t3818.T000001 cp1 1 cp, resistance to C. personatum (late leaf spot disease resistance) QTL analysis A. duranensis (K7988) x A. stenosperma (V10309) F2 Leg034 NA NA 0 0 NA 0 0 328.4 11.8 10.1186/1471-2229-9-112 NA NA t3818.T000002 cp2 1 cp, resistance to C. personatum (late leaf spot disease resistance) QTL analysis A. duranensis (K7988) x A. stenosperma (V10309) F2 AdH8A NA NA 0 0 NA 0 0 226.7 11.9 10.1186/1471-2229-9-112 NA NA t3818.T000003 cp4.1 1 cp, resistance to C. personatum (late leaf spot disease resistance) QTL analysis A. duranensis (K7988) x A. stenosperma (V10309) F2 Hs1125R/E11 NA NA 0 0 Y2017F/M11 NA 0 0 106.4 14.1 10.1186/1471-2229-9-112 NA NA t3818.T000004 cp4.2 1 cp, resistance to C. personatum (late leaf spot disease resistance) QTL analysis A. duranensis (K7988) x A. stenosperma (V10309) F2 RN5H02 Tifrunner.gnm1.KYV3 arahy.Tifrunner.gnm1.Arahy.04 102722262 102722462 TC9E08 NA 0 0 165.4 17.3 10.1186/1471-2229-9-112 t3818.M014442.1 t3818.M015021.1 t3818.T000005 cp6 1 cp, resistance to C. personatum (late leaf spot disease resistance) QTL analysis A. duranensis (K7988) x A. stenosperma (V10309) F2 Leg346 NA NA 0 0 NA 0 0 81.5 12.3 10.1186/1471-2229-9-112 t3818.M013803.1 NA t3818.T000006 J3K16K 4 testa color QTL-seq KF1 F2 pTesta1089 NA 0 0 pTesta1106 0 0 Arahy.10:108900285 - Arahy.10:11 10.1111/pbi.13175 NA NA t3818.T000007 q12DAI_S1B06.1 1 Wilting(%) of plant recorded at 12 days after inoculation (12 DAI) Composite interval mapping (CIM) S1 RILs S16_126812379 NA 0 0 S16_134339084 0 0 3.5 8.4 10.1007/s00122-018-3255-7 NA NA t3818.T000008 q12DAI_S3B04.2 1 Wilting(%) of plant recorded at 12 days after inoculation (12 DAI) Inculusive composite interval ma S3 RILs S14_103838285 NA 0 0 S14_109137568 0 0 3.6 5.5 10.1007/s00122-018-3255-7 NA NA t3818.T000009 q12DAI_S3B10.3 1 Wilting(%) of plant recorded at 12 days after inoculation (12 DAI) Inculusive composite interval ma S3 RILs S20_127503069 NA 0 0 S20_14425894 0 0 3.2 6.3 10.1007/s00122-018-3255-7 NA NA t3818.T000010 q6DAI_S2B03.1 1 Wilting(%) of plant recorded at 6 days after inoculation (6 DAI) Composite interval mapping (CIM) S2 RILs S13_8258337 NA 0 0 S13_11316796 0 0 4.2 6.7 10.1007/s00122-018-3255-7 NA NA t3818.T000011 q6DAI_S3B04.2 1 Wilting(%) of plant recorded at 6 days after inoculation (6 DAI) Composite interval mapping (CIM) S3 RILs S14_103838285 NA 0 0 S14_109137568 0 0 3.1 5 10.1007/s00122-018-3255-7 NA NA t3818.T000012 q9DAI_S1B08.1 1 Wilting(%) of plant recorded at 9 days after inoculation (9 DAI) Composite interval mapping (CIM) S1 RILs S18_113539069 NA 0 0 S18_49660038 0 0 4.3 7 10.1007/s00122-018-3255-7 NA NA t3818.T000013 q9DAI_S3B10.2 1 Wilting(%) of plant recorded at 9 days after inoculation (9 DAI) Composite interval mapping (CIM) S3 RILs S20_62052887 NA 0 0 S20_95957766 0 0 5.4 8.5 10.1007/s00122-018-3255-7 NA NA t3818.T000014 qHRN_S1A01.1 4 Root hairiness (HRN) Composite interval mapping (CIM) S1 RILs S1_9530252 NA 0 0 S1_6936082 0 0 3.3 6.5 10.1007/s00122-018-3255-7 NA NA t3818.T000015 qHRN_S1B09.3 4 Root hairiness (HRN) Inculusive composite interval ma S1 RILs S19_141233870 NA 0 0 S19_4467306 0 0 6 54.4 10.1007/s00122-018-3255-7 NA NA t3818.T000016 qHRN_S2B09.4 4 Root hairiness (HRN) Inculusive composite interval ma S2 RILs S19_141233870 NA 0 0 S19_4467306 0 0 5.1 54.1 10.1007/s00122-018-3255-7 NA NA t3818.T000017 qLS_S1A01.1 4 Leaf shape (LS) Composite interval mapping (CIM) S1 RILs S1_82874814 NA 0 0 S1_89256537 0 0 3.2 4.9 10.1007/s00122-018-3255-7 NA NA t3818.T000018 qLS_S1A01.2 4 Leaf shape (LS) Inculusive composite interval ma S1 RILs S1_82874814 NA 0 0 S1_89256537 0 0 12.2 20.6 10.1007/s00122-018-3255-7 NA NA t3818.T000019 qNPB_S2A06.1 4 Number of primary branches (NPB) Composite interval mapping (CIM) S2 RILs S6_83876842 NA 0 0 S6_2770531 0 0 3.6 6 10.1007/s00122-018-3255-7 NA NA t3818.T000020 qNSB_S2A06.1 4 Number of secondary branches (NSB) Composite interval mapping (CIM) S2 RILs S6_83876842 NA 0 0 S6_2770531 0 0 3.3 10.3 10.1007/s00122-018-3255-7 NA NA t3818.T000021 qPH_S1A10.1 4 Plant height (PH) Composite interval mapping (CIM) S1 RILs S10_18160081 NA 0 0 S10_16903283 0 0 3.4 6.5 10.1007/s00122-018-3255-7 NA NA t3818.T000022 qPL_S1B07.1 4 Pod length (PL) Composite interval mapping (CIM) S1 RILs S17_68870700 NA 0 0 S17_65719160 0 0 4.2 7.3 10.1007/s00122-018-3255-7 NA NA t3818.T000023 qSP_S1A09.1 4 Shelling percentage (SP) Inculusive composite interval ma S1 RILs S9_90565863 NA 0 0 S9_108801949 0 0 3.8 6.3 10.1007/s00122-018-3255-7 NA NA t3818.T000024 qSP_S1B07.2 4 Shelling percentage (SP) Composite interval mapping (CIM) S1 RILs S17_17834940 NA 0 0 S17_26195616 0 0 3.7 9.2 10.1007/s00122-018-3255-7 NA NA t3818.T000025 qSP_S1B06.3 4 Shelling percentage (SP) Inculusive composite interval ma S1 RILs S16_14446457 NA 0 0 S16_14373891 0 0 3.4 5.7 10.1007/s00122-018-3255-7 NA NA t3818.T000026 qSW_S1B09.1 4 Seed weight (SW) Composite interval mapping (CIM) S1 RILs S19_141991194 NA 0 0 S19_141233870 0 0 4 6.6 10.1007/s00122-018-3255-7 NA NA t3818.T000027 VPC 4 Visually assessed pod constriction (VPC) General linear model (GLM) RILs-GLM Recombinant Inbred lines (RILs) AX176817995 NA 0 0 AX176803520 0 0 16412296 - 102224525 6.2e-16 10.1186/s12863-018-0674-z NA NA t3818.T000028 PCI 4 Mean pod constriction index (PCI) General linear model (GLM) RILs-GLM Recombinant Inbred lines (RILs) AX176806530 NA 0 0 AX176817885 0 0 30845972 - 122260525 1.6e-14 10.1186/s12863-018-0674-z NA NA t3818.T000029 5 Oil Content Genome-wide association study (G 2016QD1 49 Accessions InDel1131 NA 0 0 0 0 34495950 0.00036 10.1007/s11105-018-1088-9 NA NA t3818.T000030 5 Oil Content Genome-wide association study (G BLUP 49 Accessions InDel1131 NA 0 0 0 0 34495950 0.00019 10.1007/s11105-018-1088-9 NA NA t3818.T000031 5 Oil Content Genome-wide association study (G 2015QD 49 Accessions InDel1542 NA 0 0 0 0 87356428 4.66e-05 10.1007/s11105-018-1088-9 NA NA t3818.T000032 5 Oil Content Genome-wide association study (G 2016QD2 49 Accessions InDel1706 NA 0 0 0 0 90271821 9.48e-05 10.1007/s11105-018-1088-9 NA NA t3818.T000033 5 Oil Content Genome-wide association study (G 2016QD2 49 Accessions InDel2037 NA 0 0 0 0 95486898 6.57e-05 10.1007/s11105-018-1088-9 NA NA t3818.T000034 5 Oil Content Genome-wide association study (G BLUP 49 Accessions InDel2037 NA 0 0 0 0 95486898 0.000356 10.1007/s11105-018-1088-9 NA NA t3818.T000035 5 Oil Content Genome-wide association study (G 2016QD2 49 Accessions InDel4191 NA 0 0 0 0 78425052 0.000156 10.1007/s11105-018-1088-9 NA NA t3818.T000036 5 Oil Content Genome-wide association study (G BLUP 49 Accessions InDel4191 NA 0 0 0 0 78425052 0.000467 10.1007/s11105-018-1088-9 NA NA t3818.T000037 5 Oil Content Genome-wide association study (G 2016QD1 49 Accessions InDel5040 NA 0 0 0 0 491125 0.000664 10.1007/s11105-018-1088-9 NA NA t3818.T000038 5 Oil Content Genome-wide association study (G 2016LX 49 Accessions InDel5700 NA 0 0 0 0 8819086 0.000374 10.1007/s11105-018-1088-9 NA NA t3818.T000039 5 Oil Content Genome-wide association study (G 2016QD2 49 Accessions InDel6418 NA 0 0 0 0 25151910 0.000128 10.1007/s11105-018-1088-9 NA NA t3818.T000040 5 Oil Content Genome-wide association study (G 2016QD1 49 Accessions InDel6418 NA 0 0 0 0 25151910 0.000517 10.1007/s11105-018-1088-9 NA NA t3818.T000041 5 Oil Content Genome-wide association study (G BLUP 49 Accessions InDel6418 NA 0 0 0 0 25151910 9.55e-05 10.1007/s11105-018-1088-9 NA NA t3818.T000042 5 Oil Content Genome-wide association study (G 2016QD2 49 Accessions InDel9216 NA 0 0 0 0 296696 3.47e-05 10.1007/s11105-018-1088-9 NA NA t3818.T000043 5 Oil Content Genome-wide association study (G 2015QD 49 Accessions InDel10523 NA 0 0 0 0 60457589 1.3e-05 10.1007/s11105-018-1088-9 NA NA t3818.T000044 5 Oil Content Genome-wide association study (G 2016LX 49 Accessions InDel12009 NA 0 0 0 0 2137027 0.000418 10.1007/s11105-018-1088-9 NA NA t3818.T000045 5 Oil Content Genome-wide association study (G 2015QD 49 Accessions InDel13077 NA 0 0 0 0 23669946 4.26e-05 10.1007/s11105-018-1088-9 NA NA t3818.T000046 5 Oil Content Genome-wide association study (G 2015QD 49 Accessions InDel15957 NA 0 0 0 0 14054256 4.26e-05 10.1007/s11105-018-1088-9 NA NA t3818.T000047 5 Oil Content Genome-wide association study (G 2015QD 49 Accessions InDel16200 NA 0 0 0 0 19788220 4.66e-05 10.1007/s11105-018-1088-9 NA NA t3818.T000048 5 Oil Content Genome-wide association study (G 2016QD1 49 Accessions InDel16859 NA 0 0 0 0 88260062 0.000654 10.1007/s11105-018-1088-9 NA NA t3818.T000049 5 Oil Content Genome-wide association study (G 2016QD2 49 Accessions InDel19295 NA 0 0 0 0 41424269 0.000276 10.1007/s11105-018-1088-9 NA NA t3818.T000050 5 Oil Content Genome-wide association study (G 2016QD1 49 Accessions InDel19601 NA 0 0 0 0 61207224 0.000264 10.1007/s11105-018-1088-9 NA NA t3818.T000051 5 Oil Content Genome-wide association study (G BLUP 49 Accessions InDel19601 NA 0 0 0 0 61207224 0.000499 10.1007/s11105-018-1088-9 NA NA t3818.T000052 5 Oil Content Genome-wide association study (G 2016QD1 49 Accessions InDel21696 NA 0 0 0 0 30838257 0.000544 10.1007/s11105-018-1088-9 NA NA t3818.T000053 5 Oil Content Genome-wide association study (G 2015QD 49 Accessions InDel22317 NA 0 0 0 0 42061010 1.98e-05 10.1007/s11105-018-1088-9 NA NA t3818.T000054 5 Oil Content Genome-wide association study (G 2015QD 49 Accessions InDel23061 NA 0 0 0 0 2035680 3.24e-05 10.1007/s11105-018-1088-9 NA NA t3818.T000055 5 Oil Content Genome-wide association study (G 2015QD 49 Accessions InDel23454 NA 0 0 0 0 9583583 9.33e-05 10.1007/s11105-018-1088-9 NA NA t3818.T000056 5 Oil Content Genome-wide association study (G 2015QD 49 Accessions InDel24098 NA 0 0 0 0 53956083 4.6e-05 10.1007/s11105-018-1088-9 NA NA t3818.T000057 5 Oil Content Genome-wide association study (G 2015QD 49 Accessions InDel24739 NA 0 0 0 0 104813695 4.26e-05 10.1007/s11105-018-1088-9 NA NA t3818.T000058 5 Oil Content Genome-wide association study (G 2015QD 49 Accessions InDel30694 NA 0 0 0 0 130615990 4.66e-05 10.1007/s11105-018-1088-9 NA NA t3818.T000059 5 Oil Content Genome-wide association study (G 2015QD 49 Accessions InDel31001 NA 0 0 0 0 134729157 4.26e-05 10.1007/s11105-018-1088-9 NA NA t3818.T000060 5 Oil Content Genome-wide association study (G 2016LX 49 Accessions InDel33398 NA 0 0 0 0 98604074 8.77e-05 10.1007/s11105-018-1088-9 NA NA t3818.T000061 5 Oil Content Genome-wide association study (G 2016QD2 49 Accessions InDel34392 NA 0 0 0 0 2753408 0.000227 10.1007/s11105-018-1088-9 NA NA t3818.T000062 5 Oil Content Genome-wide association study (G 2016LX 49 Accessions InDel40116 NA 0 0 0 0 21814602 0.000215 10.1007/s11105-018-1088-9 NA NA t3818.T000063 5 Oil Content Genome-wide association study (G 2015QD 49 Accessions InDel41520 NA 0 0 0 0 125079948 4.26e-05 10.1007/s11105-018-1088-9 NA NA t3818.T000064 5 Oil Content Genome-wide association study (G 2015QD 49 Accessions InDel41661 NA 0 0 0 0 127849985 4.26e-05 10.1007/s11105-018-1088-9 NA NA t3818.T000065 5 Oil Content Genome-wide association study (G 2015QD 49 Accessions InDel42302 NA 0 0 0 0 2828011 4.66e-05 10.1007/s11105-018-1088-9 NA NA t3818.T000066 5 Oil Content Genome-wide association study (G 2015QD 49 Accessions InDel42376 NA 0 0 0 0 3795502 5.48e-05 10.1007/s11105-018-1088-9 NA NA t3818.T000067 5 Oil Content Genome-wide association study (G 2015QD 49 Accessions InDel44583 NA 0 0 0 0 126779808 3.54e-05 10.1007/s11105-018-1088-9 NA NA t3818.T000068 5 Oil Content Genome-wide association study (G 2016QD2 49 Accessions InDel45522 NA 0 0 0 0 146196585 0.000311 10.1007/s11105-018-1088-9 NA NA t3818.T000069 5 Oil Content Genome-wide association study (G 2016QD1 49 Accessions InDel47632 NA 0 0 0 0 71556073 0.000633 10.1007/s11105-018-1088-9 NA NA t3818.T000070 5 Oil Content Genome-wide association study (G 2016QD1 49 Accessions InDel51319 NA 0 0 0 0 98647041 0.00038 10.1007/s11105-018-1088-9 NA NA t3818.T000071 5 Oil Content Genome-wide association study (G 2016QD1 49 Accessions InDel51475 NA 0 0 0 0 105525017 0.000599 10.1007/s11105-018-1088-9 NA NA t3818.T000072 5 Oil Content Genome-wide association study (G 2015QD 49 Accessions InDel53828 NA 0 0 0 0 33400604 8.56e-05 10.1007/s11105-018-1088-9 NA NA t3818.T000073 5 Oil Content Genome-wide association study (G 2016LX 49 Accessions InDel53828 NA 0 0 0 0 33400604 0.000524 10.1007/s11105-018-1088-9 NA NA t3818.T000074 5 Oil Content Genome-wide association study (G BLUP 49 Accessions InDel53828 NA 0 0 0 0 33400604 0.000228 10.1007/s11105-018-1088-9 NA NA t3818.T000075 5 Oil Content Genome-wide association study (G 2016QD1 49 Accessions InDel54171 NA 0 0 0 0 87754293 0.000556 10.1007/s11105-018-1088-9 NA NA t3818.T000076 5 Oil Content Genome-wide association study (G 2015QD 49 Accessions InDel60380 NA 0 0 0 0 94138008 4.66e-05 10.1007/s11105-018-1088-9 NA NA t3818.T000077 qPHA06.1 3 Plant height (PH) Composite interval mapping (CIM) WuH16 Recombinant inbred line (RILs) AhSNP6568422 NA 0 0 AhSNP6794628 0 0 42.8 - 46 3.02 5.07 10.3389/fpls.2018.00827 NA NA t3818.T000078 qPHA06.2 3 Plant height (PH) Composite interval mapping (CIM) YangL16 Recombinant inbred line (RILs) AhIndel6843531 NA 0 0 AhSNP6568422 0 0 37.3 - 40.1 3.8 6.1 10.3389/fpls.2018.00827 NA NA t3818.T000079 qPHB06 3 Plant height (PH) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhSNP15357423 NA 0 0 AhSNP14573470 0 0 42.3 - 43.4 4.34 7.03 10.3389/fpls.2018.00827 NA NA t3818.T000080 qPHB07.1 3 Plant height (PH) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhSNP7791819 NA 0 0 AhSNP7702639 0 0 48.6 - 49.5 2.53 4.3 10.3389/fpls.2018.00827 NA NA t3818.T000081 qPHB07.2 3 Plant height (PH) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhSNP7779427 NA 0 0 AhSNP8072443 0 0 54.7 - 57 3.59 6.04 10.3389/fpls.2018.00827 NA NA t3818.T000082 qLBLA06 3 Lateral branch length (LBL) Composite interval mapping (CIM) WuH16 Recombinant inbred line (RILs) AhSNP7140384 NA 0 0 AhSNP6794628 0 0 41.1 - 46 2.71 4.45 10.3389/fpls.2018.00827 NA NA t3818.T000083 qLBLB07.1 3 Lateral branch length (LBL) Composite interval mapping (CIM) YangL16 Recombinant inbred line (RILs) AhSNP8202839 NA 0 0 AhSNP7885526 0 0 71.3 - 71.8 2.56 4.47 10.3389/fpls.2018.00827 NA NA t3818.T000084 qLBLB07.2 3 Lateral branch length (LBL) Composite interval mapping (CIM) YangL16 Recombinant inbred line (RILs) AhSNP8113916 NA 0 0 AhIndel8431318 0 0 80.1 - 82 2.53 4.43 10.3389/fpls.2018.00827 NA NA t3818.T000085 qTBNA06 3 Total branch number (TBN) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhIndel7054692 NA 0 0 AhSNP6850752 0 0 10.4 - 14.4 4.38 7.16 10.3389/fpls.2018.00827 NA NA t3818.T000086 qTBNA10 3 Total branch number (TBN) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhSNP12677062 NA 0 0 AhSNP12927391 0 0 10.9 - 15 3.19 5.12 10.3389/fpls.2018.00827 NA NA t3818.T000087 qTBNB01 3 Total branch number (TBN) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhSNP6125629 NA 0 0 AhSNP5781856 0 0 68.7 - 74 2.79 4.45 10.3389/fpls.2018.00827 NA NA t3818.T000088 qTBNB10 3 Total branch number (TBN) Composite interval mapping (CIM) WuH16 Recombinant inbred line (RILs) AhSNP945679 NA 0 0 AhSNP834777 0 0 0 - 6 4.09 6.57 10.3389/fpls.2018.00827 NA NA t3818.T000089 qFBNA01 3 Fruiting branch number (FBN) Composite interval mapping (CIM) WuH16 Recombinant inbred line (RILs) AhSNP12141017 NA 0 0 AhSNP11610128 0 0 17.3 - 30.3 2.85 6.12 10.3389/fpls.2018.00827 NA NA t3818.T000090 qFBNA06.1 3 Fruiting branch number (FBN) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhIndel7054692 NA 0 0 AhSNP6850752 0 0 10.2 - 11.3 3.73 6.26 10.3389/fpls.2018.00827 NA NA t3818.T000091 qFBNA06.2 3 Fruiting branch number (FBN) Composite interval mapping (CIM) WuH16 Recombinant inbred line (RILs) AhSNP6677580 NA 0 0 AhSNP7159472 0 0 0 - 3.1 2.73 4.4 10.3389/fpls.2018.00827 NA NA t3818.T000092 qFBNB01 3 Fruiting branch number (FBN) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhSNP5837940 NA 0 0 AhSNP6093023 0 0 67.5 - 70.6 3.97 6.61 10.3389/fpls.2018.00827 NA NA t3818.T000093 qFBNB09 3 Fruiting branch number (FBN) Composite interval mapping (CIM) WuH16 Recombinant inbred line (RILs) AhSNP2644292 NA 0 0 AhIndel2712399 0 0 64.6 - 67.9 2.7 4.32 10.3389/fpls.2018.00827 NA NA t3818.T000094 qINNA05 3 Internod number (IN) Composite interval mapping (CIM) YangL16 Recombinant inbred line (RILs) AhSNP2324857 NA 0 0 AhSNP2139010 0 0 77.3 - 78.9 2.88 4.85 10.3389/fpls.2018.00827 NA NA t3818.T000095 qINNB02 3 Internod number (IN) Composite interval mapping (CIM) WuH16 Recombinant inbred line (RILs) AhSNP14395471 NA 0 0 AhSNP14388597 0 0 0.9 - 4.4 2.6 4.24 10.3389/fpls.2018.00827 NA NA t3818.T000096 qINNB04 3 Internod number (IN) Composite interval mapping (CIM) WuH16 Recombinant inbred line (RILs) AhIndel10025925 NA 0 0 AhSNP10598525 0 0 42.8 - 44.6 2.56 4.17 10.3389/fpls.2018.00827 NA NA t3818.T000097 qINNB08 3 Internod number (IN) Composite interval mapping (CIM) WuH16 Recombinant inbred line (RILs) AhSNP4532078 NA 0 0 AhIndel4487699 0 0 24.8 - 27.9 2.86 4.66 10.3389/fpls.2018.00827 NA NA t3818.T000098 qPLB06.1 3 Pod length (PL) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhSNP15007648 NA 0 0 AhSNP14973104 0 0 131.9 - 133.2 11.6 18.99 10.3389/fpls.2018.00827 NA NA t3818.T000099 qPLB06.2 3 Pod length (PL) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhSNP15460609 NA 0 0 AhSNP15112056 0 0 138.9 - 140 8.16 16.78 10.3389/fpls.2018.00827 NA NA t3818.T000100 qPLB08 3 Pod length (PL) Composite interval mapping (CIM) WuH16 Recombinant inbred line (RILs) AhSNP3749179 NA 0 0 AhSNP4485440 0 0 94 - 100.4 2.53 4.3 10.3389/fpls.2018.00827 NA NA t3818.T000101 qPWB06.1 3 Pod width (PW) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhSNP14709329 NA 0 0 AhSNP15163391 0 0 124.3 - 125.7 7.8 15.94 10.3389/fpls.2018.00827 NA NA t3818.T000102 qPWB06.2 3 Pod width (PW) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhSNP15007648 NA 0 0 AhSNP15057182 0 0 131.4 - 134.5 8.57 17.09 10.3389/fpls.2018.00827 NA NA t3818.T000103 qPWB06.3 3 Pod width (PW) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhSNP14591706 NA 0 0 AhSNP14894764 0 0 138.5 - 142.4 7.11 14.89 10.3389/fpls.2018.00827 NA NA t3818.T000104 qPWB07.1 3 Pod width (PW) Composite interval mapping (CIM) YangL16 Recombinant inbred line (RILs) AhSNP8362338 NA 0 0 AhSNP8048484 0 0 127.7 - 134.3 7.55 15.07 10.3389/fpls.2018.00827 NA NA t3818.T000105 qPWB07.2 3 Pod width (PW) Composite interval mapping (CIM) WuH16 Recombinant inbred line (RILs) AhSNP8505759 NA 0 0 AhSNP7755889 0 0 134.6 - 142.8 6.8 14.57 10.3389/fpls.2018.00827 NA NA t3818.T000106 qPWB07.3 3 Pod width (PW) Composite interval mapping (CIM) YangL16 Recombinant inbred line (RILs) AhSNP8505759 NA 0 0 AhSNP7755889 0 0 135.4 - 142.8 7.37 15.65 10.3389/fpls.2018.00827 NA NA t3818.T000107 qSLA03 3 Seed length (SL) Composite interval mapping (CIM) YangL16 Recombinant inbred line (RILs) AhSNP1417767 NA 0 0 AhSNP1217642 0 0 0 - 3.5 3.34 5.48 10.3389/fpls.2018.00827 NA NA t3818.T000108 qSLA04.1 3 Seed length (SL) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhSNP13558548 NA 0 0 AhSNP13394128 0 0 24.9 - 27.8 2.5 4.03 10.3389/fpls.2018.00827 NA NA t3818.T000109 qSLA04.2 3 Seed length (SL) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhSNP13308355 NA 0 0 AhSNP13357771 0 0 37.6 - 39.9 3.49 5.56 10.3389/fpls.2018.00827 NA NA t3818.T000110 qSLA06 3 Seed length (SL) Composite interval mapping (CIM) WuH16 Recombinant inbred line (RILs) AhSNP6974142 NA 0 0 AhSNP6816914 0 0 4.3 - 5.7 3.12 4.84 10.3389/fpls.2018.00827 NA NA t3818.T000111 qSLB06.1 3 Seed length (SL) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhSNP14947934 NA 0 0 AhSNP15443760 0 0 121.5 - 124 7.87 16.91 10.3389/fpls.2018.00827 NA NA t3818.T000112 qSLB06.2 3 Seed length (SL) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhSNP15007648 NA 0 0 AhSNP14973104 0 0 131.6 - 133.4 8.91 17.9 10.3389/fpls.2018.00827 NA NA t3818.T000113 qSLB06.3 3 Seed length (SL) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhSNP14732062 NA 0 0 AhSNP15202567 0 0 139.3 - 141 7.66 15.96 10.3389/fpls.2018.00827 NA NA t3818.T000114 qSLB07.1 3 Seed length (SL) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhSNP8444006 NA 0 0 AhSNP8048484 0 0 131.2 - 139.8 7.04 14.98 10.3389/fpls.2018.00827 NA NA t3818.T000115 qSLB07.2 3 Seed length (SL) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhSNP8505759 NA 0 0 AhSNP8338430 0 0 139.8 - 143.9 7.17 14.41 10.3389/fpls.2018.00827 NA NA t3818.T000116 qSLB07.3 3 Seed length (SL) Composite interval mapping (CIM) WuH16 Recombinant inbred line (RILs) AhSNP8505759 NA 0 0 AhSNP7755889 0 0 139.3 - 142.9 10.88 18.21 10.3389/fpls.2018.00827 NA NA t3818.T000117 qSLB07.4 3 Seed length (SL) Composite interval mapping (CIM) YangL16 Recombinant inbred line (RILs) AhSNP8505759 NA 0 0 AhSNP8048484 0 0 136.3 - 139.8 7.53 15.75 10.3389/fpls.2018.00827 NA NA t3818.T000118 qSLB08 3 Seed length (SL) Composite interval mapping (CIM) WuH16 Recombinant inbred line (RILs) AhSNP3749179 NA 0 0 AhSNP3709171 0 0 94.6 - 102.1 2.55 4.05 10.3389/fpls.2018.00827 NA NA t3818.T000119 qSWB07.1 3 Seed width (SW) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhSNP8444006 NA 0 0 AhSNP8048484 0 0 130.9 - 138.3 7.53 15.55 10.3389/fpls.2018.00827 NA NA t3818.T000120 qSWB07.2 3 Seed width (SW) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhSNP8505759 NA 0 0 AhSNP7755889 0 0 138.3 - 142.9 7.27 15.58 10.3389/fpls.2018.00827 NA NA t3818.T000121 qSWB07.3 3 Seed width (SW) Composite interval mapping (CIM) WuH16 Recombinant inbred line (RILs) AhSNP8505759 NA 0 0 AhSNP8048484 0 0 136 - 141.8 7.58 15.43 10.3389/fpls.2018.00827 NA NA t3818.T000122 qSWB07.4 3 Seed width (SW) Composite interval mapping (CIM) YangL16 Recombinant inbred line (RILs) AhSNP8505759 NA 0 0 AhSNP7755889 0 0 135.9 - 142.9 7.97 15.06 10.3389/fpls.2018.00827 NA NA t3818.T000123 qHPWB02 3 Hundred-pod weight (HPW) Composite interval mapping (CIM) YangL16 Recombinant inbred line (RILs) AhSNP13792358 NA 0 0 AhSNP14028184 0 0 44.9 - 46 3.47 5.86 10.3389/fpls.2018.00827 NA NA t3818.T000124 qHPWB06 3 Hundred-pod weight (HPW) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhSNP14871490 NA 0 0 AhSNP15057182 0 0 129.8 - 134.6 7.22 14.46 10.3389/fpls.2018.00827 NA NA t3818.T000125 qHSWA03 3 Hundred-seed weight (HSW) Composite interval mapping (CIM) YangL16 Recombinant inbred line (RILs) AhSNP1417767 NA 0 0 AhSNP1217642 0 0 0 - 3.3 3.13 5.17 10.3389/fpls.2018.00827 NA NA t3818.T000126 qHSWB06.1 3 Hundred-seed weight (HSW) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhSNP15443760 NA 0 0 AhSNP15128876 0 0 124.3 - 125.7 8.75 17.95 10.3389/fpls.2018.00827 NA NA t3818.T000127 qHSWB06.2 3 Hundred-seed weight (HSW) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhSNP15007648 NA 0 0 AhSNP15057182 0 0 131.4 - 134.6 7.9 16.5 10.3389/fpls.2018.00827 NA NA t3818.T000128 qHSWB07.1 3 Hundred-seed weight (HSW) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhSNP8505759 NA 0 0 AhSNP7755889 0 0 133.9 - 142.9 7.54 15.92 10.3389/fpls.2018.00827 NA NA t3818.T000129 qHSWB07.2 3 Hundred-seed weight (HSW) Composite interval mapping (CIM) WuH16 Recombinant inbred line (RILs) AhSNP8505759 NA 0 0 AhSNP7755889 0 0 136.5 - 142.8 7.81 16.72 10.3389/fpls.2018.00827 NA NA t3818.T000130 qHSWB08 3 Hundred-seed weight (HSW) Composite interval mapping (CIM) WuH16 Recombinant inbred line (RILs) AhSNP4204715 NA 0 0 AhSNP3996377 0 0 98.5 - 102.6 3.9 6.31 10.3389/fpls.2018.00827 NA NA t3818.T000131 qLWRPB08 3 Length-width ratio of pod (LWRP) Composite interval mapping (CIM) YangL16 Recombinant inbred line (RILs) AhSNP4122007 NA 0 0 AhSNP4048068 0 0 78.8 - 81.9 2.88 4.93 10.3389/fpls.2018.00827 NA NA t3818.T000132 qLWRPB10.1 3 Length-width ratio of pod (LWRP) Composite interval mapping (CIM) WuH16 Recombinant inbred line (RILs) AhSNP669219 NA 0 0 AhSNP214780 0 0 53.8 - 55.4 2.89 4.99 10.3389/fpls.2018.00827 NA NA t3818.T000133 qLWRPB10.2 3 Length-width ratio of pod (LWRP) Composite interval mapping (CIM) WuH16 Recombinant inbred line (RILs) AhSNP353647 NA 0 0 AhSNP310250 0 0 81 - 84.3 2.6 4.28 10.3389/fpls.2018.00827 NA NA t3818.T000134 qLWRPB10.3 3 Length-width ratio of pod (LWRP) Composite interval mapping (CIM) WuH16 Recombinant inbred line (RILs) AhSNP526110 NA 0 0 AhSNP633440 0 0 87.2 - 93.6 2.54 4.18 10.3389/fpls.2018.00827 NA NA t3818.T000135 qLWRSB02.1 3 Length-width ratio of seed (LWRS) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhSNP13769754 NA 0 0 AhSNP13888121 0 0 7 - 9.2 2.59 4.5 10.3389/fpls.2018.00827 NA NA t3818.T000136 qLWRSB02.2 3 Length-width ratio of seed (LWRS) Composite interval mapping (CIM) WuH15 Recombinant inbred line (RILs) AhSNP13898835 NA 0 0 AhSNP13936477 0 0 52 - 55.2 2.75 4.64 10.3389/fpls.2018.00827 NA NA t3818.T000137 qLWRSB06 3 Length-width ratio of seed (LWRS) Composite interval mapping (CIM) WuH16 Recombinant inbred line (RILs) AhSNP14760776 NA 0 0 AhSNP14701698 0 0 148.4 - 151.7 7.27 15.41 10.3389/fpls.2018.00827 NA NA t3818.T000138 qSNPPB07 3 Seed number per pod (SNPP) Composite interval mapping (CIM) WuH16 Recombinant inbred line (RILs) AhSNP7931358 NA 0 0 AhSNP8321099 0 0 21.6 - 28.7 2.87 5.23 10.3389/fpls.2018.00827 NA NA t3818.T000139 qPHA09.1a 3 Plant height Composite interval mapping (CIM) YX2013 Recombinant inbred lnes (RILs) NA 0 0 0 0 20.7 - 21.2 11.27 19.67 10.3389/fpls.2018.00684 NA NA t3818.T000140 qPHA09.1b 3 Plant height Composite interval mapping (CIM) YX2013 Recombinant inbred lnes (RILs) NA 0 0 0 0 24.5 - 25 16.34 25.73 10.3389/fpls.2018.00684 NA NA t3818.T000141 qPHA09.1c 3 Plant height Composite interval mapping (CIM) YX2013 Recombinant inbred lnes (RILs) NA 0 0 0 0 26.6 - 27 16.72 26.27 10.3389/fpls.2018.00684 NA NA t3818.T000142 qPHA09.1d 3 Plant height Composite interval mapping (CIM) YX2013 Recombinant inbred lnes (RILs) NA 0 0 0 0 32.9 - 41.4 11.59 23.22 10.3389/fpls.2018.00684 NA NA t3818.T000143 qPHB03.1a 3 Plant height Composite interval mapping (CIM) YX2013 Recombinant inbred lnes (RILs) NA 0 0 0 0 41.9 - 52.2 6.89 9.13 10.3389/fpls.2018.00684 NA NA t3818.T000144 qPHB05.1a 3 Plant height Composite interval mapping (CIM) YX2013 Recombinant inbred lnes (RILs) NA 0 0 0 0 39.6 - 40.2 5.88 8.53 10.3389/fpls.2018.00684 NA NA t3818.T000145 qPHB05.1b 3 Plant height Composite interval mapping (CIM) YX2013 Recombinant inbred lnes (RILs) NA 0 0 0 0 46.8 - 47.8 9.12 12.49 10.3389/fpls.2018.00684 NA NA t3818.T000146 qPHB05.1c 3 Plant height Composite interval mapping (CIM) YX2013 Recombinant inbred lnes (RILs) NA 0 0 0 0 54.1 - 56.1 5.46 7.78 10.3389/fpls.2018.00684 NA NA t3818.T000147 qPHA01.2a 3 Plant height Composite interval mapping (CIM) YX2014 Recombinant inbred lnes (RILs) NA 0 0 0 0 0 - 1.7 4.51 4.9 10.3389/fpls.2018.00684 NA NA t3818.T000148 qPHA01.2b 3 Plant height Composite interval mapping (CIM) YX2014 Recombinant inbred lnes (RILs) NA 0 0 0 0 31.4 - 33.8 3.64 3.99 10.3389/fpls.2018.00684 NA NA t3818.T000149 qPHA05.2a 3 Plant height Composite interval mapping (CIM) YX2014 Recombinant inbred lnes (RILs) NA 0 0 0 0 82.9 - 86.4 4.42 4.84 10.3389/fpls.2018.00684 NA NA t3818.T000150 qPHA09.2a 3 Plant height Composite interval mapping (CIM) YX2014 Recombinant inbred lnes (RILs) NA 0 0 0 0 19.9 - 22.1 6.3 8.33 10.3389/fpls.2018.00684 NA NA t3818.T000151 qPHA09.2b 3 Plant height Composite interval mapping (CIM) YX2014 Recombinant inbred lnes (RILs) NA 0 0 0 0 26.6 - 27.4 7.09 9.32 10.3389/fpls.2018.00684 NA NA t3818.T000152 qPHA09.2c 3 Plant height Composite interval mapping (CIM) YX2014 Recombinant inbred lnes (RILs) NA 0 0 0 0 29 - 29.6 7.95 10.25 10.3389/fpls.2018.00684 NA NA t3818.T000153 qPHA09.2d 3 Plant height Composite interval mapping (CIM) YX2014 Recombinant inbred lnes (RILs) NA 0 0 0 0 31.3 - 34.9 4.52 8.17 10.3389/fpls.2018.00684 NA NA t3818.T000154 qPHB02.2a 3 Plant height Composite interval mapping (CIM) YX2014 Recombinant inbred lnes (RILs) NA 0 0 0 0 56.5 - 59 3.83 4.17 10.3389/fpls.2018.00684 NA NA t3818.T000155 qPHB03.2a 3 Plant height Composite interval mapping (CIM) YX2014 Recombinant inbred lnes (RILs) NA 0 0 0 0 33.8 - 44.3 7.79 9.96 10.3389/fpls.2018.00684 NA NA t3818.T000156 qPHB04.2a 3 Plant height Composite interval mapping (CIM) YX2014 Recombinant inbred lnes (RILs) NA 0 0 0 0 47.8 - 49.9 4.88 6.27 10.3389/fpls.2018.00684 NA NA t3818.T000157 qPHB04.2b 3 Plant height Composite interval mapping (CIM) YX2014 Recombinant inbred lnes (RILs) NA 0 0 0 0 51.3 - 52 5.42 6.79 10.3389/fpls.2018.00684 NA NA t3818.T000158 qPHB04.2c 3 Plant height Composite interval mapping (CIM) YX2014 Recombinant inbred lnes (RILs) NA 0 0 0 0 55 - 56 4.64 5.86 10.3389/fpls.2018.00684 NA NA t3818.T000159 qPHB05.2a 3 Plant height Composite interval mapping (CIM) YX2014 Recombinant inbred lnes (RILs) NA 0 0 0 0 69.3 - 71.4 5.27 6.92 10.3389/fpls.2018.00684 NA NA t3818.T000160 qPHB05.2b 3 Plant height Composite interval mapping (CIM) YX2014 Recombinant inbred lnes (RILs) NA 0 0 0 0 80 - 81.8 7.71 12.85 10.3389/fpls.2018.00684 NA NA t3818.T000161 qPHB08.2a 3 Plant height Composite interval mapping (CIM) YX2014 Recombinant inbred lnes (RILs) NA 0 0 0 0 13.4 - 19.5 4.19 4.68 10.3389/fpls.2018.00684 NA NA t3818.T000162 qPHB08.2b 3 Plant height Composite interval mapping (CIM) YX2014 Recombinant inbred lnes (RILs) NA 0 0 0 0 21.1 - 24.9 4.45 5.51 10.3389/fpls.2018.00684 NA NA t3818.T000163 qPHA05.3a 3 Plant height Composite interval mapping (CIM) YX2015 Recombinant inbred lnes (RILs) NA 0 0 0 0 84.1 - 86.9 4.5 6.88 10.3389/fpls.2018.00684 NA NA t3818.T000164 qPHA05.3b 3 Plant height Composite interval mapping (CIM) YX2015 Recombinant inbred lnes (RILs) NA 0 0 0 0 90.3 - 91.3 4.67 7.97 10.3389/fpls.2018.00684 NA NA t3818.T000165 qPHA09.3a 3 Plant height Composite interval mapping (CIM) YX2015 Recombinant inbred lnes (RILs) NA 0 0 0 0 23.4 - 25.2 3.08 4.64 10.3389/fpls.2018.00684 NA NA t3818.T000166 qPHB08.3a 3 Plant height Composite interval mapping (CIM) YX2015 Recombinant inbred lnes (RILs) NA 0 0 0 0 1.1 - 13.4 4.03 9.18 10.3389/fpls.2018.00684 NA NA t3818.T000167 qPHB08.3b 3 Plant height Composite interval mapping (CIM) YX2015 Recombinant inbred lnes (RILs) NA 0 0 0 0 19.5 - 22.8 5.85 8.96 10.3389/fpls.2018.00684 NA NA t3818.T000168 qPHA05.4a 3 Plant height Composite interval mapping (CIM) YX2015 Recombinant inbred lnes (RILs) NA 0 0 0 0 92.5 - 98.8 3.83 5.1 10.3389/fpls.2018.00684 NA NA t3818.T000169 qPHA09.4a 3 Plant height Composite interval mapping (CIM) YX2015 Recombinant inbred lnes (RILs) NA 0 0 0 0 20.6 - 21.4 13.15 22.28 10.3389/fpls.2018.00684 NA NA t3818.T000170 qPHA09.4b 3 Plant height Composite interval mapping (CIM) YX2015 Recombinant inbred lnes (RILs) NA 0 0 0 0 24.1 - 24.5 14.97 24.74 10.3389/fpls.2018.00684 NA NA t3818.T000171 qPHA09.4c 3 Plant height Composite interval mapping (CIM) YX2015 Recombinant inbred lnes (RILs) NA 0 0 0 0 27.4 - 28.1 4.26 6.23 10.3389/fpls.2018.00684 NA NA t3818.T000172 qPHB05.4a 3 Plant height Composite interval mapping (CIM) YX2015 Recombinant inbred lnes (RILs) NA 0 0 0 0 54.4 - 56.4 6.03 8.37 10.3389/fpls.2018.00684 NA NA t3818.T000173 qPHB05.4b 3 Plant height Composite interval mapping (CIM) YX2015 Recombinant inbred lnes (RILs) NA 0 0 0 0 59.3 - 60.7 7.57 10.31 10.3389/fpls.2018.00684 NA NA t3818.T000174 qPHB10.4a 3 Plant height Composite interval mapping (CIM) YX2015 Recombinant inbred lnes (RILs) NA 0 0 0 0 48.6 - 49.5 3.59 4.83 10.3389/fpls.2018.00684 NA NA t3818.T000175 qPHB10.4b 3 Plant height Composite interval mapping (CIM) YX2015 Recombinant inbred lnes (RILs) NA 0 0 0 0 55.5 - 56.2 4.5 5.96 10.3389/fpls.2018.00684 NA NA t3818.T000176 qPHB10.4c 3 Plant height Composite interval mapping (CIM) YX2015 Recombinant inbred lnes (RILs) NA 0 0 0 0 61.7 - 64.3 3.67 4.92 10.3389/fpls.2018.00684 NA NA t3818.T000177 qPHA09.1a 3 Plant height Composite interval mapping (CIM) XZ2014 Recombinant inbred lnes (RILs) NA 0 0 0 0 29.8 - 36.1 3.73 7.52 10.3389/fpls.2018.00684 NA NA t3818.T000178 qPHB10.1a 3 Plant height Composite interval mapping (CIM) XZ2014 Recombinant inbred lnes (RILs) NA 0 0 0 0 83.2 - 108.2 3.42 6.41 10.3389/fpls.2018.00684 NA NA t3818.T000179 qPHA05.2a 3 Plant height Composite interval mapping (CIM) XZ2015 Recombinant inbred lnes (RILs) NA 0 0 0 0 87.9 - 89.5 4.29 8.16 10.3389/fpls.2018.00684 NA NA t3818.T000180 qPHB04.2a 3 Plant height Composite interval mapping (CIM) XZ2015 Recombinant inbred lnes (RILs) NA 0 0 0 0 9.8 - 18.1 5.11 11.97 10.3389/fpls.2018.00684 NA NA t3818.T000181 qPHB04.2b 3 Plant height Composite interval mapping (CIM) XZ2015 Recombinant inbred lnes (RILs) NA 0 0 0 0 18.1 - 25.4 5.64 12.03 10.3389/fpls.2018.00684 NA NA t3818.T000182 qPHA09.3a 3 Plant height Composite interval mapping (CIM) XZ2016 Recombinant inbred lnes (RILs) NA 0 0 0 0 36.4 - 38.4 5.51 10.63 10.3389/fpls.2018.00684 NA NA t3818.T000183 qPHA09.3b 3 Plant height Composite interval mapping (CIM) XZ2016 Recombinant inbred lnes (RILs) NA 0 0 0 0 42.1 - 45.4 5.5 9.91 10.3389/fpls.2018.00684 NA NA t3818.T000184 qPHB03.3a 3 Plant height Composite interval mapping (CIM) XZ2016 Recombinant inbred lnes (RILs) NA 0 0 0 0 34.9 - 40.6 3.59 8.6 10.3389/fpls.2018.00684 NA NA t3818.T000185 qPHB03.3b 3 Plant height Composite interval mapping (CIM) XZ2016 Recombinant inbred lnes (RILs) NA 0 0 0 0 50.9 - 52.3 3.88 6.91 10.3389/fpls.2018.00684 NA NA t3818.T000186 qPHB08.3a 3 Plant height Composite interval mapping (CIM) XZ2016 Recombinant inbred lnes (RILs) NA 0 0 0 0 0 - 6 3.7 6.73 10.3389/fpls.2018.00684 NA NA t3818.T000187 cqPHA05 3 Plant height meta-analysis Consensus map Recombinant inbred lines (RILs) NA 0 0 0 0 84.55 - 86.53 10.3389/fpls.2018.00684 NA NA t3818.T000188 cqPHA09.a 3 Plant height meta-analysis Consensus map Recombinant inbred lines (RILs) NA 0 0 0 0 20.87 - 21.22 10.3389/fpls.2018.00684 NA NA t3818.T000189 cqPHA09.b 3 Plant height meta-analysis Consensus map Recombinant inbred lines (RILs) NA 0 0 0 0 24.44 - 24.75 10.3389/fpls.2018.00684 NA NA t3818.T000190 cqPHA09.c 3 Plant height meta-analysis Consensus map Recombinant inbred lines (RILs) NA 0 0 0 0 26.73 - 27.08 10.3389/fpls.2018.00684 NA NA t3818.T000191 cqPHA09.d 3 Plant height meta-analysis Consensus map Recombinant inbred lines (RILs) NA 0 0 0 0 32.25 - 35.56 10.3389/fpls.2018.00684 NA NA t3818.T000192 cqPHB03 3 Plant height meta-analysis Consensus map Recombinant inbred lines (RILs) NA 0 0 0 0 39.17 - 46.52 10.3389/fpls.2018.00684 NA NA t3818.T000193 cqPHB05 3 Plant height meta-analysis Consensus map Recombinant inbred lines (RILs) NA 0 0 0 0 54.8 - 56.21 10.3389/fpls.2018.00684 NA NA t3818.T000194 cqPHB08 3 Plant height meta-analysis Consensus map Recombinant inbred lines (RILs) NA 0 0 0 0 20.29 - 22.78 10.3389/fpls.2018.00684 NA NA t3818.T000195 5 Oleic acid (C18:1) Composite interval mapping (CIM) E1(2010-Jining) Recombinant inbred lines (RILs) Marker2575339- NA 0 0 Marker2379598 0 0 116.5 - 119.5 24.85 53.99 10.1038/s41598-018-23873-7 NA NA t3818.T000196 5 Oleic acid (C18:1) Composite interval mapping (CIM) E1(2010-Jining) Recombinant inbred lines (RILs) Marker4391589- NA 0 0 Marker4463600 0 0 61.5 - 62.5 5.16 7.91 10.1038/s41598-018-23873-7 NA NA t3818.T000197 5 Oleic acid (C18:1) Composite interval mapping (CIM) E1(2010-Jining) Recombinant inbred lines (RILs) Marker3051079- NA 0 0 Marker3146388 0 0 36.5 - 43.5 2.62 3.78 10.1038/s41598-018-23873-7 NA NA t3818.T000198 5 Oleic acid (C18:1) Composite interval mapping (CIM) E2(2010-Laixi) Recombinant inbred lines (RILs) Marker2575339- NA 0 0 Marker2379598 0 0 116.5 - 119.5 28.19 55.29 10.1038/s41598-018-23873-7 NA NA t3818.T000199 5 Oleic acid (C18:1) Composite interval mapping (CIM) E2(2010-Laixi) Recombinant inbred lines (RILs) Marker4391589- NA 0 0 Marker4463600 0 0 61.5 - 62.5 7.58 10.44 10.1038/s41598-018-23873-7 NA NA t3818.T000200 5 Oleic acid (C18:1) Composite interval mapping (CIM) E3(2011-Laixi) Recombinant inbred lines (RILs) Marker2575339- NA 0 0 Marker2379598 0 0 116.5 - 119.5 31.85 57.6 10.1038/s41598-018-23873-7 NA NA t3818.T000201 5 Oleic acid (C18:1) Composite interval mapping (CIM) E3(2011-Laixi) Recombinant inbred lines (RILs) Marker4391589- NA 0 0 Marker4463600 0 0 61.5 - 62.5 8.73 10.68 10.1038/s41598-018-23873-7 NA NA t3818.T000202 5 Oleic acid (C18:1) Composite interval mapping (CIM) E3(2011-Laixi) Recombinant inbred lines (RILs) Marker3051079- NA 0 0 Marker3146388 0 0 35.5 - 43.5 3.33 3.68 10.1038/s41598-018-23873-7 NA NA t3818.T000203 5 Oleic acid (C18:1) Composite interval mapping (CIM) E4(2011-Baoding) Recombinant inbred lines (RILs) Marker2575339- NA 0 0 Marker2379598 0 0 116.5 - 119.5 23.67 51.78 10.1038/s41598-018-23873-7 NA NA t3818.T000204 5 Oleic acid (C18:1) Composite interval mapping (CIM) E4(2011-Baoding) Recombinant inbred lines (RILs) Marker4391589- NA 0 0 Marker4463600 0 0 61.5 - 62.5 5.6 8.74 10.1038/s41598-018-23873-7 NA NA t3818.T000205 5 Oleic acid (C18:1) Composite interval mapping (CIM) E5(2012-Laixi) Recombinant inbred lines (RILs) Marker2575339- NA 0 0 Marker2379598 0 0 116.5 - 119.5 32.64 57.44 10.1038/s41598-018-23873-7 NA NA t3818.T000206 5 Oleic acid (C18:1) Composite interval mapping (CIM) E5(2012-Laixi) Recombinant inbred lines (RILs) Marker4391589- NA 0 0 Marker4463600 0 0 61.5 - 62.5 7.53 8.6 10.1038/s41598-018-23873-7 NA NA t3818.T000207 5 Oleic acid (C18:1) Composite interval mapping (CIM) E5(2012-Laixi) Recombinant inbred lines (RILs) IPAHM_103- NA 0 0 Marker4016934 0 0 118.5 - 128.5 3.42 3.98 10.1038/s41598-018-23873-7 NA NA t3818.T000208 5 Oleic acid (C18:1) Composite interval mapping (CIM) E5(2012-Laixi) Recombinant inbred lines (RILs) Marker5056376- NA 0 0 Marker5054465 0 0 0 - 2.5 2.93 3.05 10.1038/s41598-018-23873-7 NA NA t3818.T000209 5 Oleic acid (C18:1) Composite interval mapping (CIM) E6(2012-Dongying) Recombinant inbred lines (RILs) Marker2575339- NA 0 0 Marker2379598 0 0 116.5 - 119.5 18.28 46.15 10.1038/s41598-018-23873-7 NA NA t3818.T000210 5 Oleic acid (C18:1) Composite interval mapping (CIM) E6(2012-Dongying) Recombinant inbred lines (RILs) Marker4391589- NA 0 0 Marker4463600 0 0 60.5 - 63.5 6.92 13.12 10.1038/s41598-018-23873-7 NA NA t3818.T000211 5 Oleic acid (C18:1) Composite interval mapping (CIM) E7(2014-Laixi) Recombinant inbred lines (RILs) Marker2575339- NA 0 0 Marker2379598 0 0 116.5 - 118.5 30.44 55.66 10.1038/s41598-018-23873-7 NA NA t3818.T000212 5 Oleic acid (C18:1) Composite interval mapping (CIM) E7(2014-Laixi) Recombinant inbred lines (RILs) Marker4391589- NA 0 0 Marker4463600 0 0 60.5 - 62.5 8.41 10.46 10.1038/s41598-018-23873-7 NA NA t3818.T000213 5 Oleic acid (C18:1) Composite interval mapping (CIM) E7(2014-Laixi) Recombinant inbred lines (RILs) IPAHM_103- NA 0 0 Marker4016934 0 0 118.5 - 128.5 3.63 4.63 10.1038/s41598-018-23873-7 NA NA t3818.T000214 5 Linoelic acid (C18:2) Composite interval mapping (CIM) E1(2010-Jining) Recombinant inbred lines (RILs) Marker2575339- NA 0 0 Marker2379598 0 0 116.5 - 119.5 24.68 53.93 10.1038/s41598-018-23873-7 NA NA t3818.T000215 5 Linoelic acid (C18:2) Composite interval mapping (CIM) E1(2010-Jining) Recombinant inbred lines (RILs) Marker4391589- NA 0 0 Marker4463600 0 0 61.5 - 62.5 4.79 7.36 10.1038/s41598-018-23873-7 NA NA t3818.T000216 5 Linoelic acid (C18:2) Composite interval mapping (CIM) E1(2010-Jining) Recombinant inbred lines (RILs) Marker3051079- NA 0 0 Marker3146388 0 0 36.5 - 43.5 2.71 3.94 10.1038/s41598-018-23873-7 NA NA t3818.T000217 5 Linoelic acid (C18:2) Composite interval mapping (CIM) E2(2010-Laixi) Recombinant inbred lines (RILs) Marker2575339- NA 0 0 Marker2379598 0 0 116.5 - 119.5 27.4 54.87 10.1038/s41598-018-23873-7 NA NA t3818.T000218 5 Linoelic acid (C18:2) Composite interval mapping (CIM) E2(2010-Laixi) Recombinant inbred lines (RILs) Marker4391589- NA 0 0 Marker4463600 0 0 61.5 - 62.5 6.84 9.61 10.1038/s41598-018-23873-7 NA NA t3818.T000219 5 Linoelic acid (C18:2) Composite interval mapping (CIM) E3(2011-Laixi) Recombinant inbred lines (RILs) Marker2575339- NA 0 0 Marker2379598 0 0 116.5 - 119.5 31.47 57.56 10.1038/s41598-018-23873-7 NA NA t3818.T000220 5 Linoelic acid (C18:2) Composite interval mapping (CIM) E3(2011-Laixi) Recombinant inbred lines (RILs) Marker4391589- NA 0 0 Marker4463600 0 0 61.5 - 62.5 8.08 10 10.1038/s41598-018-23873-7 NA NA t3818.T000221 5 Linoelic acid (C18:2) Composite interval mapping (CIM) E3(2011-Laixi) Recombinant inbred lines (RILs) Marker3051079- NA 0 0 Marker3146388 0 0 35.5 - 43.5 3.23 3.64 10.1038/s41598-018-23873-7 NA NA t3818.T000222 5 Linoelic acid (C18:2) Composite interval mapping (CIM) E4(2011-Baoding) Recombinant inbred lines (RILs) Marker2575339- NA 0 0 Marker2379598 0 0 116.5 - 119.5 23.46 51.87 10.1038/s41598-018-23873-7 NA NA t3818.T000223 5 Linoelic acid (C18:2) Composite interval mapping (CIM) E4(2011-Baoding) Recombinant inbred lines (RILs) Marker4391589- NA 0 0 Marker4463600 0 0 61.5 - 62.5 5.05 7.92 10.1038/s41598-018-23873-7 NA NA t3818.T000224 5 Linoelic acid (C18:2) Composite interval mapping (CIM) E5(2012-Laixi) Recombinant inbred lines (RILs) Marker2575339- NA 0 0 Marker2379598 0 0 116.5 - 119.5 29.61 56.78 10.1038/s41598-018-23873-7 NA NA t3818.T000225 5 Linoelic acid (C18:2) Composite interval mapping (CIM) E5(2012-Laixi) Recombinant inbred lines (RILs) Marker4391589- NA 0 0 Marker4463600 0 0 61.5 - 62.5 7.2 9.35 10.1038/s41598-018-23873-7 NA NA t3818.T000226 5 Linoelic acid (C18:2) Composite interval mapping (CIM) E5(2012-Laixi) Recombinant inbred lines (RILs) IPAHM_103- NA 0 0 Marker4016934 0 0 118.5 - 130 2.92 3.85 10.1038/s41598-018-23873-7 NA NA t3818.T000227 5 Linoelic acid (C18:2) Composite interval mapping (CIM) E6(2012-Dongying) Recombinant inbred lines (RILs) Marker2575339- NA 0 0 Marker2379598 0 0 116.5 - 119.5 18.38 46.33 10.1038/s41598-018-23873-7 NA NA t3818.T000228 5 Linoelic acid (C18:2) Composite interval mapping (CIM) E6(2012-Dongying) Recombinant inbred lines (RILs) Marker4391589- NA 0 0 Marker4463600 0 0 60.5 - 63.5 6.67 12.95 10.1038/s41598-018-23873-7 NA NA t3818.T000229 5 Linoelic acid (C18:2) Composite interval mapping (CIM) E7(2014-Laixi) Recombinant inbred lines (RILs) Marker2575339- NA 0 0 Marker2379598 0 0 116.5 - 118.5 29.89 55.65 10.1038/s41598-018-23873-7 NA NA t3818.T000230 5 Linoelic acid (C18:2) Composite interval mapping (CIM) E7(2014-Laixi) Recombinant inbred lines (RILs) Marker4391589- NA 0 0 Marker4463600 0 0 60.5 - 62.5 7.13 8.96 10.1038/s41598-018-23873-7 NA NA t3818.T000231 5 Linoelic acid (C18:2) Composite interval mapping (CIM) E7(2014-Laixi) Recombinant inbred lines (RILs) IPAHM_103- NA 0 0 Marker4016934 0 0 116.5 - 128.5 3.94 5.16 10.1038/s41598-018-23873-7 NA NA t3818.T000232 5 The ratio of oleic acid to linoleic acid (O/L) Composite interval mapping (CIM) E1(2010-Jining) Recombinant inbred lines (RILs) Marker2575339- NA 0 0 Marker2379598 0 0 116.5 - 120.5 13.84 36.5 10.1038/s41598-018-23873-7 NA NA t3818.T000233 5 The ratio of oleic acid to linoleic acid (O/L) Composite interval mapping (CIM) E2(2010-Laixi) Recombinant inbred lines (RILs) Marker4391589- NA 0 0 Marker4463600 0 0 60.5 - 62.5 3.38 6.71 10.1038/s41598-018-23873-7 NA NA t3818.T000234 5 The ratio of oleic acid to linoleic acid (O/L) Composite interval mapping (CIM) E2(2010-Laixi) Recombinant inbred lines (RILs) Marker2575339- NA 0 0 Marker2379598 0 0 116.5 - 119.5 15.64 39.65 10.1038/s41598-018-23873-7 NA NA t3818.T000235 5 The ratio of oleic acid to linoleic acid (O/L) Composite interval mapping (CIM) E3(2011-Laixi) Recombinant inbred lines (RILs) Marker4391589- NA 0 0 Marker4463600 0 0 60.5 - 62.5 3.84 7.34 10.1038/s41598-018-23873-7 NA NA t3818.T000236 5 The ratio of oleic acid to linoleic acid (O/L) Composite interval mapping (CIM) E3(2011-Laixi) Recombinant inbred lines (RILs) Marker2575339- NA 0 0 Marker2379598 0 0 116.5 - 120.5 16.8 41.07 10.1038/s41598-018-23873-7 NA NA t3818.T000237 5 The ratio of oleic acid to linoleic acid (O/L) Composite interval mapping (CIM) E4(2011-Baoding) Recombinant inbred lines (RILs) Marker4391589- NA 0 0 Marker4463600 0 0 60.5 - 63.5 2.88 5.86 10.1038/s41598-018-23873-7 NA NA t3818.T000238 5 The ratio of oleic acid to linoleic acid (O/L) Composite interval mapping (CIM) E4(2011-Baoding) Recombinant inbred lines (RILs) Marker2575339- NA 0 0 Marker2379598 0 0 116.5 - 120.5 15.2 39.51 10.1038/s41598-018-23873-7 NA NA t3818.T000239 5 The ratio of oleic acid to linoleic acid (O/L) Composite interval mapping (CIM) E5(2012-Laixi) Recombinant inbred lines (RILs) Marker4982682- NA 0 0 Marker4932636 0 0 113.5 - 114.5 2.57 5.28 10.1038/s41598-018-23873-7 NA NA t3818.T000240 5 The ratio of oleic acid to linoleic acid (O/L) Composite interval mapping (CIM) E5(2012-Laixi) Recombinant inbred lines (RILs) Marker4391589- NA 0 0 Marker4463600 0 0 60.5 - 62.5 2.87 6 10.1038/s41598-018-23873-7 NA NA t3818.T000241 5 The ratio of oleic acid to linoleic acid (O/L) Composite interval mapping (CIM) E5(2012-Laixi) Recombinant inbred lines (RILs) Marker2575339- NA 0 0 Marker2379598 0 0 116.5 - 119.5 14.82 38.33 10.1038/s41598-018-23873-7 NA NA t3818.T000242 5 The ratio of oleic acid to linoleic acid (O/L) Composite interval mapping (CIM) E6(2012-Dongying) Recombinant inbred lines (RILs) Marker4742410- NA 0 0 Marker4872231 0 0 82.5 - 83.5 4.23 10.1 10.1038/s41598-018-23873-7 NA NA t3818.T000243 5 The ratio of oleic acid to linoleic acid (O/L) Composite interval mapping (CIM) E6(2012-Dongying) Recombinant inbred lines (RILs) Marker4391589- NA 0 0 Marker4463600 0 0 60.5 - 63.5 4.59 11.13 10.1038/s41598-018-23873-7 NA NA t3818.T000244 5 The ratio of oleic acid to linoleic acid (O/L) Composite interval mapping (CIM) E6(2012-Dongying) Recombinant inbred lines (RILs) Marker2575339- NA 0 0 Marker2379598 0 0 116.5 - 119.5 8.88 23.87 10.1038/s41598-018-23873-7 NA NA t3818.T000245 5 The ratio of oleic acid to linoleic acid (O/L) Composite interval mapping (CIM) E7(2014-Laixi) Recombinant inbred lines (RILs) Marker4391589- NA 0 0 Marker4463600 0 0 60.5 - 63.5 3.59 6.28 10.1038/s41598-018-23873-7 NA NA t3818.T000246 5 The ratio of oleic acid to linoleic acid (O/L) Composite interval mapping (CIM) E7(2014-Laixi) Recombinant inbred lines (RILs) Marker2575339- NA 0 0 Marker2379598 0 0 116.5 - 119.5 18.68 43.41 10.1038/s41598-018-23873-7 NA NA t3818.T000247 5 Oil content (OC) Q + K model E1 Accessions AHGS2393 NA 0 0 0 0 10.475 8.35 12.27 10.1111/jipb.12601 NA NA t3818.T000248 5 Oil content (OC) Q + K model E2 Accessions AHGS2393 NA 0 0 0 0 10.475 23.49 36.34 10.1111/jipb.12601 NA NA t3818.T000249 5 Oil content (OC) Q + K model E3 Accessions AHGS2393 NA 0 0 0 0 10.475 36.48 49.28 10.1111/jipb.12601 NA NA t3818.T000250 5 Oil content (OC) Q + K model E1 Accessions AhTE0824 NA 0 0 0 0 48.818 7.05 14.16 10.1111/jipb.12601 NA NA t3818.T000251 5 Oil content (OC) Q + K model E2 Accessions AhTE0824 NA 0 0 0 0 48.818 18.76 33.42 10.1111/jipb.12601 NA NA t3818.T000252 5 Oil content (OC) Q + K model E3 Accessions AhTE0824 NA 0 0 0 0 48.818 35.68 50.8 10.1111/jipb.12601 NA NA t3818.T000253 5 Oil content (OC) Q + K model E1 Accessions AHGS1203 NA 0 0 0 0 48.508 5.07 12.02 10.1111/jipb.12601 NA NA t3818.T000254 5 Oil content (OC) Q + K model E2 Accessions AHGS1203 NA 0 0 0 0 48.508 19.63 33.26 10.1111/jipb.12601 NA NA t3818.T000255 5 Oil content (OC) Q + K model E3 Accessions AHGS1203 NA 0 0 0 0 48.508 35.24 49.7 10.1111/jipb.12601 NA NA t3818.T000256 5 Protein content (PC) Q + K model E1 Accessions PM427 NA 0 0 0 0 40.335 4.51 7.39 10.1111/jipb.12601 NA NA t3818.T000257 5 Protein content (PC) Q + K model E2 Accessions PM427 NA 0 0 0 0 40.335 8.39 9.83 10.1111/jipb.12601 NA NA t3818.T000258 5 Protein content (PC) Q + K model E3 Accessions PM427 NA 0 0 0 0 40.335 15.65 12.03 10.1111/jipb.12601 NA NA t3818.T000259 5 Protein content (PC) Q + K model E1 Accessions AHGS1525 NA 0 0 0 0 17.772 3.57 6.74 10.1111/jipb.12601 NA NA t3818.T000260 5 Protein content (PC) Q + K model E2 Accessions AHGS1525 NA 0 0 0 0 17.772 6.56 10.17 10.1111/jipb.12601 NA NA t3818.T000261 5 Protein content (PC) Q + K model E3 Accessions AHGS1525 NA 0 0 0 0 17.772 4.12 8.56 10.1111/jipb.12601 NA NA t3818.T000262 5 Protein content (PC) Q + K model E1 Accessions AhTE0788 NA 0 0 0 0 36.17 3.96 8.7 10.1111/jipb.12601 NA NA t3818.T000263 5 Protein content (PC) Q + K model E2 Accessions AhTE0788 NA 0 0 0 0 36.17 5.24 12.31 10.1111/jipb.12601 NA NA t3818.T000264 5 Protein content (PC) Q + K model E3 Accessions AhTE0788 NA 0 0 0 0 36.17 6.15 9.22 10.1111/jipb.12601 NA NA t3818.T000265 5 Oleic acid content (OAC) Q + K model E1 Accessions AhTE0391 NA 0 0 0 0 70.343 5.97 16.21 10.1111/jipb.12601 NA NA t3818.T000266 5 Oleic acid content (OAC) Q + K model E2 Accessions AhTE0391 NA 0 0 0 0 70.343 8.31 12.3 10.1111/jipb.12601 NA NA t3818.T000267 5 Oleic acid content (OAC) Q + K model E3 Accessions AhTE0391 NA 0 0 0 0 70.343 6.59 9.75 10.1111/jipb.12601 NA NA t3818.T000268 5 Oleic acid content (OAC) Q + K model E1 Accessions AHGS1386 NA 0 0 0 0 95.014 3.94 8.59 10.1111/jipb.12601 NA NA t3818.T000269 5 Oleic acid content (OAC) Q + K model E2 Accessions AHGS1386 NA 0 0 0 0 95.014 5.07 11.31 10.1111/jipb.12601 NA NA t3818.T000270 5 Oleic acid content (OAC) Q + K model E3 Accessions AHGS1386 NA 0 0 0 0 95.014 7.31 10.07 10.1111/jipb.12601 NA NA t3818.T000271 5 Oleic acid content (OAC) Q + K model E1 Accessions AhTE0586 NA 0 0 0 0 107.97 4.61 8.75 10.1111/jipb.12601 NA NA t3818.T000272 5 Oleic acid content (OAC) Q + K model E2 Accessions AhTE0586 NA 0 0 0 0 107.97 5.29 6.37 10.1111/jipb.12601 NA NA t3818.T000273 5 Oleic acid content (OAC) Q + K model E3 Accessions AhTE0586 NA 0 0 0 0 107.97 9.2 11.57 10.1111/jipb.12601 NA NA t3818.T000274 5 Oleic acid content (OAC) Q + K model E1 Accessions AHGS2111 NA 0 0 0 0 67.014 3.99 5.42 10.1111/jipb.12601 NA NA t3818.T000275 5 Oleic acid content (OAC) Q + K model E2 Accessions AHGS2111 NA 0 0 0 0 67.014 5.75 5.86 10.1111/jipb.12601 NA NA t3818.T000276 5 Oleic acid content (OAC) Q + K model E3 Accessions AHGS2111 NA 0 0 0 0 67.014 6.61 7.1 10.1111/jipb.12601 NA NA t3818.T000277 5 Linoleic acid content (LAC) Q + K model E1 Accessions AhTE0391 NA 0 0 0 0 70.343 6.13 15.31 10.1111/jipb.12601 NA NA t3818.T000278 5 Linoleic acid content (LAC) Q + K model E2 Accessions AhTE0391 NA 0 0 0 0 70.343 7.95 10.8 10.1111/jipb.12601 NA NA t3818.T000279 5 Linoleic acid content (LAC) Q + K model E3 Accessions AhTE0391 NA 0 0 0 0 70.343 7.07 11.95 10.1111/jipb.12601 NA NA t3818.T000280 5 Linoleic acid content (LAC) Q + K model E1 Accessions AhTE0586 NA 0 0 0 0 107.97 5.21 7.35 10.1111/jipb.12601 NA NA t3818.T000281 5 Linoleic acid content (LAC) Q + K model E2 Accessions AhTE0586 NA 0 0 0 0 107.97 6.37 9.2 10.1111/jipb.12601 NA NA t3818.T000282 5 Linoleic acid content (LAC) Q + K model E3 Accessions AhTE0586 NA 0 0 0 0 107.97 6.98 9.91 10.1111/jipb.12601 NA NA t3818.T000283 5 Linoleic acid content (LAC) Q + K model E1 Accessions AHGS2111 NA 0 0 0 0 67.014 5.22 5.27 10.1111/jipb.12601 NA NA t3818.T000284 5 Linoleic acid content (LAC) Q + K model E2 Accessions AHGS2111 NA 0 0 0 0 67.014 4.97 7.11 10.1111/jipb.12601 NA NA t3818.T000285 5 Linoleic acid content (LAC) Q + K model E3 Accessions AHGS2111 NA 0 0 0 0 67.014 7.34 7.75 10.1111/jipb.12601 NA NA t3818.T000286 1 Early leaf spot (ELS) Single marker analysis F2 mapping population F2:3 lines Seq19G07 NA 0 0 0 0 0.025 3.18 10.1016/j.btre.2017.07.005 NA NA t3818.T000287 1 Early leaf spot (ELS) Single marker analysis F2 mapping population F2:3 lines GM2480 NA 0 0 0 0 0.012 5.86 10.1016/j.btre.2017.07.005 NA NA t3818.T000288 1 Early leaf spot (ELS) Single marker analysis F2 mapping population F2:3 lines TC6E01 NA 0 0 0 0 0.0001 18.12 10.1016/j.btre.2017.07.005 NA NA t3818.T000289 1 Early leaf spot (ELS) Single marker analysis F2 mapping population F2:3 lines IPAHM509 NA 0 0 0 0 0.008 11.67 10.1016/j.btre.2017.07.005 NA NA t3818.T000290 1 Early leaf spot (ELS) Single marker analysis F2 mapping population F2:3 lines AH4-101 NA 0 0 0 0 0.016 3.86 10.1016/j.btre.2017.07.005 NA NA t3818.T000291 1 Early leaf spot (ELS) Single marker analysis F2 mapping population F2:3 lines GM1878 NA 0 0 0 0 0.001 23.25 10.1016/j.btre.2017.07.005 NA NA t3818.T000292 1 Early leaf spot (ELS) Single marker analysis F2 mapping population F2:3 lines GM1911 NA 0 0 0 0 0.047 5.31 10.1016/j.btre.2017.07.005 NA NA t3818.T000293 1 Early leaf spot (ELS) Single marker analysis F2 mapping population F2:3 lines Seq3E10 NA 0 0 0 0 0.014 7.04 10.1016/j.btre.2017.07.005 NA NA t3818.T000294 1 Early leaf spot (ELS) Single marker analysis F2 mapping population F2:3 lines GA131 NA 0 0 0 0 0.001 5.76 10.1016/j.btre.2017.07.005 NA NA t3818.T000295 1 Early leaf spot (ELS) Single marker analysis F2 mapping population F2:3 lines Seq13E09 NA 0 0 0 0 0.014 10.68 10.1016/j.btre.2017.07.005 NA NA t3818.T000296 1 Early leaf spot (ELS) Single marker analysis F2 mapping population F2:3 lines GM1883 NA 0 0 0 0 0.003 13.24 10.1016/j.btre.2017.07.005 NA NA t3818.T000297 1 Early leaf spot (ELS) Single marker analysis F2 mapping population F2:3 lines GM2745 NA 0 0 0 0 0.004 16.77 10.1016/j.btre.2017.07.005 NA NA t3818.T000298 1 Early leaf spot (ELS) Single marker analysis F2 mapping population F2:3 lines GM1000 NA 0 0 0 0 0.042 3.46 10.1016/j.btre.2017.07.005 NA NA t3818.T000299 qOc-A02 5 Oil content Inclusive Composite Interval Map Oil content population F2 population Ah5507 NA 0 0 Ah5719 0 0 145 - 149 4.8 10.4 10.3389/fpls.2017.00794 NA NA t3818.T000300 qOc-B09-1 5 Oil content Inclusive Composite Interval Map Oil content population F2 population Ah6243 NA 0 0 Ah5482 0 0 44 - 49 3.8 8.4 10.3389/fpls.2017.00794 NA NA t3818.T000301 qOc-B09-2 5 Oil content Inclusive Composite Interval Map Oil content population F2 population Ah3119 NA 0 0 Ah3720 0 0 123 - 125 3 7.8 10.3389/fpls.2017.00794 NA NA t3818.T000302 qOc-A08 5 Oil content Inclusive Composite Interval Map Oil content population F2 population Ah5698 NA 0 0 Ah4509 0 0 42 - 43 3.4 7 10.3389/fpls.2017.00794 NA NA t3818.T000303 qOc-A10 5 Oil content Inclusive Composite Interval Map Oil content population F2 population Ah3864 NA 0 0 Ah2573 0 0 11 - 20 13.2 22.1 10.3389/fpls.2017.00794 NA NA t3818.T000304 qOc-B03 5 Oil content Inclusive Composite Interval Map Oil content population F2 population Ah2442 NA 0 0 Ah2505 0 0 69 - 72 4.4 5.6 10.3389/fpls.2017.00794 NA NA t3818.T000305 qOc-B06-1 5 Oil content Inclusive Composite Interval Map Oil content population F2 population Ah5187 NA 0 0 Ah6281 0 0 33 - 37 4.6 6.2 10.3389/fpls.2017.00794 NA NA t3818.T000306 qOc-B06-2 5 Oil content Inclusive Composite Interval Map Oil content population F2 population Ahs3239 NA 0 0 Ah6312 0 0 43 - 48 4.4 7.1 10.3389/fpls.2017.00794 NA NA t3818.T000307 qOle-A09-1 5 Oleic acid Inclusive Composite Interval Map Fatty acid population F2 population Ah3819 NA 0 0 FAD2A 0 0 13 - 24 20.3 17.4 10.3389/fpls.2017.00794 NA NA t3818.T000308 qOle-A09-2 5 Oleic acid Inclusive Composite Interval Map Fatty acid population F2 population Ah5452 NA 0 0 Ah6158 0 0 76 - 77 25.2 34.2 10.3389/fpls.2017.00794 NA NA t3818.T000309 qOle-B09 5 Oleic acid Inclusive Composite Interval Map Fatty acid population F2 population FAD2B NA 0 0 Ah3931 0 0 82 - 87 36.1 33.8 10.3389/fpls.2017.00794 NA NA t3818.T000310 qLin-A09-1 5 Lenoleic acid Inclusive Composite Interval Map Fatty acid population F2 population Ah3819 NA 0 0 FAD2A 0 0 13 - 24 6.2 19.5 10.3389/fpls.2017.00794 NA NA t3818.T000311 qLin-A09-2 5 Lenoleic acid Inclusive Composite Interval Map Fatty acid population F2 population Ah5853 NA 0 0 Ahs6334II 0 0 99 - 107 4 12.1 10.3389/fpls.2017.00794 NA NA t3818.T000312 qLin-B09 5 Lenoleic acid Inclusive Composite Interval Map Fatty acid population F2 population FAD2B NA 0 0 Ah3931 0 0 82 - 87 22.4 41 10.3389/fpls.2017.00794 NA NA t3818.T000313 qPal-A09 5 Plamitic acid Inclusive Composite Interval Map Fatty acid population F2 population Ah3819 NA 0 0 FAD2A 0 0 13 - 24 3.7 10.7 10.3389/fpls.2017.00794 NA NA t3818.T000314 qPal-B09 5 Plamitic acid Inclusive Composite Interval Map Fatty acid population F2 population FAD2B NA 0 0 Ah3931 0 0 82 - 87 16.6 18.4 10.3389/fpls.2017.00794 NA NA t3818.T000315 qPal-A08 5 Plamitic acid Inclusive Composite Interval Map Fatty acid population F2 population Ah4653 NA 0 0 Ah4264 0 0 23 - 25 17.9 20.1 10.3389/fpls.2017.00794 NA NA t3818.T000316 qPal-A10 5 Plamitic acid Inclusive Composite Interval Map Fatty acid population F2 population Ah4042 NA 0 0 Ah4430 0 0 61 - 71 5.2 10 10.3389/fpls.2017.00794 NA NA t3818.T000317 qPal-B04 5 Plamitic acid Inclusive Composite Interval Map Fatty acid population F2 population Ahs2963 NA 0 0 Ahs3184I 0 0 105 - 153 3.9 10 10.3389/fpls.2017.00794 NA NA t3818.T000318 qLig-A09 5 Lignoceric acid Inclusive Composite Interval Map Fatty acid population F2 population Ah5241 NA 0 0 Ah3376 0 0 95 - 97 10.4 12.1 10.3389/fpls.2017.00794 NA NA t3818.T000319 qLig-A05-1 5 Lignoceric acid Inclusive Composite Interval Map Fatty acid population F2 population Ah4275 NA 0 0 Ah6374 0 0 22 - 23 14 13.4 10.3389/fpls.2017.00794 NA NA t3818.T000320 qLig-A05-2 5 Lignoceric acid Inclusive Composite Interval Map Fatty acid population F2 population Ahs3122II NA 0 0 Ahs4487II 0 0 76 - 77 12.3 11.8 10.3389/fpls.2017.00794 NA NA t3818.T000321 qLig-A08 5 Lignoceric acid Inclusive Composite Interval Map Fatty acid population F2 population Ah5275 NA 0 0 Ah3064 0 0 70 - 75 3.07 10.5 10.3389/fpls.2017.00794 NA NA t3818.T000322 qLig-B01 5 Lignoceric acid Inclusive Composite Interval Map Fatty acid population F2 population Ah4564 NA 0 0 Ah6355 0 0 30 - 31 3.07 10.3 10.3389/fpls.2017.00794 NA NA t3818.T000323 qBeh-A05 5 Behenic acid Inclusive Composite Interval Map Fatty acid population F2 population Ahs4487II NA 0 0 Ahs3271I 0 0 77 - 78 17.8 12 10.3389/fpls.2017.00794 NA NA t3818.T000324 qBeh-A09 5 Behenic acid Inclusive Composite Interval Map Fatty acid population F2 population Ah5497 NA 0 0 Ah2642 0 0 92 - 94 8.6 8.4 10.3389/fpls.2017.00794 NA NA t3818.T000325 qAra-A05 5 Arachidic acid Inclusive Composite Interval Map Fatty acid population F2 population Ahs3122II NA 0 0 Ahs4487II 0 0 76 - 77 17.7 23.4 10.3389/fpls.2017.00794 NA NA t3818.T000326 qAra-A07 5 Arachidic acid Inclusive Composite Interval Map Fatty acid population F2 population Ah4597 NA 0 0 Ah6254 0 0 84 - 85 4.8 12.4 10.3389/fpls.2017.00794 NA NA t3818.T000327 qSte-A09 5 Stearic acid Inclusive Composite Interval Map Fatty acid population F2 population Ah5452 NA 0 0 Ah6158 0 0 76 - 77 191 78.6 10.3389/fpls.2017.00794 NA NA t3818.T000328 qPLA05.7 4 Pod Length (PL) Composite interval mapping (CIM) Wuhan 2013 Recombinant Inbred lines (RILs) population in F5 A05A1430 NA 0 0 A05A1601 0 0 11.1 16.89 10.1186/s12864-016-3456-x NA NA t3818.T000329 qPLA05.7 4 Pod Length (PL) Composite interval mapping (CIM) Wuhan 2014 Recombinant Inbred lines (RILs) population in F5 A05A1430 NA 0 0 A05A1601 0 0 22.7 27.84 10.1186/s12864-016-3456-x NA NA t3818.T000330 qPLA05.7 4 Pod Length (PL) Composite interval mapping (CIM) Wuhan 2015 Recombinant Inbred lines (RILs) population in F5 A05A1430 NA 0 0 A05A1601 0 0 19.4 23.91 10.1186/s12864-016-3456-x NA NA t3818.T000331 qPLA05.7 4 Pod Length (PL) Composite interval mapping (CIM) Xiangyang 2015 Recombinant Inbred lines (RILs) population in F5 A05A1430 NA 0 0 A05A1601 0 0 18.6 25.68 10.1186/s12864-016-3456-x NA NA t3818.T000332 qPWA05.5 4 Pod Width (PW) Composite interval mapping (CIM) Wuhan 2014 Recombinant Inbred lines (RILs) population in F5 A05A1344 NA 0 0 A05A1562 0 0 9.9 14.03 10.1186/s12864-016-3456-x NA NA t3818.T000333 qPWA05.5 4 Pod Width (PW) Composite interval mapping (CIM) Wuhan 2015 Recombinant Inbred lines (RILs) population in F5 A05A1344 NA 0 0 A05A1562 0 0 9 13.73 10.1186/s12864-016-3456-x NA NA t3818.T000334 qPWA05.5 4 Pod Width (PW) Composite interval mapping (CIM) Xiangyang 2015 Recombinant Inbred lines (RILs) population in F5 A05A1344 NA 0 0 A05A1562 0 0 8 14.12 10.1186/s12864-016-3456-x NA NA t3818.T000335 qHPWA05.6 4 Hundred-pod weight (HPW) Composite interval mapping (CIM) Wuhan 2013 Recombinant Inbred lines (RILs) population in F5 A05A1430 NA 0 0 A05A1601 0 0 13 21.74 10.1186/s12864-016-3456-x NA NA t3818.T000336 qHPWA05.6 4 Hundred-pod weight (HPW) Composite interval mapping (CIM) Wuhan 2014 Recombinant Inbred lines (RILs) population in F5 A05A1430 NA 0 0 A05A1601 0 0 14.6 21.29 10.1186/s12864-016-3456-x NA NA t3818.T000337 qHPWA05.6 4 Hundred-pod weight (HPW) Composite interval mapping (CIM) Wuhan 2015 Recombinant Inbred lines (RILs) population in F5 A05A1430 NA 0 0 A05A1601 0 0 16.3 26.82 10.1186/s12864-016-3456-x NA NA t3818.T000338 qHPWA05.6 4 Hundred-pod weight (HPW) Composite interval mapping (CIM) Xiangyang 2015 Recombinant Inbred lines (RILs) population in F5 A05A1430 NA 0 0 A05A1601 0 0 7.5 13.75 10.1186/s12864-016-3456-x NA NA t3818.T000339 qRust80D_06 1 Rust resistance QTL-seq Recombinant inbred lines (RILs) IPAHM103 NA 0 0 0 0 31.6 36.1 83.6 10.1111/pbi.12686 NA NA t3818.T000340 qRust90D_06 1 Rust resistance QTL-seq Recombinant inbred lines (RILs) IPAHM103 NA 0 0 0 0 30.6 24.1 75.4 10.1111/pbi.12686 NA NA t3818.T000341 qRust80D_07 1 Rust resistance QTL-seq Recombinant inbred lines (RILs) IPAHM103 NA 0 0 0 0 31.6 49.9 65.4 10.1111/pbi.12686 NA NA t3818.T000342 qRust90D_07 1 Rust resistance QTL-seq Recombinant inbred lines (RILs) IPAHM103 NA 0 0 0 0 31.6 47.2 73.1 10.1111/pbi.12686 NA NA t3818.T000343 qRust80D_08 1 Rust resistance QTL-seq Recombinant inbred lines (RILs) IPAHM103 NA 0 0 0 0 31.6 35.2 69.7 10.1111/pbi.12686 NA NA t3818.T000344 qRust90D_08 1 Rust resistance QTL-seq Recombinant inbred lines (RILs) IPAHM103 NA 0 0 0 0 31.6 49.2 63.7 10.1111/pbi.12686 NA NA t3818.T000345 qRust80D_09 1 Rust resistance QTL-seq Recombinant inbred lines (RILs) IPAHM103 NA 0 0 0 0 31.6 16 48.9 10.1111/pbi.12686 NA NA t3818.T000346 qRust90D_09 1 Rust resistance QTL-seq Recombinant inbred lines (RILs) IPAHM103 NA 0 0 0 0 31.6 14.6 42.7 10.1111/pbi.12686 NA NA t3818.T000347 qLLS70D_08 1 Late Leaf Spot (LLS) resistance QTL-seq Recombinant inbred lines (RILs) IPAHM103 NA 0 0 0 0 31.6 4.6 14.9 10.1111/pbi.12686 NA NA t3818.T000348 qLLS90D_08 1 Late Leaf Spot (LLS) resistance QTL-seq Recombinant inbred lines (RILs) IPAHM103 NA 0 0 0 0 30.6 21.1 63.1 10.1111/pbi.12686 NA NA t3818.T000349 qLLS90D_09 1 Late Leaf Spot (LLS) resistance QTL-seq Recombinant inbred lines (RILs) GM2009 NA 0 0 0 0 26.2 3.5 9 10.1111/pbi.12686 NA NA t3818.T000350 qBW-1 1 Bacterial wilt (BW) resistance Composite interval mapping (CIM) F2 population F2 population SNP79 NA 0 0 AHGS1853 0 0 3.911 0.216 26869849 NA NA t3818.T000351 qBW-1 1 Bacterial wilt (BW) resistance Composite interval mapping (CIM) F8 population F8 population SNP79 NA 0 0 SNP129 0 0 6.219 0.119 26869849 NA NA t3818.T000352 qBW-2 1 Bacterial wilt (BW) resistance Composite interval mapping (CIM) F2 population F2 population Ai119F10 NA 0 0 AHS3174 0 0 3.164 0.12 26869849 NA NA t3818.T000353 1 Leaf spot resistance Single Marker Analysis (SMA) Accessions InDel-016 NA 0 0 0 0 0.0099 10.3389/fpls.2015.00988 NA NA t3818.T000354 1 Leaf spot resistance Single Marker Analysis (SMA) Accessions InDel-018 NA 0 0 0 0 <0.0001 10.3389/fpls.2015.00988 NA NA t3818.T000355 1 Leaf spot resistance Single Marker Analysis (SMA) Accessions InDel-032 NA 0 0 0 0 <0.0001 10.3389/fpls.2015.00988 NA NA t3818.T000356 1 Leaf spot resistance Single Marker Analysis (SMA) Accessions InDel-042 NA 0 0 0 0 <0.0001 10.3389/fpls.2015.00988 NA NA t3818.T000357 1 Leaf spot resistance Single Marker Analysis (SMA) Accessions InDel-046 NA 0 0 0 0 <0.0001 10.3389/fpls.2015.00988 NA NA t3818.T000358 1 Tomato spot wilt virus (TSWV) resistance Single Marker Analysis (SMA) Accessions InDel-032 NA 0 0 0 0 <0.0001 10.3389/fpls.2015.00988 NA NA t3818.T000359 1 Tomato spot wilt virus (TSWV) resistance Single Marker Analysis (SMA) Accessions InDel-042 NA 0 0 0 0 <0.0001 10.3389/fpls.2015.00988 NA NA t3818.T000360 1 Tomato spot wilt virus (TSWV) resistance Single Marker Analysis (SMA) Accessions InDel-046 NA 0 0 0 0 0.0053 10.3389/fpls.2015.00988 NA NA t3818.T000361 SI_2012 1 Rust resistance Composite interval mapping (CIM) F6 population F6 population TC7G10 NA 0 0 0 0 17 2.7 7.8 10.1534/g3.115.018796 NA NA t3818.T000362 1 Rust resistance Composite interval mapping (CIM) F6 population F6 population AHS0598 NA 0 0 0 0 38.7 3 8.2 10.1534/g3.115.018796 NA NA t3818.T000363 1 Rust resistance Composite interval mapping (CIM) F6 population F6 population AHGS1350 NA 0 0 AHS2541 0 0 25.4 3.3 13.2 10.1534/g3.115.018796 NA NA t3818.T000364 1 Rust resistance Composite interval mapping (CIM) F6 population F6 population Ah-280 NA 0 0 0 0 35.9 6.9 21.2 10.1534/g3.115.018796 NA NA t3818.T000365 SI_2013 1 Rust resistance Composite interval mapping (CIM) F6 population F6 population Ah-280 NA 0 0 0 0 35.9 3.2 5.8 10.1534/g3.115.018796 NA NA t3818.T000366 TL/LA_2012 1 Rust resistance Composite interval mapping (CIM) F6 population F6 population AHGS1350 NA 0 0 AHS2541 0 0 25.4 4.1 16 10.1534/g3.115.018796 NA NA t3818.T000367 1 Rust resistance Composite interval mapping (CIM) F6 population F6 population Ah-280 NA 0 0 0 0 35.1 2.9 8.9 10.1534/g3.115.018796 NA NA t3818.T000368 TL/LA_2013 1 Rust resistance Composite interval mapping (CIM) F6 population F6 population Ah-280 NA 0 0 0 0 35.9 3.8 12.3 10.1534/g3.115.018796 NA NA t3818.T000369 SL/LA_2012 1 Rust resistance Composite interval mapping (CIM) F6 population F6 population Ah-280 NA 0 0 0 0 35.9 3.8 11.1 10.1534/g3.115.018796 NA NA t3818.T000370 SL/LA_2013 1 Rust resistance Composite interval mapping (CIM) F6 population F6 population Ah-280 NA 0 0 0 0 35.9 3.5 11 10.1534/g3.115.018796 NA NA t3818.T000371 Log_IncPer_2012 1 Rust resistance Composite interval mapping (CIM) F6 population F6 population Ah-280 NA 0 0 Ah-558 0 0 42.9 8.2 59.3 10.1534/g3.115.018796 NA NA t3818.T000372 Log_IncPer_2013 1 Rust resistance Composite interval mapping (CIM) F6 population F6 population AHS2541 NA 0 0 Ah-280 0 0 33.1 7.6 33.9 10.1534/g3.115.018796 NA NA t3818.T000373 Log_SN 1 Rust resistance Composite interval mapping (CIM) F6 population F6 population Ah-280 NA 0 0 0 0 38.9 7.6 34.8 10.1534/g3.115.018796 NA NA t3818.T000374 3 Productivity Composite interval mapping (CIM) F6 population F6 population ML2A05 NA 0 0 0 0 82.3 3.4 8.6 10.1534/g3.115.018796 NA NA t3818.T000375 3 Productivity Composite interval mapping (CIM) F6 population F6 population AHGS2785 NA 0 0 0 0 28 2.6 6.2 10.1534/g3.115.018796 NA NA t3818.T000376 10-SW 3 Productivity Composite interval mapping (CIM) F6 population F6 population AHS1488 NA 0 0 0 0 35.5 3.1 10.3 10.1534/g3.115.018796 NA NA t3818.T000377 3 Productivity Composite interval mapping (CIM) F6 population F6 population AHGS1279 NA 0 0 AHS2728 0 0 68.8 3.9 18.4 10.1534/g3.115.018796 NA NA t3818.T000378 Peg_Length 3 Productivity Composite interval mapping (CIM) F6 population F6 population AHGS2602 NA 0 0 0 0 44.5 2.9 8.3 10.1534/g3.115.018796 NA NA t3818.T000379 4 Seed Characteristics Composite interval mapping (CIM) F6 population F6 population AHGS2019 NA 0 0 Seq12B2 0 0 40.8 3.4 7.2 10.1534/g3.115.018796 NA NA t3818.T000380 4 Seed Characteristics Composite interval mapping (CIM) F6 population F6 population AHGS2155 NA 0 0 0 0 64.9 11.2 25.8 10.1534/g3.115.018796 NA NA t3818.T000381 4 Seed Characteristics Composite interval mapping (CIM) F6 population F6 population AHGS1279 NA 0 0 AHS2728 0 0 70.8 8.7 30.2 10.1534/g3.115.018796 NA NA t3818.T000382 4 Seed Characteristics Composite interval mapping (CIM) F6 population F6 population AHS2897 NA 0 0 0 0 10.4 3.4 6.9 10.1534/g3.115.018796 NA NA t3818.T000383 4 Seed Characteristics Composite interval mapping (CIM) F6 population F6 population AHGS2018 NA 0 0 AHGS2235 0 0 43.7 3 6.3 10.1534/g3.115.018796 NA NA t3818.T000384 4 Seed Characteristics Composite interval mapping (CIM) F6 population F6 population AHGS2332 NA 0 0 0 0 37.1 4.1 9.4 10.1534/g3.115.018796 NA NA t3818.T000385 4 Seed Characteristics Composite interval mapping (CIM) F6 population F6 population AHGS1917 NA 0 0 0 0 64.3 3.4 7.4 10.1534/g3.115.018796 NA NA t3818.T000386 4 Seed Characteristics Composite interval mapping (CIM) F6 population F6 population AHGS2513 NA 0 0 0 0 47 3.5 8 10.1534/g3.115.018796 NA NA t3818.T000387 4 Seed Characteristics Composite interval mapping (CIM) F6 population F6 population AHGS2106 NA 0 0 0 0 25.4 3.7 9.7 10.1534/g3.115.018796 NA NA t3818.T000388 4 Seed Characteristics Composite interval mapping (CIM) F6 population F6 population AHGS1383 NA 0 0 0 0 0 3.5 8.1 10.1534/g3.115.018796 NA NA t3818.T000389 MSH_2009 4 Seed Characteristics Composite interval mapping (CIM) F6 population F6 population AHGS1478_b3 NA 0 0 AHGS2537_b2 0 0 36.3 3.3 7.3 10.1534/g3.115.018796 NA NA t3818.T000390 4 Plant Architecture Composite interval mapping (CIM) F6 population F6 population RN31F06 NA 0 0 0 0 37.8 4.8 14.5 10.1534/g3.115.018796 NA NA t3818.T000391 4 Plant Architecture Composite interval mapping (CIM) F6 population F6 population AHGS1917 NA 0 0 AHGS2155 0 0 64.3 6.5 17.6 10.1534/g3.115.018796 NA NA t3818.T000392 Log_MSH2011 4 Plant Architecture Composite interval mapping (CIM) F6 population F6 population AHGS1228 NA 0 0 0 0 48.7 3.2 8.1 10.1534/g3.115.018796 NA NA t3818.T000393 4 Plant Architecture Composite interval mapping (CIM) F6 population F6 population AHGS2155 NA 0 0 0 0 64.9 4.1 10.7 10.1534/g3.115.018796 NA NA t3818.T000394 4 Plant Architecture Composite interval mapping (CIM) F6 population F6 population AHGS1980 NA 0 0 0 0 41.1 4 10 10.1534/g3.115.018796 NA NA t3818.T000395 MSH_2012 4 Plant Architecture Composite interval mapping (CIM) F6 population F6 population AHS2153 NA 0 0 0 0 13 4.5 11.4 10.1534/g3.115.018796 NA NA t3818.T000396 4 Plant Architecture Composite interval mapping (CIM) F6 population F6 population TC1E06 NA 0 0 0 0 23.2 4 8.1 10.1534/g3.115.018796 NA NA t3818.T000397 4 Plant Architecture Composite interval mapping (CIM) F6 population F6 population AHGS1917 NA 0 0 AHGS2155 0 0 64.3 12.3 30.4 10.1534/g3.115.018796 NA NA t3818.T000398 4 Plant Architecture Composite interval mapping (CIM) F6 population F6 population AHGS1228 NA 0 0 0 0 48.7 3.6 7.4 10.1534/g3.115.018796 NA NA t3818.T000399 5 Oil content GLM procedure WH4416 20 accessions PM204 NA 0 0 0 0 0.0005429 10.1371/journal.pone.0050002 NA NA t3818.T000400 5 Oil content GLM procedure WH4377 20 accessions PM204 NA 0 0 0 0 0.0041 10.1371/journal.pone.0050002 NA NA t3818.T000401 5 Oil content GLM procedure WH4377 20 accessions PM204 NA 0 0 0 0 0.002 10.1371/journal.pone.0050002 NA NA t3818.T000402 5 Oil content GLM procedure WH4377 20 accessions PM204 NA 0 0 0 0 0.0095 10.1371/journal.pone.0050002 NA NA t3818.T000403 5 Oil content GLM procedure WH4398 20 accessions 2A5 NA 0 0 0 0 0.0027 10.1371/journal.pone.0050002 NA NA t3818.T000404 5 Oil content GLM procedure WH4396 20 accessions 2A5 NA 0 0 0 0 0.0078 10.1371/journal.pone.0050002 NA NA t3818.T000405 5 Oil content GLM procedure WH4416 20 accessions 11H1 NA 0 0 0 0 0.0018 10.1371/journal.pone.0050002 NA NA t3818.T000406 5 Oil content GLM procedure WH10034 20 accessions 3B8 NA 0 0 0 0 0.0024 10.1371/journal.pone.0050002 NA NA t3818.T000407 5 Oil content GLM procedure WH4416 20 accessions TC9E8 NA 0 0 0 0 0.0071 10.1371/journal.pone.0050002 NA NA t3818.T000408 QTLR4-LLS01 1 Late leaf spot (LLS) response Composite interval mapping (CIM) RIL-4 population Recombinant inbred lines (RILs) GM1573/GM1009 NA 0 0 pPGPseq8D09 0 0 84.71 - 97.81 13.32 0.26 to 1.23 10.1007/s11032-011-9661-z NA NA t3818.T000409 QTLR4-LLS02 1 Late leaf spot (LLS) response Composite interval mapping (CIM) RIL-4 population Recombinant inbred lines (RILs) GM2009 NA 0 0 GM1536 0 0 4.01 - 6.01 37.38 -0.53 to -1.53 10.1007/s11032-011-9661-z NA NA t3818.T000410 QTLR4-LLS03 1 Late leaf spot (LLS) response Composite interval mapping (CIM) RIL-4 population Recombinant inbred lines (RILs) GM1536 NA 0 0 GM2301/GM2079 0 0 12.51 - 12.81 11 -0.24 to -1.09 10.1007/s11032-011-9661-z NA NA t3818.T000411 QTLR4-LLS04 1 Late leaf spot (LLS) response Composite interval mapping (CIM) RIL-4 population Recombinant inbred lines (RILs) IPAHM103 NA 0 0 GM1954 0 0 14.51 - 20.51 19.86 -0.25 to -1.44 10.1007/s11032-011-9661-z NA NA t3818.T000412 QTLR4-LLS05 1 Late leaf spot (LLS) response Composite interval mapping (CIM) RIL-4 population Recombinant inbred lines (RILs) IPAHM356 NA 0 0 GM1577 0 0 41.01 - 43.21 4.84 0.31 to 0.47 10.1007/s11032-011-9661-z NA NA t3818.T000413 QTLR5-LLS01 1 Late leaf spot (LLS) response Composite interval mapping (CIM) RIL-5 population Recombinant inbred lines (RILs) GM2009 NA 0 0 GM1536 0 0 0.01 26.09 -0.22 to -1.25 10.1007/s11032-011-9661-z NA NA t3818.T000414 QTLR5-LLS02 1 Late leaf spot (LLS) response Composite interval mapping (CIM) RIL-5 population Recombinant inbred lines (RILs) GM2504 NA 0 0 GM2746 0 0 26.71 - 30.71 5.09 0.33 to 0.64 10.1007/s11032-011-9661-z NA NA t3818.T000415 QTLR5-LLS03 1 Late leaf spot (LLS) response Composite interval mapping (CIM) RIL-5 population Recombinant inbred lines (RILs) IPAHM103 NA 0 0 GM1954 0 0 9.41 17.16 -1.43 10.1007/s11032-011-9661-z NA NA t3818.T000416 QTLR5-LLS04 1 Late leaf spot (LLS) response Composite interval mapping (CIM) RIL-5 population Recombinant inbred lines (RILs) RN16F05 NA 0 0 GM1988 0 0 124.11 3.55 -0.48 10.1007/s11032-011-9661-z NA NA t3818.T000417 QTLR5-LLS05 1 Late leaf spot (LLS) response Composite interval mapping (CIM) RIL-5 population Recombinant inbred lines (RILs) GM2746 NA 0 0 GM2689 0 0 42.51 2.62 0.38 10.1007/s11032-011-9661-z NA NA t3818.T000418 QTLR5-LLS06 1 Late leaf spot (LLS) response Composite interval mapping (CIM) RIL-5 population Recombinant inbred lines (RILs) GM2689 NA 0 0 GM2690 0 0 56.91 3.96 -0.32 10.1007/s11032-011-9661-z NA NA t3818.T000419 QTLR5-LLS07 1 Late leaf spot (LLS) response Composite interval mapping (CIM) RIL-5 population Recombinant inbred lines (RILs) GM2690 NA 0 0 TC9F10 0 0 62.61 4.07 -0.34 10.1007/s11032-011-9661-z NA NA t3818.T000420 QTLR5-LLS08 1 Late leaf spot (LLS) response Composite interval mapping (CIM) RIL-5 population Recombinant inbred lines (RILs) GM1090 NA 0 0 GM1771 0 0 65.51 2.92 0.37 10.1007/s11032-011-9661-z NA NA t3818.T000421 QTLR4-Rust01 1 Rust response Composite interval mapping (CIM) RIL-4 population Recombinant inbred lines (RILs) GM2009 NA 0 0 GM1536 0 0 6.01 69.75 -3.42–1.94 10.1007/s11032-011-9661-z NA NA t3818.T000422 QTLR4-Rust02 1 Rust response Composite interval mapping (CIM) RIL-4 population Recombinant inbred lines (RILs) GM1536 NA 0 0 GM2301/GM2079 0 0 12.51 53.61 -1.94–1.69 10.1007/s11032-011-9661-z NA NA t3818.T000423 QTLR4-Rust03 1 Rust response Composite interval mapping (CIM) RIL-4 population Recombinant inbred lines (RILs) IPAHM103 NA 0 0 GM1954 0 0 16.51 - 22.51 78.41 -3.38–1.96 10.1007/s11032-011-9661-z NA NA t3818.T000424 QTLR5-Rust01 1 Rust response Composite interval mapping (CIM) RIL-4 population Recombinant inbred lines (RILs) GM2009 NA 0 0 GM1536 0 0 0.01 36.45 0.21–1.64 10.1007/s11032-011-9661-z NA NA t3818.T000425 QTLR5-Rust02 1 Rust response Composite interval mapping (CIM) RIL-5 population Recombinant inbred lines (RILs) IPAHM103 NA 0 0 GM1954 0 0 5.41 - 13.41 30.78 0.21–1.89 10.1007/s11032-011-9661-z NA NA t3818.T000426 QTLR5-Rust03 1 Rust response Composite interval mapping (CIM) RIL-5 population Recombinant inbred lines (RILs) RN16F05 NA 0 0 GM1988 0 0 124.11 6.19 0.32–0.34 10.1007/s11032-011-9661-z NA NA t3818.T000427 QTLR5-Rust04 1 Rust response Composite interval mapping (CIM) RIL-5 population Recombinant inbred lines (RILs) TC6E01 NA 0 0 RN16F05 0 0 107.81 5.84 0.31 10.1007/s11032-011-9661-z NA NA t3818.T000428 TEWW08_AhVI 1 Transpiration eficiency (TE) Composite interval mapping (CIM) RIL-2 Recombinant inbred lines (RILs) Ah4-101 NA 0 0 GM2536 0 0 34.71 2.202459783 -0.075717 10.1007/s11032-011-9660-0 NA NA t3818.T000429 TEWS08_AhVII 1 Transpiration eficiency (TE) Composite interval mapping (CIM) RIL-2 Recombinant inbred lines (RILs) PM204 NA 0 0 0 0 118.01 2.88488913 0.100753 10.1007/s11032-011-9660-0 NA NA t3818.T000430 TEWS08_AhVIII 1 Transpiration eficiency (TE) Composite interval mapping (CIM) RIL-2 Recombinant inbred lines (RILs) TC9F04 NA 0 0 GM2407 0 0 147.61 3.506836739 -0.14449 10.1007/s11032-011-9660-0 NA NA t3818.T000431 TEWS08_AhVIII 1 Transpiration eficiency (TE) Composite interval mapping (CIM) RIL-2 Recombinant inbred lines (RILs) GM2407 NA 0 0 TC1B02 0 0 165.11 3.629266522 -0.160514 10.1007/s11032-011-9660-0 NA NA t3818.T000432 TEWW08_AhV 1 Transpiration eficiency (TE) Composite interval mapping (CIM) RIL-2 Recombinant inbred lines (RILs) GM1571 NA 0 0 GM1577 0 0 22 - 0.0929 10.1007/s11032-011-9660-0 NA NA t3818.T000433 TEWS08_AhV 1 Transpiration eficiency (TE) Composite interval mapping (CIM) RIL-2 Recombinant inbred lines (RILs) TC2D08-Ah4 NA 0 0 4 0 0 155.81 2.37156587 -0.122943 10.1007/s11032-011-9660-0 NA NA t3818.T000434 TEWW09_AhXIII 1 Transpiration eficiency (TE) Composite interval mapping (CIM) RIL-2 Recombinant inbred lines (RILs) TC4A02 NA 0 0 0 0 28.01 2.23631087 -0.21949 10.1007/s11032-011-9660-0 NA NA t3818.T000435 TEWW09_AhIX 1 Transpiration eficiency (TE) Composite interval mapping (CIM) RIL-2 Recombinant inbred lines (RILs) TC7E04 NA 0 0 GM1949 0 0 8 - 0.2353 10.1007/s11032-011-9660-0 NA NA t3818.T000436 TWW08_AhI 1 Transpiration (T) Composite interval mapping (CIM) RIL-2 Recombinant inbred lines (RILs) GM2724b NA 0 0 S54 0 0 10.81 3.015554348 -138.435775 10.1007/s11032-011-9660-0 NA NA t3818.T000437 TWW08_AhVII 1 Transpiration (T) Composite interval mapping (CIM) RIL-2 Recombinant inbred lines (RILs) GM1979 NA 0 0 GM1919 0 0 8.01 2.237961739 -163.526442 10.1007/s11032-011-9660-0 NA NA t3818.T000438 TWW08_AhXI 1 Transpiration (T) Composite interval mapping (CIM) RIL-2 Recombinant inbred lines (RILs) S1 NA 0 0 0 0 112.11 2.057493261 113.06116 10.1007/s11032-011-9660-0 NA NA t3818.T000439 TWS08_AhIX 1 Transpiration (T) Composite interval mapping (CIM) RIL-2 Recombinant inbred lines (RILs) TC7E04 NA 0 0 GM1949 0 0 16.01 2.222207826 85.724543 10.1007/s11032-011-9660-0 NA NA t3818.T000440 TWS08_AhXIX 1 Transpiration (T) Composite interval mapping (CIM) RIL-2 Recombinant inbred lines (RILs) GM2547 NA 0 0 0 0 1.41 2.09818913 44.59201 10.1007/s11032-011-9660-0 NA NA t3818.T000441 TWW09_AhV 1 Transpiration (T) Composite interval mapping (CIM) RIL-2 Recombinant inbred lines (RILs) gi-832 NA 0 0 TC11H06 0 0 237.01 2.871758478 166.579001 10.1007/s11032-011-9660-0 NA NA t3818.T000442 TWW09_AhVIII 1 Transpiration (T) Composite interval mapping (CIM) RIL-2 Recombinant inbred lines (RILs) GM2407 NA 0 0 TC1B02 0 0 179.11 2.01654913 -196.10367 10.1007/s11032-011-9660-0 NA NA t3818.T000443 TWW09_AhXIII 1 Transpiration (T) Composite interval mapping (CIM) RIL-2 Recombinant inbred lines (RILs) TC4A02 NA 0 0 0 0 28.01 2.084367609 137.688713 10.1007/s11032-011-9660-0 NA NA t3818.T000444 TWW09_AhXX 1 Transpiration (T) Composite interval mapping (CIM) RIL-2 Recombinant inbred lines (RILs) GM2325 NA 0 0 0 0 8.01 2.366106087 -268.227454 10.1007/s11032-011-9660-0 NA NA t3818.T000445 TDWWW09_AhV 4 Total dry weight (TDW) Composite interval mapping (CIM) RIL-2 Recombinant inbred lines (RILs) gi-832 NA 0 0 TC11H06 0 0 237.01 2.725903043 1.081405 10.1007/s11032-011-9660-0 NA NA t3818.T000446 TDWWW09_AhIX 4 Total dry weight (TDW) Composite interval mapping (CIM) RIL-2 Recombinant inbred lines (RILs) TC7E04 NA 0 0 GM1949 0 0 24.01 2.006175 1.942895 10.1007/s11032-011-9660-0 NA NA t3818.T000447 TDWWW09_AhXV 4 Total dry weight (TDW) Composite interval mapping (CIM) RIL-2 Recombinant inbred lines (RILs) GM1021 NA 0 0 GM1570 0 0 72.81 2.485786087 -1.097245 10.1007/s11032-011-9660-0 NA NA t3818.T000448 ShDWWW08_AhIX 4 Shoot dry weight (ShDW) Composite interval mapping (CIM) RIL-2 Recombinant inbred lines (RILs) TC7E04 NA 0 0 GM1949 0 0 14.01 2.214435435 0.577735 10.1007/s11032-011-9660-0 NA NA t3818.T000449 ShDWWW08_AhXI 4 Shoot dry weight (ShDW) Composite interval mapping (CIM) RIL-2 Recombinant inbred lines (RILs) S1 NA 0 0 0 0 112.11 2.08804913 0.357093 10.1007/s11032-011-9660-0 NA NA t3818.T000450 ShDWWW08_AhXV 4 Shoot dry weight (ShDW) Composite interval mapping (CIM) RIL-2 Recombinant inbred lines (RILs) GM1021 NA 0 0 GM1570 0 0 64.81 2.454045217 -0.467064 10.1007/s11032-011-9660-0 NA NA t3818.T000451 ShDWWS08_AhIV 4 Shoot dry weight (ShDW) Composite interval mapping (CIM) RIL-2 Recombinant inbred lines (RILs) PM418 NA 0 0 0 0 24.81 2.202419783 0.148055 10.1007/s11032-011-9660-0 NA NA t3818.T000452 ShDWWS08_AhVII 4 Shoot dry weight (ShDW) Composite interval mapping (CIM) RIL-2 Recombinant inbred lines (RILs) GM1979 NA 0 0 GM1919 0 0 16.01 3.370044348 -0.311905 10.1007/s11032-011-9660-0 NA NA t3818.T000453 SCMRWW09_AhXIX 4 SPAD Chloropyll meter reading (SCMR) Composite interval mapping (CIM) RIL-2 Recombinant inbred lines (RILs) GM1971 NA 0 0 Seq2D12B 0 0 34.4 1.807 10.1007/s11032-011-9660-0 NA NA t3818.T000454 HI WW 08_AhI 5 Harvest index (HI) Composite interval mapping (CIM) RIL-3 Recombinant inbred lines (RILs) GM1959 NA 0 0 IPAHM97 0 0 6.01 2.3 -0.03238 10.1007/s11032-011-9660-0 NA NA t3818.T000455 HI WW 08_AhIX 5 Harvest index (HI) Composite interval mapping (CIM) RIL-3 Recombinant inbred lines (RILs) GM1922 NA 0 0 GM2050 0 0 12.01 2.42 -0.050324 10.1007/s11032-011-9660-0 NA NA t3818.T000456 HI WW 08_AhXV 5 Harvest index (HI) Composite interval mapping (CIM) RIL-3 Recombinant inbred lines (RILs) Seq17F06 NA 0 0 0 0 0 2.66 0.042 10.1007/s11032-011-9660-0 NA NA t3818.T000457 HI WS 08_AhXV 5 Harvest index (HI) Composite interval mapping (CIM) RIL-3 Recombinant inbred lines (RILs) TC11H06 NA 0 0 GM2584 0 0 64.2 - 0.0221 10.1007/s11032-011-9660-0 NA NA t3818.T000458 VegWt/pl WW 08_AhIX 4 Vegetative weight/plant (VegWt/pl) Composite interval mapping (CIM) RIL-3 Recombinant inbred lines (RILs) GM1922 NA 0 0 GM2050 0 0 0 - 5.9862 10.1007/s11032-011-9660-0 NA NA t3818.T000459 1 Transpiration Interval mapping to identify mai RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 10.86 10.1007/s00122-010-1517-0 NA NA t3818.T000460 1 Transpiration efficiency (TE) Interval mapping to identify mai RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 12.3 10.1007/s00122-010-1517-0 NA NA t3818.T000461 4 Specific leaf area (SLA) Interval mapping to identify mai RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 13.29 10.1007/s00122-010-1517-0 NA NA t3818.T000462 4 Leaf area Interval mapping to identify mai RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 11.51 10.1007/s00122-010-1517-0 NA NA t3818.T000463 4 SPAD chlorophyll meter readings (SCMR) Interval mapping to identify mai RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 19.53 10.1007/s00122-010-1517-0 NA NA t3818.T000464 4 Carbon isotope discrimination ratio Interval mapping to identify mai RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 12.15 10.1007/s00122-010-1517-0 NA NA t3818.T000465 4 Biomass Interval mapping to identify mai RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 20.32 10.1007/s00122-010-1517-0 NA NA t3818.T000466 1 Canopy conductance Interval mapping to identify mai RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 22.24 10.1007/s00122-010-1517-0 NA NA t3818.T000467 4 Total dry matter (TDM) Interval mapping to identify mai RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 9.85 10.1007/s00122-010-1517-0 NA NA t3818.T000468 4 Dry weight (DW) Interval mapping to identify mai RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 9.18 10.1007/s00122-010-1517-0 NA NA t3818.T000469 4 Pod weight Interval mapping to identify mai RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 7.23 10.1007/s00122-010-1517-0 NA NA t3818.T000470 4 Seed weight Interval mapping to identify mai RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 8.22 10.1007/s00122-010-1517-0 NA NA t3818.T000471 4 Haulm weight Interval mapping to identify mai RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 33.36 10.1007/s00122-010-1517-0 NA NA t3818.T000472 1 Transpiration Interval mapping to identify mai RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 6.27 10.1007/s00122-010-1517-0 NA NA t3818.T000473 1 Transpiration efficiency (TE) Interval mapping to identify mai RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 6.33 10.1007/s00122-010-1517-0 NA NA t3818.T000474 4 Specific leaf area (SLA) Interval mapping to identify mai RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 10.97 10.1007/s00122-010-1517-0 NA NA t3818.T000475 4 Leaf area Interval mapping to identify mai RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 7.53 10.1007/s00122-010-1517-0 NA NA t3818.T000476 4 SPAD chlorophyll meter readings (SCMR) Interval mapping to identify mai RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 7.71 10.1007/s00122-010-1517-0 NA NA t3818.T000477 4 Carbon isotope discrimination ratio Interval mapping to identify mai RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 7.45 10.1007/s00122-010-1517-0 NA NA t3818.T000478 4 Biomass Interval mapping to identify mai RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 9.65 10.1007/s00122-010-1517-0 NA NA t3818.T000479 1 Canopy conductance Interval mapping to identify mai RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 15.01 10.1007/s00122-010-1517-0 NA NA t3818.T000480 4 Total dry matter (TDM) Interval mapping to identify mai RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 8.72 10.1007/s00122-010-1517-0 NA NA t3818.T000481 4 Dry weight (DW) Interval mapping to identify mai RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 9 10.1007/s00122-010-1517-0 NA NA t3818.T000482 4 Pod weight Interval mapping to identify mai RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 9.64 10.1007/s00122-010-1517-0 NA NA t3818.T000483 4 Seed weight Interval mapping to identify mai RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 7.93 10.1007/s00122-010-1517-0 NA NA t3818.T000484 4 Haulm weight Interval mapping to identify mai RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 - 10.1007/s00122-010-1517-0 NA NA t3818.T000485 1 Transpiration Epistatic interaction analysis ( RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 11.29 10.1007/s00122-010-1517-0 NA NA t3818.T000486 1 Transpiration efficiency (TE) Epistatic interaction analysis ( RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 22.06 10.1007/s00122-010-1517-0 NA NA t3818.T000487 4 Specific leaf area (SLA) Epistatic interaction analysis ( RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 25.03 10.1007/s00122-010-1517-0 NA NA t3818.T000488 4 Leaf area Epistatic interaction analysis ( RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 11.18 10.1007/s00122-010-1517-0 NA NA t3818.T000489 4 SPAD chlorophyll meter readings (SCMR) Epistatic interaction analysis ( RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 - 10.1007/s00122-010-1517-0 NA NA t3818.T000490 4 Carbon isotope discrimination ratio Epistatic interaction analysis ( RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 - 10.1007/s00122-010-1517-0 NA NA t3818.T000491 4 Biomass Epistatic interaction analysis ( RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 16.28 10.1007/s00122-010-1517-0 NA NA t3818.T000492 1 Canopy conductance (ISC) Epistatic interaction analysis ( RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 22.5 10.1007/s00122-010-1517-0 NA NA t3818.T000493 4 Total dry matter (TDM) Epistatic interaction analysis ( RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 13.67 10.1007/s00122-010-1517-0 NA NA t3818.T000494 4 Dry weight (DW) Epistatic interaction analysis ( RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 44.72 10.1007/s00122-010-1517-0 NA NA t3818.T000495 4 Pod weight Epistatic interaction analysis ( RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 21.83 10.1007/s00122-010-1517-0 NA NA t3818.T000496 4 Seed weight Epistatic interaction analysis ( RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 16.96 10.1007/s00122-010-1517-0 NA NA t3818.T000497 4 Haulm weight Epistatic interaction analysis ( RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 31.43 10.1007/s00122-010-1517-0 NA NA t3818.T000498 1 Transpiration Epistatic interaction analysis ( RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 20.2 10.1007/s00122-010-1517-0 NA NA t3818.T000499 1 Transpiration efficiency (TE) Epistatic interaction analysis ( RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 15.44 10.1007/s00122-010-1517-0 NA NA t3818.T000500 4 Specific leaf area (SLA) Epistatic interaction analysis ( RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 16.2 10.1007/s00122-010-1517-0 NA NA t3818.T000501 4 Leaf area Epistatic interaction analysis ( RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 - 10.1007/s00122-010-1517-0 NA NA t3818.T000502 4 SPAD chlorophyll meter readings (SCMR) Epistatic interaction analysis ( RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 - 10.1007/s00122-010-1517-0 NA NA t3818.T000503 4 Carbon isotope discrimination ratio Epistatic interaction analysis ( RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 - 10.1007/s00122-010-1517-0 NA NA t3818.T000504 4 Biomass Epistatic interaction analysis ( RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 11.18 10.1007/s00122-010-1517-0 NA NA t3818.T000505 1 Canopy conductance (ISC) Epistatic interaction analysis ( RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 19.02 10.1007/s00122-010-1517-0 NA NA t3818.T000506 4 Total dry matter (TDM) Epistatic interaction analysis ( RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 13.15 10.1007/s00122-010-1517-0 NA NA t3818.T000507 4 Dry weight (DW) Epistatic interaction analysis ( RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 18.97 10.1007/s00122-010-1517-0 NA NA t3818.T000508 4 Pod weight Epistatic interaction analysis ( RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 13.74 10.1007/s00122-010-1517-0 NA NA t3818.T000509 4 Seed weight Epistatic interaction analysis ( RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 12.58 10.1007/s00122-010-1517-0 NA NA t3818.T000510 4 Haulm weight Epistatic interaction analysis ( RIL mapping population Recombinant inbred lines (RILs) NA 0 0 0 0 21.13 10.1007/s00122-010-1517-0 NA NA t3818.T000511 QTLLLS01 1 Late leaf spot (LLS) response Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) PM436 NA 0 0 Lec-1 0 0 44 - 46 3.32 6.5 10.1007/s00122-010-1366-x NA NA t3818.T000512 QTLLLS02 1 Late leaf spot (LLS) response Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) TC9F10 NA 0 0 GM660 0 0 0 2.8 4.4 10.1007/s00122-010-1366-x NA NA t3818.T000513 QTLLLS03 1 Late leaf spot (LLS) response Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) TC2G05 NA 0 0 TC9H09 0 0 0 5.11 4.8 10.1007/s00122-010-1366-x NA NA t3818.T000514 QTLLLS04 1 Late leaf spot (LLS) response Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) TC1A01 NA 0 0 pPGSseq18G1 0 0 12 5.11 1.8 10.1007/s00122-010-1366-x NA NA t3818.T000515 QTLLLS05 1 Late leaf spot (LLS) response Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) gi1107 NA 0 0 pPGSseq7G2 0 0 48 - 50 2.96 2.9 10.1007/s00122-010-1366-x NA NA t3818.T000516 QTLLLS06 1 Late leaf spot (LLS) response Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) IPAHM524 NA 0 0 TC4D09 0 0 18 6.03 4.4 10.1007/s00122-010-1366-x NA NA t3818.T000517 QTLLLS07 1 Late leaf spot (LLS) response Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) PM179 NA 0 0 GM633 0 0 0 - 4 6.03 4.8 10.1007/s00122-010-1366-x NA NA t3818.T000518 QTLLLS08 1 Late leaf spot (LLS) response Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) pPGSseq13E6 NA 0 0 PM3 0 0 2 2.61 4.9 10.1007/s00122-010-1366-x NA NA t3818.T000519 QTLLLS09 1 Late leaf spot (LLS) response Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) TC5A07 NA 0 0 IPAHM395 0 0 0 5.68 4.3 10.1007/s00122-010-1366-x NA NA t3818.T000520 QTLLLS10 1 Late leaf spot (LLS) response Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) IPAHM103 NA 0 0 pPGSseq19D6 0 0 0 2.95 2.6 10.1007/s00122-010-1366-x NA NA t3818.T000521 QTLLLS11 1 Late leaf spot (LLS) response Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) TC7H11 NA 0 0 IPAHM176 0 0 18 2.79 2 10.1007/s00122-010-1366-x NA NA t3818.T000522 QTLLLSQE01 1 Late leaf spot (LLS) stage I Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) gi-1107 NA 0 0 pPGSseq7G2 0 0 56 3.47 1.7 10.1007/s00122-010-1366-x NA NA t3818.T000523 QTLLLSQE02 1 Late leaf spot (LLS) stage I Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) TC2G05 NA 0 0 TC9H09 0 0 0 3.51 2.2 10.1007/s00122-010-1366-x NA NA t3818.T000524 QTLLLSQE03 1 Late leaf spot (LLS) stage I Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) TC5A07 NA 0 0 IPAHM395 0 0 0 2.5 1.9 10.1007/s00122-010-1366-x NA NA t3818.T000525 QTLLLSQE01 1 Late leaf spot (LLS) stage II Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) gi-1107 NA 0 0 pPGSseq7G2 0 0 54 4.04 3.2 10.1007/s00122-010-1366-x NA NA t3818.T000526 QTLLLSQE04 1 Late leaf spot (LLS) stage II Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) PM179 NA 0 0 GM633 0 0 2 2.74 2.6 10.1007/s00122-010-1366-x NA NA t3818.T000527 QTLLLSQE02 1 Late leaf spot (LLS) stage II Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) TC2G05 NA 0 0 TC9H09 0 0 0 5.22 5.7 10.1007/s00122-010-1366-x NA NA t3818.T000528 QTLLLSQE03 1 Late leaf spot (LLS) stage II Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) TC5A07 NA 0 0 IPAHM395 0 0 0 2.68 2.1 10.1007/s00122-010-1366-x NA NA t3818.T000529 QTLrust01 1 Rust response Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) IPAHM103 NA 0 0 pPGSseq19D6 0 0 0 - 12 44.32 6.90–55.20 10.1007/s00122-010-1366-x NA NA t3818.T000530 QTLrust02 1 Rust response Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) PM436 NA 0 0 Lec-1 0 0 46 3.51 2.20–4.50 10.1007/s00122-010-1366-x NA NA t3818.T000531 QTLrust03 1 Rust response Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) TC11A04 NA 0 0 IPAHM524 0 0 16 3.51 2.1 10.1007/s00122-010-1366-x NA NA t3818.T000532 QTLrust04 1 Rust response Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) TC1B02 NA 0 0 TC9F04 0 0 0 - 14 4.91 1.70–5.20 10.1007/s00122-010-1366-x NA NA t3818.T000533 QTLrust05 1 Rust response Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) TC4E09 NA 0 0 IPAHM121 0 0 24 2.59 2.6 10.1007/s00122-010-1366-x NA NA t3818.T000534 QTLrust06 1 Rust response Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) pPGSseq13E6 NA 0 0 PM3 0 0 20 4.24 4.9 10.1007/s00122-010-1366-x NA NA t3818.T000535 QTLrust07 1 Rust response Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) pPGSseq19G7 NA 0 0 TC2C07 0 0 76 3.15 2 10.1007/s00122-010-1366-x NA NA t3818.T000536 QTLrust08 1 Rust response Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) TC2G05 NA 0 0 TC9H09 0 0 2 3.09 2.3 10.1007/s00122-010-1366-x NA NA t3818.T000537 QTLrust09 1 Rust response Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) GM624 NA 0 0 TC4G10 0 0 14 3.87 2.80–7.00 10.1007/s00122-010-1366-x NA NA t3818.T000538 QTLrust10 1 Rust response Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) PM434 NA 0 0 TC4F02 0 0 4 3.16 6.8 10.1007/s00122-010-1366-x NA NA t3818.T000539 QTLrust11 1 Rust response Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) TC9H09 NA 0 0 GM624 0 0 12 2.8 6 10.1007/s00122-010-1366-x NA NA t3818.T000540 QTLrust12 1 Rust response Composite interval mapping (CIM) 268 RILs Recombinant inbred lines (RILs) PM377 NA 0 0 TC1A01 0 0 0 2.53 3.9 10.1007/s00122-010-1366-x NA NA t3818.T000541 T04_IV 1 Transpiration Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) pPGSSeq9G05 NA 0 0 0 0 17.6 4.26 10.3 10.1007/s00122-008-0933-x NA NA t3818.T000542 T05_VII 1 Transpiration Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) GM736 NA 0 0 0 0 10.4 4.49 5.7 10.1007/s00122-008-0933-x NA NA t3818.T000543 T05_V 1 Transpiration Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) RN6F05 NA 0 0 0 0 7.6 5.29 7.9 10.1007/s00122-008-0933-x NA NA t3818.T000544 T05_XI 1 Transpiration Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) GM672 NA 0 0 0 0 12.3 3.46 4.7 10.1007/s00122-008-0933-x NA NA t3818.T000545 TE04_VII 1 Transpiration efficient Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) PM427 NA 0 0 0 0 2.1 5.96 8.9 10.1007/s00122-008-0933-x NA NA t3818.T000546 TE05_III 1 Transpiration efficient Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) pPGSSeq9H08b NA 0 0 0 0 0.1 4 5.8 10.1007/s00122-008-0933-x NA NA t3818.T000547 TE05_VII 1 Transpiration efficient Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) LG111 NA 0 0 0 0 8.7 6.04 8.1 10.1007/s00122-008-0933-x NA NA t3818.T000548 TE05_XIII 1 Transpiration efficient Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) TC9B07 NA 0 0 0 0 78.5 2.88 8 10.1007/s00122-008-0933-x NA NA t3818.T000549 SLAPreTrt04_VII 4 Specific leaf area (SLA) Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) PM427 NA 0 0 0 0 0.1 2.97 3.5 10.1007/s00122-008-0933-x NA NA t3818.T000550 SLAPreTrt04_VIII 4 Specific leaf area (SLA) Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) PM721 NA 0 0 0 0 76.2 7.89 17.6 10.1007/s00122-008-0933-x NA NA t3818.T000551 SLAPreTrt04_XIII 4 Specific leaf area (SLA) Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) TC9B07 NA 0 0 0 0 64.9 3.96 7.6 10.1007/s00122-008-0933-x NA NA t3818.T000552 SLAPreTrt04_IV 4 Specific leaf area (SLA) Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) PM183 NA 0 0 0 0 73.8 3.01 8.4 10.1007/s00122-008-0933-x NA NA t3818.T000553 SLAPreTrt04_XXII 4 Specific leaf area (SLA) Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) GM625 NA 0 0 0 0 30 5.57 13 10.1007/s00122-008-0933-x NA NA t3818.T000554 SLAHar04_XI 4 Specific leaf area (SLA) Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) GM672 NA 0 0 0 0 12.3 4.33 6.1 10.1007/s00122-008-0933-x NA NA t3818.T000555 SLAHar04_IV 4 Specific leaf area (SLA) Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) pPGSSeq19H03 NA 0 0 0 0 33.3 3.57 5.1 10.1007/s00122-008-0933-x NA NA t3818.T000556 SLAPreTrt05_VI 4 Specific leaf area (SLA) Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) IPAHM689 NA 0 0 0 0 37.1 4.53 6.5 10.1007/s00122-008-0933-x NA NA t3818.T000557 SLAPreTrt05_VIIIa 4 Specific leaf area (SLA) Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) PM721 NA 0 0 0 0 76.1 6.3 14.1 10.1007/s00122-008-0933-x NA NA t3818.T000558 SLAPreTrt05_VIIIb 4 Specific leaf area (SLA) Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) TC9F10 NA 0 0 0 0 86.5 3.96 5.8 10.1007/s00122-008-0933-x NA NA t3818.T000559 SLAPreTrt05_XV 4 Specific leaf area (SLA) Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) PM85 NA 0 0 0 0 15.8 3.43 5.3 10.1007/s00122-008-0933-x NA NA t3818.T000560 SLAHar05_XI 4 Specific leaf area (SLA) Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) TC2D06 NA 0 0 0 0 12.6 3.72 5.6 10.1007/s00122-008-0933-x NA NA t3818.T000561 SLAHar05_XVI 4 Specific leaf area (SLA) Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) GM694 NA 0 0 0 0 19.4 3.3 4.2 10.1007/s00122-008-0933-x NA NA t3818.T000562 SLAHar05_XVII 4 Specific leaf area (SLA) Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) IPAHM105 NA 0 0 0 0 0.1 3.45 4.2 10.1007/s00122-008-0933-x NA NA t3818.T000563 SPADPreTrt04_VIII 4 SPAD chlorophyll meter reading (SCMR) Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) GM679 NA 0 0 0 0 78.7 5.28 7.1 10.1007/s00122-008-0933-x NA NA t3818.T000564 SPADPreTrt04_XVI 4 SPAD chlorophyll meter reading (SCMR) Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) pPGPSeq2B09 NA 0 0 0 0 2.3 6.02 10.6 10.1007/s00122-008-0933-x NA NA t3818.T000565 SPADD005_XIII 4 SPAD chlorophyll meter reading (SCMR) Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) TC9B07 NA 0 0 0 0 66.5 5.41 11 10.1007/s00122-008-0933-x NA NA t3818.T000566 SPADD005_X 4 SPAD chlorophyll meter reading (SCMR) Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) pPGSSeq19A05 NA 0 0 0 0 5.7 4.11 6.5 10.1007/s00122-008-0933-x NA NA t3818.T000567 SPADD005_XVII 4 SPAD chlorophyll meter reading (SCMR) Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) IPAHM105 NA 0 0 0 0 0.1 4.47 6 10.1007/s00122-008-0933-x NA NA t3818.T000568 SPADD505_XVI 4 SPAD chlorophyll meter reading (SCMR) Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) pPGPSeq2B09 NA 0 0 0 0 4 4.18 7.6 10.1007/s00122-008-0933-x NA NA t3818.T000569 SPADStresStrt04_VIII 4 SPAD at stage of harvest Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) GM660 NA 0 0 0 0 77.1 5.16 8.7 10.1007/s00122-008-0933-x NA NA t3818.T000570 SPADStresStrt04_XVI 4 SPAD at stage of harvest Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) pPGPSeq2B09 NA 0 0 0 0 2.1 4.58 8.2 10.1007/s00122-008-0933-x NA NA t3818.T000571 SPADD7UndrStres04_Xia 4 SPAD at stage of harvest Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) Ah-193 NA 0 0 0 0 2.1 3.21 5.1 10.1007/s00122-008-0933-x NA NA t3818.T000572 SPADD7UndrStres04_Xib 4 SPAD at stage of harvest Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) TC2D06 NA 0 0 0 0 14.6 3.2 4.9 10.1007/s00122-008-0933-x NA NA t3818.T000573 SPADD7UndrStres04_IV 4 SPAD at stage of harvest Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) GM723b NA 0 0 0 0 28.9 3.13 4.7 10.1007/s00122-008-0933-x NA NA t3818.T000574 SPAD10Har04_VI 4 SPAD at stage of harvest Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) TC1A01 NA 0 0 0 0 18.6 4.58 7.4 10.1007/s00122-008-0933-x NA NA t3818.T000575 SPADD1005_X 4 SPAD at stage of harvest Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) IPAHM165 NA 0 0 0 0 0.1 4.23 5.7 10.1007/s00122-008-0933-x NA NA t3818.T000576 SPADD1005_XVII 4 SPAD at stage of harvest Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) IPAHM105 NA 0 0 0 0 0.1 3.03 4.1 10.1007/s00122-008-0933-x NA NA t3818.T000577 SPADD1505_X 4 SPAD at stage of harvest Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) IPAHM165 NA 0 0 0 0 0.1 3.64 5.1 10.1007/s00122-008-0933-x NA NA t3818.T000578 SPADD1505_XVII 4 SPAD at stage of harvest Composite interval mapping (CIM) A RIL mapping population Recombinant inbred lines (RILs) IPAHM105 NA 0 0 0 0 0.1 2.08 2.9 10.1007/s00122-008-0933-x NA NA t3818.T000579 qTSWV1 1 Tomato spotted wilt virus (TSWV) resistance The porogram Map QTL Integrated genetic linkage map 2 Recombinant inbred lines (RILs) IPAHM287 NA 0 0 0 0 24.12 12.9 10.1007/s00122-011-1737-y NA NA t3818.T000580 qTSWV2 1 Tomato spotted wilt virus (TSWV) resistance The porogram Map QTL Integrated genetic linkage map 2 Recombinant inbred lines (RILs) Seq12F7 NA 0 0 0 0 4.56 35.8 10.1007/s00122-011-1737-y NA NA t3818.T000581 qBWA03 1 Bacterial wilt resistance QTL mapping Yuanza9102 × wt09-0023 F8:10 A03.128299006 NA 0 0 A03.128522169 0 0 101.7 - 102.4 2.6–5.7 10.1007/s00122-022-04033-y NA NA t3818.T000582 qBWA12 1 Bacterial wilt resistance QTL mapping Yuanza9102 × wt09-0023 F8:10 A12.4210453 NA 0 0 A12.4601283 0 0 29.1 - 31.8 32.8–66.0 10.1007/s00122-022-04033-y NA NA t3818.T000583 qBWA14 1 Bacterial wilt resistance QTL mapping Yuanza9102 × wt09-0023 F8:10 A14.9011103 NA 0 0 A14.9111536 0 0 59.4 - 60 3.0–4.9 10.1007/s00122-022-04033-y NA NA t3818.T000584 qBWA20 1 Bacterial wilt resistance QTL mapping Yuanza9102 × wt09-0023 F8:10 A20.141889915 NA 0 0 A20.141884654 0 0 182.6 - 182.8 2.5–4.4 10.1007/s00122-022-04033-y NA NA t3818.T000585 qPSIIA05 1 Resistance to Aspergillus flavus infection QTL mapping Zhonghua 16 × J11 RIL c05b092 NA 0 0 c05b093 0 0 56.5 - 57.5 3.17 10.3389/fpls.2021.745408 NA NA t3818.T000586 qPSIIA08 1 Resistance to Aspergillus flavus infection QTL mapping Zhonghua 16 × J11 RIL c08b121 NA 0 0 c08b122 0 0 53.5 - 54.5 5.97 10.3389/fpls.2021.745408 NA NA t3818.T000587 qPSIIB01 1 Resistance to Aspergillus flavus infection QTL mapping Zhonghua 16 × J11 RIL c11b078 NA 0 0 c11b079 0 0 43.5 - 44.5 2.63 10.3389/fpls.2021.745408 NA NA t3818.T000588 qPSIIB03.a 1 Resistance to Aspergillus flavus infection QTL mapping Zhonghua 16 × J11 RIL c13b091 NA 0 0 c13b092 0 0 52.5 - 53.5 5.16, 3.91 10.3389/fpls.2021.745408 NA NA t3818.T000589 qPSIIB03.b 1 Resistance to Aspergillus flavus infection QTL mapping Zhonghua 16 × J11 RIL c13b049 NA 0 0 c13b050 0 0 36.5 - 37.5 2.74, 2.75 10.3389/fpls.2021.745408 NA NA t3818.T000590 qPSIIB10 1 Resistance to Aspergillus flavus infection QTL mapping Zhonghua 16 × J11 RIL c20b057 NA 0 0 c20b058 0 0 32.5 - 33.5 5.39, 5.28, 4.92, 2.84 10.3389/fpls.2021.745408 NA NA t3818.T000591 qNPPP–Ah02-1 3 Number of pods per plant Interval mapping TMV 2 × TMV 2-NLM RIL Ah02_100281747 NA 0 0 Ah02_1558084 0 0 48.68 9.6 10.3389/fpls.2021.668020 NA NA t3818.T000592 qNPPP–Ah04-1 3 Number of pods per plant Interval mapping TMV 2 × TMV 2-NLM RIL AhTE0087 NA 0 0 TC11H06 0 0 11.01 3.8 10.3389/fpls.2021.668020 NA NA t3818.T000593 qNPPP–Ah08-1 3 Number of pods per plant Interval mapping TMV 2 × TMV 2-NLM RIL Ah14_9821695 NA 0 0 Ah18_16150988 0 0 60.57 3.8 10.3389/fpls.2021.668020 NA NA t3818.T000594 qNPPP–Ah10-1 3 Number of pods per plant Interval mapping TMV 2 × TMV 2-NLM RIL AhTE2086 NA 0 0 Ah10_80636009 0 0 24.63 4.2 10.3389/fpls.2021.668020 NA NA t3818.T000595 qNPPP–Ah12-1 3 Number of pods per plant Interval mapping TMV 2 × TMV 2-NLM RIL AhTE0357 NA 0 0 Ah12_3757437 0 0 39.3 3.5 10.3389/fpls.2021.668020 NA NA t3818.T000596 qNPPP–Ah13-1 3 Number of pods per plant Interval mapping TMV 2 × TMV 2-NLM RIL Ah13_145417249 NA 0 0 Ah03_34691790 0 0 125.9 – 126.9 3.8 – 4.4 10.3389/fpls.2021.668020 NA NA t3818.T000597 qNPPP–Ah14-1 3 Number of pods per plant Interval mapping TMV 2 × TMV 2-NLM RIL AhTE0050 NA 0 0 AhTE0107 0 0 20.11 3.3 10.3389/fpls.2021.668020 NA NA t3818.T000598 qNPPP–Ah14-2 3 Number of pods per plant Interval mapping TMV 2 × TMV 2-NLM RIL Ah14_11013075 NA 0 0 Ah20_134973352 0 0 97.01 3.7 10.3389/fpls.2021.668020 NA NA t3818.T000599 qNPPP–Ah14-3 3 Number of pods per plant Interval mapping TMV 2 × TMV 2-NLM RIL Ah11_1177069 NA 0 0 Ah14_4643565 0 0 133.53 7.7 10.3389/fpls.2021.668020 NA NA t3818.T000600 qPWPP–Ah01-1 3 Pod weight per plant Interval mapping TMV 2 × TMV 2-NLM RIL AhTE1333 NA 0 0 Ah01_38932929 0 0 59.13 3.3 10.3389/fpls.2021.668020 NA NA t3818.T000601 qPWPP–Ah02-1 3 Pod weight per plant Interval mapping TMV 2 × TMV 2-NLM RIL Ah02_100281747 NA 0 0 Ah02_1558084 0 0 47.68 4 – 10.6 10.3389/fpls.2021.668020 NA NA t3818.T000602 qTW_Ah02-1 3 Test Weight Interval mapping TMV 2 × TMV 2-NLM RIL Ah02_100281747 _ Ah02_1558084 NA 0 0 0 0 47.68 3.0 – 3.5 10.3389/fpls.2021.668020 NA NA t3818.T000603 qTW–Ah02-2 3 Test Weight Interval mapping TMV 2 × TMV 2-NLM RIL Ah02_1016757 NA 0 0 Ah02_99398367 0 0 51.7 – 51.7 3.7 – 3.8 10.3389/fpls.2021.668020 NA NA t3818.T000604 qTW–Ah02-3 3 Test Weight Interval mapping TMV 2 × TMV 2-NLM RIL Ah02_2177038 NA 0 0 Ah02_2699680 0 0 52.99 5.2 10.3389/fpls.2021.668020 NA NA t3818.T000605 qTW–Ah02-4 3 Test Weight Interval mapping TMV 2 × TMV 2-NLM RIL Ah02_2703191 NA 0 0 Ah02_91203877 0 0 54.4 – 55.4 3.5 – 3.7 10.3389/fpls.2021.668020 NA NA t3818.T000606 qTW–Ah03-1 3 Test Weight Interval mapping TMV 2 × TMV 2-NLM RIL AhTE0566 NA 0 0 AhTE0305 0 0 102.12 3.4 10.3389/fpls.2021.668020 NA NA t3818.T000607 qTW–Ah12-1 3 Test Weight Interval mapping TMV 2 × TMV 2-NLM RIL Ah12_2448727 NA 0 0 Ah12_3356239 0 0 126.56 4.5 10.3389/fpls.2021.668020 NA NA t3818.T000608 qTW–Ah12-2 3 Test Weight Interval mapping TMV 2 × TMV 2-NLM RIL Ah12_2862477 NA 0 0 Ah12_3356216 0 0 127.41 5.3 10.3389/fpls.2021.668020 NA NA t3818.T000609 qTW–Ah12-3 3 Test Weight Interval mapping TMV 2 × TMV 2-NLM RIL Ah12_3356216 NA 0 0 Ah12_56428938 0 0 127.4 – 127.4 5.9 – 6.1 10.3389/fpls.2021.668020 NA NA t3818.T000610 qTW–Ah12-4 3 Test Weight Interval mapping TMV 2 × TMV 2-NLM RIL Ah12_1893158 NA 0 0 Ah12_12348612 0 0 131.53 3.1 10.3389/fpls.2021.668020 NA NA t3818.T000611 qTW–Ah20-1 3 Test Weight Interval mapping TMV 2 × TMV 2-NLM RIL Ah20_54597607 NA 0 0 Ah20_47936254 0 0 33.35 3.2 – 3.7 10.3389/fpls.2021.668020 NA NA t3818.T000612 qTW–Ah20-2 3 Test Weight Interval mapping TMV 2 × TMV 2-NLM RIL Ah20_47936254 NA 0 0 Ah20_6952934 0 0 34.8 – 34.8 3.4 – 3.6 10.3389/fpls.2021.668020 NA NA t3818.T000613 qTW–Ah20-3 3 Test Weight Interval mapping TMV 2 × TMV 2-NLM RIL Ah20_117411328 NA 0 0 Ah20_74165219 0 0 44.17 3.4 10.3389/fpls.2021.668020 NA NA t3818.T000614 qSP–Ah01-1 3 Shelling percentage Interval mapping TMV 2 × TMV 2-NLM RIL AhTE1345 NA 0 0 AhTE0281 0 0 52.48 3.2 10.3389/fpls.2021.668020 NA NA t3818.T000615 qSP–Ah02-1 3 Shelling percentage Interval mapping TMV 2 × TMV 2-NLM RIL Ah02_100281747 NA 0 0 Ah02_1558084 0 0 47.68 5.7 10.3389/fpls.2021.668020 NA NA t3818.T000616 qSP–Ah05-1 3 Shelling percentage Interval mapping TMV 2 × TMV 2-NLM RIL AhTE0470 NA 0 0 AhTE0275 0 0 116.3 3.4 10.3389/fpls.2021.668020 NA NA t3818.T000617 qSP–Ah09-1 3 Shelling percentage Interval mapping TMV 2 × TMV 2-NLM RIL Ah09_42315489 NA 0 0 AhTE0381 0 0 54.9 3.4 10.3389/fpls.2021.668020 NA NA t3818.T000618 qSP–Ah10-1 3 Shelling percentage Interval mapping TMV 2 × TMV 2-NLM RIL Ah10_49312986 NA 0 0 AhTE0162 0 0 71.54 5.4 10.3389/fpls.2021.668020 NA NA t3818.T000619 qSP–Ah10-2 3 Shelling percentage Interval mapping TMV 2 × TMV 2-NLM RIL Ah10_49231630 NA 0 0 Ah10_5172296 0 0 73.2 – 73.2 3.9 – 4.1 10.3389/fpls.2021.668020 NA NA t3818.T000620 qSP–Ah11-1 3 Shelling percentage Interval mapping TMV 2 × TMV 2-NLM RIL AhTE0120 NA 0 0 AhTE0678 0 0 30.26 4.8 10.3389/fpls.2021.668020 NA NA t3818.T000621 qSP–Ah13-1 3 Shelling percentage Interval mapping TMV 2 × TMV 2-NLM RIL Ah13_80163117 NA 0 0 Ah13_50074616 0 0 163.34 3.2 – 35.5 10.3389/fpls.2021.668020 NA NA t3818.T000622 qSP–Ah16-1 3 Shelling percentage Interval mapping TMV 2 × TMV 2-NLM RIL AhTE0060 NA 0 0 Ah16_77480103 0 0 13.1 4.1 – 6.6 10.3389/fpls.2021.668020 NA NA t3818.T000623 qSP–Ah20-1 3 Shelling percentage Interval mapping TMV 2 × TMV 2-NLM RIL Ah20_69125023 NA 0 0 AhTE0893 0 0 49.95 3.5 10.3389/fpls.2021.668020 NA NA t3818.T000624 qPC–Ah05-1 5 Protein content Interval mapping TMV 2 × TMV 2-NLM RIL AhTE0005 NA 0 0 AhTE0523 0 0 98.71 3.1 – 3.8 10.3389/fpls.2021.668020 NA NA t3818.T000625 qPC–Ah05-2 5 Protein content Interval mapping TMV 2 × TMV 2-NLM RIL AhTE0278 NA 0 0 Ah05_115061124 0 0 107.18 3.2 – 4.1 10.3389/fpls.2021.668020 NA NA t3818.T000626 qPC–Ah05-3 5 Protein content Interval mapping TMV 2 × TMV 2-NLM RIL Ah05_115061124 NA 0 0 AhTE0470 0 0 109.2 3.1 – 5 10.3389/fpls.2021.668020 NA NA t3818.T000627 qPC–Ah10-1 5 Protein content Interval mapping TMV 2 × TMV 2-NLM RIL Ah10_49231630 NA 0 0 Ah10_5172296 0 0 73.24 4.2 – 5.9 10.3389/fpls.2021.668020 NA NA t3818.T000628 qPC–Ah16-1 5 Protein content Interval mapping TMV 2 × TMV 2-NLM RIL AhTE0242 NA 0 0 AhTE0060 0 0 3.01 7.6 – 15.3 10.3389/fpls.2021.668020 NA NA t3818.T000629 qPC–Ah16-2 5 Protein content Interval mapping TMV 2 × TMV 2-NLM RIL AhTE0060 NA 0 0 Ah16_77480103 0 0 12.1 6.9 – 13.5 10.3389/fpls.2021.668020 NA NA t3818.T000630 qPC–Ah16-3 5 Protein content Interval mapping TMV 2 × TMV 2-NLM RIL Ah16_45202683 NA 0 0 Ah16_24521300 0 0 86.5 – 86.5 5.7 – 7.3 10.3389/fpls.2021.668020 NA NA t3818.T000631 qOIL–Ah03-1 5 Oil content Interval mapping TMV 2 × TMV 2-NLM RIL Ah03_119813355 NA 0 0 Ah03_142793407 0 0 36.41 4.7 – 8.8 10.3389/fpls.2021.668020 NA NA t3818.T000632 qOIL–Ah03-2 5 Oil content Interval mapping TMV 2 × TMV 2-NLM RIL Ah03_142793407 NA 0 0 Ah03_142744367 0 0 37.2 – 37.2 6.3 – 9.4 10.3389/fpls.2021.668020 NA NA t3818.T000633 qOIL–Ah03-3 5 Oil content Interval mapping TMV 2 × TMV 2-NLM RIL Ah03_142744376 NA 0 0 AhTE1144 0 0 37.46 3.3 – 9.5 10.3389/fpls.2021.668020 NA NA t3818.T000634 qOIL–Ah03-4 5 Oil content Interval mapping TMV 2 × TMV 2-NLM RIL Ah03_143434398 NA 0 0 Ah03_22573013 0 0 38.62 3.4 – 10 10.3389/fpls.2021.668020 NA NA t3818.T000635 qOIL–Ah05-1 5 Oil content Interval mapping TMV 2 × TMV 2-NLM RIL Ah05_115061124 NA 0 0 AhTE0470 0 0 111.2 – 111.2 3.8 – 4.6 10.3389/fpls.2021.668020 NA NA t3818.T000636 qOIL–Ah05-2 5 Oil content Interval mapping TMV 2 × TMV 2-NLM RIL AhTE0470 NA 0 0 AhTE0275 0 0 116.3 3 – 3.5 10.3389/fpls.2021.668020 NA NA t3818.T000637 qOIL–Ah10-1 5 Oil content Interval mapping TMV 2 × TMV 2-NLM RIL Ah10_49312986 NA 0 0 AhTE0162 0 0 71.54 4.1 – 4.7 10.3389/fpls.2021.668020 NA NA t3818.T000638 qOIL–Ah11-1 5 Oil content Interval mapping TMV 2 × TMV 2-NLM RIL AhTE1016 NA 0 0 AhTE0113 0 0 89.7 – 89.7 5.4 – 8.5 10.3389/fpls.2021.668020 NA NA t3818.T000639 qOIL–Ah13-1 5 Oil content Interval mapping TMV 2 × TMV 2-NLM RIL Ah13_116034233 NA 0 0 Ah13_55555243 0 0 139.77 3.2 – 4.2 10.3389/fpls.2021.668020 NA NA t3818.T000640 qOIL–Ah20-1 5 Oil content Interval mapping TMV 2 × TMV 2-NLM RIL Ah20_6952858 NA 0 0 Ah20_46296032 0 0 11.04 3.3 – 5.1 10.3389/fpls.2021.668020 NA NA t3818.T000641 qOIL–Ah20-2 5 Oil content Interval mapping TMV 2 × TMV 2-NLM RIL Ah20_46296032 NA 0 0 Ah20_46627684 0 0 13.99 – 13.99 4.4 – 5.1 10.3389/fpls.2021.668020 NA NA t3818.T000642 qOLE–Ah10-1 5 Oleic acid content Interval mapping TMV 2 × TMV 2-NLM RIL Ah10_49231630 NA 0 0 Ah10_5172296 0 0 73.24 3.5 – 5.1 10.3389/fpls.2021.668020 NA NA t3818.T000643 qOLE–Ah16-1 5 Oleic acid content Interval mapping TMV 2 × TMV 2-NLM RIL AhTE0074 NA 0 0 Ah16_25236632 0 0 58.5 – 58.5 3.9 – 4 10.3389/fpls.2021.668020 NA NA t3818.T000644 qOLE–Ah19-1 5 Oleic acid content Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155127299 NA 0 0 Ah19_155127385 0 0 62.15 5.1 – 9.3 10.3389/fpls.2021.668020 NA NA t3818.T000645 qOLE–Ah19-2 5 Oleic acid content Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155127409 NA 0 0 Ah19_155127338 0 0 64.38 5.4 – 9.9 10.3389/fpls.2021.668020 NA NA t3818.T000646 qOLE–Ah19-3 5 Oleic acid content Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155127338 NA 0 0 Ah19_155127364 0 0 66.22 6.5 – 10.9 10.3389/fpls.2021.668020 NA NA t3818.T000647 qOLE–Ah19-4 5 Oleic acid content Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155127364 NA 0 0 Ah19_155179000 0 0 68.09 6.4 – 14.4 10.3389/fpls.2021.668020 NA NA t3818.T000648 qOLE–Ah19-5 5 Oleic acid content Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155179000 NA 0 0 Ah19_155135344 0 0 72.13 9.4 – 17.4 10.3389/fpls.2021.668020 NA NA t3818.T000649 qOLE–Ah19-6 5 Oleic acid content Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155135344 NA 0 0 Ah19_155135353 0 0 72.55 9.2 – 16.3 10.3389/fpls.2021.668020 NA NA t3818.T000650 qOLE–Ah19-7 5 Oleic acid content Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155135353 NA 0 0 Ah19_155179028 0 0 72.67 9.3 – 20 10.3389/fpls.2021.668020 NA NA t3818.T000651 qOLE–Ah19-8 5 Oleic acid content Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155172370 NA 0 0 Ah19_155172354 0 0 77.43 5.4 – 20.9 10.3389/fpls.2021.668020 NA NA t3818.T000652 qOLE–Ah19-9 5 Oleic acid content Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155172354 NA 0 0 Ah19_155165184 0 0 78.62 6.4 – 22.2 10.3389/fpls.2021.668020 NA NA t3818.T000653 qOLE–Ah19-10 5 Oleic acid content Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155165184 NA 0 0 Ah19_155179255 0 0 80.47 6.1 – 20.4 10.3389/fpls.2021.668020 NA NA t3818.T000654 qOLE–Ah19-11 5 Oleic acid content Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155179255 NA 0 0 Ah19_155179303 0 0 81.01 6.1 – 18.7 10.3389/fpls.2021.668020 NA NA t3818.T000655 qOLE–Ah19-12 5 Oleic acid content Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155179303 NA 0 0 Ah19_155165000 0 0 82.39 5.3 – 17 10.3389/fpls.2021.668020 NA NA t3818.T000656 qLIN–Ah19-1 5 Linoleic acid content Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155127299 NA 0 0 Ah19_155127385 0 0 62.15 7 – 9.9 10.3389/fpls.2021.668020 NA NA t3818.T000657 qLIN–Ah19-2 5 Linoleic acid content Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155127409 NA 0 0 Ah19_155127338 0 0 64.38 7.5 – 10.3 10.3389/fpls.2021.668020 NA NA t3818.T000658 qLIN–Ah19-3 5 Linoleic acid content Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155127338 NA 0 0 Ah19_155127364 0 0 66.22 8.6 – 11.6 10.3389/fpls.2021.668020 NA NA t3818.T000659 qLIN–Ah19-4 5 Linoleic acid content Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155127364 NA 0 0 Ah19_155179000 0 0 68.09 8.3 – 12.6 10.3389/fpls.2021.668020 NA NA t3818.T000660 qLIN–Ah19-5 5 Linoleic acid content Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155179000 NA 0 0 Ah19_155135344 0 0 72.13 11.7 – 17.6 10.3389/fpls.2021.668020 NA NA t3818.T000661 qLIN–Ah19-6 5 Linoleic acid content Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155135344 NA 0 0 Ah19_155135353 0 0 72.55 11.8 – 17.5 10.3389/fpls.2021.668020 NA NA t3818.T000662 qLIN–Ah19-7 5 Linoleic acid content Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155135353 NA 0 0 Ah19_155179028 0 0 73.67 11.2 – 16.6 10.3389/fpls.2021.668020 NA NA t3818.T000663 qLIN–Ah19-8 5 Linoleic acid content Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155179028 NA 0 0 Ah19_155172335 0 0 75.77 7.7 – 18.3 10.3389/fpls.2021.668020 NA NA t3818.T000664 qLIN–Ah19-9 5 Linoleic acid content Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155172335 NA 0 0 Ah19_155172370 0 0 77.31 6.3 – 18 10.3389/fpls.2021.668020 NA NA t3818.T000665 qLIN–Ah19-10 5 Linoleic acid content Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155172370 NA 0 0 Ah19_155172354 0 0 77.43 6.3 – 17.5 10.3389/fpls.2021.668020 NA NA t3818.T000666 qLIN–Ah19-11 5 Linoleic acid content Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155165184 NA 0 0 Ah19_155179255 0 0 79.47 7.1 – 16.6 10.3389/fpls.2021.668020 NA NA t3818.T000667 qLIN–Ah19-12 5 Linoleic acid content Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155179255 NA 0 0 Ah19_155179303 0 0 81.01 7.9 – 15.8 10.3389/fpls.2021.668020 NA NA t3818.T000668 qLIN–Ah19-13 5 Linoleic acid content Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155179303 NA 0 0 Ah19_155165000 0 0 83.39 7.8 – 14 10.3389/fpls.2021.668020 NA NA t3818.T000669 qO/L–Ah19-1 5 Oleic acid to linoleic acid ratio Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155127299 NA 0 0 Ah19_155127385 0 0 62.15 7.4 – 8.7 10.3389/fpls.2021.668020 NA NA t3818.T000670 qO/L–Ah19-2 5 Oleic acid to linoleic acid ratio Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155127409 NA 0 0 Ah19_155127338 0 0 64.38 8.2 – 10.5 10.3389/fpls.2021.668020 NA NA t3818.T000671 qO/L–Ah19-3 5 Oleic acid to linoleic acid ratio Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155127338 NA 0 0 Ah19_155127364 0 0 66.22 9.5 – 10.7 10.3389/fpls.2021.668020 NA NA t3818.T000672 qO/L–Ah19-4 5 Oleic acid to linoleic acid ratio Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155127364 NA 0 0 Ah19_155179000 0 0 68.09 9.2 – 12.4 10.3389/fpls.2021.668020 NA NA t3818.T000673 qO/L–Ah19-5 5 Oleic acid to linoleic acid ratio Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155179000 NA 0 0 Ah19_155135344 0 0 72.13 12.1 – 14.7 10.3389/fpls.2021.668020 NA NA t3818.T000674 qO/L–Ah19-6 5 Oleic acid to linoleic acid ratio Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155135344 NA 0 0 Ah19_155135353 0 0 72.55 12.3 – 14.6 10.3389/fpls.2021.668020 NA NA t3818.T000675 qO/L–Ah19-7 5 Oleic acid to linoleic acid ratio Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155135353 NA 0 0 Ah19_155179028 0 0 73.67 10.9 – 17 10.3389/fpls.2021.668020 NA NA t3818.T000676 qO/L–Ah19-8 5 Oleic acid to linoleic acid ratio Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155179028 NA 0 0 Ah19_155172335 0 0 75.77 7.1 – 19.2 10.3389/fpls.2021.668020 NA NA t3818.T000677 qO/L–Ah19-9 5 Oleic acid to linoleic acid ratio Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155172335 NA 0 0 Ah19_155172370 0 0 77.31 6.3 – 19 10.3389/fpls.2021.668020 NA NA t3818.T000678 qO/L–Ah19-10 5 Oleic acid to linoleic acid ratio Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155172354 NA 0 0 Ah19_155165184 0 0 78.62 6.5 – 19.5 10.3389/fpls.2021.668020 NA NA t3818.T000679 qO/L–Ah19-11 5 Oleic acid to linoleic acid ratio Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155165184 NA 0 0 Ah19_155179255 0 0 79.47 8.6 – 18.3 10.3389/fpls.2021.668020 NA NA t3818.T000680 qO/L–Ah19-12 5 Oleic acid to linoleic acid ratio Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155179255 NA 0 0 Ah19_155179303 0 0 81.01 8.2 – 17.2 10.3389/fpls.2021.668020 NA NA t3818.T000681 qO/L–Ah19-13 5 Oleic acid to linoleic acid ratio Interval mapping TMV 2 × TMV 2-NLM RIL Ah19_155179303 NA 0 0 Ah19_155165000 0 0 82.39 7.7 – 15.7 10.3389/fpls.2021.668020 NA NA t3818.T000682 1 Resistance to peanut smut QTL mapping JS17304-7-B × JS1806 F7:9 AX-147229403 NA A08 5 0 0 0 15.2 4.31 10.1186/s12870-021-03023-4 NA NA t3818.T000683 1 Resistance to peanut smut QTL mapping JS17304-7-B × JS1806 F7:9 AX-147212854 NA A02/B02 4 0 0 0 4 2.31 10.1186/s12870-021-03023-4 NA NA t3818.T000684 3 Pod length GWAS 250 accessions NA A02 85250071 0 0 0 6.44 10.3389/fpls.2021.637284 NA NA t3818.T000685 3 Pod length GWAS 250 accessions NA A02 86439145 0 0 0 9.94, 7.92, 8.65 10.3389/fpls.2021.637284 NA NA t3818.T000686 3 Pod length GWAS 250 accessions NA A02 86439292 0 0 0 7.27 10.3389/fpls.2021.637284 NA NA t3818.T000687 3 Pod length GWAS 250 accessions NA A06 108577126 0 0 0 8.73, 6.58, 11.7 10.3389/fpls.2021.637284 NA NA t3818.T000688 3 Pod length GWAS 250 accessions NA A06 108797911 0 0 0 8.48, 9.80 10.3389/fpls.2021.637284 NA NA t3818.T000689 3 Pod length GWAS 250 accessions NA A06 108613799 0 0 0 8.13, 10.78 10.3389/fpls.2021.637284 NA NA t3818.T000690 3 Pod length GWAS 250 accessions NA B04 14788349 0 0 0 8.07 10.3389/fpls.2021.637284 NA NA t3818.T000691 3 Pod length GWAS 250 accessions NA B05 28867279 0 0 0 6.33 10.3389/fpls.2021.637284 NA NA t3818.T000692 3 Pod length GWAS 250 accessions NA B06 126879939 0 0 0 6.47 10.3389/fpls.2021.637284 NA NA t3818.T000693 3 Pod length GWAS 250 accessions NA B06 127760084 0 0 0 7.50, 9.43 10.3389/fpls.2021.637284 NA NA t3818.T000694 3 Pod length GWAS 250 accessions NA B06 128026082 0 0 0 7.50, 9.43 10.3389/fpls.2021.637284 NA NA t3818.T000695 3 Pod length GWAS 250 accessions NA B06 129049126 0 0 0 10.94, 10.50, 6. 10.3389/fpls.2021.637284 NA NA t3818.T000696 3 Pod length GWAS 250 accessions NA B06 129334953 0 0 0 8.25, 10.54 10.3389/fpls.2021.637284 NA NA t3818.T000697 3 Pod length GWAS 250 accessions NA B06 129337040 0 0 0 8.25, 10.54 10.3389/fpls.2021.637284 NA NA t3818.T000698 3 Pod length GWAS 250 accessions NA B08 12828497 0 0 0 8.41, 7.32 10.3389/fpls.2021.637284 NA NA t3818.T000699 3 Pod width GWAS 250 accessions NA A02 86439145 0 0 0 7.26, 8.49, 6.56 10.3389/fpls.2021.637284 NA NA t3818.T000700 3 Pod width GWAS 250 accessions NA A04 11710914 0 0 0 6.83 10.3389/fpls.2021.637284 NA NA t3818.T000701 3 Pod width GWAS 250 accessions NA A06 108577126 0 0 0 10.07, 6.50, 9.3 10.3389/fpls.2021.637284 NA NA t3818.T000702 3 Pod width GWAS 250 accessions NA A06 108613799 0 0 0 8.89, 8.27 10.3389/fpls.2021.637284 NA NA t3818.T000703 3 Pod width GWAS 250 accessions NA B04 14788349 0 0 0 7.93, 7.10 10.3389/fpls.2021.637284 NA NA t3818.T000704 3 Pod width GWAS 250 accessions NA B06 43714566 0 0 0 6.69 10.3389/fpls.2021.637284 NA NA t3818.T000705 3 Pod width GWAS 250 accessions NA B10 43139630 0 0 0 6.68 10.3389/fpls.2021.637284 NA NA t3818.T000706 3 Seed length GWAS 250 accessions NA A02 86439145 0 0 0 7.48 10.3389/fpls.2021.637284 NA NA t3818.T000707 3 Seed length GWAS 250 accessions NA A06 108577126 0 0 0 10.12, 11.34 10.3389/fpls.2021.637284 NA NA t3818.T000708 3 Seed length GWAS 250 accessions NA A06 108613799 0 0 0 9.07, 10.17 10.3389/fpls.2021.637284 NA NA t3818.T000709 3 Seed length GWAS 250 accessions NA B04 14788349 0 0 0 7.27 10.3389/fpls.2021.637284 NA NA t3818.T000710 3 Seed length GWAS 250 accessions NA B04 21942665 0 0 0 7.06 10.3389/fpls.2021.637284 NA NA t3818.T000711 3 Seed length GWAS 250 accessions NA B05 28941971 0 0 0 6.83, 7.21 10.3389/fpls.2021.637284 NA NA t3818.T000712 3 Seed length GWAS 250 accessions NA B05 26948542 0 0 0 6.41 10.3389/fpls.2021.637284 NA NA t3818.T000713 3 Seed length GWAS 250 accessions NA B05 28867279 0 0 0 6.38 10.3389/fpls.2021.637284 NA NA t3818.T000714 3 Seed length GWAS 250 accessions NA B06 127760084 0 0 0 6.93 10.3389/fpls.2021.637284 NA NA t3818.T000715 3 Seed length GWAS 250 accessions NA B06 128026082 0 0 0 6.93 10.3389/fpls.2021.637284 NA NA t3818.T000716 3 Seed length GWAS 250 accessions NA B06 128423460 0 0 0 6.65, 6.53 10.3389/fpls.2021.637284 NA NA t3818.T000717 3 Seed length GWAS 250 accessions NA B06 129049126 0 0 0 6.57, 6.51 10.3389/fpls.2021.637284 NA NA t3818.T000718 3 Seed length GWAS 250 accessions NA B06 129334953 0 0 0 6.63 10.3389/fpls.2021.637284 NA NA t3818.T000719 3 Seed length GWAS 250 accessions NA B06 129337040 0 0 0 6.63 10.3389/fpls.2021.637284 NA NA t3818.T000720 3 Seed length GWAS 250 accessions NA B08 12828497 0 0 0 6.5 10.3389/fpls.2021.637284 NA NA t3818.T000721 3 Seed width GWAS 250 accessions NA A02 86439145 0 0 0 7.14, 6.49, 6.54 10.3389/fpls.2021.637284 NA NA t3818.T000722 3 Seed width GWAS 250 accessions NA A06 108577126 0 0 0 6.38, 8.23 10.3389/fpls.2021.637284 NA NA t3818.T000723 3 Seed width GWAS 250 accessions NA A06 108613799 0 0 0 7.26 10.3389/fpls.2021.637284 NA NA t3818.T000724 3 Seed width GWAS 250 accessions NA B04 14788349 0 0 0 8.09, 6.46, 10.3389/fpls.2021.637284 NA NA t3818.T000725 3 Seed width GWAS 250 accessions NA B04 21942665 0 0 0 6.52 10.3389/fpls.2021.637284 NA NA t3818.T000726 3 Seed width GWAS 250 accessions NA B06 128423460 0 0 0 7.06 10.3389/fpls.2021.637284 NA NA t3818.T000727 3 Hundred-pod weight GWAS 250 accessions NA A02 86439145 0 0 0 10.38, 7.56, 8.7 10.3389/fpls.2021.637284 NA NA t3818.T000728 3 Hundred-pod weight GWAS 250 accessions NA A03 35774235 0 0 0 8.83 10.3389/fpls.2021.637284 NA NA t3818.T000729 3 Hundred-pod weight GWAS 250 accessions NA A03 35774210 0 0 0 7.76 10.3389/fpls.2021.637284 NA NA t3818.T000730 3 Hundred-pod weight GWAS 250 accessions NA A03 35774246 0 0 0 8.22 10.3389/fpls.2021.637284 NA NA t3818.T000731 3 Hundred-pod weight GWAS 250 accessions NA A03 35774264 0 0 0 7.82 10.3389/fpls.2021.637284 NA NA t3818.T000732 3 Hundred-pod weight GWAS 250 accessions NA A03 35774391 0 0 0 8.83 10.3389/fpls.2021.637284 NA NA t3818.T000733 3 Hundred-pod weight GWAS 250 accessions NA A04 11710914 0 0 0 6.77 10.3389/fpls.2021.637284 NA NA t3818.T000734 3 Hundred-pod weight GWAS 250 accessions NA A04 25684033 0 0 0 54.99 10.3389/fpls.2021.637284 NA NA t3818.T000735 3 Hundred-pod weight GWAS 250 accessions NA A05 67802474 0 0 0 6.46 10.3389/fpls.2021.637284 NA NA t3818.T000736 3 Hundred-pod weight GWAS 250 accessions NA A05 67802578 0 0 0 6.46 10.3389/fpls.2021.637284 NA NA t3818.T000737 3 Hundred-pod weight GWAS 250 accessions NA A06 108577126 0 0 0 6.67, 10.21, 7.3 10.3389/fpls.2021.637284 NA NA t3818.T000738 3 Hundred-pod weight GWAS 250 accessions NA A06 108797911 0 0 0 7.16 10.3389/fpls.2021.637284 NA NA t3818.T000739 3 Hundred-pod weight GWAS 250 accessions NA A06 108613799 0 0 0 8.99 10.3389/fpls.2021.637284 NA NA t3818.T000740 3 Hundred-pod weight GWAS 250 accessions NA A10 83703447 0 0 0 11.23 10.3389/fpls.2021.637284 NA NA t3818.T000741 3 Hundred-pod weight GWAS 250 accessions NA B04 14788349 0 0 0 6.73, 8.21 10.3389/fpls.2021.637284 NA NA t3818.T000742 3 Hundred-pod weight GWAS 250 accessions NA B04 21942665 0 0 0 6.43 10.3389/fpls.2021.637284 NA NA t3818.T000743 3 Hundred-pod weight GWAS 250 accessions NA B06 129049126 0 0 0 8.21 10.3389/fpls.2021.637284 NA NA t3818.T000744 3 Hundred-pod weight GWAS 250 accessions NA B07 66366174 0 0 0 8.25 10.3389/fpls.2021.637284 NA NA t3818.T000745 3 Hundred-pod weight GWAS 250 accessions NA B09 11388639 0 0 0 6.5 10.3389/fpls.2021.637284 NA NA t3818.T000746 3 Hundred-pod weight GWAS 250 accessions NA B10 79678095 0 0 0 11.58 10.3389/fpls.2021.637284 NA NA t3818.T000747 3 Hundred-seed weight GWAS 250 accessions NA A02 86439145 0 0 0 6.97, 8.28, 7.04 10.3389/fpls.2021.637284 NA NA t3818.T000748 3 Hundred-seed weight GWAS 250 accessions NA A06 108577126 0 0 0 12.16, 6.98, 11. 10.3389/fpls.2021.637284 NA NA t3818.T000749 3 Hundred-seed weight GWAS 250 accessions NA A06 108797911 0 0 0 7.22, 8.19 10.3389/fpls.2021.637284 NA NA t3818.T000750 3 Hundred-seed weight GWAS 250 accessions NA A06 108613799 0 0 0 10.47, 9.56 10.3389/fpls.2021.637284 NA NA t3818.T000751 3 Hundred-seed weight GWAS 250 accessions NA B02 103571055 0 0 0 6.46 10.3389/fpls.2021.637284 NA NA t3818.T000752 3 Hundred-seed weight GWAS 250 accessions NA B02 103571097 0 0 0 6.46 10.3389/fpls.2021.637284 NA NA t3818.T000753 3 Hundred-seed weight GWAS 250 accessions NA B04 14788349 0 0 0 7.04, 7.72, 9.30 10.3389/fpls.2021.637284 NA NA t3818.T000754 3 Hundred-seed weight GWAS 250 accessions NA B04 21942665 0 0 0 7.43 10.3389/fpls.2021.637284 NA NA t3818.T000755 3 Hundred-seed weight GWAS 250 accessions NA B06 127760084 0 0 0 6.82 10.3389/fpls.2021.637284 NA NA t3818.T000756 3 Hundred-seed weight GWAS 250 accessions NA B06 128026082 0 0 0 6.82 10.3389/fpls.2021.637284 NA NA t3818.T000757 3 Hundred-seed weight GWAS 250 accessions NA B06 128423460 0 0 0 7.66, 6.91, 6.49 10.3389/fpls.2021.637284 NA NA t3818.T000758 3 Hundred-seed weight GWAS 250 accessions NA B06 129049126 0 0 0 7.38 10.3389/fpls.2021.637284 NA NA t3818.T000759 3 Hundred-seed weight GWAS 250 accessions NA B06 129334953 0 0 0 6.8 10.3389/fpls.2021.637284 NA NA t3818.T000760 3 Hundred-seed weight GWAS 250 accessions NA B06 129337040 0 0 0 6.8 10.3389/fpls.2021.637284 NA NA t3818.T000761 3 Hundred-seed weight GWAS 250 accessions NA B08 12829161 0 0 0 6.75 10.3389/fpls.2021.637284 NA NA t3818.T000762 3 Hundred-seed weight GWAS 250 accessions NA B08 12864670 0 0 0 6.49 10.3389/fpls.2021.637284 NA NA t3818.T000763 4 main stem height Fuchuanda × ICG 6376 TC1A2 NA 0 0 AHGS0153 0 0 52.61 3.46 10.3390/plants10061058 NA NA t3818.T000764 4 main stem height Fuchuanda × ICG 6377 AHGS1375 NA 0 0 PM377 0 0 63.21 4.34 10.3390/plants10061058 NA NA t3818.T000765 4 main stem height Fuchuanda × ICG 6378 GM2839 NA 0 0 EM87 0 0 43.01 4.63 10.3390/plants10061058 NA NA t3818.T000766 4 main stem height Fuchuanda × ICG 6379 AHGS0288 NA 0 0 pDGPseq3E10 0 0 26.01 2.74 10.3390/plants10061058 NA NA t3818.T000767 4 main stem height Fuchuanda × ICG 6380 AC2C8 NA 0 0 AHGS2027 0 0 3.01 3.1 10.3390/plants10061058 NA NA t3818.T000768 4 main stem height Fuchuanda × ICG 6381 TC1A2 NA 0 0 AHGS0153 0 0 52.71 5 10.3390/plants10061058 NA NA t3818.T000769 4 main stem height Fuchuanda × ICG 6382 AHGS1375 NA 0 0 PM377 0 0 62.31 2.64 10.3390/plants10061058 NA NA t3818.T000770 4 main stem height Fuchuanda × ICG 6383 AHGS1478 NA 0 0 GM2839 0 0 31.01 2.53 10.3390/plants10061058 NA NA t3818.T000771 4 main stem height Fuchuanda × ICG 6384 GM2839 NA 0 0 EM87 0 0 42.01 2.58 10.3390/plants10061058 NA NA t3818.T000772 4 plant height TAG 24 × GPBD 4 TC3A12 NA 0 0 GM1955 0 0 61.71 10.3390/plants10061058 NA NA t3818.T000773 4 plant height TAG 24 × GPBD 4 Seq7H06 NA 0 0 IPAHM176 0 0 0.01 - 1.91 7.12 10.3390/plants10061058 NA NA t3818.T000774 4 plant height TAG 24 × GPBD 4 GM1955 NA 0 0 GM1007 0 0 63.21 - 65.21 6.18 10.3390/plants10061058 NA NA t3818.T000775 4 plant height TAG 24 × GPBD 4 GM633 NA 0 0 PM179 0 0 70.41 - 71.51 10.3390/plants10061058 NA NA t3818.T000776 4 the height of main stem Zhonghua 10 × ICG12625 AHGS2058 NA 0 0 pPGSseq9H8 0 0 0 - 8.1 2.9 10.3390/plants10061058 NA NA t3818.T000777 4 the height of main stem Zhonghua 10 × ICG12625 AHGS2429 NA 0 0 POCR609 0 0 0 - 8.6 2.5 10.3390/plants10061058 NA NA t3818.T000778 4 the height of main stem Zhonghua 10 × ICG12625 GM2557 NA 0 0 GM2067 0 0 5.8 - 22.6 2.8 10.3390/plants10061058 NA NA t3818.T000779 4 the height of main stem Zheng 9001 × Zheng 8903 GC-107 NA 0 0 TC2B09 0 0 41.75 5.82 10.3390/plants10061058 NA NA t3818.T000780 4 the height of main stem Zheng 9001 × Zheng 8903 TC2B09 NA 0 0 ARS220 0 0 44.01 6.81 10.3390/plants10061058 NA NA t3818.T000781 4 the height of main stem Zheng 9001 × Zheng 8903 ARS220 NA 0 0 ARS141 0 0 48.1 6.16 10.3390/plants10061058 NA NA t3818.T000782 4 the height of main stem Zheng 9001 × Zheng 8903 ARS141 NA 0 0 GW-231 0 0 51.62 3.78 10.3390/plants10061058 NA NA t3818.T000783 4 main stem height Zheng 8903 × Yuhua 4 GC-38 NA 0 0 GC-92 0 0 4.01 5.25 10.3390/plants10061058 NA NA t3818.T000784 4 main stem height Zheng 8903 × Yuhua 4 ARS627 NA 0 0 ARS122 0 0 34.13 2.9 10.3390/plants10061058 NA NA t3818.T000785 4 main stem height 79266（P1) × D893（P2） AhTE1003 NA 0 0 GM2637 0 0 66 3.51 10.3390/plants10061058 NA NA t3818.T000786 4 main stem height 79266（P1） × D893（P2） ARS376 NA 0 0 Seq4G02 0 0 28 8.51 10.3390/plants10061058 NA NA t3818.T000787 4 main stem height 79266（P1） × D893（P2） AHGS2573 NA 0 0 GM1798 0 0 12 3.64 10.3390/plants10061058 NA NA t3818.T000788 4 main stem height 79266（P1） × D893（P2） AHGS1163 NA 0 0 AhTE0951 0 0 13 3 10.3390/plants10061058 NA NA t3818.T000789 4 main stem height 79266（P1） × D893（P2） GM623 NA 0 0 TC7C06 0 0 24 3.34 10.3390/plants10061058 NA NA t3818.T000790 4 main stem height 79266（P1） × D893（P2） TC5D06 NA 0 0 AHGS2635 0 0 9 5.61 10.3390/plants10061058 NA NA t3818.T000791 4 main stem height 79266（P1） × D893（P2） ARS376 NA 0 0 Seq4G02 0 0 29 5.79 10.3390/plants10061058 NA NA t3818.T000792 4 main stem height 79266（P1） × D893（P2） AhTE0882 NA 0 0 Seq17F06 0 0 38 5.22 10.3390/plants10061058 NA NA t3818.T000793 4 main stem height 79266（P1） × D893（P2） AHS1000 NA 0 0 AHGS1353 0 0 78 4.58 10.3390/plants10061058 NA NA t3818.T000794 4 main stem height 79266（P1） × D893（P2） ARS376 NA 0 0 Seq4G02 0 0 28 7.17 10.3390/plants10061058 NA NA t3818.T000795 4 main stem height 79266（P1） × D893（P2） GM1798 NA 0 0 AhTE0846 0 0 13 6.58 10.3390/plants10061058 NA NA t3818.T000796 4 main stem height 79266（P1） × D893（P2） AhTE0843 NA 0 0 AhTE0122 0 0 17 2.71 10.3390/plants10061058 NA NA t3818.T000797 4 main stem height 79266（P1） × D893（P2） AHGS2635 NA 0 0 AhTE0915 0 0 11 4.53 10.3390/plants10061058 NA NA t3818.T000798 4 main stem height 79266（P1） × D893（P2） ARS376 NA 0 0 Seq4G02 0 0 30 4.67 10.3390/plants10061058 NA NA t3818.T000799 4 main stem height 79266（P1） × D893（P2） AHGS2635 NA 0 0 AhTE0915 0 0 11 5.71 10.3390/plants10061058 NA NA t3818.T000800 4 main stem height 79266（P1） × D893（P2） ARS376 NA 0 0 Seq4G02 0 0 28 6.77 10.3390/plants10061058 NA NA t3818.T000801 4 main stem height 79266（P1） × D893（P2） AHGS2573 NA 0 0 GM1798 0 0 12 3.45 10.3390/plants10061058 NA NA t3818.T000802 4 main stem height Huayu28（P1） × P76（P2） Marker4138449 NA 0 0 Marker4133871 0 0 63.913 - 65.906 10.38 10.3390/plants10061058 NA NA t3818.T000803 4 main stem height Huayu28（P1） × P76（P2） Marker3807156 NA 0 0 Marker3692874 0 0 0 - 4.8 5 10.3390/plants10061058 NA NA t3818.T000804 4 main stem height Huayu28（P1） × P76（P2） Marker4642762 NA 0 0 Marker4762074 0 0 26.26 - 33.48 5.9 10.3390/plants10061058 NA NA t3818.T000805 4 main stem height Huayu28（P1） × P76（P2） Marker4676482 NA 0 0 Marker4855458 0 0 77.649 - 78.5 2.79 10.3390/plants10061058 NA NA t3818.T000806 4 plant height Yuanza9102 × Xuzhou68-4 AHGS2130 NA 0 0 AGGS2492 0 0 27.6 10.3390/plants10061058 NA NA t3818.T000807 4 plant height Yuanza9102 × Xuzhou68-4 pPGPSeq2F10 NA 0 0 AGGS1167 0 0 85.6 10.3390/plants10061058 NA NA t3818.T000808 4 plant height Yuanza9102 × Xuzhou68-4 AGGS1369 NA 0 0 GM1854 0 0 50.6 10.3390/plants10061058 NA NA t3818.T000809 4 plant height Yuanza9102 × Xuzhou68-4 Ai04B2241 NA 0 0 AGGS1601 0 0 44.7 10.3390/plants10061058 NA NA t3818.T000810 4 plant height 79266（P1） × D893（P2） ARS376 NA 0 0 SEQ4G02 0 0 28 - 30 6.58 10.3390/plants10061058 NA NA t3818.T000811 4 plant height 79266（P1） × D893（P2） AHGS2635 NA 0 0 AhTE0915 0 0 11 5.12 10.3390/plants10061058 NA NA t3818.T000812 4 plant height 79266（P1） × D893（P2） AHGS2573 NA 0 0 GM1798 0 0 12 3.55 10.3390/plants10061058 NA NA t3818.T000813 4 plant height 79266（P1） × D893（P2） AHGS1163 NA 0 0 AhTE0951 0 0 13 3 10.3390/plants10061058 NA NA t3818.T000814 4 plant height 79266（P1） × D893（P2） AhTE0882 NA 0 0 SEQ17F06 0 0 38 5.22 10.3390/plants10061058 NA NA t3818.T000815 4 plant height 79266（P1） × D893（P2） AhTE1003 NA 0 0 GM2637 0 0 66 3.51 10.3390/plants10061058 NA NA t3818.T000816 4 plant height 79266（P1） × D893（P2） AHS1000 NA 0 0 AHGS1353 0 0 78 4.58 10.3390/plants10061058 NA NA t3818.T000817 4 plant height 79266（P1） × D893（P2） GM623 NA 0 0 TC7C06 0 0 24 3.34 10.3390/plants10061058 NA NA t3818.T000818 4 plant height 79266（P1） × D893（P2） AhTE0843 NA 0 0 AhTE0122 0 0 17 2.71 10.3390/plants10061058 NA NA t3818.T000819 4 plant height 79266（P1） × D893（P2） TC5D06 NA 0 0 AHGS2635 0 0 9 5.61 10.3390/plants10061058 NA NA t3818.T000820 4 plant height 79266（P1） × D893（P2） GM1798 NA 0 0 AhTE0846 0 0 13 6.58 10.3390/plants10061058 NA NA t3818.T000821 4 plant height Zhonghua 10 × ICG12625 AGGS1547 NA 0 0 AGGS1206 0 0 61.9 4.9 10.3390/plants10061058 NA NA t3818.T000822 4 plant height Zhonghua 10 × ICG12625 AGGS2261-1 NA 0 0 AHGA170476 0 0 70.3 4.78 10.3390/plants10061058 NA NA t3818.T000823 4 plant height Yuanza 9102 × Xuzhou 68-10 (YX) and Xuhua13 × Zhonghua 6 (XZ) pPGPSeq2F10 NA 0 0 AGGS1187 0 0 85.54 10.3390/plants10061058 NA NA t3818.T000824 4 plant height Yuanza 9102 × Xuzhou 68-10 (YX) and Xuhua13 × Zhonghua 6 (XZ) AhTE0726 NA 0 0 AGGS0400 0 0 21.04 10.3390/plants10061058 NA NA t3818.T000825 4 plant height Yuanza 9102 × Xuzhou 68-10 (YX) and Xuhua13 × Zhonghua 6 (XZ) Ad09A6594 NA 0 0 GNB136 0 0 24.6 10.3390/plants10061058 NA NA t3818.T000826 4 plant height Yuanza 9102 × Xuzhou 68-10 (YX) and Xuhua13 × Zhonghua 6 (XZ) Ad09A7577 NA 0 0 AGGS1606 0 0 26.91 10.3390/plants10061058 NA NA t3818.T000827 4 plant height Yuanza 9102 × Xuzhou 68-10 (YX) and Xuhua13 × Zhonghua 6 (XZ) Ad09A3779 NA 0 0 GNB377 0 0 33.9 10.3390/plants10061058 NA NA t3818.T000828 4 plant height Yuanza 9102 × Xuzhou 68-10 (YX) and Xuhua13 × Zhonghua 6 (XZ) AHGS1276 NA 0 0 AGGS1369 0 0 42.84 10.3390/plants10061058 NA NA t3818.T000829 4 plant height Yuanza 9102 × Xuzhou 68-10 (YX) and Xuhua13 × Zhonghua 6 (XZ) AGGS2287 NA 0 0 AHGS1755 0 0 55.51 10.3390/plants10061058 NA NA t3818.T000830 4 plant height Yuanza 9102 × Xuzhou 68-10 (YX) and Xuhua13 × Zhonghua 6 (XZ) AHGS1945 NA 0 0 AGGS1686 0 0 21.53 10.3390/plants10061058 NA NA t3818.T000831 4 the first Branch Length Huayu28（P1） × P76（P2） Aradu.A01: 32289490-32289725 NA 0 0 Aradu.A01: 33852860-33852932 0 0 37.711 - 38.061 14.53 10.3390/plants10061058 NA NA t3818.T000832 4 the first Branch Length Huayu28（P1） × P76（P2） Aradu.A01: 93669777-93669934 NA 0 0 Aradu.A01: 94238761-94239005 0 0 63.913 - 65.906 12.68 10.3390/plants10061058 NA NA t3818.T000833 4 the first Branch Length Huayu28（P1） × P76（P2） Aradu.A10: 8519961-8520203 NA 0 0 Aradu.A10: 4081763-4082034 0 0 0 - 4.8 5.35 10.3390/plants10061058 NA NA t3818.T000834 4 the first Branch Length Huayu28（P1） × P76（P2） Araip.B03: 5924488-5924750 NA 0 0 Araip.B03: 14842593-14842787 0 0 26.26 - 33.48 5.9 10.3390/plants10061058 NA NA t3818.T000835 4 the first Branch Length Huayu28（P1） × P76（P2） Araip.B03: 27643916-27644229 NA 0 0 Araip.B03: 29331142-29331399 0 0 77.649 - 78.5 2.66 10.3390/plants10061058 NA NA t3818.T000836 4 lateral branch length 79266（P1） × D893（P13） ARS203 NA 0 0 AHS1413 0 0 3 - 5 7.15 10.3390/plants10061058 NA NA t3818.T000837 4 lateral branch length 79266（P1） × D893（P14） ARS376 NA 0 0 SEQ4G02 0 0 29 - 30 4.06 10.3390/plants10061058 NA NA t3818.T000838 4 lateral branch length 79266（P1） × D893（P15） AHGS1160 NA 0 0 AHS1741 0 0 80 6.03 10.3390/plants10061058 NA NA t3818.T000839 4 lateral branch length 79266（P1） × D893（P16） TC5D06 NA 0 0 AHGS2635 0 0 10 2.96 10.3390/plants10061058 NA NA t3818.T000840 4 lateral branch length 79266（P1） × D893（P17） AhM091 NA 0 0 AS1RN17A0 0 0 25 4.06 10.3390/plants10061058 NA NA t3818.T000841 4 lateral branch length 79266（P1） × D893（P18） ARS306 NA 0 0 AHGS0390 0 0 45 6.03 10.3390/plants10061058 NA NA t3818.T000842 4 lateral branch length 79266（P1） × D893（P19） AHGS1471 NA 0 0 GM1720 0 0 86 2.96 10.3390/plants10061058 NA NA t3818.T000843 4 lateral branch length 79266（P1） × D893（P20） GM623 NA 0 0 TC7C06 0 0 24 4.62 10.3390/plants10061058 NA NA t3818.T000844 4 lateral branch length 79266（P1） × D893（P21） AhTE0254 NA 0 0 AhTE0843 0 0 5 3.06 10.3390/plants10061058 NA NA t3818.T000845 4 lateral branch length 79266（P1） × D893（P22） AhTE0843 NA 0 0 AhTE0122 0 0 16 2.86 10.3390/plants10061058 NA NA t3818.T000846 4 lateral branch length 79266（P1） × D893（P23） AHGS2635 NA 0 0 AhTE0915 0 0 15 4.39 10.3390/plants10061058 NA NA t3818.T000847 4 lateral branch length 79266（P1） × D893（P24） GM849 NA 0 0 ARS376 0 0 24 6.85 10.3390/plants10061058 NA NA t3818.T000848 4 lateral branch length 79266（P1） × D893（P25） AHGS2781 NA 0 0 AhTE0211 0 0 0 4.08 10.3390/plants10061058 NA NA t3818.T000849 4 lateral branch length 79266（P1） × D893（P26） AhTE0633 NA 0 0 AhTE0143 0 0 80 3.59 10.3390/plants10061058 NA NA t3818.T000850 4 lateral branch length 79266（P1） × D893（P27） AHGS2573 NA 0 0 GM1798 0 0 12 4.7 10.3390/plants10061058 NA NA t3818.T000851 4 lateral branch length 79266（P1） × D893（P28） GM1798 NA 0 0 AhTE0846 0 0 13 3.33 10.3390/plants10061058 NA NA t3818.T000852 qMIA04a 3 Maturity index QTL mapping ‘Hanoch’ × ‘Harari’ RIL AX-176802283_A04 NA A04 118 0 AX-176815499_ A04 A04 126 0 28.5 5.33 10.1186/s12870-021-02951-5 NA NA t3818.T000853 qMIB06 3 Maturity index QTL mapping ‘Hanoch’ × ‘Harari’ RIL AX-147252043_B06 NA B06 11 0 AX-176807746_ B06 B06 17 0 50.6 5.28 10.1186/s12870-021-02951-5 NA NA t3818.T000854 qMIB03a 3 Maturity index QTL mapping ‘Hanoch’ × ‘Harari’ RIL AX-176807311_B03 NA B03 3 0 AX-176806413_ B03 B03 5 0 8.5 5 10.1186/s12870-021-02951-5 NA NA t3818.T000855 qMIA04b 3 Maturity index QTL mapping ‘Hanoch’ × ‘Harari’ RIL AX-176819644_A04 NA A04 119 0 AX-176815499_ A04 A04 126 0 4.3 6.45 10.1186/s12870-021-02951-5 NA NA t3818.T000856 qMIB05_2 3 Maturity index QTL mapping ‘Hanoch’ × ‘Harari’ RIL AX-147251167_B05 NA B05_ 2 157 0 AX-176821336_ B05 B05_ 2 159 0 21.6 5.5 10.1186/s12870-021-02951-5 NA NA t3818.T000857 qMIB03b 3 Maturity index QTL mapping ‘Hanoch’ × ‘Harari’ RIL AX-176807311_B03 NA B03 3 0 AX-176801237_ B03 B03 6 0 10.1 5.35 10.1186/s12870-021-02951-5 NA NA t3818.T000858 qPYB06.1 3 Pod yield QTL mapping ‘Hanoch’ × ‘Harari’ RIL AX-176806482_B06 NA B06 9 0 AX-176795044_ B06 B06 25 0 51.2 4.92 10.1186/s12870-021-02951-5 NA NA t3818.T000859 qPYB06.2 3 Pod yield QTL mapping ‘Hanoch’ × ‘Harari’ RIL AX-176817461_B06 NA B06 46 0 AX-176797523_ B06 B06 116 0 85.6 3.58 10.1186/s12870-021-02951-5 NA NA t3818.T000860 qPYB05_2 3 Pod yield QTL mapping ‘Hanoch’ × ‘Harari’ RIL AX-147251194_B05 NA B05_ 2 157 0 AX-147251268_ B05 B05_ 2 158 0 19.1 3.53 10.1186/s12870-021-02951-5 NA NA t3818.T000861 qHIB06a 3 Harvest index QTL mapping ‘Hanoch’ × ‘Harari’ RIL AX-176823538_B06 NA B06 8 0 AX-176793340_ B06 B06 117 0 51.2 11.77 10.1186/s12870-021-02951-5 NA NA t3818.T000862 qHIB05_2 3 Harvest index QTL mapping ‘Hanoch’ × ‘Harari’ RIL AX-147251167_B05 NA B05_ 2 157 0 AX-147223887_ B05 B05_ 2 158 0 21.6 5.61 10.1186/s12870-021-02951-5 NA NA t3818.T000863 qHIA06.2 3 Harvest index QTL mapping ‘Hanoch’ × ‘Harari’ RIL AX-176793198_A06 NA A06 7 0 AX-177642314_ A06 A06 17 0 180.5 5.39 10.1186/s12870-021-02951-5 NA NA t3818.T000864 qHIA06.1 3 Harvest index QTL mapping ‘Hanoch’ × ‘Harari’ RIL AX-176799874_A06 NA A06 54 0 AX-176800771_ A06 A06 99 0 75.9 5.14 10.1186/s12870-021-02951-5 NA NA t3818.T000865 qHIB03 3 Harvest index QTL mapping ‘Hanoch’ × ‘Harari’ RIL AX-176807311_B03 NA B03 3 0 AX-176800560_ B03 B03 5 0 5.54 5.32 10.1186/s12870-021-02951-5 NA NA t3818.T000866 qHIB06b 3 Harvest index QTL mapping ‘Hanoch’ × ‘Harari’ RIL AX-176819980_B06 NA B06 9 0 AX-176822996_ B06 B06 22 0 50 4.71 10.1186/s12870-021-02951-5 NA NA t3818.T000867 qHIA07 3 Harvest index QTL mapping ‘Hanoch’ × ‘Harari’ RIL AX-177640658_A07 NA A07 73 0 AX-176822344_ A07 A07 74 0 150.6 3.79 10.1186/s12870-021-02951-5 NA NA t3818.T000868 qHIB01 3 Harvest index QTL mapping ‘Hanoch’ × ‘Harari’ RIL AX-176797129_B01 NA B01 141 0 AX-176811427_ B01 B01 145 0 63.7 3.03 10.1186/s12870-021-02951-5 NA NA t3818.T000869 q50PWA06 3 50 pod weight QTL mapping ‘Hanoch’ × ‘Harari’ RIL AX-176804928_A06 NA A06 10 0 AX-147225817_ A06 A06 97 0 99.1 6.39 10.1186/s12870-021-02951-5 NA NA t3818.T000870 5 Relative water content stage 1 GWAS 124 genotypes AX-147248780 NA B04 130738535 0 0 0 7.59557043750642 10.3390/genes15070868 NA NA t3818.T000871 5 Relative water content stage 1 GWAS 124 genotypes AX-147219057 NA A04 2934143 0 0 0 4.80459904238079 10.3390/genes15070868 NA NA t3818.T000872 5 Relative water content stage 1 GWAS 124 genotypes AX-177643583 NA B08 128130441 0 0 0 8.36532638113124 10.3390/genes15070868 NA NA t3818.T000873 5 Relative water content stage 1 GWAS 124 genotypes AX-147219130 NA A04 3582051 0 0 0 2.2382164013876e 10.3390/genes15070868 NA NA t3818.T000874 5 Relative water content stage 2 GWAS 124 genotypes AX-177638932 NA A07 66962106 0 0 0 1.06994226557717 10.3390/genes15070868 NA NA t3818.T000875 5 Relative water content stage 2 GWAS 124 genotypes AX-147245281 NA B03 120244146 0 0 0 6.75228689985248 10.3390/genes15070868 NA NA t3818.T000876 5 Specific leaf area stage 1 GWAS 124 genotypes AX-177639510 NA B10 109491122 0 0 0 4.08694718841976 10.3390/genes15070868 NA NA t3818.T000877 5 Dry weight GWAS 124 genotypes AX-176792556 NA A08 1053912 0 0 0 4.91559449260733 10.3390/genes15070868 NA NA t3818.T000878 5 Dry weight GWAS 124 genotypes AX-176815659 NA A07 605413 0 0 0 1.21454464410439 10.3390/genes15070868 NA NA t3818.T000879 5 Dry weight GWAS 124 genotypes AX-177642049 NA B09 120728154 0 0 0 9.82507579799012 10.3390/genes15070868 NA NA t3818.T000880 5 Dry weight GWAS 124 genotypes AX-176809834 NA B06 2362556 0 0 0 1.02468155417002 10.3390/genes15070868 NA NA t3818.T000881 5 Dry weight GWAS 124 genotypes AX-176819260 NA B10 66768283 0 0 0 2.42196220193847 10.3390/genes15070868 NA NA t3818.T000882 5 Dry weight GWAS 124 genotypes AX-176806959 NA A05 1298032 0 0 0 2.86059221436583 10.3390/genes15070868 NA NA t3818.T000883 5 Pod count GWAS 124 genotypes AX-176792912 NA B05 131612302 0 0 0 1.09563683280739 10.3390/genes15070868 NA NA t3818.T000884 5 Pod count GWAS 124 genotypes AX-176823743 NA A03 112316851 0 0 0 2.04791675614166 10.3390/genes15070868 NA NA t3818.T000885 5 Pod count GWAS 124 genotypes AX-176821819 NA B04 33641851 0 0 0 2.07410546686836 10.3390/genes15070868 NA NA t3818.T000886 5 Pod count GWAS 124 genotypes AX-176803155 NA A05 35863460 0 0 0 4.54250196715433 10.3390/genes15070868 NA NA t3818.T000887 1 Drought rating GWAS 124 genotypes AX-147224451 NA A06 4994882 0 0 0 4.82629518565738 10.3390/genes15070868 NA NA t3818.T000888 3 Hundred-seed weight GWAS 199 accessions 138643609 NA 16 138532301 0 16 138756092 0 7.63, 7.59 10.1186/s12870-024-04937-5 NA NA t3818.T000889 3 Total number of 500 grams of pods GWAS 199 accessions 138643609 NA 16 138532301 0 16 138756092 0 7.9, 8.95 10.1186/s12870-024-04937-5 NA NA t3818.T000890 3 Total number of 250 grams of seeds GWAS 199 accessions 138643609 NA 16 138532301 0 16 138756092 0 7.47, 8.36 10.1186/s12870-024-04937-5 NA NA t3818.T000891 3 Pod width GWAS 199 accessions 138643609 NA 16 138532301 0 16 138756092 0 7.99, 8.84 10.1186/s12870-024-04937-5 NA NA t3818.T000892 3 Hundred-pod weight GWAS 199 accessions 139632313 NA 16 139532424 0 16 139731914 0 7.55 10.1186/s12870-024-04937-5 NA NA t3818.T000893 3 Hundred-seed weight GWAS 199 accessions 139632313 NA 16 139532424 0 16 139731914 0 7.47, 7.30 10.1186/s12870-024-04937-5 NA NA t3818.T000894 3 Total number of 500 grams of pods GWAS 199 accessions 139632313 NA 16 139532424 0 16 139731914 0 7.65, 7.23 10.1186/s12870-024-04937-5 NA NA t3818.T000895 3 Total number of 250 grams of seeds GWAS 199 accessions 139632313 NA 16 139532424 0 16 139731914 0 8.08 10.1186/s12870-024-04937-5 NA NA t3818.T000896 3 Pod width GWAS 199 accessions 139632313 NA 16 139532424 0 16 139731914 0 7.37, 7.35, 8.77 10.1186/s12870-024-04937-5 NA NA t3818.T000897 3 Hundred-pod weight GWAS 199 accessions 142656321 NA 16 142542242 0 16 142737244 0 7.12, 8.24 10.1186/s12870-024-04937-5 NA NA t3818.T000898 3 Total number of 500 grams of pods GWAS 199 accessions 142656321 NA 16 142542242 0 16 142737244 0 7.58, 7.55, 9.06 10.1186/s12870-024-04937-5 NA NA t3818.T000899 3 Total number of 250 grams of seeds GWAS 199 accessions 142656321 NA 16 142542242 0 16 142737244 0 7.29 10.1186/s12870-024-04937-5 NA NA t3818.T000900 3 Pod width GWAS 199 accessions 142656321 NA 16 142542242 0 16 142737244 0 7.16, 8.35 10.1186/s12870-024-04937-5 NA NA t3818.T000901 3 Hundred-pod weight GWAS 199 accessions 142692237 NA 16 142578547 0 16 142795108 0 8.53, 10.74 10.1186/s12870-024-04937-5 NA NA t3818.T000902 3 Hundred-seed weight GWAS 199 accessions 142692237 NA 16 142578547 0 16 142795108 0 7.7, 8.45 10.1186/s12870-024-04937-5 NA NA t3818.T000903 3 Total number of 500 grams of pods GWAS 199 accessions 142692237 NA 16 142578547 0 16 142795108 0 9.14, 8.52 10.1186/s12870-024-04937-5 NA NA t3818.T000904 3 Total number of 250 grams of seeds GWAS 199 accessions 142692237 NA 16 142578547 0 16 142795108 0 7.39, 10.48 10.1186/s12870-024-04937-5 NA NA t3818.T000905 3 Pod length GWAS 199 accessions 142692237 NA 16 142578547 0 16 142795108 0 7.7 10.1186/s12870-024-04937-5 NA NA t3818.T000906 3 Pod width GWAS 199 accessions 142692237 NA 16 142578547 0 16 142795108 0 10.57, 9.73, 9.3 10.1186/s12870-024-04937-5 NA NA t3818.T000907 3 Hundred-pod weight GWAS 199 accessions 142867474 NA 16 142775097 0 16 142972005 0 8.14 10.1186/s12870-024-04937-5 NA NA t3818.T000908 3 Total number of 500 grams of pods GWAS 199 accessions 142867474 NA 16 142775097 0 16 142972005 0 7.53 10.1186/s12870-024-04937-5 NA NA t3818.T000909 3 Pod length GWAS 199 accessions 142867474 NA 16 142775097 0 16 142972005 0 9.02, 7.11, 8.09 10.1186/s12870-024-04937-5 NA NA t3818.T000910 3 Pod width GWAS 199 accessions 142867474 NA 16 142775097 0 16 142972005 0 8.06, 7.17, 7.28 10.1186/s12870-024-04937-5 NA NA t3818.T000911 5 Protein content GWAS 199 accessions 38378278 NA 8 3827767 0 8 38491489 0 5.06 10.1186/s12870-024-04937-5 NA NA t3818.T000912 5 Oil content GWAS 199 accessions 38378278 NA 8 3827767 0 8 38491489 0 5.91 10.1186/s12870-024-04937-5 NA NA t3818.T000913 5 Protein content GWAS 199 accessions 49538603 NA 8 49428114 0 8 49646678 0 6.94, 5.3 10.1186/s12870-024-04937-5 NA NA t3818.T000914 5 Oil content GWAS 199 accessions 49538603 NA 8 49428114 0 8 49646678 0 7.06 10.1186/s12870-024-04937-5 NA NA t3818.T000915 qPODYLD18E1 3 Pod yield Composite interval mapping Valencia-C × JUG-03 RIL S18_51822496-S18_134813874 NA 0 0 0 0 28.17 4.88 10.3390/genes15020140 NA NA t3818.T000916 qPODYLD12.2E2 3 Pod yield Composite interval mapping Valencia-C × JUG-03 RIL S12_93246314-S12_100066236 NA 0 0 0 0 99.71 4.6 10.3390/genes15020140 NA NA t3818.T000917 qPODYLD12.3E2 3 Pod yield Composite interval mapping Valencia-C × JUG-03 RIL S12_110782372-S12_112245066 NA 0 0 0 0 106.01 4.78 10.3390/genes15020140 NA NA t3818.T000918 qHAULMYLD18E1 3 Haulm yield Composite interval mapping Valencia-C × JUG-03 RIL S18_51822496-S18_134813874 NA 0 0 0 0 28.61 4.34 10.3390/genes15020140 NA NA t3818.T000919 qHAULMYLD6E1 3 Haulm yield Composite interval mapping Valencia-C × JUG-03 RIL S6_1562649-S6_1630272 NA 0 0 0 0 29.16 3.64 10.3390/genes15020140 NA NA t3818.T000920 qHSW12E1 3 100-seed weight Composite interval mapping Valencia-C × JUG-03 RIL S12_42838843-S12_73270208 NA 0 0 0 0 57.21 4.06 10.3390/genes15020140 NA NA t3818.T000921 qHSW16E1 3 100-seed weight Composite interval mapping Valencia-C × JUG-03 RIL S16_2332048-S16_8231918 NA 0 0 0 0 120.57 6.65 10.3390/genes15020140 NA NA t3818.T000922 qHSW16E2 3 100-seed weight Composite interval mapping Valencia-C × JUG-03 RIL S16_2332048-S16_8231918 NA 0 0 0 0 120.55 6.11 10.3390/genes15020140 NA NA t3818.T000923 qSP12E1 3 Shelling percentage Composite interval mapping Valencia-C × JUG-03 RIL S12_42838843-S12_73270208 NA 0 0 0 0 57.23 4.36 10.3390/genes15020140 NA NA t3818.T000924 qSP12E2 3 Shelling percentage Composite interval mapping Valencia-C × JUG-03 RIL S12_42838843-S12_73270208 NA 0 0 0 0 57.21 4.43 10.3390/genes15020140 NA NA t3818.T000925 qSCMR17E2 3 SPAD chlorophyll meter reading Composite interval mapping Valencia-C × JUG-03 RIL S17_32203546-S17_66864943 NA 0 0 0 0 22.21 4.27 10.3390/genes15020140 NA NA t3818.T000926 qOIL12E1 5 Oil content Composite interval mapping Valencia-C × JUG-03 RIL S12_42838843-S12_73270208 NA 0 0 0 0 57.21 3.05 10.3390/genes15020140 NA NA t3818.T000927 qOIL12E2 5 Oil content Composite interval mapping Valencia-C × JUG-03 RIL S12_42838843-S12_73270208 NA 0 0 0 0 57.23 3.02 10.3390/genes15020140 NA NA t3818.T000928 qPROTEIN12E2 5 Protein content Composite interval mapping Valencia-C × JUG-03 RIL S12_42838843-S12_73270208 NA 0 0 0 0 57.21 3.15 10.3390/genes15020140 NA NA t3818.T000929 qLINOLEIC12E2 5 Linoleic acid Composite interval mapping Valencia-C × JUG-03 RIL S12_36421620-S12_118023921 NA 0 0 0 0 64.11 3.43 10.3390/genes15020140 NA NA t3818.T000930 qOLEIC17E1 5 Oleic acid Composite interval mapping Valencia-C × JUG-03 RIL S17_32203546-S17_66864943 NA 0 0 0 0 22.21 5.76 10.3390/genes15020140 NA NA t3818.T000931 qOLEIC17E2 5 Oleic acid Composite interval mapping Valencia-C × JUG-03 RIL S17_32203546-S17_66864943 NA 0 0 0 0 22.21 6.14 10.3390/genes15020140 NA NA t3818.T000932 qFA_02 5 C20:0 Inclusive composite interval map JH5 × KX01-6 RIL Chr02.92004332 NA 0 0 Chr02.92097568 0 0 44 4.63 10.3390/genes15010075 NA NA t3818.T000933 qFA_04 5 C18:0, C20:0 Inclusive composite interval map JH5 × KX01-6 RIL Chr04.7737038 NA 0 0 Chr04.10252892 0 0 7–8 4.48–5.90 10.3390/genes15010075 NA NA t3818.T000934 qFA_05 5 C20:0 Inclusive composite interval map JH5 × KX01-6 RIL Chr05.37478237 NA 0 0 Chr05.88563212 0 0 75–82 6.13–31.03 10.3390/genes15010075 NA NA t3818.T000935 qFA_07 5 C22:0 Inclusive composite interval map JH5 × KX01-6 RIL Chr07.4150878 NA 0 0 Chr07.3251821 0 0 83 4.71 10.3390/genes15010075 NA NA t3818.T000936 qFA_08_1 5 C18:0, C20:0,C20:1 Inclusive composite interval map JH5 × KX01-6 RIL Chr08.42575311 NA 0 0 Chr08.46776535 0 0 39–55 6.33–15.58 10.3390/genes15010075 NA NA t3818.T000937 qFA_08_2 5 C22:0 Inclusive composite interval map JH5 × KX01-6 RIL Chr08.15237857 NA 0 0 Chr08.14658317 0 0 100 5.48 10.3390/genes15010075 NA NA t3818.T000938 qFA_09_1 5 C18:0 Inclusive composite interval map JH5 × KX01-6 RIL Chr09.111222696 NA 0 0 Chr09.111444555 0 0 28 9.35 10.3390/genes15010075 NA NA t3818.T000939 qFA_09_2 5 C16:0, C18:0,C18:1, C18:2, C20:0, C20:1 Inclusive composite interval map JH5 × KX01-6 RIL Chr09.113696781 NA 0 0 Chr09.114431570 0 0 40–41 5.12–32.93 10.3390/genes15010075 NA NA t3818.T000940 qFA_10 5 C18:2 Inclusive composite interval map JH5 × KX01-6 RIL Chr10.5820536 NA 0 0 Chr10.6895328 0 0 19 4.23 10.3390/genes15010075 NA NA t3818.T000941 qFA_11 5 C22:0 Inclusive composite interval map JH5 × KX01-6 RIL Chr11.135590338 NA 0 0 Chr11.134662327 0 0 51 5.35 10.3390/genes15010075 NA NA t3818.T000942 qFA_12 5 C20:0, C22:0 Inclusive composite interval map JH5 × KX01-6 RIL Chr12.17574379 NA 0 0 Chr12.3375707 0 0 49–50 5.59–9.80 10.3390/genes15010075 NA NA t3818.T000943 qFA_14 5 C20:0 Inclusive composite interval map JH5 × KX01-6 RIL Chr14.139524574 NA 0 0 Chr14.137319755 0 0 110 5.14–18.38 10.3390/genes15010075 NA NA t3818.T000944 qFA_16 5 C20:0 Inclusive composite interval map JH5 × KX01-6 RIL Chr16.147123562 NA 0 0 Chr16.146960299 0 0 89 6.18 10.3390/genes15010075 NA NA t3818.T000945 qFA_18 5 C18:0 Inclusive composite interval map JH5 × KX01-6 RIL Chr18.114667904 NA 0 0 Chr18.115066398 0 0 112 5.58 10.3390/genes15010075 NA NA t3818.T000946 qFA_19_1 5 C18:2 Inclusive composite interval map JH5 × KX01-6 RIL Chr19.8567191 NA 0 0 Chr19.11838675 0 0 7 4.12 10.3390/genes15010075 NA NA t3818.T000947 qFA_19_2 5 C16:0, C18:1,C18:2 Inclusive composite interval map JH5 × KX01-6 RIL Chr19.12239093 NA 0 0 Chr19.12852116 0 0 11–20 4.02–10.14 10.3390/genes15010075 NA NA t3818.T000948 qFA_19_3 5 C16:0, C18:1, C18:2, C20:0, C20:1 Inclusive composite interval map JH5 × KX01-6 RIL Chr19.138748208 NA 0 0 Chr19.156112831 0 0 39–46 5.99–37.56 10.3390/genes15010075 NA NA t3818.T000949 4 Pod shell thickness BSA-seq YY18 × WH8 F2 NA Arahy.03 127500001 0 129500000 0 0 10.1186/s12864-024-10005-x NA NA t3818.T000950 4 Pod shell thickness BSA-seq YY18 × WH8 F2 NA Arahy.08 22920001 0 41090000 0 0 10.1186/s12864-024-10005-x NA NA t3818.T000951 4 Pod shell thickness BSA-seq YY18 × WH8 F2 NA Arahy.13 125790001 0 132490000 0 0 10.1186/s12864-024-10005-x NA NA t3818.T000952 4 Pod shell thickness BSA-seq YY18 × WH8 F2 NA Arahy.18 3490001 0 16360000 0 0 10.1186/s12864-024-10005-x NA NA t3818.T000953 4 Pod area Multiple QTL mapping YY18 × WH8 F2 Tif2_A08_31713024 NA 0 0 Tif2_A08_32441294 0 0 17.1-19.3 10.1186/s12864-024-10005-x NA NA t3818.T000954 4 Pod area Multiple QTL mapping YY18 × WH8 F2 Tif2_A18_7198124 NA 0 0 Tif2_A18_7347232 0 0 11.5-11.8 10.1186/s12864-024-10005-x NA NA t3818.T000955 4 Pod area Multiple QTL mapping YY18 × WH8 F2 Tif2_A13_126828166 NA 0 0 Tif2_A13_127788471 0 0 5.1 10.1186/s12864-024-10005-x NA NA t3818.T000956 4 Pod perimeter Multiple QTL mapping YY18 × WH8 F2 Tif2_A08_31024672 NA 0 0 Tif2_A08_31713024 0 0 3.9-4.1 10.1186/s12864-024-10005-x NA NA t3818.T000957 4 Pod width Multiple QTL mapping YY18 × WH8 F2 Tif2_A08_31713024 NA 0 0 Tif2_A08_32441294 0 0 14.6-15.7 10.1186/s12864-024-10005-x NA NA t3818.T000958 4 Pod width Multiple QTL mapping YY18 × WH8 F2 Tif2_A18_7198124 NA 0 0 Tif2_A18_7347232 0 0 10.0-10.2 10.1186/s12864-024-10005-x NA NA t3818.T000959 4 Pod length Multiple QTL mapping YY18 × WH8 F2 Tif2_A08_31024672 NA 0 0 Tif2_A08_31713024 0 0 14.0-15.1 10.1186/s12864-024-10005-x NA NA t3818.T000960 4 Pod length Multiple QTL mapping YY18 × WH8 F2 Tif2_A18_7198124 NA 0 0 Tif2_A18_7347232 0 0 9.6-10.1 10.1186/s12864-024-10005-x NA NA t3818.T000961 4 Pod shell thickness Fine mapping YY18 × WH8 F2 NA Arahy.08 31024672 0 31713024 0 0 1.6 27.5–28.7 10.1186/s12864-024-10005-x NA NA t3818.T000962 4 Pod shell thickness Fine mapping YY18 × WH8 F2 NA Arahy.13 126828166 0 127788471 0 0 0.5 5.7–5.9 10.1186/s12864-024-10005-x NA NA t3818.T000963 4 Pod shell thickness Fine mapping YY18 × WH8 F2 NA Arahy.18 7198124 0 7347232 0 0 2.83 13.5–13.6 10.1186/s12864-024-10005-x NA NA t3818.T000964 qHPWA04.1 3 Hundred-pod weight ICIM-ADD JH5 × M130 RIL SMK547-SMK549 NA 0 0 0 0 2.21 3.42 10.3390/genes14091792 NA NA t3818.T000965 qHPWA08.1 3 Hundred-pod weight ICIM-ADD JH5 × M130 RIL AhTE0658-TC22C01 NA 0 0 0 0 6.26 6.69 10.3390/genes14091792 NA NA t3818.T000966 qHPWA08.2 3 Hundred-pod weight ICIM-ADD JH5 × M130 RIL AhTE0658-TC22C01 NA 0 0 0 0 6.97 3.38 10.3390/genes14091792 NA NA t3818.T000967 3 Hundred-pod weight ICIM-ADD JH5 × M130 RIL AhTE0658-TC22C01 NA 0 0 0 0 7.69 3.6 10.3390/genes14091792 NA NA t3818.T000968 qHPWA08.3 3 Hundred-pod weight ICIM-ADD JH5 × M130 RIL AhTE0658-TC22C01 NA 0 0 0 0 7.69 7.31 10.3390/genes14091792 NA NA t3818.T000969 3 Hundred-pod weight ICIM-ADD JH5 × M130 RIL AhTE0658-TC22C01 NA 0 0 0 0 7.69 5.44 10.3390/genes14091792 NA NA t3818.T000970 qHPWA08.4 3 Hundred-pod weight ICIM-ADD JH5 × M130 RIL AhTE0658-TC22C01 NA 0 0 0 0 8.4 6.07 10.3390/genes14091792 NA NA t3818.T000971 qHPWA08.5 3 Hundred-pod weight ICIM-ADD JH5 × M130 RIL me3em14-196-Ah4-4 NA 0 0 0 0 21.2 4.32 10.3390/genes14091792 NA NA t3818.T000972 qHPWA08.6 3 Hundred-pod weight ICIM-ADD JH5 × M130 RIL Ah4-4-Ah2TC09B08 NA 0 0 0 0 25 4.92 10.3390/genes14091792 NA NA t3818.T000973 qHPWA08.7 3 Hundred-pod weight ICIM-ADD JH5 × M130 RIL Ah4-4-Ah2TC09B08 NA 0 0 0 0 26 3.6 10.3390/genes14091792 NA NA t3818.T000974 qHPWA08.8 3 Hundred-pod weight ICIM-ADD JH5 × M130 RIL Ah4-4-Ah2TC09B08 NA 0 0 0 0 27.0027.00 4.60, 3.293.29 10.3390/genes14091792 NA NA t3818.T000975 qHPWB04.1 3 Hundred-pod weight ICIM-ADD JH5 × M130 RIL SMK1996-SMK1995 NA 0 0 0 0 1.11 3.2 10.3390/genes14091792 NA NA t3818.T000976 qHPWB05.1 3 Hundred-pod weight ICIM-ADD JH5 × M130 RIL SMK2087-SMK2088 NA 0 0 0 0 3.01 2.6 10.3390/genes14091792 NA NA t3818.T000977 qHPWB05.2 3 Hundred-pod weight ICIM-ADD JH5 × M130 RIL SMK2085-SMK2084 NA 0 0 0 0 16.01 3.19 10.3390/genes14091792 NA NA t3818.T000978 qHPWB06.1 3 Hundred-pod weight ICIM-ADD JH5 × M130 RIL SMK2106-SMK2107 NA 0 0 0 0 34.51 2.84, 4.054.05 10.3390/genes14091792 NA NA t3818.T000979 3 Hundred-pod weight ICIM-ADD JH5 × M130 RIL AHGS1286-Ah3TC20B05 NA 0 0 0 0 0 5.47 10.3390/genes14091792 NA NA t3818.T000980 qHPWB08.1 3 Hundred-pod weight ICIM-ADD JH5 × M130 RIL AHGS1286-Ah3TC20B05 NA 0 0 0 0 0 3.22 10.3390/genes14091792 NA NA t3818.T000981 3 Hundred-pod weight ICIM-ADD JH5 × M130 RIL AHGS1286-Ah3TC20B05 NA 0 0 0 0 0 3.51 10.3390/genes14091792 NA NA t3818.T000982 3 Hundred-pod weight ICIM-ADD JH5 × M130 RIL AHGS1286-Ah3TC20B05 NA 0 0 0 0 1 3.97 10.3390/genes14091792 NA NA t3818.T000983 qHPWB08.2 3 Hundred-pod weight ICIM-ADD JH5 × M130 RIL AHGS1286-Ah3TC20B05 NA 0 0 0 0 1 5.9 10.3390/genes14091792 NA NA t3818.T000984 3 Hundred-pod weight ICIM-ADD JH5 × M130 RIL AHGS1286-Ah3TC20B05 NA 0 0 0 0 1 4.79 10.3390/genes14091792 NA NA t3818.T000985 qHPWB08.3 3 Hundred-pod weight ICIM-ADD JH5 × M130 RIL SMK2658-SMK2393 NA 0 0 0 0 17.21 2.65 10.3390/genes14091792 NA NA t3818.T000986 qHPWB08.4 3 Hundred-pod weight ICIM-ADD JH5 × M130 RIL SMK2406-SMK2423 NA 0 0 0 0 24.51 2.57 10.3390/genes14091792 NA NA t3818.T000987 qHPWB08.5 3 Hundred-pod weight ICIM-ADD JH5 × M130 RIL SMK2628-SMK2626 NA 0 0 0 0 36.81 3.65 10.3390/genes14091792 NA NA t3818.T000988 qHSWA03.1 3 Hundred-seed weight ICIM-ADD JH5 × M130 RIL SMK539-SMK540 NA 0 0 0 0 106.81 4.04, 2.672.67 10.3390/genes14091792 NA NA t3818.T000989 qHSWA04.1 3 Hundred-seed weight ICIM-ADD JH5 × M130 RIL SMK547-SMK549 NA 0 0 0 0 1.21 2.75 10.3390/genes14091792 NA NA t3818.T000990 qHSWA08.1 3 Hundred-seed weight ICIM-ADD JH5 × M130 RIL AhTE0658-TC22C01 NA 0 0 0 0 6.23 5.65 10.3390/genes14091792 NA NA t3818.T000991 qHSWA08.2 3 Hundred-seed weight ICIM-ADD JH5 × M130 RIL AhTE0658-TC22C01 NA 0 0 0 0 6.97 3.75 10.3390/genes14091792 NA NA t3818.T000992 qHSWA08.3 3 Hundred-seed weight ICIM-ADD JH5 × M130 RIL AhTE0658-TC22C01 NA 0 0 0 0 9.12 5 10.3390/genes14091792 NA NA t3818.T000993 qHSWA08.4 3 Hundred-seed weight ICIM-ADD JH5 × M130 RIL Ah1TC06H03-AhTE0477 NA 0 0 0 0 19 3.91 10.3390/genes14091792 NA NA t3818.T000994 qHSWA08.5 3 Hundred-seed weight ICIM-ADD JH5 × M130 RIL Ah4-4-Ah2TC09B08Ah4-4-Ah2TC09B08 NA 0 0 0 0 26 6.66, 5.745.74 10.3390/genes14091792 NA NA t3818.T000995 3 Hundred-seed weight ICIM-ADD JH5 × M130 RIL Ah4-4-Ah2TC09B08 NA 0 0 0 0 26 3.49 10.3390/genes14091792 NA NA t3818.T000996 qHSWA08.6 3 Hundred-seed weight ICIM-ADD JH5 × M130 RIL Ah4-4-Ah2TC09B08 NA 0 0 0 0 27 3.49 10.3390/genes14091792 NA NA t3818.T000997 3 Hundred-seed weight ICIM-ADD JH5 × M130 RIL Ah4-4-Ah2TC09B08 NA 0 0 0 0 27 4 10.3390/genes14091792 NA NA t3818.T000998 qHSWB04.1 3 Hundred-seed weight ICIM-ADD JH5 × M130 RIL SMK1978-SMK1848 NA 0 0 0 0 11.61 4.39 10.3390/genes14091792 NA NA t3818.T000999 qHSWB05.1 3 Hundred-seed weight ICIM-ADD JH5 × M130 RIL SMK2063-SMK2062 NA 0 0 0 0 29.91 2.55 10.3390/genes14091792 NA NA t3818.T001000 qHSWB06.1 3 Hundred-seed weight ICIM-ADD JH5 × M130 RIL SMK2106-SMK2107 NA 0 0 0 0 34.51 3.89 10.3390/genes14091792 NA NA t3818.T001001 qHSWB08.1 3 Hundred-seed weight ICIM-ADD JH5 × M130 RIL AHGS1286-Ah3TC20B08 NA 0 0 0 0 0 4.73 10.3390/genes14091792 NA NA t3818.T001002 qHSWB08.2 3 Hundred-seed weight ICIM-ADD JH5 × M130 RIL AHGS1286-Ah3TC20B08 NA 0 0 0 0 1 3.86 10.3390/genes14091792 NA NA t3818.T001003 qAFTsA07.1 1 Aflatoxin resistance Composite interval mapping Xuhua13 × Zhonghua 6 RIL TIF.17:118381-PA11:2103429 NA A07 0 0 A07 2 0 0.01-31.79 6.94 10.1016/j.jare.2023.09.014 NA NA t3818.T001004 1 Aflatoxin resistance Composite interval mapping Xuhua13 × Zhonghua 6 RIL TIF.17:118381-PA11:2103429 NA A07 0 0 A07 2 0 0.01-31.79 5.26 10.1016/j.jare.2023.09.014 NA NA t3818.T001005 1 Aflatoxin resistance Composite interval mapping Xuhua13 × Zhonghua 6 RIL TIF.17:118381-PA11:2103429 NA A07 0 0 A07 2 0 0.01-31.79 3.98 10.1016/j.jare.2023.09.014 NA NA t3818.T001006 qAFTsA07.2 1 Aflatoxin resistance Composite interval mapping Xuhua13 × Zhonghua 6 RIL TIF.07:58988620-TIF.07:62491911 NA A07 59 0 A07 62 0 59.11-62.40 3.21 10.1016/j.jare.2023.09.014 NA NA t3818.T001007 qAFTsA02 1 Aflatoxin resistance Composite interval mapping Xuhua13 × Zhonghua 6 RIL TIF.02:1722668-TIF.02:2765688 NA A02 2 0 A02 3 0 8.63-10.73 3.81 10.1016/j.jare.2023.09.014 NA NA t3818.T001008 qAFTsB07 1 Aflatoxin resistance Composite interval mapping Xuhua13 × Zhonghua 6 RIL TIF.17:121175430-TIF.02:12914393 NA B07 121 0 B07 129 0 48.97-63.16 4.42 10.1016/j.jare.2023.09.014 NA NA t3818.T001009 1 Aflatoxin resistance Composite interval mapping Xuhua13 × Zhonghua 6 RIL TIF.17:127579080-TIF.02:12847775 NA B07 128 0 B07 128 0 56.69-58.59 3.46 10.1016/j.jare.2023.09.014 NA NA t3818.T001010 qHKWA07, qKAA07 3 Hundred kernel weight, kernel area Inclusive composite interval map Yuanza9102 × wt09-0023 RIL A07.128473 - A07.283082 NA 0 0 0 0 1.25 to 1.55 17.38 to 41.22 10.1186/s12864-023-09568-y NA NA t3818.T001011 qKWA07 3 Kernel width Inclusive composite interval map Yuanza9102 × wt09-0023 RIL A07.283082 - A07.671643 NA 0 0 0 0 2.65 to 5.25 27.23 to 47.42 10.1186/s12864-023-09568-y NA NA t3818.T001012 qKLA07 3 Kernel length Inclusive composite interval map Yuanza9102 × wt09-0023 RIL A07.128473 - A07.283082 NA 0 0 0 0 1.25 to 1.55 12.36 to 16.10 10.1186/s12864-023-09568-y NA NA t3818.T001013 FQSPW-1 3 Single pod weight Inclusive composite interval map 79266 × D8933 F2 S7-19~S7-22 NA 0 0 0 0 0–0.5 24.99 10.1111/pbi.14076 NA NA t3818.T001014 FQSPW-2 3 Single pod weight Inclusive composite interval map 79266 × D8933 F2 S7-111~S7-126 NA 0 0 0 0 2.5–3.5 4.97 10.1111/pbi.14076 NA NA t3818.T001015 FQPL 3 Pod length Inclusive composite interval map 79266 × D8933 F2 S7-19~S7-22 NA 0 0 0 0 0–0.5 6.84 10.1111/pbi.14076 NA NA t3818.T001016 FQPW 3 Pod width Inclusive composite interval map 79266 × D8933 F2 S7-77~S7-90 NA 0 0 0 0 0–1.5 42.79 10.1111/pbi.14076 NA NA t3818.T001017 FQPST 3 Pod shell thickness Inclusive composite interval map 79266 × D8933 F2 S7-111~S7-126 NA 0 0 0 0 2.5–4.5 6.52 10.1111/pbi.14076 NA NA t3818.T001018 RQSPW-1 3 Single pod weight Inclusive composite interval map 79266 × D8933 RIL S7-38~S7-90 NA 0 0 0 0 1.5–3.5 3.83 10.1111/pbi.14076 NA NA t3818.T001019 RQSPW-2 3 Single pod weight Inclusive composite interval map 79266 × D8933 RIL S7-90~S7-126 NA 0 0 0 0 3.5–4.5 10.34 10.1111/pbi.14076 NA NA t3818.T001020 3 Single pod weight Inclusive composite interval map 79266 × D8933 RIL S7-90~S7-126 NA 0 0 0 0 3.5–4.5 7.28 10.1111/pbi.14076 NA NA t3818.T001021 3 Single pod weight Inclusive composite interval map 79266 × D8933 RIL S7-90~S7-126 NA 0 0 0 0 3.5–4.5 19.38 10.1111/pbi.14076 NA NA t3818.T001022 3 Single pod weight Inclusive composite interval map 79266 × D8933 RIL S7-90~S7-126 NA 0 0 0 0 3.5–4.5 14.58 10.1111/pbi.14076 NA NA t3818.T001023 3 Single pod weight Inclusive composite interval map 79266 × D8933 RIL S7-90~S7-126 NA 0 0 0 0 3.5–4.5 15.08 10.1111/pbi.14076 NA NA t3818.T001024 3 Single pod weight Inclusive composite interval map 79266 × D8933 RIL S7-90~S7-126 NA 0 0 0 0 3.5–4.5 47.79 10.1111/pbi.14076 NA NA t3818.T001025 RQSPW-3 3 Single pod weight Inclusive composite interval map 79266 × D8933 RIL S7-130~S7-132 NA 0 0 0 0 5.5–7 33.83 10.1111/pbi.14076 NA NA t3818.T001026 RQPL-1 3 Pod length Inclusive composite interval map 79266 × D8933 RIL S7-38~S7-90 NA 0 0 0 0 1.5–3.5 2.62 10.1111/pbi.14076 NA NA t3818.T001027 RQPL-2 3 Pod length Inclusive composite interval map 79266 × D8933 RIL S7-90~S7-126 NA 0 0 0 0 3.5–4.5 3.63 10.1111/pbi.14076 NA NA t3818.T001028 3 Pod length Inclusive composite interval map 79266 × D8933 RIL S7-90~S7-126 NA 0 0 0 0 3.5–4.5 8.64 10.1111/pbi.14076 NA NA t3818.T001029 3 Pod length Inclusive composite interval map 79266 × D8933 RIL S7-90~S7-126 NA 0 0 0 0 3.5–4.5 6.27 10.1111/pbi.14076 NA NA t3818.T001030 3 Pod length Inclusive composite interval map 79266 × D8933 RIL S7-90~S7-126 NA 0 0 0 0 3.5–4.5 5.02 10.1111/pbi.14076 NA NA t3818.T001031 3 Pod length Inclusive composite interval map 79266 × D8933 RIL S7-90~S7-126 NA 0 0 0 0 3.5–4.5 7.2 10.1111/pbi.14076 NA NA t3818.T001032 RQPW-1 3 Pod width Inclusive composite interval map 79266 × D8933 RIL S7-38~S7-90 NA 0 0 0 0 1.5–3.5 7.31 10.1111/pbi.14076 NA NA t3818.T001033 RQPW-2 3 Pod width Inclusive composite interval map 79266 × D8933 RIL S7-90~S7-126 NA 0 0 0 0 3.5–4.5 11.32 10.1111/pbi.14076 NA NA t3818.T001034 3 Pod width Inclusive composite interval map 79266 × D8933 RIL S7-90~S7-126 NA 0 0 0 0 3.5–4.5 9.94 10.1111/pbi.14076 NA NA t3818.T001035 3 Pod width Inclusive composite interval map 79266 × D8933 RIL S7-90~S7-126 NA 0 0 0 0 3.5–4.5 18.41 10.1111/pbi.14076 NA NA t3818.T001036 3 Pod width Inclusive composite interval map 79266 × D8933 RIL S7-90~S7-126 NA 0 0 0 0 3.5–4.5 13.03 10.1111/pbi.14076 NA NA t3818.T001037 3 Pod width Inclusive composite interval map 79266 × D8933 RIL S7-90~S7-126 NA 0 0 0 0 3.5–4.5 17.55 10.1111/pbi.14076 NA NA t3818.T001038 3 Pod width Inclusive composite interval map 79266 × D8933 RIL S7-90~S7-126 NA 0 0 0 0 3.5–4.5 15.75 10.1111/pbi.14076 NA NA t3818.T001039 RQPST-1 3 Pod shell thickness Inclusive composite interval map 79266 × D8933 RIL S7-19~S7-38 NA 0 0 0 0 0–1.5 7.41 10.1111/pbi.14076 NA NA t3818.T001040 RQPST-2 3 Pod shell thickness Inclusive composite interval map 79266 × D8933 RIL S7-38~S7-90 NA 0 0 0 0 1.5–3.5 7.45 10.1111/pbi.14076 NA NA t3818.T001041 RQPST-3 3 Pod shell thickness Inclusive composite interval map 79266 × D8933 RIL S7-38~S7-90 NA 0 0 0 0 1.5–3.5 6.16 10.1111/pbi.14076 NA NA t3818.T001042 3 Pod shell thickness Inclusive composite interval map 79266 × D8933 RIL S7-90~S7-126 NA 0 0 0 0 3.5–4.5 8.42 10.1111/pbi.14076 NA NA t3818.T001043 3 Pod shell thickness Inclusive composite interval map 79266 × D8933 RIL S7-90~S7-126 NA 0 0 0 0 3.5–4.5 9.01 10.1111/pbi.14076 NA NA t3818.T001044 3 Pod shell thickness Inclusive composite interval map 79266 × D8933 RIL S7-90~S7-126 NA 0 0 0 0 3.5–4.5 10.56 10.1111/pbi.14076 NA NA t3818.T001045 3 Pod shell thickness Inclusive composite interval map 79266 × D8933 RIL S7-90~S7-126 NA 0 0 0 0 3.5–4.5 10.74 10.1111/pbi.14076 NA NA t3818.T001046 qRGRB09 5 Relative germination rate Complex interval mapping DF12 × Huayu 44 RIL C19P153976706 NA B09 4 0 C19P157324174 0 0 49.7 - 61.75 10 10.3389/fpls.2023.1153293 NA NA t3818.T001047 qRGRB09 5 Relative germination rate Complex interval mapping DF12 × Huayu 44 RIL C19P154454417 NA B09 4 0 C19P157324174 0 0 54.23 - 61.75 5.76 10.3389/fpls.2023.1153293 NA NA t3818.T001048 qRGRB09 5 Relative germination rate Complex interval mapping DF12 × Huayu 44 RIL C19P154855110 NA B09 756 0 C19P155555990 0 0 54.77 - 56.37 4.99 10.3389/fpls.2023.1153293 NA NA t3818.T001049 qRGRB09 5 Relative germination rate Complex interval mapping DF12 × Huayu 44 RIL C19P154187296 NA B09 4 0 C19P157324174 0 0 50.78 - 61.75 7.57 10.3389/fpls.2023.1153293 NA NA t3818.T001050 qRGRB09 5 Relative germination rate Complex interval mapping DF12 × Huayu 44 RIL C19P152409354 NA B09 6 0 C19P157324174 0 0 46.74 - 61.75 11.96 10.3389/fpls.2023.1153293 NA NA t3818.T001051 qRGRB09 5 Relative germination rate Complex interval mapping DF12 × Huayu 44 RIL C19P153065061 NA B09 5 0 C19P157324174 0 0 47.01 - 61.75 13.44 10.3389/fpls.2023.1153293 NA NA t3818.T001052 5 Relative germination rate Fine mapping DF12 × Huayu 44 RIL G22096 NA 0 0 G22097 0 0 14.5 - 16.5 6.0965 10.3389/fpls.2023.1153293 NA NA t3818.T001053 1 Late leaf spot Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC3F2 NA A02 86 0 A02 92 0 86.67 16.9 10.3389/fpls.2023.1139361 NA NA t3818.T001054 1 Late leaf spot Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC3F2 NA A04 0 0 A04 7 0 6.68 5.4 10.3389/fpls.2023.1139361 NA NA t3818.T001055 1 Late leaf spot Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC3F2 NA A06 93 0 A06 110 0 109.39 12.8 10.3389/fpls.2023.1139361 NA NA t3818.T001056 1 Late leaf spot Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC3F2 NA A10 8 0 A10 85 0 57.14 13 10.3389/fpls.2023.1139361 NA NA t3818.T001057 1 Late leaf spot Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC3F2 NA B01 0 0 B01 2 0 1.43 7.7 10.3389/fpls.2023.1139361 NA NA t3818.T001058 1 Late leaf spot Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC3F2 NA B06 130 0 B06 134 0 129.58 14.9 10.3389/fpls.2023.1139361 NA NA t3818.T001059 1 Late leaf spot Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC3F4 NA A02 86 0 A02 92 0 91.64 15.3 10.3389/fpls.2023.1139361 NA NA t3818.T001060 1 Late leaf spot Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC3F4 NA A04 0 0 A04 7 0 0.11 19.4 10.3389/fpls.2023.1139361 NA NA t3818.T001061 1 Late leaf spot Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC3F4 NA A06 93 0 A06 110 0 107.41 11.8 10.3389/fpls.2023.1139361 NA NA t3818.T001062 1 Late leaf spot Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC3F4 NA A10 8 0 A10 85 0 12.93 13 10.3389/fpls.2023.1139361 NA NA t3818.T001063 1 Late leaf spot Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC3F4 NA B01 0 0 B01 2 0 1.13 11.2 10.3389/fpls.2023.1139361 NA NA t3818.T001064 1 Late leaf spot Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC3F4 NA B06 130 0 B06 134 0 133.74 22.8 10.3389/fpls.2023.1139361 NA NA t3818.T001065 1 Late leaf spot Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC3F5 NA A02 86 0 A02 92 0 92.08 15.8 10.3389/fpls.2023.1139361 NA NA t3818.T001066 1 Late leaf spot Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC3F5 NA A04 0 0 A04 7 0 3.02 9.4 10.3389/fpls.2023.1139361 NA NA t3818.T001067 1 Late leaf spot Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC3F5 NA A06 93 0 A06 110 0 104.39 5.5 10.3389/fpls.2023.1139361 NA NA t3818.T001068 1 Late leaf spot Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC3F5 NA A10 8 0 A10 85 0 84.67 6 10.3389/fpls.2023.1139361 NA NA t3818.T001069 1 Late leaf spot Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC3F5 NA B01 0 0 B01 2 0 1.43 9.6 10.3389/fpls.2023.1139361 NA NA t3818.T001070 1 Late leaf spot Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC3F5 NA B06 130 0 B06 134 0 129.58 13.9 10.3389/fpls.2023.1139361 NA NA t3818.T001071 1 Late leaf spot Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC4F2 NA A04 0 0 A04 7 0 3.71 4.3 10.3389/fpls.2023.1139361 NA NA t3818.T001072 1 Late leaf spot Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC4F2 NA A06 93 0 A06 110 0 93.86 3.2 10.3389/fpls.2023.1139361 NA NA t3818.T001073 1 Late leaf spot Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC4F2 NA A10 8 0 A10 85 0 7.98 4.4 10.3389/fpls.2023.1139361 NA NA t3818.T001074 1 Late leaf spot Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC4F2 NA B01 0 0 B01 2 0 2.1 3.7 10.3389/fpls.2023.1139361 NA NA t3818.T001075 1 Late leaf spot Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC4F2 NA B06 130 0 B06 134 0 133.74 6.6 10.3389/fpls.2023.1139361 NA NA t3818.T001076 5 Rust Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC3F2 NA B07 114 0 B07 116 0 114.49 7 10.3389/fpls.2023.1139361 NA NA t3818.T001077 5 Rust Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC3F2 NA B08 125 0 0 0 125.47 6.9 10.3389/fpls.2023.1139361 NA NA t3818.T001078 5 Rust Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC3F4 NA B07 114 0 B07 116 0 114.49 4.3 10.3389/fpls.2023.1139361 NA NA t3818.T001079 5 Rust Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC3F4 NA B08 125 0 0 0 31.74 3.6 10.3389/fpls.2023.1139361 NA NA t3818.T001080 5 Rust Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC3F5 NA B07 114 0 B07 116 0 115.51 3.7 10.3389/fpls.2023.1139361 NA NA t3818.T001081 5 Rust Nonparametric interval mapping ‘IAC OL 4’ × MagSten BC3F5 NA B08 125 0 0 0 31.74 2.8 10.3389/fpls.2023.1139361 NA NA t3818.T001082 qGHA15 4 Growth habit ICIM Yuanza9102 × wt09-0023 RIL A15.156842544–A15.157017503 NA 0 0 0 0 203.1–204.2 27.76–61.28 10.1007/s00122-023-04327-9 NA NA t3818.T001083 qGHA06 4 Growth habit ICIM Yuanza9102 × wt09-0023 RIL A06.111949361–A06.111980823 NA 0 0 0 0 139.1–139.3 29.24–40.20 10.1007/s00122-023-04327-9 NA NA t3818.T001084 qIOPTA15 4 Index of plant type ICIM Yuanza9102 × wt09-0023 RIL A15.157017503–A15.157139324 NA 0 0 0 0 204.5 38.21–39.23 10.1007/s00122-023-04327-9 NA NA t3818.T001085 qIOPTA06 4 Index of plant type ICIM Yuanza9102 × wt09-0023 RIL A06.111949361–A06.111980823 NA 0 0 0 0 138.9–139.3 30.45–30.69 10.1007/s00122-023-04327-9 NA NA t3818.T001086 AhVt1 4 Testa color BSA-seq FH8 × Wc F2 NA 8 6 0 19.17 Mb 0 0 10.3389/fpls.2023.1145098 NA NA t3818.T001087 AhVt1 4 Testa color Genetic mapping FH8 × Wc F2 PC6 NA 0 0 PB7 0 0 10.3389/fpls.2023.1145098 NA NA t3818.T001088 Aradu.X4EEU 4 Total branch number Association analysis 146 accessions NA A03 122181829 0 0 0 2.69250396208679 10.3389/fpls.2023.1102174 NA NA t3818.T001089 Aradu.X4EEU 4 Total branch number r1 Association analysis 146 accessions NA A03 122181829 0 0 0 0.82935697716389 10.3389/fpls.2023.1102174 NA NA t3818.T001090 Aradu.X4EEU 4 Total branch number r2 Association analysis 146 accessions NA A03 122181829 0 0 0 1.56976364658849 10.3389/fpls.2023.1102174 NA NA t3818.T001091 Aradu.X4EEU 4 Total branch number r3 Association analysis 146 accessions NA A03 122181829 0 0 0 3.73438041684611 10.3389/fpls.2023.1102174 NA NA t3818.T001092 Aradu.X4EEU 4 Total branch number r4 Association analysis 146 accessions NA A03 122181829 0 0 0 1.8569851997459 10.3389/fpls.2023.1102174 NA NA t3818.T001093 Aradu.X4EEU 4 Total branch number r5 Association analysis 146 accessions NA A03 122181829 0 0 0 1.02673356389147 10.3389/fpls.2023.1102174 NA NA t3818.T001094 Aradu.X4EEU 4 Pod length Association analysis 146 accessions NA A03 122181829 0 0 0 1.52578373592374 10.3389/fpls.2023.1102174 NA NA t3818.T001095 Aradu.X4EEU 4 Pod length r1 Association analysis 146 accessions NA A03 122181829 0 0 0 1.14849704722946 10.3389/fpls.2023.1102174 NA NA t3818.T001096 Aradu.X4EEU 4 Pod length r2 Association analysis 146 accessions NA A03 122181829 0 0 0 0.55854053108220 10.3389/fpls.2023.1102174 NA NA t3818.T001097 Aradu.X4EEU 4 Pod length r3 Association analysis 146 accessions NA A03 122181829 0 0 0 1.00572685102683 10.3389/fpls.2023.1102174 NA NA t3818.T001098 Aradu.X4EEU 4 Pod length r4 Association analysis 146 accessions NA A03 122181829 0 0 0 2.25336580106242 10.3389/fpls.2023.1102174 NA NA t3818.T001099 Aradu.X4EEU 4 Pod length r5 Association analysis 146 accessions NA A03 122181829 0 0 0 1.44563199900991 10.3389/fpls.2023.1102174 NA NA t3818.T001100 Aradu.X4EEU 4 Root-shoot ratio E Association analysis 146 accessions NA A03 122181829 0 0 0 1.0168700752653 10.3389/fpls.2023.1102174 NA NA t3818.T001101 Aradu.X4EEU 4 Root-shoot ratio PEG r2 Association analysis 146 accessions NA A03 122181829 0 0 0 1.89279003035213 10.3389/fpls.2023.1102174 NA NA t3818.T001102 Aradu.X4EEU 4 Root-shoot ratio w Association analysis 146 accessions NA A03 122181829 0 0 0 0.44484506893681 10.3389/fpls.2023.1102174 NA NA t3818.T001103 Aradu.X4EEU 4 Root-shoot ratio w PEG Association analysis 146 accessions NA A03 122181829 0 0 0 0.64988771990163 10.3389/fpls.2023.1102174 NA NA t3818.T001104 Aradu.X4EEU 4 Root-shoot ratio w r2 Association analysis 146 accessions NA A03 122181829 0 0 0 2.28066871301627 10.3389/fpls.2023.1102174 NA NA t3818.T001105 1 Resistance to R. solanacearum QTL-seq Yueyou 92 × Xinhuixiaoli RIL NA 12 2 0 0 0 < 4.73×10−7 10.3389/fpls.2022.1048168 NA NA t3818.T001106 5 Palmitic acid (C16:0) GWAS 250 germplasm NA A01 74335532 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001107 5 Palmitic acid (C16:0) GWAS 250 germplasm NA A01 74335590 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001108 5 Palmitic acid (C16:0) GWAS 250 germplasm NA A01 74335594 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001109 5 Palmitic acid (C16:0) GWAS 250 germplasm NA A08 13807926 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001110 5 Palmitic acid (C16:0) GWAS 250 germplasm NA B07 12735110 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001111 5 Stearic acid (C18:0) GWAS 250 germplasm NA A04 122159879 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001112 5 Stearic acid (C18:0) GWAS 250 germplasm NA A06 89152383 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001113 5 Stearic acid (C18:0) GWAS 250 germplasm NA A07 15649477 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001114 5 Stearic acid (C18:0) GWAS 250 germplasm NA A08 13449194 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001115 5 Stearic acid (C18:0) GWAS 250 germplasm NA A08 13449174 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001116 5 Stearic acid (C18:0) GWAS 250 germplasm NA A08 13449218 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001117 5 Stearic acid (C18:0) GWAS 250 germplasm NA A08 13449254 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001118 5 Stearic acid (C18:0) GWAS 250 germplasm NA A09 79674307 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001119 5 Stearic acid (C18:0) GWAS 250 germplasm NA B04 6864416 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001120 5 Stearic acid (C18:0) GWAS 250 germplasm NA B06 101056070 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001121 5 Stearic acid (C18:0) GWAS 250 germplasm NA B06 122677790 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001122 5 Stearic acid (C18:0) GWAS 250 germplasm NA B06 125302832 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001123 5 Stearic acid (C18:0) GWAS 250 germplasm NA B06 101056207 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001124 5 Stearic acid (C18:0) GWAS 250 germplasm NA B06 125245720 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001125 5 Stearic acid (C18:0) GWAS 250 germplasm NA B08 99316583 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001126 5 Stearic acid (C18:0) GWAS 250 germplasm NA B08 100701563 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001127 5 Stearic acid (C18:0) GWAS 250 germplasm NA B08 99316608 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001128 5 Stearic acid (C18:0) GWAS 250 germplasm NA B09 39964570 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001129 5 Stearic acid (C18:0) GWAS 250 germplasm NA B09 39964423 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001130 5 Stearic acid (C18:0) GWAS 250 germplasm NA B09 39964474 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001131 5 Stearic acid (C18:0) GWAS 250 germplasm NA B09 39964477 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001132 5 Oleic acid (C18:1) GWAS 250 germplasm NA A04 82199580 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001133 5 Oleic acid (C18:1) GWAS 250 germplasm NA A07 45014402 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001134 5 Oleic acid (C18:1) GWAS 250 germplasm NA A08 13807926 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001135 5 Oleic acid (C18:1) GWAS 250 germplasm NA A09 114106219 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001136 5 Oleic acid (C18:1) GWAS 250 germplasm NA A09 115528661 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001137 5 Oleic acid (C18:1) GWAS 250 germplasm NA A09 115782994 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001138 5 Oleic acid (C18:1) GWAS 250 germplasm NA A09 115784659 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001139 5 Oleic acid (C18:1) GWAS 250 germplasm NA A09 115958917 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001140 5 Oleic acid (C18:1) GWAS 250 germplasm NA B06 120868183 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001141 5 Oleic acid (C18:1) GWAS 250 germplasm NA B09 15848169 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001142 5 Linoleic acid (C18:2) GWAS 250 germplasm NA A04 82199580 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001143 5 Linoleic acid (C18:2) GWAS 250 germplasm NA A07 45014402 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001144 5 Linoleic acid (C18:2) GWAS 250 germplasm NA A08 13807926 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001145 5 Linoleic acid (C18:2) GWAS 250 germplasm NA A09 113164392 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001146 5 Linoleic acid (C18:2) GWAS 250 germplasm NA A09 113515257 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001147 5 Linoleic acid (C18:2) GWAS 250 germplasm NA A09 113515424 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001148 5 Linoleic acid (C18:2) GWAS 250 germplasm NA A09 114106219 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001149 5 Linoleic acid (C18:2) GWAS 250 germplasm NA A09 115528661 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001150 5 Linoleic acid (C18:2) GWAS 250 germplasm NA A09 115782994 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001151 5 Linoleic acid (C18:2) GWAS 250 germplasm NA A09 115784659 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001152 5 Linoleic acid (C18:2) GWAS 250 germplasm NA A09 115958917 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001153 5 Linoleic acid (C18:2) GWAS 250 germplasm NA A09 114140847 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001154 5 Linoleic acid (C18:2) GWAS 250 germplasm NA B06 120868183 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001155 5 Linoleic acid (C18:2) GWAS 250 germplasm NA B09 15848169 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001156 5 Arachidic acid (C20:0) GWAS 250 germplasm NA B04 49956612 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001157 5 Arachidic acid (C20:0) GWAS 250 germplasm NA B06 125302832 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001158 5 Arachidic acid (C20:0) GWAS 250 germplasm NA B06 127446433 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001159 5 Arachidic acid (C20:0) GWAS 250 germplasm NA B06 128423460 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001160 5 Arachidic acid (C20:0) GWAS 250 germplasm NA B06 125245720 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001161 5 Gadoleic acid (C20:1) GWAS 250 germplasm NA A02 5050188 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001162 5 Gadoleic acid (C20:1) GWAS 250 germplasm NA A06 108577126 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001163 5 Gadoleic acid (C20:1) GWAS 250 germplasm NA A06 108613799 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001164 5 Gadoleic acid (C20:1) GWAS 250 germplasm NA A10 42556069 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001165 5 Gadoleic acid (C20:1) GWAS 250 germplasm NA B04 34033229 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001166 5 Gadoleic acid (C20:1) GWAS 250 germplasm NA B04 95558185 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001167 5 Gadoleic acid (C20:1) GWAS 250 germplasm NA B04 108482942 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001168 5 Gadoleic acid (C20:1) GWAS 250 germplasm NA B06 122677790 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001169 5 Gadoleic acid (C20:1) GWAS 250 germplasm NA B06 125245720 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001170 5 Gadoleic acid (C20:1) GWAS 250 germplasm NA B06 125302832 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001171 5 Gadoleic acid (C20:1) GWAS 250 germplasm NA B06 129049126 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001172 5 Lignoceric acid (C24:0) GWAS 250 germplasm NA A02 20879351 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001173 5 Lignoceric acid (C24:0) GWAS 250 germplasm NA A02 20879333 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001174 5 Lignoceric acid (C24:0) GWAS 250 germplasm NA A02 20879334 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001175 5 Lignoceric acid (C24:0) GWAS 250 germplasm NA A02 20879365 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001176 5 Lignoceric acid (C24:0) GWAS 250 germplasm NA A02 20879409 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001177 5 Lignoceric acid (C24:0) GWAS 250 germplasm NA A03 121933071 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001178 5 Lignoceric acid (C24:0) GWAS 250 germplasm NA A03 121933185 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001179 5 Lignoceric acid (C24:0) GWAS 250 germplasm NA A05 1804376 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001180 5 Lignoceric acid (C24:0) GWAS 250 germplasm NA A05 4209573 0 0 0 < 4.73×10−7 10.1371/journal.pone.0279650 NA NA t3818.T001181 Qsw_A06.1 3 100 seed weight QTL-seq Chico × ICGV 02251 RIL A06_7236424 NA 0 0 A06_10880524 0 0 83.2 6.9 10.1002/tpg2.20265 NA NA t3818.T001182 Qsw_B07.1 3 100 seed weight QTL-seq Chico × ICGV 02251 RIL B07_10207119 NA 0 0 B07_28885572 0 0 20.5 6.9 10.1002/tpg2.20265 NA NA t3818.T001183 Qsw_B09.1 3 100 seed weight QTL-seq Chico × ICGV 02251 RIL B09_12164735 NA 0 0 B09_143049727 0 0 10 6.6 10.1002/tpg2.20265 NA NA t3818.T001184 Qsw_B06.1 3 100 seed weight QTL-seq Chico × ICGV 02251 RIL B06_135400950 NA 0 0 B06_116418702 0 0 19.7 4.9 10.1002/tpg2.20265 NA NA t3818.T001185 qMIA04a 4 Maturity Index Interval mapping Harari × IGC119 RIL AX-176819644_A04 NA A04 119 0 AX-147221341_A04 A04 127 0 75.75–92.00 6.44 10.1038/s41598-022-19653-z NA NA t3818.T001186 qMIA08_2a 4 Maturity Index Interval mapping Harari × IGC119 RIL AX-177637914_A08 NA A08_2 48 0 AX-176821868_A08 A08_2 51 0 5.19–20.84 4.02 10.1038/s41598-022-19653-z NA NA t3818.T001187 qMIB02 4 Maturity Index Interval mapping Harari × IGC119 RIL AX-176794798_B02 NA B02 106 0 AX-176812478_B02 B02 106 0 18.63–19.02 4.96 10.1038/s41598-022-19653-z NA NA t3818.T001188 qMIB04 4 Maturity Index Interval mapping Harari × IGC119 RIL AX-176802465_B04 NA B04 56 0 AX-176799466_B04 B04 57 0 39.06–39.46 3.74 10.1038/s41598-022-19653-z NA NA t3818.T001189 qMIA04b 4 Maturity Index Interval mapping Harari × IGC119 RIL AX-176819644_A04 NA A04 119 0 AX-147221341_A04 A04 127 0 75.75–92.00 4.48 10.1038/s41598-022-19653-z NA NA t3818.T001190 qMIA08_2b 4 Maturity Index Interval mapping Harari × IGC119 RIL AX-177639781_A08 NA A08_2 50 0 AX-176821672_A08 A08_2 51 0 16.63–21.24 4.53 10.1038/s41598-022-19653-z NA NA t3818.T001191 4 Lateral branch angle GWAS 103 accessions AX-176792214 NA 1 5676938 0 0 0 3.1 10.1186/s12864-022-08640-3 NA NA t3818.T001192 4 Lateral branch angle GWAS 103 accessions AX-147220276 NA 4 88049958 0 0 0 3.29 10.1186/s12864-022-08640-3 NA NA t3818.T001193 4 Lateral branch angle GWAS 103 accessions AX-176812753 NA 4 11518168 0 0 0 3.12 10.1186/s12864-022-08640-3 NA NA t3818.T001194 4 Lateral branch angle GWAS 103 accessions AX-176805320 NA 4 11519148 0 0 0 3.12 10.1186/s12864-022-08640-3 NA NA t3818.T001195 4 Lateral branch angle GWAS 103 accessions AX-176795188 NA 4 101622076 0 0 0 3.12 10.1186/s12864-022-08640-3 NA NA t3818.T001196 4 Lateral branch angle GWAS 103 accessions AX-176805974 NA 4 101656655 0 0 0 3.12 10.1186/s12864-022-08640-3 NA NA t3818.T001197 4 Lateral branch angle GWAS 103 accessions AX-176800474 NA 4 101794652 0 0 0 3.12 10.1186/s12864-022-08640-3 NA NA t3818.T001198 4 Lateral branch angle GWAS 103 accessions AX-176801418 NA 4 58618730 0 0 0 3.1 10.1186/s12864-022-08640-3 NA NA t3818.T001199 4 Lateral branch angle GWAS 103 accessions AX-176795352 NA 4 11517909 0 0 0 3.04 10.1186/s12864-022-08640-3 NA NA t3818.T001200 4 Lateral branch angle GWAS 103 accessions AX-147221637 NA 5 7049419 0 0 0 3.26 10.1186/s12864-022-08640-3 NA NA t3818.T001201 4 Lateral branch angle GWAS 103 accessions AX-147226655 NA 6 110138057 0 0 0 4.07 10.1186/s12864-022-08640-3 NA NA t3818.T001202 4 Lateral branch angle GWAS 103 accessions AX-147232753 NA 9 10663409 0 0 0 3.21 10.1186/s12864-022-08640-3 NA NA t3818.T001203 4 Lateral branch angle GWAS 103 accessions AX-147235889 NA 10 44591641 0 0 0 3.52 10.1186/s12864-022-08640-3 NA NA t3818.T001204 4 Lateral branch angle GWAS 103 accessions AX-176793547 NA 14 64739604 0 0 0 3.56 10.1186/s12864-022-08640-3 NA NA t3818.T001205 4 Lateral branch angle GWAS 103 accessions AX-176804663 NA 14 20502112 0 0 0 3.43 10.1186/s12864-022-08640-3 NA NA t3818.T001206 4 Lateral branch angle GWAS 103 accessions AX-147251085 NA 15 144353467 0 0 0 3.42 10.1186/s12864-022-08640-3 NA NA t3818.T001207 4 Lateral branch angle GWAS 103 accessions AX-147254206 NA 16 135227462 0 0 0 4.18 10.1186/s12864-022-08640-3 NA NA t3818.T001208 4 Lateral branch angle GWAS 103 accessions AX-147254196 NA 16 135069925 0 0 0 3.32 10.1186/s12864-022-08640-3 NA NA t3818.T001209 4 Lateral branch angle GWAS 103 accessions AX-147254204 NA 16 135176210 0 0 0 3.3 10.1186/s12864-022-08640-3 NA NA t3818.T001210 4 Extent radius GWAS 103 accessions AX-176798127 NA 5 32468191 0 0 0 3.68 10.1186/s12864-022-08640-3 NA NA t3818.T001211 4 Extent radius GWAS 103 accessions AX-147223814 NA 5 106305542 0 0 0 3 10.1186/s12864-022-08640-3 NA NA t3818.T001212 4 Extent radius GWAS 103 accessions AX-176797149 NA 15 29316793 0 0 0 3.68 10.1186/s12864-022-08640-3 NA NA t3818.T001213 4 Extent radius GWAS 103 accessions AX-176792618 NA 15 28864664 0 0 0 3.5 10.1186/s12864-022-08640-3 NA NA t3818.T001214 4 Extent radius GWAS 103 accessions AX-147254196 NA 16 135069925 0 0 0 4.96 10.1186/s12864-022-08640-3 NA NA t3818.T001215 4 Extent radius GWAS 103 accessions AX-176809834 NA 16 2362556 0 0 0 3.14 10.1186/s12864-022-08640-3 NA NA t3818.T001216 4 Extent radius GWAS 103 accessions AX-176806386 NA 17 18553475 0 0 0 3.2 10.1186/s12864-022-08640-3 NA NA t3818.T001217 4 Extent radius GWAS 103 accessions AX-176817808 NA 17 11291810 0 0 0 3.05 10.1186/s12864-022-08640-3 NA NA t3818.T001218 4 Extent radius GWAS 103 accessions AX-176810970 NA 17 11421301 0 0 0 3.05 10.1186/s12864-022-08640-3 NA NA t3818.T001219 4 Extent radius GWAS 103 accessions AX-147255025 NA 17 11796265 0 0 0 3.05 10.1186/s12864-022-08640-3 NA NA t3818.T001220 4 Extent radius GWAS 103 accessions AX-177638806 NA 17 12444126 0 0 0 3.05 10.1186/s12864-022-08640-3 NA NA t3818.T001221 4 Extent radius GWAS 103 accessions AX-177637880 NA 17 12758016 0 0 0 3.05 10.1186/s12864-022-08640-3 NA NA t3818.T001222 4 Extent radius GWAS 103 accessions AX-176818695 NA 17 17400993 0 0 0 3.05 10.1186/s12864-022-08640-3 NA NA t3818.T001223 4 Extent radius GWAS 103 accessions AX-177644547 NA 17 17400993 0 0 0 3.05 10.1186/s12864-022-08640-3 NA NA t3818.T001224 4 Extent radius GWAS 103 accessions AX-177638883 NA 17 18950781 0 0 0 3.05 10.1186/s12864-022-08640-3 NA NA t3818.T001225 4 Extent radius GWAS 103 accessions AX-176798120 NA 17 20276565 0 0 0 3.05 10.1186/s12864-022-08640-3 NA NA t3818.T001226 4 Index of plant type GWAS 103 accessions AX-147221270 NA 4 120697576 0 0 0 5.83 10.1186/s12864-022-08640-3 NA NA t3818.T001227 4 Index of plant type GWAS 103 accessions AX-176803063 NA 9 291318 0 0 0 6.87 10.1186/s12864-022-08640-3 NA NA t3818.T001228 4 Index of plant type GWAS 103 accessions AX-147248798 NA 14 130877416 0 0 0 5.91 10.1186/s12864-022-08640-3 NA NA t3818.T001229 4 Index of plant type GWAS 103 accessions AX-147248787 NA 14 130856189 0 0 0 4.61 10.1186/s12864-022-08640-3 NA NA t3818.T001230 4 Index of plant type GWAS 103 accessions AX-176823682 NA 20 123110042 0 0 0 4.25 10.1186/s12864-022-08640-3 NA NA t3818.T001231 4 Index of plant type GWAS 103 accessions AX-147213787 NA 2 52026360 0 0 0 3.31 10.1186/s12864-022-08640-3 NA NA t3818.T001232 4 Lateral branch length GWAS 103 accessions AX-176798127 NA 5 32468191 0 0 0 4.28 10.1186/s12864-022-08640-3 NA NA t3818.T001233 4 Lateral branch length GWAS 103 accessions AX-147223780 NA 5 105764065 0 0 0 3.48 10.1186/s12864-022-08640-3 NA NA t3818.T001234 4 Lateral branch length GWAS 103 accessions AX-176796238 NA 5 104023520 0 0 0 3.48 10.1186/s12864-022-08640-3 NA NA t3818.T001235 4 Lateral branch length GWAS 103 accessions AX-176814912 NA 5 62228147 0 0 0 3.13 10.1186/s12864-022-08640-3 NA NA t3818.T001236 4 Lateral branch length GWAS 103 accessions AX-176822343 NA 5 59674162 0 0 0 3.08 10.1186/s12864-022-08640-3 NA NA t3818.T001237 4 Lateral branch length GWAS 103 accessions AX-176797149 NA 15 29316793 0 0 0 4.28 10.1186/s12864-022-08640-3 NA NA t3818.T001238 4 Lateral branch length GWAS 103 accessions AX-176792618 NA 15 28864664 0 0 0 4.27 10.1186/s12864-022-08640-3 NA NA t3818.T001239 4 Lateral branch length GWAS 103 accessions AX-176810022 NA 15 145958219 0 0 0 3.74 10.1186/s12864-022-08640-3 NA NA t3818.T001240 4 Lateral branch length GWAS 103 accessions AX-147250474 NA 15 129381149 0 0 0 3.2 10.1186/s12864-022-08640-3 NA NA t3818.T001241 4 Lateral branch length GWAS 103 accessions AX-176819482 NA 15 126045337 0 0 0 3.11 10.1186/s12864-022-08640-3 NA NA t3818.T001242 4 Lateral branch length GWAS 103 accessions AX-147254196 NA 16 135069925 0 0 0 4.24 10.1186/s12864-022-08640-3 NA NA t3818.T001243 4 Lateral branch length GWAS 103 accessions AX-176821018 NA 19 128388128 0 0 0 3 10.1186/s12864-022-08640-3 NA NA t3818.T001244 4 Main stem height GWAS 103 accessions AX-176805993 NA 3 124706141 0 0 0 4.78 10.1186/s12864-022-08640-3 NA NA t3818.T001245 4 Main stem height GWAS 103 accessions AX-176812621 NA 4 27220270 0 0 0 5.71 10.1186/s12864-022-08640-3 NA NA t3818.T001246 4 Main stem height GWAS 103 accessions AX-176803436 NA 4 43672731 0 0 0 5.71 10.1186/s12864-022-08640-3 NA NA t3818.T001247 4 Main stem height GWAS 103 accessions AX-176811509 NA 4 73585852 0 0 0 5.03 10.1186/s12864-022-08640-3 NA NA t3818.T001248 4 Main stem height GWAS 103 accessions AX-147220444 NA 4 101534011 0 0 0 4.78 10.1186/s12864-022-08640-3 NA NA t3818.T001249 4 Main stem height GWAS 103 accessions AX-177638120 NA 7 66573812 0 0 0 5.27 10.1186/s12864-022-08640-3 NA NA t3818.T001250 4 Main stem height GWAS 103 accessions AX-177638387 NA 7 65115370 0 0 0 5.07 10.1186/s12864-022-08640-3 NA NA t3818.T001251 4 Main stem height GWAS 103 accessions AX-147228341 NA 7 45942702 0 0 0 4.49 10.1186/s12864-022-08640-3 NA NA t3818.T001252 4 Main stem height GWAS 103 accessions AX-176802722 NA 7 50745863 0 0 0 4.49 10.1186/s12864-022-08640-3 NA NA t3818.T001253 4 Main stem height GWAS 103 accessions AX-176804668 NA 7 54958888 0 0 0 4.49 10.1186/s12864-022-08640-3 NA NA t3818.T001254 4 Main stem height GWAS 103 accessions AX-177644532 NA 10 2709148 0 0 0 4.65 10.1186/s12864-022-08640-3 NA NA t3818.T001255 4 Main stem height GWAS 103 accessions AX-176820262 NA 17 10347054 0 0 0 4.95 10.1186/s12864-022-08640-3 NA NA t3818.T001256 4 Main stem height GWAS 103 accessions AX-147256096 NA 17 105991515 0 0 0 4.9 10.1186/s12864-022-08640-3 NA NA t3818.T001257 4 Main stem height GWAS 103 accessions AX-177637395 NA 17 9176911 0 0 0 4.58 10.1186/s12864-022-08640-3 NA NA t3818.T001258 4 Main stem height GWAS 103 accessions AX-176801688 NA 17 121093831 0 0 0 4.32 10.1186/s12864-022-08640-3 NA NA t3818.T001259 4 Main stem height GWAS 103 accessions AX-176799807 NA 18 103258895 0 0 0 4.54 10.1186/s12864-022-08640-3 NA NA t3818.T001260 4 Main stem height GWAS 103 accessions AX-176817932 NA 18 96048496 0 0 0 4.49 10.1186/s12864-022-08640-3 NA NA t3818.T001261 4 Main stem height GWAS 103 accessions AX-176798062 NA 18 98749831 0 0 0 4.49 10.1186/s12864-022-08640-3 NA NA t3818.T001262 4 Main stem height GWAS 103 accessions AX-176807772 NA 18 101547178 0 0 0 4.49 10.1186/s12864-022-08640-3 NA NA t3818.T001263 4 Main stem height GWAS 103 accessions AX-176817947 NA 18 101858265 0 0 0 4.49 10.1186/s12864-022-08640-3 NA NA t3818.T001264 4 Main stem height GWAS 103 accessions AX-177637253 NA 18 103258895 0 0 0 4.49 10.1186/s12864-022-08640-3 NA NA t3818.T001265 4 Main stem height GWAS 103 accessions AX-176794504 NA 18 129311474 0 0 0 4.49 10.1186/s12864-022-08640-3 NA NA t3818.T001266 4 Main stem height GWAS 103 accessions AX-176820517 NA 19 114568297 0 0 0 4.49 10.1186/s12864-022-08640-3 NA NA t3818.T001267 4 Main stem height GWAS 103 accessions AX-176804144 NA 20 115730891 0 0 0 4.83 10.1186/s12864-022-08640-3 NA NA t3818.T001268 4 Main stem height GWAS 103 accessions AX-177638677 NA 20 120214136 0 0 0 4.83 10.1186/s12864-022-08640-3 NA NA t3818.T001269 4 Main stem height GWAS 103 accessions AX-177637104 NA 20 121402159 0 0 0 4.83 10.1186/s12864-022-08640-3 NA NA t3818.T001270 4 Main stem height GWAS 103 accessions AX-176804925 NA 20 112467768 0 0 0 4.6 10.1186/s12864-022-08640-3 NA NA t3818.T001271 4 Main stem height GWAS 103 accessions AX-176822799 NA 20 116425340 0 0 0 4.6 10.1186/s12864-022-08640-3 NA NA t3818.T001272 4 Main stem height GWAS 103 accessions AX-176801688 NA 17 121093831 0 0 0 4.32 10.1186/s12864-022-08640-3 NA NA t3818.T001273 4 Main stem height GWAS 103 accessions AX-176822282 NA 14 30221792 0 0 0 4.28 10.1186/s12864-022-08640-3 NA NA t3818.T001274 4 Main stem height GWAS 103 accessions AX-176817941 NA 18 103194207 0 0 0 4.16 10.1186/s12864-022-08640-3 NA NA t3818.T001275 4 Main stem height GWAS 103 accessions AX-176807024 NA 3 115530645 0 0 0 4.11 10.1186/s12864-022-08640-3 NA NA t3818.T001276 4 Main stem height GWAS 103 accessions AX-176803234 NA 7 43817432 0 0 0 4.11 10.1186/s12864-022-08640-3 NA NA t3818.T001277 4 Main stem height GWAS 103 accessions AX-177637849 NA 7 51512828 0 0 0 4.11 10.1186/s12864-022-08640-3 NA NA t3818.T001278 4 Main stem height GWAS 103 accessions AX-176794936 NA 18 105532652 0 0 0 4.11 10.1186/s12864-022-08640-3 NA NA t3818.T001279 4 Main stem height GWAS 103 accessions AX-176802597 NA 18 106146502 0 0 0 4.11 10.1186/s12864-022-08640-3 NA NA t3818.T001280 4 Main stem height GWAS 103 accessions AX-147258684 NA 18 106275540 0 0 0 4.11 10.1186/s12864-022-08640-3 NA NA t3818.T001281 4 Main stem height GWAS 103 accessions AX-176805714 NA 19 106118827 0 0 0 4.11 10.1186/s12864-022-08640-3 NA NA t3818.T001282 4 Lateral branch angle BSA-seq Jihua 5 × M130 F2 NA B05 142610834 0 B05 146688220 0 10.1186/s12864-022-08640-3 NA NA t3818.T001283 1 Shell infection index GWAS 99 accessions SNP00688 NA 1 40368467 0 0 0 2.07e-05 10.1186/s12870-022-03582-0 NA NA t3818.T001284 1 Shell infection index GWAS 99 accessions InDel21071 NA 12 9357931 0 0 0 6.92e-06 10.1186/s12870-022-03582-0 NA NA t3818.T001285 1 Shell infection index GWAS 99 accessions SNP21070 NA 12 9277537 0 0 0 1.13e-05 10.1186/s12870-022-03582-0 NA NA t3818.T001286 1 Shell infection index GWAS 99 accessions SNP21188 NA 12 14933055 0 0 0 2.13e-05 10.1186/s12870-022-03582-0 NA NA t3818.T001287 1 Shell infection index GWAS 99 accessions SNP21021 NA 12 6844062 0 0 0 2.22e-05 10.1186/s12870-022-03582-0 NA NA t3818.T001288 1 Shell infection index GWAS 99 accessions InDel43846 NA 20 112260595 0 0 0 2.23e-05 10.1186/s12870-022-03582-0 NA NA t3818.T001289 1 Seed infection index GWAS 99 accessions SNP22555 NA 12 100237479 0 0 0 3.6e-06 10.1186/s12870-022-03582-0 NA NA t3818.T001290 1 Seed infection index GWAS 99 accessions SNP22420 NA 12 93852971 0 0 0 2.14e-05 10.1186/s12870-022-03582-0 NA NA t3818.T001291 1 Seed infection index GWAS 99 accessions InDel36369 NA 18 38548488 0 0 0 9.42e-06 10.1186/s12870-022-03582-0 NA NA t3818.T001292 1 Seed infection index GWAS 99 accessions SNP42459 NA 20 593672 0 0 0 1.71e-05 10.1186/s12870-022-03582-0 NA NA t3818.T001293 1 Seed infection index GWAS 99 accessions SNP43163 NA 20 53492328 0 0 0 2.25e-05 10.1186/s12870-022-03582-0 NA NA t3818.T001294 5 Aflatoxin content 2014 GWAS 99 accessions InDel15210 NA 9 14197913 0 0 0 4.35e-06 10.1186/s12870-022-03582-0 NA NA t3818.T001295 5 Aflatoxin content 2015 GWAS 99 accessions InDel17247 NA 10 23667814 0 0 0 1.52e-05 10.1186/s12870-022-03582-0 NA NA t3818.T001296 5 Aflatoxin content 2016 GWAS 99 accessions SNP37276 NA 18 80753727 0 0 0 8.9e-06 10.1186/s12870-022-03582-0 NA NA t3818.T001297 5 Aflatoxin content 2017 GWAS 99 accessions SNP38307 NA 18 129415431 0 0 0 1.09e-05 10.1186/s12870-022-03582-0 NA NA t3818.T001298 5 Aflatoxin content 2018 GWAS 99 accessions SNP22577 NA 12 101526304 0 0 0 1.9e-05 10.1186/s12870-022-03582-0 NA NA t3818.T001299 3 Hundred seed weight GWAS 178 varieties AX-147226320 NA 16 146400676 0 0 0 3.73e-06 10.3389/fgene.2022.845602 NA NA t3818.T001300 3 Hundred seed weight GWAS 178 varieties AX-147253833 NA 16 146387758 0 0 0 3.88e-06 10.3389/fgene.2022.845602 NA NA t3818.T001301 3 Hundred seed weight GWAS 178 varieties AX-147226318 NA 16 146397542 0 0 0 3.99e-06 10.3389/fgene.2022.845602 NA NA t3818.T001302 4 Main stem height GWAS 178 varieties AX-176796712 NA 6 431595 0 0 0 3.78e-06 10.3389/fgene.2022.845602 NA NA t3818.T001303 4 Pod shape GWAS 178 varieties AX-177637158 NA 18 22954390 0 0 0 5.28e-12 10.3389/fgene.2022.845602 NA NA t3818.T001304 4 Pod shape GWAS 178 varieties AX-147230989 NA 8 37744869 0 0 0 8.74e-11 10.3389/fgene.2022.845602 NA NA t3818.T001305 4 Pod shape GWAS 178 varieties AX-177642459 NA 18 23819479 0 0 0 4.37e-10 10.3389/fgene.2022.845602 NA NA t3818.T001306 4 Pod shape GWAS 178 varieties AX-147257972 NA 18 24419591 0 0 0 5.95e-10 10.3389/fgene.2022.845602 NA NA t3818.T001307 4 Pod shape GWAS 178 varieties AX-147231045 NA 18 23301353 0 0 0 1.87e-09 10.3389/fgene.2022.845602 NA NA t3818.T001308 4 Pod shape GWAS 178 varieties AX-177637645 NA 18 21514431 0 0 0 1.06e-08 10.3389/fgene.2022.845602 NA NA t3818.T001309 4 Pod shape GWAS 178 varieties AX-177642447 NA 18 21629866 0 0 0 1.06e-08 10.3389/fgene.2022.845602 NA NA t3818.T001310 4 Pod shape GWAS 178 varieties AX-177642954 NA 18 23360811 0 0 0 1.06e-08 10.3389/fgene.2022.845602 NA NA t3818.T001311 4 Pod shape GWAS 178 varieties AX-177642677 NA 18 25617047 0 0 0 1.11e-08 10.3389/fgene.2022.845602 NA NA t3818.T001312 4 Pod shape GWAS 178 varieties AX-147231049 NA 18 23300470 0 0 0 1.8e-08 10.3389/fgene.2022.845602 NA NA t3818.T001313 4 Pod shape GWAS 178 varieties AX-176823909 NA 8 27541807 0 0 0 3.08e-08 10.3389/fgene.2022.845602 NA NA t3818.T001314 4 Pod shape GWAS 178 varieties AX-177640524 NA 8 27653002 0 0 0 3.08e-08 10.3389/fgene.2022.845602 NA NA t3818.T001315 4 Pod shape GWAS 178 varieties AX-147230465 NA 8 27968976 0 0 0 3.08e-08 10.3389/fgene.2022.845602 NA NA t3818.T001316 4 Pod shape GWAS 178 varieties AX-177644262 NA 8 37975312 0 0 0 3.3e-08 10.3389/fgene.2022.845602 NA NA t3818.T001317 4 Pod shape GWAS 178 varieties AX-177637204 NA 18 20964072 0 0 0 3.49e-08 10.3389/fgene.2022.845602 NA NA t3818.T001318 4 Pod shape GWAS 178 varieties AX-177639645 NA 18 22824282 0 0 0 3.49e-08 10.3389/fgene.2022.845602 NA NA t3818.T001319 4 Pod shape GWAS 178 varieties AX-176822147 NA 18 22991224 0 0 0 3.49e-08 10.3389/fgene.2022.845602 NA NA t3818.T001320 4 Pod shape GWAS 178 varieties AX-147257932 NA 18 23231635 0 0 0 3.49e-08 10.3389/fgene.2022.845602 NA NA t3818.T001321 4 Pod shape GWAS 178 varieties AX-147231048 NA 18 23300776 0 0 0 3.49e-08 10.3389/fgene.2022.845602 NA NA t3818.T001322 4 Pod shape GWAS 178 varieties AX-177643415 NA 18 23476879 0 0 0 3.49e-08 10.3389/fgene.2022.845602 NA NA t3818.T001323 4 Pod shape GWAS 178 varieties AX-177639362 NA 18 24941294 0 0 0 3.49e-08 10.3389/fgene.2022.845602 NA NA t3818.T001324 4 Pod shape GWAS 178 varieties AX-177639196 NA 18 25253425 0 0 0 3.49e-08 10.3389/fgene.2022.845602 NA NA t3818.T001325 4 Pod shape GWAS 178 varieties AX-177639785 NA 18 25956926 0 0 0 3.49e-08 10.3389/fgene.2022.845602 NA NA t3818.T001326 4 Pod shape GWAS 178 varieties AX-147258005 NA 18 26312038 0 0 0 3.49e-08 10.3389/fgene.2022.845602 NA NA t3818.T001327 4 Pod shape GWAS 178 varieties AX-177637374 NA 18 26113120 0 0 0 4.42e-08 10.3389/fgene.2022.845602 NA NA t3818.T001328 4 Pod shape GWAS 178 varieties AX-177642225 NA 8 38119174 0 0 0 6.37e-08 10.3389/fgene.2022.845602 NA NA t3818.T001329 4 Pod shape GWAS 178 varieties AX-176820800 NA 17 132623767 0 0 0 7.85e-08 10.3389/fgene.2022.845602 NA NA t3818.T001330 4 Pod shape GWAS 178 varieties AX-177643183 NA 18 28057044 0 0 0 7.85e-08 10.3389/fgene.2022.845602 NA NA t3818.T001331 4 Pod shape GWAS 178 varieties AX-177641883 NA 18 30322396 0 0 0 7.85e-08 10.3389/fgene.2022.845602 NA NA t3818.T001332 4 Pod shape GWAS 178 varieties AX-147246813 NA 14 5267487 0 0 0 2.12e-07 10.3389/fgene.2022.845602 NA NA t3818.T001333 4 Pod shape GWAS 178 varieties AX-177641968 NA 18 25290044 0 0 0 2.34e-07 10.3389/fgene.2022.845602 NA NA t3818.T001334 4 Pod shape GWAS 178 varieties AX-177643060 NA 18 22424244 0 0 0 2.59e-07 10.3389/fgene.2022.845602 NA NA t3818.T001335 4 Pod shape GWAS 178 varieties AX-176815501 NA 13 23501197 0 0 0 2.76e-07 10.3389/fgene.2022.845602 NA NA t3818.T001336 4 Pod shape GWAS 178 varieties AX-176801493 NA 5 107184495 0 0 0 2.79e-07 10.3389/fgene.2022.845602 NA NA t3818.T001337 4 Pod shape GWAS 178 varieties AX-147242465 NA 12 113772191 0 0 0 2.79e-07 10.3389/fgene.2022.845602 NA NA t3818.T001338 4 Pod shape GWAS 178 varieties AX-147242469 NA 12 113776148 0 0 0 2.79e-07 10.3389/fgene.2022.845602 NA NA t3818.T001339 4 Pod shape GWAS 178 varieties AX-176814180 NA 12 114442293 0 0 0 2.79e-07 10.3389/fgene.2022.845602 NA NA t3818.T001340 4 Pod shape GWAS 178 varieties AX-147215036 NA 12 114585103 0 0 0 2.79e-07 10.3389/fgene.2022.845602 NA NA t3818.T001341 4 Pod shape GWAS 178 varieties AX-147215048 NA 12 114799690 0 0 0 2.79e-07 10.3389/fgene.2022.845602 NA NA t3818.T001342 4 Pod shape GWAS 178 varieties AX-147242547 NA 12 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varieties AX-147215053 NA 12 114939765 0 0 0 2.92e-07 10.3389/fgene.2022.845602 NA NA t3818.T001368 4 Pod shape GWAS 178 varieties AX-147242541 NA 12 115013874 0 0 0 3.61e-07 10.3389/fgene.2022.845602 NA NA t3818.T001369 4 Pod shape GWAS 178 varieties AX-177639145 NA 18 28504232 0 0 0 3.87e-07 10.3389/fgene.2022.845602 NA NA t3818.T001370 4 Pod shape GWAS 178 varieties AX-176791323 NA 18 28651082 0 0 0 3.87e-07 10.3389/fgene.2022.845602 NA NA t3818.T001371 4 Pod shape GWAS 178 varieties AX-177642217 NA 18 29648294 0 0 0 3.87e-07 10.3389/fgene.2022.845602 NA NA t3818.T001372 4 Pod shape GWAS 178 varieties AX-177638137 NA 18 30832226 0 0 0 3.87e-07 10.3389/fgene.2022.845602 NA NA t3818.T001373 4 Pod shape GWAS 178 varieties AX-177642396 NA 18 32332596 0 0 0 3.87e-07 10.3389/fgene.2022.845602 NA NA t3818.T001374 4 Pod shape GWAS 178 varieties AX-177637407 NA 18 27203735 0 0 0 3.92e-07 10.3389/fgene.2022.845602 NA NA t3818.T001375 4 Pod shape GWAS 178 varieties AX-177638850 NA 18 29546850 0 0 0 3.94e-07 10.3389/fgene.2022.845602 NA NA t3818.T001376 4 Pod shape GWAS 178 varieties AX-177638025 NA 15 150830549 0 0 0 3.98e-07 10.3389/fgene.2022.845602 NA NA t3818.T001377 4 Pod shape GWAS 178 varieties AX-147230985 NA 18 20118984 0 0 0 3.98e-07 10.3389/fgene.2022.845602 NA NA t3818.T001378 4 Pod shape GWAS 178 varieties AX-177642712 NA 18 18432425 0 0 0 4.03e-07 10.3389/fgene.2022.845602 NA NA t3818.T001379 4 Pod shape GWAS 178 varieties AX-177643999 NA 18 30130967 0 0 0 4.04e-07 10.3389/fgene.2022.845602 NA NA t3818.T001380 4 Pod shape GWAS 178 varieties AX-177639881 NA 8 4796695 0 0 0 4.54e-07 10.3389/fgene.2022.845602 NA NA t3818.T001381 4 Pod shape GWAS 178 varieties AX-177642807 NA 18 18257551 0 0 0 5.04e-07 10.3389/fgene.2022.845602 NA NA t3818.T001382 4 Pod shape GWAS 178 varieties AX-177640835 NA 10 85019204 0 0 0 7.25e-07 10.3389/fgene.2022.845602 NA NA t3818.T001383 4 Pod shape GWAS 178 varieties AX-147215163 NA 12 117688418 0 0 0 1.02e-06 10.3389/fgene.2022.845602 NA NA t3818.T001384 4 Pod shape GWAS 178 varieties AX-147215164 NA 12 117688446 0 0 0 1.02e-06 10.3389/fgene.2022.845602 NA NA t3818.T001385 4 Pod shape GWAS 178 varieties AX-176822953 NA 17 126799280 0 0 0 1.05e-06 10.3389/fgene.2022.845602 NA NA t3818.T001386 4 Pod shape GWAS 178 varieties AX-177640218 NA 8 35573006 0 0 0 1.09e-06 10.3389/fgene.2022.845602 NA NA t3818.T001387 4 Pod shape GWAS 178 varieties AX-147250742 NA 15 149531482 0 0 0 1.12e-06 10.3389/fgene.2022.845602 NA NA t3818.T001388 4 Pod shape GWAS 178 varieties AX-177644128 NA 8 40644774 0 0 0 1.49e-06 10.3389/fgene.2022.845602 NA NA t3818.T001389 4 Pod shape GWAS 178 varieties AX-176792389 NA 3 39740379 0 0 0 1.66e-06 10.3389/fgene.2022.845602 NA NA t3818.T001390 4 Pod shape GWAS 178 varieties AX-147227104 NA 17 3217320 0 0 0 1.69e-06 10.3389/fgene.2022.845602 NA NA t3818.T001391 4 Pod shape GWAS 178 varieties AX-176816767 NA 12 117015225 0 0 0 1.69e-06 10.3389/fgene.2022.845602 NA NA t3818.T001392 4 Pod shape GWAS 178 varieties AX-176802008 NA 16 6845331 0 0 0 1.72e-06 10.3389/fgene.2022.845602 NA NA t3818.T001393 4 Pod shape GWAS 178 varieties AX-147242587 NA 12 115666615 0 0 0 1.75e-06 10.3389/fgene.2022.845602 NA NA t3818.T001394 4 Pod shape GWAS 178 varieties AX-147264699 NA 20 131876430 0 0 0 1.78e-06 10.3389/fgene.2022.845602 NA NA t3818.T001395 4 Pod shape GWAS 178 varieties AX-176808410 NA 3 38402942 0 0 0 1.79e-06 10.3389/fgene.2022.845602 NA NA t3818.T001396 4 Pod shape GWAS 178 varieties AX-147215113 NA 12 116250298 0 0 0 1.83e-06 10.3389/fgene.2022.845602 NA NA t3818.T001397 4 Pod shape GWAS 178 varieties AX-177640183 NA 17 126576875 0 0 0 2.34e-06 10.3389/fgene.2022.845602 NA NA t3818.T001398 4 Pod shape GWAS 178 varieties AX-177643609 NA 18 29861032 0 0 0 2.46e-06 10.3389/fgene.2022.845602 NA NA t3818.T001399 4 Pod shape GWAS 178 varieties AX-147258162 NA 18 34649394 0 0 0 2.46e-06 10.3389/fgene.2022.845602 NA NA t3818.T001400 4 Pod shape GWAS 178 varieties AX-176816872 NA 3 32036027 0 0 0 2.75e-06 10.3389/fgene.2022.845602 NA NA t3818.T001401 4 Pod shape GWAS 178 varieties AX-177640199 NA 8 28520079 0 0 0 3.04e-06 10.3389/fgene.2022.845602 NA NA t3818.T001402 4 Pod shape GWAS 178 varieties AX-177638704 NA 10 110427959 0 0 0 3.22e-06 10.3389/fgene.2022.845602 NA NA t3818.T001403 4 Pod shape GWAS 178 varieties AX-176793019 NA 8 14326353 0 0 0 3.64e-06 10.3389/fgene.2022.845602 NA NA t3818.T001404 4 Pod shape GWAS 178 varieties AX-177640192 NA 8 27276186 0 0 0 3.9e-06 10.3389/fgene.2022.845602 NA NA t3818.T001405 4 Peel thickness GWAS 178 varieties AX-176816720 NA 2 88326862 0 0 0 6.73e-08 10.3389/fgene.2022.845602 NA NA t3818.T001406 4 Peel thickness GWAS 178 varieties AX-176811691 NA 2 88435149 0 0 0 6.73e-08 10.3389/fgene.2022.845602 NA NA t3818.T001407 4 Peel thickness GWAS 178 varieties AX-176805756 NA 2 88438447 0 0 0 6.73e-08 10.3389/fgene.2022.845602 NA NA t3818.T001408 4 Peel thickness GWAS 178 varieties AX-176812352 NA 2 89454396 0 0 0 7.61e-08 10.3389/fgene.2022.845602 NA NA t3818.T001409 4 Peel thickness GWAS 178 varieties AX-176793683 NA 2 87953094 0 0 0 9.54e-07 10.3389/fgene.2022.845602 NA NA t3818.T001410 4 Peel thickness GWAS 178 varieties AX-176811951 NA 2 86181131 0 0 0 2.77e-06 10.3389/fgene.2022.845602 NA NA t3818.T001411 4 Testa color GWAS 178 varieties AX-147258185 NA 18 35624985 0 0 0 1.98e-21 10.3389/fgene.2022.845602 NA NA t3818.T001412 4 Testa color GWAS 178 varieties AX-176794234 NA 18 36992841 0 0 0 8.86e-20 10.3389/fgene.2022.845602 NA NA t3818.T001413 4 Testa color GWAS 178 varieties AX-176799764 NA 16 8171953 0 0 0 8.89e-20 10.3389/fgene.2022.845602 NA NA t3818.T001414 4 Testa color GWAS 178 varieties AX-147257934 NA 18 23345097 0 0 0 8.89e-20 10.3389/fgene.2022.845602 NA NA t3818.T001415 4 Testa color GWAS 178 varieties AX-147259312 NA 18 129964244 0 0 0 1.73e-19 10.3389/fgene.2022.845602 NA NA t3818.T001416 4 Testa color GWAS 178 varieties AX-147231633 NA 18 128998471 0 0 0 2.64e-19 10.3389/fgene.2022.845602 NA NA t3818.T001417 4 Testa color GWAS 178 varieties AX-176804832 NA 18 14975252 0 0 0 3.43e-19 10.3389/fgene.2022.845602 NA NA t3818.T001418 4 Testa color GWAS 178 varieties AX-176802914 NA 11 146133405 0 0 0 7.89e-19 10.3389/fgene.2022.845602 NA NA t3818.T001419 4 Testa color GWAS 178 varieties AX-176797971 NA 18 22748204 0 0 0 7.89e-19 10.3389/fgene.2022.845602 NA NA t3818.T001420 4 Testa color GWAS 178 varieties AX-147231217 NA 18 115690617 0 0 0 7.89e-19 10.3389/fgene.2022.845602 NA NA t3818.T001421 4 Testa color GWAS 178 varieties AX-147258848 NA 18 117719462 0 0 0 7.89e-19 10.3389/fgene.2022.845602 NA NA t3818.T001422 4 Testa color GWAS 178 varieties AX-176799903 NA 18 35794430 0 0 0 1.12e-18 10.3389/fgene.2022.845602 NA NA t3818.T001423 4 Testa color GWAS 178 varieties AX-177641765 NA 18 110388728 0 0 0 4.28e-18 10.3389/fgene.2022.845602 NA NA t3818.T001424 4 Testa color GWAS 178 varieties AX-176800842 NA 16 8654502 0 0 0 4.41e-18 10.3389/fgene.2022.845602 NA NA t3818.T001425 4 Testa color GWAS 178 varieties AX-176806643 NA 18 23745737 0 0 0 6.29e-18 10.3389/fgene.2022.845602 NA NA t3818.T001426 4 Testa color GWAS 178 varieties AX-176812692 NA 18 9134349 0 0 0 2.97e-17 10.3389/fgene.2022.845602 NA NA t3818.T001427 4 Testa color GWAS 178 varieties AX-147251907 NA 16 8353797 0 0 0 3.78e-17 10.3389/fgene.2022.845602 NA NA t3818.T001428 4 Testa color GWAS 178 varieties AX-147258790 NA 8 41336114 0 0 0 5.06e-17 10.3389/fgene.2022.845602 NA NA t3818.T001429 4 Testa color GWAS 178 varieties AX-177637205 NA 10 96187086 0 0 0 5.48e-16 10.3389/fgene.2022.845602 NA NA t3818.T001430 4 Testa color GWAS 178 varieties AX-176800009 NA 18 129671850 0 0 0 4.78e-15 10.3389/fgene.2022.845602 NA NA t3818.T001431 4 Testa color GWAS 178 varieties AX-176813689 NA 10 110362628 0 0 0 6.99e-15 10.3389/fgene.2022.845602 NA NA t3818.T001432 4 Testa color GWAS 178 varieties AX-176809536 NA 16 143864066 0 0 0 1.15e-14 10.3389/fgene.2022.845602 NA NA t3818.T001433 4 Testa color GWAS 178 varieties AX-147239085 NA 11 136833094 0 0 0 1.36e-14 10.3389/fgene.2022.845602 NA NA t3818.T001434 4 Testa color GWAS 178 varieties AX-176819851 NA 11 137972102 0 0 0 1.67e-14 10.3389/fgene.2022.845602 NA NA t3818.T001435 4 Testa color GWAS 178 varieties AX-176792450 NA 11 146579409 0 0 0 2.43e-14 10.3389/fgene.2022.845602 NA NA t3818.T001436 4 Testa color GWAS 178 varieties AX-176811879 NA 15 36011862 0 0 0 4.63e-14 10.3389/fgene.2022.845602 NA NA t3818.T001437 4 Testa color GWAS 178 varieties AX-176817452 NA 15 40680415 0 0 0 4.68e-14 10.3389/fgene.2022.845602 NA NA t3818.T001438 4 Testa color GWAS 178 varieties AX-176819972 NA 15 121163431 0 0 0 5.8e-14 10.3389/fgene.2022.845602 NA NA t3818.T001439 4 Testa color GWAS 178 varieties AX-176802363 NA 15 10494855 0 0 0 5.87e-14 10.3389/fgene.2022.845602 NA NA t3818.T001440 4 Testa color GWAS 178 varieties AX-176797572 NA 15 6490667 0 0 0 6.25e-14 10.3389/fgene.2022.845602 NA NA t3818.T001441 4 Testa color GWAS 178 varieties AX-176797164 NA 18 30534330 0 0 0 6.34e-14 10.3389/fgene.2022.845602 NA NA t3818.T001442 4 Testa color GWAS 178 varieties AX-176798284 NA 15 29895918 0 0 0 6.78e-14 10.3389/fgene.2022.845602 NA NA t3818.T001443 4 Testa color GWAS 178 varieties AX-176806525 NA 11 136010587 0 0 0 7.8e-14 10.3389/fgene.2022.845602 NA NA t3818.T001444 4 Testa color GWAS 178 varieties AX-176804834 NA 11 136581892 0 0 0 7.8e-14 10.3389/fgene.2022.845602 NA NA t3818.T001445 4 Testa color GWAS 178 varieties AX-147239120 NA 11 137703217 0 0 0 7.8e-14 10.3389/fgene.2022.845602 NA NA t3818.T001446 4 Testa color GWAS 178 varieties AX-176813446 NA 11 138925152 0 0 0 7.8e-14 10.3389/fgene.2022.845602 NA NA t3818.T001447 4 Testa color GWAS 178 varieties AX-176797203 NA 11 141445831 0 0 0 7.8e-14 10.3389/fgene.2022.845602 NA NA t3818.T001448 4 Testa color GWAS 178 varieties AX-176819681 NA 11 142199718 0 0 0 7.8e-14 10.3389/fgene.2022.845602 NA NA t3818.T001449 4 Testa color GWAS 178 varieties AX-176801593 NA 11 142199788 0 0 0 7.8e-14 10.3389/fgene.2022.845602 NA NA t3818.T001450 4 Testa color GWAS 178 varieties AX-176819594 NA 11 145917405 0 0 0 7.8e-14 10.3389/fgene.2022.845602 NA NA t3818.T001451 4 Testa color GWAS 178 varieties AX-176802653 NA 11 145917475 0 0 0 7.8e-14 10.3389/fgene.2022.845602 NA NA t3818.T001452 4 Testa color GWAS 178 varieties AX-147236945 NA 10 113319161 0 0 0 1.05e-13 10.3389/fgene.2022.845602 NA NA t3818.T001453 4 Testa color GWAS 178 varieties AX-147221637 NA 18 123358995 0 0 0 1.15e-13 10.3389/fgene.2022.845602 NA NA t3818.T001454 4 Testa color GWAS 178 varieties AX-147235399 NA 10 7369372 0 0 0 1.33e-13 10.3389/fgene.2022.845602 NA NA t3818.T001455 4 Testa color GWAS 178 varieties AX-176817970 NA 15 105501269 0 0 0 1.37e-13 10.3389/fgene.2022.845602 NA NA t3818.T001456 4 Testa color GWAS 178 varieties AX-176817975 NA 11 143207486 0 0 0 1.56e-13 10.3389/fgene.2022.845602 NA NA t3818.T001457 4 Testa color GWAS 178 varieties AX-176809863 NA 15 58759541 0 0 0 1.94e-13 10.3389/fgene.2022.845602 NA NA t3818.T001458 4 Testa color GWAS 178 varieties AX-176794776 NA 15 124004453 0 0 0 1.94e-13 10.3389/fgene.2022.845602 NA NA t3818.T001459 4 Testa color GWAS 178 varieties AX-176809610 NA 15 53941411 0 0 0 2.01e-13 10.3389/fgene.2022.845602 NA NA t3818.T001460 4 Testa color GWAS 178 varieties AX-176807297 NA 15 55055103 0 0 0 2.01e-13 10.3389/fgene.2022.845602 NA NA t3818.T001461 4 Testa color GWAS 178 varieties AX-176807073 NA 15 37908675 0 0 0 2.36e-13 10.3389/fgene.2022.845602 NA NA t3818.T001462 4 Testa color GWAS 178 varieties AX-147226162 NA 16 143840951 0 0 0 2.43e-13 10.3389/fgene.2022.845602 NA NA t3818.T001463 4 Testa color GWAS 178 varieties AX-176795709 NA 16 143844378 0 0 0 2.69e-13 10.3389/fgene.2022.845602 NA NA t3818.T001464 4 Testa color GWAS 178 varieties AX-176796002 NA 16 149339786 0 0 0 3.11e-13 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NA NA t3818.T001579 4 Testa color GWAS 178 varieties AX-176794751 NA 15 105021983 0 0 0 8.85e-12 10.3389/fgene.2022.845602 NA NA t3818.T001580 4 Testa color GWAS 178 varieties AX-176810467 NA 15 121443160 0 0 0 9.15e-12 10.3389/fgene.2022.845602 NA NA t3818.T001581 4 Testa color GWAS 178 varieties AX-176808464 NA 15 40460574 0 0 0 9.33e-12 10.3389/fgene.2022.845602 NA NA t3818.T001582 4 Testa color GWAS 178 varieties AX-176810984 NA 15 123881534 0 0 0 9.37e-12 10.3389/fgene.2022.845602 NA NA t3818.T001583 4 Testa color GWAS 178 varieties AX-176800285 NA 15 10747972 0 0 0 1.05e-11 10.3389/fgene.2022.845602 NA NA t3818.T001584 4 Testa color GWAS 178 varieties AX-176799494 NA 15 35583789 0 0 0 1.07e-11 10.3389/fgene.2022.845602 NA NA t3818.T001585 4 Testa color GWAS 178 varieties AX-176808060 NA 16 8824402 0 0 0 1.12e-11 10.3389/fgene.2022.845602 NA NA t3818.T001586 4 Testa color GWAS 178 varieties AX-176794631 NA 16 154067276 0 0 0 1.15e-11 10.3389/fgene.2022.845602 NA NA t3818.T001587 4 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10.3389/fgene.2022.845602 NA NA t3818.T001661 4 Testa color GWAS 178 varieties AX-176818008 NA 15 34937979 0 0 0 7.58e-11 10.3389/fgene.2022.845602 NA NA t3818.T001662 4 Testa color GWAS 178 varieties AX-176791777 NA 18 117433853 0 0 0 7.82e-11 10.3389/fgene.2022.845602 NA NA t3818.T001663 4 Testa color GWAS 178 varieties AX-176812470 NA 16 11388033 0 0 0 8.7e-11 10.3389/fgene.2022.845602 NA NA t3818.T001664 4 Testa color GWAS 178 varieties AX-176808324 NA 15 18175197 0 0 0 9.75e-11 10.3389/fgene.2022.845602 NA NA t3818.T001665 4 Testa color GWAS 178 varieties AX-147230771 NA 18 10662792 0 0 0 1.41e-10 10.3389/fgene.2022.845602 NA NA t3818.T001666 4 Testa color GWAS 178 varieties AX-176804376 NA 11 133298074 0 0 0 1.44e-10 10.3389/fgene.2022.845602 NA NA t3818.T001667 4 Testa color GWAS 178 varieties AX-176802949 NA 15 151193019 0 0 0 1.49e-10 10.3389/fgene.2022.845602 NA NA t3818.T001668 4 Testa color GWAS 178 varieties AX-176812777 NA 15 35582220 0 0 0 2.02e-10 10.3389/fgene.2022.845602 NA NA t3818.T001669 4 Testa color GWAS 178 varieties AX-176805210 NA 16 151246128 0 0 0 2.06e-10 10.3389/fgene.2022.845602 NA NA t3818.T001670 4 Testa color GWAS 178 varieties AX-176816108 NA 15 13328655 0 0 0 2.07e-10 10.3389/fgene.2022.845602 NA NA t3818.T001671 4 Testa color GWAS 178 varieties AX-176817448 NA 15 33328199 0 0 0 2.12e-10 10.3389/fgene.2022.845602 NA NA t3818.T001672 4 Testa color GWAS 178 varieties AX-176805767 NA 11 136402641 0 0 0 2.55e-10 10.3389/fgene.2022.845602 NA NA t3818.T001673 4 Testa color GWAS 178 varieties AX-147235820 NA 20 79759742 0 0 0 2.56e-10 10.3389/fgene.2022.845602 NA NA t3818.T001674 4 Testa color GWAS 178 varieties AX-176794163 NA 15 33716416 0 0 0 2.89e-10 10.3389/fgene.2022.845602 NA NA t3818.T001675 4 Testa color GWAS 178 varieties AX-147247816 NA 16 143841027 0 0 0 2.92e-10 10.3389/fgene.2022.845602 NA NA t3818.T001676 4 Testa color GWAS 178 varieties AX-176791677 NA 15 4127475 0 0 0 3.06e-10 10.3389/fgene.2022.845602 NA NA t3818.T001677 4 Testa color GWAS 178 varieties AX-147249828 NA 15 33792954 0 0 0 3.29e-10 10.3389/fgene.2022.845602 NA NA t3818.T001678 4 Testa color GWAS 178 varieties AX-176808114 NA 15 33808410 0 0 0 3.52e-10 10.3389/fgene.2022.845602 NA NA t3818.T001679 4 Testa color GWAS 178 varieties AX-176819924 NA 16 11387963 0 0 0 4.31e-10 10.3389/fgene.2022.845602 NA NA t3818.T001680 4 Testa color GWAS 178 varieties AX-176818373 NA 15 37902627 0 0 0 4.71e-10 10.3389/fgene.2022.845602 NA NA t3818.T001681 4 Testa color GWAS 178 varieties AX-147230770 NA 18 10661988 0 0 0 4.89e-10 10.3389/fgene.2022.845602 NA NA t3818.T001682 4 Testa color GWAS 178 varieties AX-176800393 NA 15 34143175 0 0 0 4.99e-10 10.3389/fgene.2022.845602 NA NA t3818.T001683 4 Testa color GWAS 178 varieties AX-176811969 NA 11 136405014 0 0 0 5.35e-10 10.3389/fgene.2022.845602 NA NA t3818.T001684 4 Testa color GWAS 178 varieties AX-176800754 NA 16 10090036 0 0 0 5.93e-10 10.3389/fgene.2022.845602 NA NA t3818.T001685 4 Testa color GWAS 178 varieties AX-176814125 NA 15 37386255 0 0 0 6.06e-10 10.3389/fgene.2022.845602 NA NA t3818.T001686 4 Testa color GWAS 178 varieties AX-176793189 NA 15 37838501 0 0 0 7.93e-10 10.3389/fgene.2022.845602 NA NA t3818.T001687 4 Testa color GWAS 178 varieties AX-176815422 NA 18 132638638 0 0 0 1.01e-09 10.3389/fgene.2022.845602 NA NA t3818.T001688 4 Testa color GWAS 178 varieties AX-176808258 NA 15 36205348 0 0 0 1.09e-09 10.3389/fgene.2022.845602 NA NA t3818.T001689 4 Testa color GWAS 178 varieties AX-176796735 NA 15 34241184 0 0 0 1.13e-09 10.3389/fgene.2022.845602 NA NA t3818.T001690 4 Testa color GWAS 178 varieties AX-176791611 NA 15 38027729 0 0 0 1.27e-09 10.3389/fgene.2022.845602 NA NA t3818.T001691 4 Testa color GWAS 178 varieties AX-176803132 NA 15 34126109 0 0 0 1.37e-09 10.3389/fgene.2022.845602 NA NA t3818.T001692 4 Testa color GWAS 178 varieties AX-176807705 NA 15 39308920 0 0 0 1.5e-09 10.3389/fgene.2022.845602 NA NA t3818.T001693 4 Testa color GWAS 178 varieties AX-176812092 NA 15 17459709 0 0 0 1.58e-09 10.3389/fgene.2022.845602 NA NA t3818.T001694 4 Testa color GWAS 178 varieties AX-176817782 NA 16 148652653 0 0 0 1.62e-09 10.3389/fgene.2022.845602 NA NA t3818.T001695 4 Testa color GWAS 178 varieties AX-176811234 NA 15 13572756 0 0 0 1.68e-09 10.3389/fgene.2022.845602 NA NA t3818.T001696 4 Testa color GWAS 178 varieties AX-176809699 NA 15 15228659 0 0 0 1.68e-09 10.3389/fgene.2022.845602 NA NA t3818.T001697 4 Testa color GWAS 178 varieties AX-176817401 NA 15 24438490 0 0 0 1.68e-09 10.3389/fgene.2022.845602 NA NA t3818.T001698 4 Testa color GWAS 178 varieties AX-176797530 NA 15 24789530 0 0 0 1.68e-09 10.3389/fgene.2022.845602 NA NA t3818.T001699 4 Testa color GWAS 178 varieties AX-176796673 NA 15 122502038 0 0 0 1.89e-09 10.3389/fgene.2022.845602 NA NA t3818.T001700 4 Testa color GWAS 178 varieties AX-176803381 NA 10 91400099 0 0 0 1.94e-09 10.3389/fgene.2022.845602 NA NA t3818.T001701 4 Testa color GWAS 178 varieties AX-176811313 NA 15 26219384 0 0 0 1.94e-09 10.3389/fgene.2022.845602 NA NA t3818.T001702 4 Testa color GWAS 178 varieties AX-176806348 NA 15 36761760 0 0 0 1.98e-09 10.3389/fgene.2022.845602 NA NA t3818.T001703 4 Testa color GWAS 178 varieties AX-176817457 NA 15 43373691 0 0 0 2.21e-09 10.3389/fgene.2022.845602 NA NA t3818.T001704 4 Testa color GWAS 178 varieties AX-176800100 NA 11 145187696 0 0 0 2.37e-09 10.3389/fgene.2022.845602 NA NA t3818.T001705 4 Testa color GWAS 178 varieties AX-176812647 NA 16 144382405 0 0 0 2.83e-09 10.3389/fgene.2022.845602 NA NA t3818.T001706 4 Testa color GWAS 178 varieties AX-176802126 NA 6 105973788 0 0 0 3.34e-09 10.3389/fgene.2022.845602 NA NA t3818.T001707 4 Testa color GWAS 178 varieties AX-176792417 NA 13 13025251 0 0 0 3.34e-09 10.3389/fgene.2022.845602 NA NA t3818.T001708 4 Testa color GWAS 178 varieties AX-176816864 NA 13 32515553 0 0 0 3.34e-09 10.3389/fgene.2022.845602 NA NA t3818.T001709 4 Testa color GWAS 178 varieties AX-176792355 NA 13 33295784 0 0 0 3.34e-09 10.3389/fgene.2022.845602 NA NA t3818.T001710 4 Testa color GWAS 178 varieties AX-176811198 NA 16 12861071 0 0 0 3.34e-09 10.3389/fgene.2022.845602 NA NA t3818.T001711 4 Testa color GWAS 178 varieties AX-176794299 NA 16 12861141 0 0 0 3.34e-09 10.3389/fgene.2022.845602 NA NA t3818.T001712 4 Testa color GWAS 178 varieties AX-176817374 NA 15 17241971 0 0 0 3.46e-09 10.3389/fgene.2022.845602 NA NA t3818.T001713 4 Testa color GWAS 178 varieties AX-147234821 NA 9 119986761 0 0 0 3.5e-09 10.3389/fgene.2022.845602 NA NA t3818.T001714 4 Testa color GWAS 178 varieties AX-176799088 NA 15 157283402 0 0 0 3.53e-09 10.3389/fgene.2022.845602 NA NA t3818.T001715 4 Testa color GWAS 178 varieties AX-176812576 NA 11 140856685 0 0 0 3.79e-09 10.3389/fgene.2022.845602 NA NA t3818.T001716 4 Testa color GWAS 178 varieties AX-176807812 NA 11 140901109 0 0 0 3.79e-09 10.3389/fgene.2022.845602 NA NA t3818.T001717 4 Testa color GWAS 178 varieties AX-147257610 NA 8 33654558 0 0 0 4.07e-09 10.3389/fgene.2022.845602 NA NA t3818.T001718 4 Testa color GWAS 178 varieties AX-176801514 NA 16 2575302 0 0 0 4.28e-09 10.3389/fgene.2022.845602 NA NA t3818.T001719 4 Testa color GWAS 178 varieties AX-176805790 NA 15 37912954 0 0 0 4.43e-09 10.3389/fgene.2022.845602 NA NA t3818.T001720 4 Testa color GWAS 178 varieties AX-176805148 NA 13 30442840 0 0 0 4.95e-09 10.3389/fgene.2022.845602 NA NA t3818.T001721 4 Testa color GWAS 178 varieties AX-176792588 NA 15 35527938 0 0 0 4.99e-09 10.3389/fgene.2022.845602 NA NA t3818.T001722 4 Testa color GWAS 178 varieties AX-176803036 NA 10 67866662 0 0 0 5.2e-09 10.3389/fgene.2022.845602 NA NA t3818.T001723 4 Testa color GWAS 178 varieties AX-176800370 NA 11 134284390 0 0 0 5.63e-09 10.3389/fgene.2022.845602 NA NA t3818.T001724 4 Testa color GWAS 178 varieties AX-176823454 NA 15 38016681 0 0 0 6.08e-09 10.3389/fgene.2022.845602 NA NA t3818.T001725 4 Testa color GWAS 178 varieties AX-176795284 NA 15 34438558 0 0 0 6.8e-09 10.3389/fgene.2022.845602 NA NA t3818.T001726 4 Testa color GWAS 178 varieties AX-176819858 NA 16 1772985 0 0 0 7.13e-09 10.3389/fgene.2022.845602 NA NA t3818.T001727 4 Testa color GWAS 178 varieties AX-177642664 NA 20 89486712 0 0 0 7.3e-09 10.3389/fgene.2022.845602 NA NA t3818.T001728 4 Testa color GWAS 178 varieties AX-176800924 NA 11 133498810 0 0 0 7.56e-09 10.3389/fgene.2022.845602 NA NA t3818.T001729 4 Testa color GWAS 178 varieties AX-176813050 NA 15 33728012 0 0 0 7.98e-09 10.3389/fgene.2022.845602 NA NA t3818.T001730 4 Testa color GWAS 178 varieties AX-176819968 NA 11 136402571 0 0 0 8.5e-09 10.3389/fgene.2022.845602 NA NA t3818.T001731 4 Testa color GWAS 178 varieties AX-176800986 NA 15 116058915 0 0 0 8.96e-09 10.3389/fgene.2022.845602 NA NA t3818.T001732 4 Testa color GWAS 178 varieties AX-176818048 NA 15 36900351 0 0 0 9.13e-09 10.3389/fgene.2022.845602 NA NA t3818.T001733 4 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10.3389/fgene.2022.845602 NA NA t3818.T001807 4 Testa color GWAS 178 varieties AX-176799491 NA 8 6738660 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001808 4 Testa color GWAS 178 varieties AX-147245305 NA 13 131260229 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001809 4 Testa color GWAS 178 varieties AX-147248074 NA 14 121709205 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001810 4 Testa color GWAS 178 varieties AX-147248084 NA 14 121959863 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001811 4 Testa color GWAS 178 varieties AX-147220529 NA 14 121964909 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001812 4 Testa color GWAS 178 varieties AX-147248091 NA 14 122085850 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001813 4 Testa color GWAS 178 varieties AX-147220544 NA 14 122445259 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001814 4 Testa color GWAS 178 varieties AX-147220591 NA 14 124832478 0 0 0 3.22e-08 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10.3389/fgene.2022.845602 NA NA t3818.T001823 4 Testa color GWAS 178 varieties AX-147220687 NA 14 127689789 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001824 4 Testa color GWAS 178 varieties AX-147248329 NA 14 131109946 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001825 4 Testa color GWAS 178 varieties AX-176820245 NA 14 131125241 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001826 4 Testa color GWAS 178 varieties AX-147248368 NA 14 132978168 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001827 4 Testa color GWAS 178 varieties AX-147220840 NA 14 133390769 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001828 4 Testa color GWAS 178 varieties AX-147220846 NA 14 133403963 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001829 4 Testa color GWAS 178 varieties AX-147220849 NA 14 133540104 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001830 4 Testa color GWAS 178 varieties AX-147248417 NA 14 133966290 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001831 4 Testa color GWAS 178 varieties AX-176791631 NA 14 134070320 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001832 4 Testa color GWAS 178 varieties AX-147220890 NA 14 134201488 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001833 4 Testa color GWAS 178 varieties AX-147220907 NA 14 134628790 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001834 4 Testa color GWAS 178 varieties AX-147220908 NA 14 134628865 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001835 4 Testa color GWAS 178 varieties AX-147220920 NA 14 135022773 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001836 4 Testa color GWAS 178 varieties AX-147220957 NA 14 135691868 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001837 4 Testa color GWAS 178 varieties AX-147220959 NA 14 135692863 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001838 4 Testa color GWAS 178 varieties AX-147248495 NA 14 135857244 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001839 4 Testa color GWAS 178 varieties AX-147248527 NA 14 136277665 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001840 4 Testa color GWAS 178 varieties AX-147248530 NA 14 136404192 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001841 4 Testa color GWAS 178 varieties AX-147221009 NA 14 137122912 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001842 4 Testa color GWAS 178 varieties AX-147221016 NA 14 137204149 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001843 4 Testa color GWAS 178 varieties AX-147221071 NA 14 137793971 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001844 4 Testa color GWAS 178 varieties AX-147248598 NA 14 137795936 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001845 4 Testa color GWAS 178 varieties AX-176791513 NA 14 138335717 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001846 4 Testa color GWAS 178 varieties AX-147221111 NA 14 138483073 0 0 0 3.22e-08 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10.3389/fgene.2022.845602 NA NA t3818.T001855 4 Testa color GWAS 178 varieties AX-176813578 NA 15 151797329 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001856 4 Testa color GWAS 178 varieties AX-176811780 NA 15 151797424 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001857 4 Testa color GWAS 178 varieties AX-176797187 NA 16 9352292 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001858 4 Testa color GWAS 178 varieties AX-176812452 NA 16 10139395 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001859 4 Testa color GWAS 178 varieties AX-176792356 NA 16 11135696 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001860 4 Testa color GWAS 178 varieties AX-176819706 NA 16 11369117 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001861 4 Testa color GWAS 178 varieties AX-176794968 NA 16 11598198 0 0 0 3.22e-08 10.3389/fgene.2022.845602 NA NA t3818.T001862 4 Testa color GWAS 178 varieties AX-176817422 NA 16 12975421 0 0 0 3.22e-08 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NA NA t3818.T001943 4 Testa color GWAS 178 varieties AX-176817171 NA 4 119905388 0 0 0 1.37e-07 10.3389/fgene.2022.845602 NA NA t3818.T001944 4 Testa color GWAS 178 varieties AX-176820108 NA 15 132956372 0 0 0 1.37e-07 10.3389/fgene.2022.845602 NA NA t3818.T001945 4 Testa color GWAS 178 varieties AX-176816405 NA 11 46830350 0 0 0 1.39e-07 10.3389/fgene.2022.845602 NA NA t3818.T001946 4 Testa color GWAS 178 varieties AX-176817380 NA 15 18518474 0 0 0 1.47e-07 10.3389/fgene.2022.845602 NA NA t3818.T001947 4 Testa color GWAS 178 varieties AX-176795835 NA 8 8465816 0 0 0 1.51e-07 10.3389/fgene.2022.845602 NA NA t3818.T001948 4 Testa color GWAS 178 varieties AX-147240701 NA 12 8323889 0 0 0 1.56e-07 10.3389/fgene.2022.845602 NA NA t3818.T001949 4 Testa color GWAS 178 varieties AX-176817341 NA 5 9231330 0 0 0 1.58e-07 10.3389/fgene.2022.845602 NA NA t3818.T001950 4 Testa color GWAS 178 varieties AX-176795984 NA 15 145286981 0 0 0 1.68e-07 10.3389/fgene.2022.845602 NA NA t3818.T001951 4 Testa 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varieties AX-176797250 NA 15 7802608 0 0 0 2.3e-07 10.3389/fgene.2022.845602 NA NA t3818.T001960 4 Testa color GWAS 178 varieties AX-176804679 NA 15 9448111 0 0 0 2.3e-07 10.3389/fgene.2022.845602 NA NA t3818.T001961 4 Testa color GWAS 178 varieties AX-176795952 NA 15 145653696 0 0 0 2.3e-07 10.3389/fgene.2022.845602 NA NA t3818.T001962 4 Testa color GWAS 178 varieties AX-176811759 NA 15 148817093 0 0 0 2.3e-07 10.3389/fgene.2022.845602 NA NA t3818.T001963 4 Testa color GWAS 178 varieties AX-176802235 NA 15 157646119 0 0 0 2.3e-07 10.3389/fgene.2022.845602 NA NA t3818.T001964 4 Testa color GWAS 178 varieties AX-176803441 NA 15 152633308 0 0 0 2.32e-07 10.3389/fgene.2022.845602 NA NA t3818.T001965 4 Testa color GWAS 178 varieties AX-176808804 NA 11 33357857 0 0 0 2.33e-07 10.3389/fgene.2022.845602 NA NA t3818.T001966 4 Testa color GWAS 178 varieties AX-176803906 NA 15 38321710 0 0 0 2.35e-07 10.3389/fgene.2022.845602 NA NA t3818.T001967 4 Testa color GWAS 178 varieties AX-176792131 NA 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10.3389/fgene.2022.845602 NA NA t3818.T001984 4 Testa color GWAS 178 varieties AX-147248562 NA 14 137173856 0 0 0 2.43e-07 10.3389/fgene.2022.845602 NA NA t3818.T001985 4 Testa color GWAS 178 varieties AX-147221108 NA 14 138458887 0 0 0 2.43e-07 10.3389/fgene.2022.845602 NA NA t3818.T001986 4 Testa color GWAS 178 varieties AX-176802834 NA 4 111426992 0 0 0 2.43e-07 10.3389/fgene.2022.845602 NA NA t3818.T001987 4 Testa color GWAS 178 varieties AX-176818266 NA 15 152633238 0 0 0 2.44e-07 10.3389/fgene.2022.845602 NA NA t3818.T001988 4 Testa color GWAS 178 varieties AX-176807546 NA 15 38374568 0 0 0 2.5e-07 10.3389/fgene.2022.845602 NA NA t3818.T001989 4 Testa color GWAS 178 varieties AX-176803379 NA 15 157705298 0 0 0 2.51e-07 10.3389/fgene.2022.845602 NA NA t3818.T001990 4 Testa color GWAS 178 varieties AX-177640121 NA 18 114790887 0 0 0 2.61e-07 10.3389/fgene.2022.845602 NA NA t3818.T001991 4 Testa color GWAS 178 varieties AX-147248424 NA 4 120072718 0 0 0 2.64e-07 10.3389/fgene.2022.845602 NA NA t3818.T001992 4 Testa color GWAS 178 varieties AX-176813734 NA 15 39114583 0 0 0 2.67e-07 10.3389/fgene.2022.845602 NA NA t3818.T001993 4 Testa color GWAS 178 varieties AX-176812149 NA 15 34126017 0 0 0 2.71e-07 10.3389/fgene.2022.845602 NA NA t3818.T001994 4 Testa color GWAS 178 varieties AX-177639727 NA 18 131238221 0 0 0 2.8e-07 10.3389/fgene.2022.845602 NA NA t3818.T001995 4 Testa color GWAS 178 varieties AX-176810343 NA 15 18242615 0 0 0 2.85e-07 10.3389/fgene.2022.845602 NA NA t3818.T001996 4 Testa color GWAS 178 varieties AX-176792521 NA 13 33214474 0 0 0 2.87e-07 10.3389/fgene.2022.845602 NA NA t3818.T001997 4 Testa color GWAS 178 varieties AX-147221200 NA 14 139398407 0 0 0 2.9e-07 10.3389/fgene.2022.845602 NA NA t3818.T001998 4 Testa color GWAS 178 varieties AX-147248739 NA 14 139897729 0 0 0 2.9e-07 10.3389/fgene.2022.845602 NA NA t3818.T001999 4 Testa color GWAS 178 varieties AX-176792552 NA 16 144385654 0 0 0 2.92e-07 10.3389/fgene.2022.845602 NA NA t3818.T002000 4 Testa color GWAS 178 varieties AX-176814784 NA 15 8437518 0 0 0 2.92e-07 10.3389/fgene.2022.845602 NA NA t3818.T002001 4 Testa color GWAS 178 varieties AX-176817756 NA 15 37188382 0 0 0 3.04e-07 10.3389/fgene.2022.845602 NA NA t3818.T002002 4 Testa color GWAS 178 varieties AX-176807844 NA 10 75468222 0 0 0 3.08e-07 10.3389/fgene.2022.845602 NA NA t3818.T002003 4 Testa color GWAS 178 varieties AX-176820541 NA 10 69215384 0 0 0 3.1e-07 10.3389/fgene.2022.845602 NA NA t3818.T002004 4 Testa color GWAS 178 varieties AX-176804531 NA 11 127504744 0 0 0 3.12e-07 10.3389/fgene.2022.845602 NA NA t3818.T002005 4 Testa color GWAS 178 varieties AX-177638665 NA 10 75024809 0 0 0 3.21e-07 10.3389/fgene.2022.845602 NA NA t3818.T002006 4 Testa color GWAS 178 varieties AX-177639963 NA 10 17980428 0 0 0 3.45e-07 10.3389/fgene.2022.845602 NA NA t3818.T002007 4 Testa color GWAS 178 varieties AX-177637923 NA 10 20748255 0 0 0 3.49e-07 10.3389/fgene.2022.845602 NA NA t3818.T002008 4 Testa color GWAS 178 varieties AX-176812228 NA 11 30190415 0 0 0 3.6e-07 10.3389/fgene.2022.845602 NA NA t3818.T002009 4 Testa color GWAS 178 varieties AX-176810829 NA 11 29075459 0 0 0 3.63e-07 10.3389/fgene.2022.845602 NA NA t3818.T002010 4 Testa color GWAS 178 varieties AX-176793697 NA 11 29657630 0 0 0 3.63e-07 10.3389/fgene.2022.845602 NA NA t3818.T002011 4 Testa color GWAS 178 varieties AX-176816362 NA 11 30852335 0 0 0 3.63e-07 10.3389/fgene.2022.845602 NA NA t3818.T002012 4 Testa color GWAS 178 varieties AX-176816378 NA 11 34603654 0 0 0 3.63e-07 10.3389/fgene.2022.845602 NA NA t3818.T002013 4 Testa color GWAS 178 varieties AX-176818704 NA 11 37245954 0 0 0 3.63e-07 10.3389/fgene.2022.845602 NA NA t3818.T002014 4 Testa color GWAS 178 varieties AX-176797983 NA 11 40208536 0 0 0 3.63e-07 10.3389/fgene.2022.845602 NA NA t3818.T002015 4 Testa color GWAS 178 varieties AX-176794617 NA 11 40211962 0 0 0 3.63e-07 10.3389/fgene.2022.845602 NA NA t3818.T002016 4 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10.3389/fgene.2022.845602 NA NA t3818.T002122 4 Testa color GWAS 178 varieties AX-177639349 NA 10 90813817 0 0 0 2.03e-06 10.3389/fgene.2022.845602 NA NA t3818.T002123 4 Testa color GWAS 178 varieties AX-177639140 NA 10 52939078 0 0 0 2.05e-06 10.3389/fgene.2022.845602 NA NA t3818.T002124 4 Testa color GWAS 178 varieties AX-177638008 NA 10 36478594 0 0 0 2.05e-06 10.3389/fgene.2022.845602 NA NA t3818.T002125 4 Testa color GWAS 178 varieties AX-177640118 NA 18 117137434 0 0 0 2.1e-06 10.3389/fgene.2022.845602 NA NA t3818.T002126 4 Testa color GWAS 178 varieties AX-147222389 NA 15 38323200 0 0 0 2.16e-06 10.3389/fgene.2022.845602 NA NA t3818.T002127 4 Testa color GWAS 178 varieties AX-176821967 NA 18 120947496 0 0 0 2.24e-06 10.3389/fgene.2022.845602 NA NA t3818.T002128 4 Testa color GWAS 178 varieties AX-176809247 NA 4 112522620 0 0 0 2.36e-06 10.3389/fgene.2022.845602 NA NA t3818.T002129 4 Testa color GWAS 178 varieties AX-147221639 NA 18 123357988 0 0 0 2.43e-06 10.3389/fgene.2022.845602 NA NA t3818.T002130 4 Testa color GWAS 178 varieties AX-147248227 NA 4 114731941 0 0 0 2.43e-06 10.3389/fgene.2022.845602 NA NA t3818.T002131 4 Testa color GWAS 178 varieties AX-176791630 NA 4 118428872 0 0 0 2.43e-06 10.3389/fgene.2022.845602 NA NA t3818.T002132 4 Testa color GWAS 178 varieties AX-147220797 NA 4 118511417 0 0 0 2.43e-06 10.3389/fgene.2022.845602 NA NA t3818.T002133 4 Testa color GWAS 178 varieties AX-147220839 NA 4 119355124 0 0 0 2.43e-06 10.3389/fgene.2022.845602 NA NA t3818.T002134 4 Testa color GWAS 178 varieties AX-147248556 NA 4 122731649 0 0 0 2.43e-06 10.3389/fgene.2022.845602 NA NA t3818.T002135 4 Testa color GWAS 178 varieties AX-147247515 NA 14 122600698 0 0 0 2.43e-06 10.3389/fgene.2022.845602 NA NA t3818.T002136 4 Testa color GWAS 178 varieties AX-176821228 NA 14 123059497 0 0 0 2.43e-06 10.3389/fgene.2022.845602 NA NA t3818.T002137 4 Testa color GWAS 178 varieties AX-147220773 NA 14 130877661 0 0 0 2.43e-06 10.3389/fgene.2022.845602 NA NA t3818.T002138 4 Testa color GWAS 178 varieties AX-147220804 NA 14 132351481 0 0 0 2.43e-06 10.3389/fgene.2022.845602 NA NA t3818.T002139 4 Testa color GWAS 178 varieties AX-147248467 NA 14 135015210 0 0 0 2.43e-06 10.3389/fgene.2022.845602 NA NA t3818.T002140 4 Testa color GWAS 178 varieties AX-147220960 NA 14 135721079 0 0 0 2.43e-06 10.3389/fgene.2022.845602 NA NA t3818.T002141 4 Testa color GWAS 178 varieties AX-147220962 NA 14 135759508 0 0 0 2.43e-06 10.3389/fgene.2022.845602 NA NA t3818.T002142 4 Testa color GWAS 178 varieties AX-147248490 NA 14 135772924 0 0 0 2.43e-06 10.3389/fgene.2022.845602 NA NA t3818.T002143 4 Testa color GWAS 178 varieties AX-147220973 NA 14 135977873 0 0 0 2.43e-06 10.3389/fgene.2022.845602 NA NA t3818.T002144 4 Testa color GWAS 178 varieties AX-147221175 NA 14 139185256 0 0 0 2.43e-06 10.3389/fgene.2022.845602 NA NA t3818.T002145 4 Testa color GWAS 178 varieties AX-177639639 NA 10 78015259 0 0 0 2.55e-06 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10.3389/fgene.2022.845602 NA NA t3818.T002154 4 Testa color GWAS 178 varieties AX-176819938 NA 15 18519742 0 0 0 2.88e-06 10.3389/fgene.2022.845602 NA NA t3818.T002155 4 Testa color GWAS 178 varieties AX-176797266 NA 17 36689575 0 0 0 2.9e-06 10.3389/fgene.2022.845602 NA NA t3818.T002156 4 Testa color GWAS 178 varieties AX-176802136 NA 15 151121143 0 0 0 2.9e-06 10.3389/fgene.2022.845602 NA NA t3818.T002157 4 Testa color GWAS 178 varieties AX-176822082 NA 10 54099378 0 0 0 2.92e-06 10.3389/fgene.2022.845602 NA NA t3818.T002158 4 Testa color GWAS 178 varieties AX-176811016 NA 11 19905568 0 0 0 2.97e-06 10.3389/fgene.2022.845602 NA NA t3818.T002159 4 Testa color GWAS 178 varieties AX-147238207 NA 11 19949544 0 0 0 2.97e-06 10.3389/fgene.2022.845602 NA NA t3818.T002160 4 Testa color GWAS 178 varieties AX-176816338 NA 11 20862958 0 0 0 2.97e-06 10.3389/fgene.2022.845602 NA NA t3818.T002161 4 Testa color GWAS 178 varieties AX-147249643 NA 15 24129736 0 0 0 3.01e-06 10.3389/fgene.2022.845602 NA NA t3818.T002162 4 Testa color GWAS 178 varieties AX-176796740 NA 11 118719711 0 0 0 3.03e-06 10.3389/fgene.2022.845602 NA NA t3818.T002163 4 Testa color GWAS 178 varieties AX-176810751 NA 11 129663940 0 0 0 3.03e-06 10.3389/fgene.2022.845602 NA NA t3818.T002164 4 Testa color GWAS 178 varieties AX-147226344 NA 16 147347913 0 0 0 3.1e-06 10.3389/fgene.2022.845602 NA NA t3818.T002165 4 Testa color GWAS 178 varieties AX-176793739 NA 15 154150412 0 0 0 3.14e-06 10.3389/fgene.2022.845602 NA NA t3818.T002166 4 Testa color GWAS 178 varieties AX-176800064 NA 15 36204754 0 0 0 3.22e-06 10.3389/fgene.2022.845602 NA NA t3818.T002167 4 Testa color GWAS 178 varieties AX-176812213 NA 11 21769412 0 0 0 3.24e-06 10.3389/fgene.2022.845602 NA NA t3818.T002168 4 Testa color GWAS 178 varieties AX-176798822 NA 11 51928001 0 0 0 3.24e-06 10.3389/fgene.2022.845602 NA NA t3818.T002169 4 Testa color GWAS 178 varieties AX-177640183 NA 17 126576875 0 0 0 3.27e-06 10.3389/fgene.2022.845602 NA NA t3818.T002170 4 Testa color GWAS 178 varieties AX-176822103 NA 15 129701489 0 0 0 3.32e-06 10.3389/fgene.2022.845602 NA NA t3818.T002171 4 Testa color GWAS 178 varieties AX-147248587 NA 14 137720730 0 0 0 3.42e-06 10.3389/fgene.2022.845602 NA NA t3818.T002172 4 Testa color GWAS 178 varieties AX-147248627 NA 14 138254016 0 0 0 3.43e-06 10.3389/fgene.2022.845602 NA NA t3818.T002173 4 Testa color GWAS 178 varieties AX-176823888 NA 10 7704338 0 0 0 3.49e-06 10.3389/fgene.2022.845602 NA NA t3818.T002174 4 Testa color GWAS 178 varieties AX-177639675 NA 10 87851670 0 0 0 3.56e-06 10.3389/fgene.2022.845602 NA NA t3818.T002175 4 Testa color GWAS 178 varieties AX-176809085 NA 17 107310085 0 0 0 3.58e-06 10.3389/fgene.2022.845602 NA NA t3818.T002176 4 Testa color GWAS 178 varieties AX-176799781 NA 11 21436709 0 0 0 3.61e-06 10.3389/fgene.2022.845602 NA NA t3818.T002177 4 Testa color GWAS 178 varieties AX-176822617 NA 15 36799465 0 0 0 3.8e-06 10.3389/fgene.2022.845602 NA NA t3818.T002178 4 Testa color GWAS 178 varieties AX-147221130 NA 14 138960972 0 0 0 3.83e-06 10.3389/fgene.2022.845602 NA NA t3818.T002179 4 Testa color GWAS 178 varieties AX-176821061 NA 17 31738704 0 0 0 3.9e-06 10.3389/fgene.2022.845602 NA NA t3818.T002180 4 Testa color GWAS 178 varieties AX-177637641 NA 17 31972847 0 0 0 3.9e-06 10.3389/fgene.2022.845602 NA NA t3818.T002181 3 Total number of branches GWAS 178 varieties AX-176814320 NA 5 98904713 0 0 0 1.27e-08 10.3389/fgene.2022.845602 NA NA t3818.T002182 3 Total number of branches GWAS 178 varieties AX-176804877 NA 5 98183397 0 0 0 1.7e-08 10.3389/fgene.2022.845602 NA NA t3818.T002183 3 Total number of branches GWAS 178 varieties AX-176814320 NA 5 98904713 0 0 0 1.27e-07 10.3389/fgene.2022.845602 NA NA t3818.T002184 3 Total number of branches GWAS 178 varieties AX-176814320 NA 5 97904713 0 0 0 2.27e-07 10.3389/fgene.2022.845602 NA NA t3818.T002185 3 Total number of branches GWAS 178 varieties AX-176804877 NA 5 97183397 0 0 0 1.7e-06 10.3389/fgene.2022.845602 NA NA t3818.T002186 3 Total number of branches GWAS 178 varieties AX-176798839 NA 5 97843464 0 0 0 2.92e-06 10.3389/fgene.2022.845602 NA NA t3818.T002187 3 Total number of branches GWAS 178 varieties AX-176817253 NA 5 98410409 0 0 0 2.92e-06 10.3389/fgene.2022.845602 NA NA t3818.T002188 3 Total number of branches GWAS 178 varieties AX-176809506 NA 5 98922033 0 0 0 2.92e-06 10.3389/fgene.2022.845602 NA NA t3818.T002189 3 Total number of branches GWAS 178 varieties AX-176800909 NA 5 98975592 0 0 0 2.92e-06 10.3389/fgene.2022.845602 NA NA t3818.T002190 1 Testa oil spots GWAS 178 varieties AX-176798776 NA 5 112166415 0 0 0 6.36e-08 10.3389/fgene.2022.845602 NA NA t3818.T002191 1 Testa oil spots GWAS 178 varieties AX-176809615 NA 5 115818259 0 0 0 7.39e-08 10.3389/fgene.2022.845602 NA NA t3818.T002192 1 Testa oil spots GWAS 178 varieties AX-147223822 NA 5 112516286 0 0 0 3.46e-07 10.3389/fgene.2022.845602 NA NA t3818.T002193 1 Testa oil spots GWAS 178 varieties AX-176810475 NA 5 114022508 0 0 0 1.04e-06 10.3389/fgene.2022.845602 NA NA t3818.T002194 1 Testa oil spots GWAS 178 varieties AX-176810022 NA 5 111936057 0 0 0 1.99e-06 10.3389/fgene.2022.845602 NA NA t3818.T002195 1 Testa oil spots GWAS 178 varieties AX-176806854 NA 5 114965471 0 0 0 3.06e-06 10.3389/fgene.2022.845602 NA NA