t3726.T000001 qFW1 1 Fusarium wilt resistance QTL analysis 835 x B2 F2 nu_mBRPGM1376 NA NA 0 0 nu_mBRPGM1211 NA 0 0 3.72 10.1007/s00122-013-2154-1 NA NA t3726.T000002 qFW1 1 Fusarium wilt resistance QTL analysis 835 x B2 F2 ACMP0606 NA NA 0 0 cnu_mBRPGM0085 NA 0 0 4.34 10.1007/s00122-013-2154-1 NA NA t3726.T000003 qFW1 1 Fusarium wilt resistance QTL analysis 835 x B2 F2 nu_mBRPGM1208 NA NA 0 0 At4g31 NA 0 0 9.42 10.1007/s00122-013-2154-1 NA NA t3726.T000004 qFW1 1 Fusarium wilt resistance QTL analysis 835 x B2 F2 ACMP0357 NA NA 0 0 cnu_mBRPGM0701 NA 0 0 10.08 10.1007/s00122-013-2154-1 NA NA t3726.T000005 qFW1 1 Fusarium wilt resistance QTL analysis 835 x B2 F2 nia032a NA NA 0 0 cnu_mBRPGM1542 NA 0 0 3.31 10.1007/s00122-013-2154-1 NA NA t3726.T000006 qFW2 1 Fusarium wilt resistance QTL analysis 835 x B2 F2 nu_mBRPGM1376 NA NA 0 0 nu_mBRPGM1211 NA 0 0 3.29 10.1007/s00122-013-2154-1 NA NA t3726.T000007 qFW3 1 Fusarium wilt resistance QTL analysis 835 x B2 F2 ACMP0590 NA NA 0 0 cnu_mBRPGM0674 NA 0 0 5.62 10.1007/s00122-013-2154-1 NA NA t3726.T000008 qFW4 1 Fusarium wilt resistance QTL analysis 835 x B2 F2 nu_mBRPGM0432 NA NA 0 0 RSS3562 NA 0 0 3.76 10.1007/s00122-013-2154-1 NA NA t3726.T000009 qFW5 1 Fusarium wilt resistance QTL analysis 835 x B2 F2 nu_mBRPGM0432 NA NA 0 0 RSS3562 NA 0 0 4.84 10.1007/s00122-013-2154-1 NA NA t3726.T000010 qFW6 1 Fusarium wilt resistance QTL analysis 835 x B2 F2 nu_mBRPGM0432 NA NA 0 0 RSS3562 NA 0 0 4.23 10.1007/s00122-013-2154-1 NA NA t3726.T000011 qFW7 1 Fusarium wilt resistance QTL analysis 835 x B2 F2 ACMP0606 NA NA 0 0 cnu_mBRPGM0085 NA 0 0 7.94 10.1007/s00122-013-2154-1 NA NA t3726.T000012 qFW8 1 Fusarium wilt resistance QTL analysis 835 x B2 F2 ACMP0606 NA NA 0 0 cnu_mBRPGM0085 NA 0 0 8.84 10.1007/s00122-013-2154-1 NA NA t3726.T000013 4 Root shape (length/width) QTL analysis Huang-he hong wan x Utsugi-gensuke F2 BRMS-303-2 NA NA 0 0 AAC/CTG6 NA 0 0 39.7 2.42 10.1270/jsbbs.58.55 NA NA t3726.T000014 4 Thickening QTL analysis Huang-he hong wan x Utsugi-gensuke F2 ACA/CTT5 NA NA 0 0 NA 0 0 77.6 3.03 10.1270/jsbbs.58.55 NA NA t3726.T000015 4 Thickening QTL analysis Huang-he hong wan x Utsugi-gensuke F2 AAG/CTA12 NA NA 0 0 ACT/CTT8 NA 0 0 86 4.51 10.1270/jsbbs.58.55 NA NA t3726.T000016 4 Root shape (length/width) QTL analysis Huang-he hong wan x Utsugi-gensuke F2 ACA/CTG5 NA NA 0 0 ACC/CTA6 NA 0 0 45.4 2.88 10.1270/jsbbs.58.55 NA NA t3726.T000017 4 Red pigmentation QTL analysis Huang-he hong wan x Utsugi-gensuke F2 SLG NA NA 0 0 AAG/CAG10 NA 0 0 29.1 9.58 10.1270/jsbbs.58.55 NA NA t3726.T000017 5 Red pigmentation QTL analysis Huang-he hong wan x Utsugi-gensuke F2 SLG NA NA 0 0 AAG/CAG10 NA 0 0 29.1 9.58 10.1270/jsbbs.58.55 NA NA t3726.T000018 1 CR (clubroot resistance), Crs1 (clubroot resistance locus of Raphanus sativus 1) QTL analysis Koga-benimaru x Utsugi-gensuke F2 BN142 NA NA 0 0 NA 0 0 7 12.64 10.1007/s00122-009-1230-z t3726.M005070.1 NA t3726.T000019 qRCd1 1 RCd (mg kg-1), root Cd concentration QTL analysis Nau-Dysx x Nau-Yh F2 Ni2E05_525 NA NA 0 0 NA 0 0 114.6 5.24 10.1007/s00122-012-1858-y NA NA t3726.T000019 qRCd1 5 RCd (mg kg-1), root Cd concentration QTL analysis Nau-Dysx x Nau-Yh F2 Ni2E05_525 NA NA 0 0 NA 0 0 114.6 5.24 10.1007/s00122-012-1858-y NA NA t3726.T000020 qRCd4 1 RCd (mg kg-1), root Cd concentration QTL analysis Nau-Dysx x Nau-Yh F2 BRMS129_510 NA NA 0 0 NA 0 0 6.9 4.36 10.1007/s00122-012-1858-y NA NA t3726.T000020 qRCd4 5 RCd (mg kg-1), root Cd concentration QTL analysis Nau-Dysx x Nau-Yh F2 BRMS129_510 NA NA 0 0 NA 0 0 6.9 4.36 10.1007/s00122-012-1858-y NA NA t3726.T000021 qRCd6 1 RCd (mg kg-1), root Cd concentration QTL analysis Nau-Dysx x Nau-Yh F2 EM6fc3_331 NA NA 0 0 NA 0 0 101.9 5.28 10.1007/s00122-012-1858-y NA NA t3726.T000021 qRCd6 5 RCd (mg kg-1), root Cd concentration QTL analysis Nau-Dysx x Nau-Yh F2 EM6fc3_331 NA NA 0 0 NA 0 0 101.9 5.28 10.1007/s00122-012-1858-y NA NA t3726.T000022 qRCd9 1 RCd (mg kg-1), root Cd concentration QTL analysis Nau-Dysx x Nau-Yh F2 EM5me6_286 NA NA 0 0 NA 0 0 95.3 23.64 10.1007/s00122-012-1858-y NA NA t3726.T000022 qRCd9 5 RCd (mg kg-1), root Cd concentration QTL analysis Nau-Dysx x Nau-Yh F2 EM5me6_286 NA NA 0 0 NA 0 0 95.3 23.64 10.1007/s00122-012-1858-y NA NA t3726.T000023 qRDW5 4 RDW (g), root dry weight QTL analysis Nau-Dysx x Nau-Yh F2 BRMS058_550 NA NA 0 0 NA 0 0 124.3 7.28 10.1007/s00122-012-1858-y NA NA t3726.T000024 qRDW6 4 RDW (g), root dry weight QTL analysis Nau-Dysx x Nau-Yh F2 NAUrp705_644 NA NA 0 0 NA 0 0 30.1 3.96 10.1007/s00122-012-1858-y NA NA t3726.T000025 qRDW9 4 RDW (g), root dry weight QTL analysis Nau-Dysx x Nau-Yh F2 EM3me6_291 NA NA 0 0 NA 0 0 148.5 3.58 10.1007/s00122-012-1858-y NA NA t3726.T000026 qRL1 4 RL (cm), root length QTL analysis Nau-Dysx x Nau-Yh F2 Na10F06_545 NA NA 0 0 NA 0 0 17.3 3.38 10.1007/s00122-012-1858-y NA NA t3726.T000027 qRL3.1 4 RL (cm), root length QTL analysis Nau-Dysx x Nau-Yh F2 RamRM24-568_618 NA NA 0 0 NA 0 0 124.7 3.26 10.1007/s00122-012-1858-y NA NA t3726.T000028 qRL3.2 4 RL (cm), root length QTL analysis Nau-Dysx x Nau-Yh F2 PM2fc8_314 NA NA 0 0 NA 0 0 135.3 3.64 10.1007/s00122-012-1858-y NA NA t3726.T000029 qRL5 4 RL (cm), root length QTL analysis Nau-Dysx x Nau-Yh F2 NAUrp782_643 NA NA 0 0 NA 0 0 25 4.89 10.1007/s00122-012-1858-y NA NA t3726.T000030 qRL7 4 RL (cm), root length QTL analysis Nau-Dysx x Nau-Yh F2 EM4odd48_365 NA NA 0 0 NA 0 0 179.7 4.06 10.1007/s00122-012-1858-y NA NA t3726.T000031 qSCd1 1 SCd (mg kg-1), shoot Cd concentration QTL analysis Nau-Dysx x Nau-Yh F2 NAUrp362_706 NA NA 0 0 NA 0 0 156.5 4.37 10.1007/s00122-012-1858-y NA NA t3726.T000031 qSCd1 5 SCd (mg kg-1), shoot Cd concentration QTL analysis Nau-Dysx x Nau-Yh F2 NAUrp362_706 NA NA 0 0 NA 0 0 156.5 4.37 10.1007/s00122-012-1858-y NA NA t3726.T000032 qSCd3 1 SCd (mg kg-1), shoot Cd concentration QTL analysis Nau-Dysx x Nau-Yh F2 EM16ga18_383 NA NA 0 0 NA 0 0 57.4 7.64 10.1007/s00122-012-1858-y NA NA t3726.T000032 qSCd3 5 SCd (mg kg-1), shoot Cd concentration QTL analysis Nau-Dysx x Nau-Yh F2 EM16ga18_383 NA NA 0 0 NA 0 0 57.4 7.64 10.1007/s00122-012-1858-y NA NA t3726.T000033 qSDW2 4 SDW (g), shoot dry weight QTL analysis Nau-Dysx x Nau-Yh F2 NAUJKC19_565 NA NA 0 0 NA 0 0 84.6 4.74 10.1007/s00122-012-1858-y NA NA t3726.T000034 qSDW6 4 SDW (g), shoot dry weight QTL analysis Nau-Dysx x Nau-Yh F2 Na10F08_665 NA NA 0 0 NA 0 0 127.4 3.78 10.1007/s00122-012-1858-y NA NA t3726.T000035 qSDW9 4 SDW (g), shoot dry weight QTL analysis Nau-Dysx x Nau-Yh F2 Ol14E06_720 NA NA 0 0 NA 0 0 21.8 4.62 10.1007/s00122-012-1858-y NA NA t3726.T000036 qSH2 4 SH (cm), shoot height QTL analysis Nau-Dysx x Nau-Yh F2 EM16ga18_384 NA NA 0 0 NA 0 0 96.2 4.25 10.1007/s00122-012-1858-y NA NA t3726.T000037 qSH5 4 SH (cm), shoot height QTL analysis Nau-Dysx x Nau-Yh F2 RGA12F12R_300 NA NA 0 0 NA 0 0 91 3.64 10.1007/s00122-012-1858-y NA NA t3726.T000038 qTDW1.1 4 TDW (g), total dry weight QTL analysis Nau-Dysx x Nau-Yh F2 RamM2-706_616 NA NA 0 0 NA 0 0 44.5 3.54 10.1007/s00122-012-1858-y NA NA t3726.T000039 qTDW1.2 4 TDW (g), total dry weight QTL analysis Nau-Dysx x Nau-Yh F2 PM2em11_367 NA NA 0 0 NA 0 0 106.8 5.6 10.1007/s00122-012-1858-y NA NA t3726.T000040 qTDW5 4 TDW (g), total dry weight QTL analysis Nau-Dysx x Nau-Yh F2 PM17em10_327 NA NA 0 0 NA 0 0 37.8 4.43 10.1007/s00122-012-1858-y NA NA t3726.T000041 qTDW6 4 TDW (g), total dry weight QTL analysis Nau-Dysx x Nau-Yh F2 NAUrp586_752 NA NA 0 0 NA 0 0 182.5 3.14 10.1007/s00122-012-1858-y NA NA t3726.T000042 qTDW7 4 TDW (g), total dry weight QTL analysis Nau-Dysx x Nau-Yh F2 PM18odd44_362 NA NA 0 0 NA 0 0 32.1 4.84 10.1007/s00122-012-1858-y NA NA t3726.T000043 qTDW9 4 TDW (g), total dry weight QTL analysis Nau-Dysx x Nau-Yh F2 PM36em8_423 NA NA 0 0 NA 0 0 64.9 6.2 10.1007/s00122-012-1858-y NA NA t3726.T000044 Hs1_Rph 1 BCN-resistance, resistance against the beet cyst nematode (H. schachtii) QTL analysis Pegletta x Siletta Nova F2 E41M59-297 NA NA 0 0 OPI19-471 NA 0 0 71 22.6 10.1007/s00122-008-0937-6 NA NA t3726.T000045 4 PS, Plant shape QTL analysis rat-tail radish x Haru-S RIL RsHH019 NA NA 0 0 E6M4_87 NA 0 0 45 3.8 10.1270/jsbbs.63.218 t3726.M004667.1 NA t3726.T000046 4 MW, Main root weight (g) QTL analysis rat-tail radish x Haru-S RIL REL-13 NA NA 0 0 RES-5/HapII NA 0 0 48.9 6.9 10.1270/jsbbs.63.218 t3726.M004945.1 NA t3726.T000047 4 Pubescence QTL analysis rat-tail radish x Haru-S RIL RM_1 Rs1.0 R4 12265152 12265435 E5M8_427 NA 0 0 38.3 10.1 10.1270/jsbbs.63.218 t3726.M004681.1 NA t3726.T000048 4 MW, Main root weight (g) QTL analysis rat-tail radish x Haru-S RIL RES-1 NA NA 0 0 SLG_CAPS/PleI NA 0 0 24.9 11.7 10.1270/jsbbs.63.218 NA NA t3726.T000049 4 WW, Whole plant weight (g) QTL analysis rat-tail radish x Haru-S RIL AtSTS-1015 NA NA 0 0 REL-4 NA 4322497 4322742 2.8 3.8 10.1270/jsbbs.63.218 NA NA t3726.T000050 4 Pubescence QTL analysis rat-tail radish x Haru-S RIL RsSR104 NA NA 0 0 RsSA083 NA 0 0 77.1 13.6 10.1270/jsbbs.63.218 t3726.M004657.1 NA t3726.T000051 GSL-QTL-1 5 4MTB-GSL contents, 4-methylthio-3-butenyl glucosinolate contents, RsBCAT4 gene (GSL-QTL-1), RsIPMDH1 gene (GSL-QTL-2), RsMAM3 gene (GSL-QTL-4) QTL analysis TBS x AZ26H F2 RS2CL6432s Rs1.0 RUS00311 66248 66587 NA 0 0 17.3 5.87 10.1371/journal.pone.0053541 t3726.M003852.1 NA t3726.T000052 GSL-QTL-1 5 4MTB-GSL contents, 4-methylthio-3-butenyl glucosinolate contents, RsBCAT4 gene (GSL-QTL-1), RsIPMDH1 gene (GSL-QTL-2), RsMAM3 gene (GSL-QTL-4) QTL analysis TBS x AZ26H F2 S2CL4585s NA NA 0 0 NA 0 0 21.2 3.62 10.1371/journal.pone.0053541 NA NA t3726.T000053 GSL-QTL-1 5 4MTB-GSL contents, 4-methylthio-3-butenyl glucosinolate contents, RsBCAT4 gene (GSL-QTL-1), RsIPMDH1 gene (GSL-QTL-2), RsMAM3 gene (GSL-QTL-4) QTL analysis TBS x AZ26H F2 RS2CL3356s Rs1.0 R9 24447148 24447470 NA 0 0 26.8 3.85 10.1371/journal.pone.0053541 t3726.M005074.1 NA t3726.T000054 GSL-QTL-1 5 4MTB-GSL contents, 4-methylthio-3-butenyl glucosinolate contents, RsBCAT4 gene (GSL-QTL-1), RsIPMDH1 gene (GSL-QTL-2), RsMAM3 gene (GSL-QTL-4) QTL analysis TBS x AZ26H F2 RS2CL4290s NA NA 0 0 NA 0 0 64.5 7.36 10.1371/journal.pone.0053541 t3726.M004528.1 NA t3726.T000055 GSL-QTL-2 5 4MTB-GSL contents, 4-methylthio-3-butenyl glucosinolate contents, RsBCAT4 gene (GSL-QTL-1), RsIPMDH1 gene (GSL-QTL-2), RsMAM3 gene (GSL-QTL-4) QTL analysis TBS x AZ26H F2 RS2CL6432s Rs1.0 RUS00311 66248 66587 NA 0 0 10.1 19.1 10.1371/journal.pone.0053541 t3726.M003852.1 NA t3726.T000056 GSL-QTL-3 5 4MTB-GSL contents, 4-methylthio-3-butenyl glucosinolate contents, RsBCAT4 gene (GSL-QTL-1), RsIPMDH1 gene (GSL-QTL-2), RsMAM3 gene (GSL-QTL-4) QTL analysis TBS x AZ26H F2 RS2CL6594s Rs1.0 R3 24519701 24520065 NA 0 0 20.8 5.62 10.1371/journal.pone.0053541 t3726.M004373.1 NA t3726.T000057 GSL-QTL-4 5 4MTB-GSL contents, 4-methylthio-3-butenyl glucosinolate contents, RsBCAT4 gene (GSL-QTL-1), RsIPMDH1 gene (GSL-QTL-2), RsMAM3 gene (GSL-QTL-4) QTL analysis TBS x AZ26H F2 RS2CL6594s Rs1.0 R3 24519701 24520065 NA 0 0 1.54 10.1371/journal.pone.0053541 t3726.M004373.1 NA t3726.T000058 GSL-QTL-5 5 4MTB-GSL contents, 4-methylthio-3-butenyl glucosinolate contents, RsBCAT4 gene (GSL-QTL-1), RsIPMDH1 gene (GSL-QTL-2), RsMAM3 gene (GSL-QTL-4) QTL analysis TBS x AZ26H F2 S2CL4585s NA NA 0 0 NA 0 0 24 5.19 10.1371/journal.pone.0053541 NA NA