3 5.1 10.3835/plantgenome2016.12.0125 NA NA t4072.T000535 XA2.1 4 Transverse area (XA) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 68 4.4 10.6 10.3835/plantgenome2016.12.0125 NA NA t4072.T000536 XA3.1 4 Transverse area (XA) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 139.2 6.6 16.6 10.3835/plantgenome2016.12.0125 NA NA t4072.T000537 XA6.1 4 Transverse area (XA) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 63.1 4.8 11.5 10.3835/plantgenome2016.12.0125 NA NA t4072.T000538 XA8.1 4 Transverse area (XA) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 26.5 3 7 10.3835/plantgenome2016.12.0125 NA NA t4072.T000539 XA9.1 4 Transverse area (XA) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 44 3.7 8.8 10.3835/plantgenome2016.12.0125 NA NA t4072.T000540 - 4 Transverse height midwidth (XHM) Multiple QTL Model (MQM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 13.2 48 10.3835/plantgenome2016.12.0125 NA NA t4072.T000541 XHM1.1 4 Transverse height midwidth (XHM) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 72 5.1 15 10.3835/plantgenome2016.12.0125 NA NA t4072.T000542 XHM2.1 4 Transverse height midwidth (XHM) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 102.4 3.9 11.1 10.3835/plantgenome2016.12.0125 NA NA t4072.T000543 XHM3.1 4 Transverse height midwidth (XHM) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 142 5.7 17 10.3835/plantgenome2016.12.0125 NA NA t4072.T000544 XHM8.1 4 Transverse height midwidth (XHM) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 26.5 3.2 8.8 10.3835/plantgenome2016.12.0125 NA NA t4072.T000545 - 4 Transverse maximum height (XMH) Multiple QTL Model (MQM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 18.9 60.7 10.3835/plantgenome2016.12.0125 NA NA t4072.T000546 XMH1.1 4 Transverse maximum height (XMH) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 73.2 6.9 16 10.3835/plantgenome2016.12.0125 NA NA t4072.T000547 XMH11.1 4 Transverse maximum height (XMH) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 20.3 3.4 7.1 10.3835/plantgenome2016.12.0125 NA NA t4072.T000548 XMH2.1 4 Transverse maximum height (XMH) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 102.4 6.9 15.9 10.3835/plantgenome2016.12.0125 NA NA t4072.T000549 XMH3.1 4 Transverse maximum height (XMH) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 139.2 7.4 17.3 10.3835/plantgenome2016.12.0125 NA NA t4072.T000550 XMH6.1 4 Transverse maximum height (XMH) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 82.2 3.2 6.7 10.3835/plantgenome2016.12.0125 NA NA t4072.T000551 XMH8.1 4 Transverse maximum height (XMH) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 26.5 3.7 7.8 10.3835/plantgenome2016.12.0125 NA NA t4072.T000552 - 4 Transverse perimeter (XP) Multiple QTL Model (MQM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 24.3 69.9 10.3835/plantgenome2016.12.0125 NA NA t4072.T000553 XP1.1 4 Transverse perimeter (XP) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 72 7.4 13.2 10.3835/plantgenome2016.12.0125 NA NA t4072.T000554 XP10.1 4 Transverse perimeter (XP) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 71.8 3.6 5.8 10.3835/plantgenome2016.12.0125 NA NA t4072.T000555 XP11.1 4 Transverse perimeter (XP) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 20.3 5.1 8.7 10.3835/plantgenome2016.12.0125 NA NA t4072.T000556 XP2.1 4 Transverse perimeter (XP) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 72 9.1 17.2 10.3835/plantgenome2016.12.0125 NA NA t4072.T000557 XP3.1 4 Transverse perimeter (XP) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 139.2 11.9 24.2 10.3835/plantgenome2016.12.0125 NA NA t4072.T000558 XP6.1 4 Transverse perimeter (XP) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 63.1 7.4 13.4 10.3835/plantgenome2016.12.0125 NA NA t4072.T000559 XP8.1 4 Transverse perimeter (XP) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 26.5 5.6 9.7 10.3835/plantgenome2016.12.0125 NA NA t4072.T000560 XP9.1 4 Transverse perimeter (XP) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 54.6 4.7 7.8 10.3835/plantgenome2016.12.0125 NA NA t4072.T000561 - 4 Transverse width mid-height (XWM) Multiple QTL Model (MQM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 7 29.3 10.3835/plantgenome2016.12.0125 NA NA t4072.T000562 XWM1.1 4 Transverse width mid-height (XWM) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 73.2 3.4 13 10.3835/plantgenome2016.12.0125 NA NA t4072.T000563 XWM3.1 4 Transverse width mid-height (XWM) Composite interval mapping (CIM) Recombinant Inbred Lines (RILs) Recombinant Inbred Lines (RILs) NA 0 0 0 0 142 5.1 20.4 10.3835/plantgenome2016.12.0125 NA NA t4072.T000564 LA_BG-aCAR1 5 a-carotene Composite interval mapping (CIM) LA RILs F7:9 LA1_1 NA 10 0 11 0 0 - 3.3 4.35 19.4 10.3389/fpls.2022.922963 NA NA t4072.T000565 LA_BG-aCAR10 5 a-carotene Composite interval mapping (CIM) LA RILs F7:9 LA10_24 NA 38 0 193 0 68.8 - 83.3 5.78 31.5 10.3389/fpls.2022.922963 NA NA t4072.T000566 FC17-ASTA4 5 American spice trade association (ASTA) Composite interval mapping (CIM) FC RILs F5:7 FC4_43 NA 0 0 0 0 172.7 - 176.9 3.1 6 10.3389/fpls.2022.922963 NA NA t4072.T000567 FC17-ASTA8.1 5 American spice trade association (ASTA) Composite interval mapping (CIM) FC RILs F5:7 FC8_22 NA 157 0 158 0 72.5 - 78.4 3.3 6.6 10.3389/fpls.2022.922963 NA NA t4072.T000568 FC17-ASTA8.2 5 American spice trade association (ASTA) Composite interval mapping (CIM) FC RILs F5:7 FC8_27 NA 155 0 156 0 83.4 - 91.5 4.5 8.9 10.3389/fpls.2022.922963 NA NA t4072.T000569 LA_BG-ASTA10 5 American spice trade association (ASTA) Composite interval mapping (CIM) LA RILs F7:9 LA10_24 NA 182 0 203 0 76.6 - 84.6 10.36 27.4 10.3389/fpls.2022.922963 NA NA t4072.T000570 FC15-Cap10 5 Capsanthin Composite interval mapping (CIM) FC RILs F5:7 FC10_38 NA 24 0 100 0 68.6 - 82.7 3.2 7.4 10.3389/fpls.2022.922963 NA NA t4072.T000571 LA_BG-CST10 5 Capsanthin Composite interval mapping (CIM) LA RILs F7:9 LA10_18 NA 38 0 58 0 49.4 - 65.7 7.4 20.5 10.3389/fpls.2022.922963 NA NA t4072.T000572 LA_BG-CSB10 5 Capsorubin Composite interval mapping (CIM) LA RILs F7:9 LA10_22 NA 178 0 182 0 71.6 - 76.6 7.29 19.8 10.3389/fpls.2022.922963 NA NA t4072.T000573 Shql3 5 pungency level Composite interval mapping (CIM) F2 population F2 NA 5167786 0 20615780 0 50 - 71 6.96 39.8 10.1007/s00438-022-01975-2 NA NA t4072.T000574 Shql7 5 pungency level Composite interval mapping (CIM) F2 population F2 NA 218675433 0 221842747 0 202 - 225 6.69 19.7 10.1007/s00438-022-01975-2 NA NA t4072.T000575 Pun2_PJ_Gibbs_3.11 5 the capsaicinoid content NA 0 0 0 0 351.8 - 354.1 47.59 0.69 10.3389/fpls.2022.1039393 NA NA t4072.T000576 FC15-tcar10 5 Total carotenoids Composite interval mapping (CIM) FC RILs F5:7 FC10_60 NA 148 0 172 0 107.2 - 126.9 3.5 8.1 10.3389/fpls.2022.922963 NA NA t4072.T000577 FC15-tcar8 5 Total carotenoids Composite interval mapping (CIM) FC RILs F5:7 FC8_15 NA 152 0 165 0 47 - 61.8 3.5 7.7 10.3389/fpls.2022.922963 NA NA t4072.T000578 B1 1 Anthracnose resitance (C. capsici, true lesion diameter) MAPQTL 4.0, Kruskal-Wallis, Inte Mapping population F2 NA 0 0 0 0 3.89 10.1007/s00122-004-1738-1 NA NA t4072.T000579 G1 1 Anthracnose resitance (C. capsici, true lesion diameter) MAPQTL 4.0, Kruskal-Wallis, Inte Mapping population F2 NA 0 0 0 0 2.84 10.1007/s00122-004-1738-1 NA NA t4072.T000580 B1 1 Anthracnose resitance (C. gloeosporioides, infection frequency) MAPQTL 4.0, Kruskal-Wallis, Inte Mapping population F2 NA 0 0 0 0 7.47 10.1007/s00122-004-1738-1 NA NA t4072.T000581 B2 1 Anthracnose resitance (C. gloeosporioides, infection frequency) MAPQTL 4.0, Kruskal-Wallis, Inte Mapping population F2 NA 0 0 0 0 3.33 10.1007/s00122-004-1738-1 NA NA t4072.T000582 H1 1 Anthracnose resitance (C. gloeosporioides, infection frequency) MAPQTL 4.0, Kruskal-Wallis, Inte Mapping population F2 NA 0 0 0 0 2.92 10.1007/s00122-004-1738-1 NA NA t4072.T000583 B1 1 Anthracnose resitance (C. gloeosporioides, overall lesion diameter) MAPQTL 4.0, Kruskal-Wallis, Inte Mapping population F2 NA 0 0 0 0 9.29 10.1007/s00122-004-1738-1 NA NA t4072.T000584 B2 1 Anthracnose resitance (C. gloeosporioides, overall lesion diameter) MAPQTL 4.0, Kruskal-Wallis, Inte Mapping population F2 NA 0 0 0 0 4.67 10.1007/s00122-004-1738-1 NA NA t4072.T000585 D1 1 Anthracnose resitance (C. gloeosporioides, overall lesion diameter) MAPQTL 4.0, Kruskal-Wallis, Inte Mapping population F2 NA 0 0 0 0 2.71 10.1007/s00122-004-1738-1 NA NA t4072.T000586 H1 1 Anthracnose resitance (C. gloeosporioides, overall lesion diameter) MAPQTL 4.0, Kruskal-Wallis, Inte Mapping population F2 NA 0 0 0 0 3.74 10.1007/s00122-004-1738-1 NA NA t4072.T000587 B1 1 Anthracnose resitance (C. gloeosporioides, true lesion diameter) MAPQTL 4.0, Kruskal-Wallis, Inte Mapping population F2 NA 0 0 0 0 4.92 10.1007/s00122-004-1738-1 NA NA t4072.T000588 B2 1 Anthracnose resitance (C. gloeosporioides, true lesion diameter) MAPQTL 4.0, Kruskal-Wallis, Inte Mapping population F2 NA 0 0 0 0 2.72 10.1007/s00122-004-1738-1 NA NA t4072.T000589 D1 1 Anthracnose resitance (C. gloeosporioides, true lesion diameter) MAPQTL 4.0, Kruskal-Wallis, Inte Mapping population F2 NA 0 0 0 0 4.59 10.1007/s00122-004-1738-1 NA NA t4072.T000590 H1 1 Anthracnose resitance (C. gloeosporioides, true lesion diameter) MAPQTL 4.0, Kruskal-Wallis, Inte Mapping population F2 NA 0 0 0 0 3.03 10.1007/s00122-004-1738-1 NA NA