marker_id species_id marker_name sub_number marker_type mapped_genome_id reference_seq_name chr fwd_primer_seq fwd_primer_start_pos fwd_primer_end_pos rev_primer_seq rev_primer_start_pos rev_primer_end_pos target_seq target_chr target_start_pos target_end_pos allele enzyme comments doi pubmed f_active assembly_version t4679.M000024.1 t4679 API43_Mse1 1 CAPS t4679.G001 Onion v1.2 Scaffold_68792:HRSCAF_451878 GGAGGTGAAAAGGATGTGGAG 208050 208070 AGCAGCAGCAATAGGGTAGC 208717 208698 NA NA MseI 10.1007/s00122-006-0479-8 17180376 1 Onion v1.2 t4679.M000043.1 t4679 ACP331_TaqI 1 CAPS t4679.G001 Onion v1.2 CHR1 AAAATGCTCATGATAATTGGATCA 18014591 18014614 TTCTTCAAGAGCTGGGCAAT 18014728 18014709 NA T [‘CUDH2150’]; C [‘Nasik Red’] TaqI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000044.1 t4679 ACP187_TaqI 1 CAPS t4679.G001 Onion v1.2 Scaffold_80760:HRSCAF_463846 ATGGAAGGTGATGCAAGAGC 775478 775497 CAGTGAACTCATGAATCATCACA 775619 775597 NA C [‘CUDH2150’]; G [‘Nasik Red’] TaqI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000045.1 t4679 ACP695_DdeI 1 CAPS t4679.G001 Onion v1.2 CHR2 AATGACGTTGGCTGGTGTTT 10911894 10911913 CCGTGATCTCTCCATCAACA 10912127 10912108 NA T [‘CUDH2150’]; A [‘Nasik Red’] DdeI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000046.1 t4679 ACP172_PvuII 1 CAPS t4679.G001 Onion v1.2 Scaffold_71911:HRSCAF_454997 TCCAAATGTGCTATCTATTTACAAAA 1723727 1723752 TCTGAACAATGCTGGTGAAAA 1723875 1723855 NA G [‘CUDH2150’]; T [‘Nasik Red’] PvuII 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000047.1 t4679 ACP201_TaqI 1 CAPS t4679.G001 Onion v1.2 Scaffold_40444:HRSCAF_423530 CCCATTAGTGCGGTTAGGTT 298161 298180 GGCTCTTCAGTATGCGGATT 298287 298268 NA C [‘CUDH2150’]; T [‘Nasik Red’] TaqI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000048.1 t4679 ACP282_HinfI 1 CAPS t4679.G001 Onion v1.2 CHR2 TGTCTTTCATGGCTGATGGA 141451006 141451025 CATAAGAACTTAATGGCTTTATTACCT 141451112 141451086 NA C [‘CUDH2150’]; T [‘Nasik Red’] HinfI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000049.1 t4679 ACP325_TaqI 1 CAPS t4679.G001 Onion v1.2 CHR2 GGCATGGGAGGAATGGATTA 141450849 141450868 CTGCAGAACATGTGCACTACAA 141450994 141450973 NA C [‘CUDH2150’]; T [‘Nasik Red’] TaqI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000050.1 t4679 ACP250_HaeIII 1 CAPS t4679.G001 Onion v1.2 CHR2 TGATTGAGCCCATTGAAACA 185801239 185801258 TCTGAGTCCAGCAGAGAGCA 185801367 185801348 NA T [‘CUDH2150’]; C [‘Nasik Red’] HaeIII 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000052.1 t4679 ACP279_HinfI 1 CAPS t4679.G001 Onion v1.2 CHR2 CTCTGCCAGCAAAATCTCTG 196421543 196421562 TCGGTGTCACTGGTGACTGT 196421688 196421669 NA T [‘CUDH2150’]; C [‘Nasik Red’] HinfI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000053.1 t4679 ACP220_TaqI 1 CAPS t4679.G001 Onion v1.2 CHR2 TTTTGGAAGAGCAAGGATGG 285337107 285337126 ACACCAAGGTTGGGTTTCAA 285337245 285337226 NA T [‘CUDH2150’]; C [‘Nasik Red’] TaqI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000054.1 t4679 ACP185_TaqI 1 CAPS t4679.G001 Onion v1.2 Scaffold_75307:HRSCAF_458393 TGCAACCTTTTATTCCATTCC 647866 647886 AGCCTTGATTCTCCAAAGCA 647973 647954 NA T [‘CUDH2150’]; C [‘Nasik Red’] TaqI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000055.1 t4679 ACP204_TaqI 1 CAPS t4679.G001 Onion v1.2 CHR2 GTGGTGCACTGCATGGTTAC 287007520 287007539 TTCCTTACCAGGTCGTTAAAAA 287007662 287007641 NA T [‘CUDH2150’]; A [‘Nasik Red’] TaqI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000062.1 t4679 ACP186_TaqI 1 CAPS t4679.G001 Onion v1.2 CHR2 CCGAATACAAAATTAGGCTTTCA 274760879 274760901 AGGAATGAAGGAGACGACGA 274761028 274761009 NA G [‘CUDH2150’]; A [‘Nasik Red’] TaqI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000063.1 t4679 ACP135_HaeIII 1 CAPS t4679.G001 Onion v1.2 Scaffold_58426:HRSCAF_441512 GGGATATGAAAATTTGGGATG 918032 918052 CAAACACTCGAGACCGTTGA 918149 918130 NA C [‘CUDH2150’]; T [‘Nasik Red’] HaeIII 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000064.1 t4679 ACP143_HaeIII 1 CAPS t4679.G001 Onion v1.2 Scaffold_80387:HRSCAF_463473 TTCGATGATGCACGGTTACT 349765 349784 GGGGCTGCAAATAATGAACC 349873 349854 NA C [‘CUDH2150’]; A [‘Nasik Red’] HaeIII 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000065.1 t4679 ACP224_HaeIII 1 CAPS t4679.G001 Onion v1.2 Scaffold_92338:HRSCAF_475424 TGTCAGCGCCTTATTCTCAA 594996 595015 AATTGTGTAGCTTATTGGAAAGCA 595283 595260 NA G [‘CUDH2150’]; A [‘Nasik Red’] HaeIII 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000069.1 t4679 ACP306_TaqI 1 CAPS t4679.G001 Onion v1.2 Scaffold_34575:HRSCAF_344210 TTTGGCTGCAACAATCATTC 346543 346562 TTTATGCCAAAACAAATGCTTC 346655 346634 NA C [‘CUDH2150’]; T [‘Nasik Red’] TaqI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000070.1 t4679 ACP129_HaeIII 1 CAPS t4679.G001 Onion v1.2 CHR3 TGCAGGTAACTTTGCAGCTC 204726357 204726376 AGCAAGCACTTCATCGCATC 204726492 204726473 NA A [‘CUDH2150’]; G [‘Nasik Red’] HaeIII 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000071.1 t4679 ACP218_TaqI 1 CAPS t4679.G001 Onion v1.2 Scaffold_55730:HRSCAF_438816 TTTGGTGGAGATAATTCCTTGAA 606413 606435 TGATATATCCAACACTGCTTATCAA 606497 606473 NA T [‘CUDH2150’]; C [‘Nasik Red’] TaqI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000072.1 t4679 ACP265_HinfI 1 CAPS t4679.G001 Onion v1.2 Scaffold_91744:HRSCAF_474830 CTTGCTCTTTGCTCCCTGAC 1004918 1004937 TTTTGTGGAAGGCACGTGTA 1004997 1004978 NA G [‘CUDH2150’]; A [‘Nasik Red’] HinfI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000073.1 t4679 ACP311_TaqI 1 CAPS t4679.G001 Onion v1.2 Scaffold_65000:HRSCAF_448086 ACACACTGCCACTTCCAAAA 392668 392687 ACTTTTACCTCCGCCTCCAG 392818 392799 NA G [‘CUDH2150’]; A [‘Nasik Red’] TaqI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000074.1 t4679 ACP208_TaqI 1 CAPS t4679.G001 Onion v1.2 Scaffold_76125:HRSCAF_459211 TCCTCCACTTAATCAGCCAGA 258238 258258 TCTACAAAAATCAACAGATATACATGG 258384 258358 NA T [‘CUDH2150’]; A [‘Nasik Red’] TaqI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000076.1 t4679 ACP167_PvuII 1 CAPS t4679.G001 Onion v1.2 CHR5 AACGCAGTTGCTCGTTATACA 233076943 233076963 AGTGAAGGTGTGCGAGGTTT 233077092 233077073 NA A [‘CUDH2150’]; G [‘Nasik Red’] PvuII 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000082.1 t4679 ACP247_HaeIII 1 CAPS t4679.G001 Onion v1.2 CHR6 GTTGACGATGCCCTTTGATT 13742384 13742403 CCGTAAACAGAGTAACAAAGAATGA 13742520 13742496 NA T [‘CUDH2150’]; C [‘Nasik Red’] HaeIII 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000083.1 t4679 ACP290_PvuII 1 CAPS t4679.G001 Onion v1.2 Scaffold_55419:HRSCAF_438505 CAGGGAAAACGATTCAAAACA 675169 675189 TCTGTTTTGTGGAATTCTGTGA 675304 675283 NA G [‘CUDH2150’]; A [‘Nasik Red’] PvuII 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000085.1 t4679 ACP195_TaqI 1 CAPS t4679.G001 Onion v1.2 CHR5 GACAATTCCTACCAGACTCTTCTTG 60191610 60191634 TTTCAACGCAAATGAAAGCA 60191749 60191730 NA A [‘CUDH2150’]; G [‘Nasik Red’] TaqI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000088.1 t4679 ACP264_HinfI 1 CAPS t4679.G001 Onion v1.2 Scaffold_2786:HRSCAF_39525 GGAGGCACCTCACGAACTAC 62311 62330 CCAACTACGCGAATTTAGCC 62458 62439 NA T [‘CUDH2150’]; C [‘Nasik Red’] HinfI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000092.1 t4679 ACP288_PvuII 1 CAPS t4679.G001 Onion v1.2 Scaffold_89808:HRSCAF_472894 TGTCATTCTTTCACATTTATCTGC 66861 66884 AGGAGCACAAGGGAACAAAA 66984 66965 NA C [‘CUDH2150’]; T [‘Nasik Red’] PvuII 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000093.1 t4679 ACP276_HinfI 1 CAPS t4679.G001 Onion v1.2 CHR6 TGGAATGCGGGATCTAAGAA 117630803 117630822 CAGCTACAAGGACCCCTAGC 117630952 117630933 NA T [‘CUDH2150’]; C [‘Nasik Red’] HinfI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000094.1 t4679 ACP184_TaqI 1 CAPS t4679.G001 Onion v1.2 Scaffold_66877:HRSCAF_449963 AGATAACCATTTTCGCTCCA 337842 337861 GCATAACACAATCTTATTGCCTGT 337982 337959 NA Ａ [‘CUDH2150’]; Ｇ [‘Nasik Red’] TaqI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000096.1 t4679 ACP149_HaeIII 1 CAPS t4679.G001 Onion v1.2 Scaffold_69837:HRSCAF_452923 TGCTGAACACAACTTCCCTTT 344974 344994 ACCTACATCAACGCCTCTCG 345122 345103 NA Ｃ [‘CUDH2150’]; G [‘Nasik Red’] HaeIII 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000097.1 t4679 ACP171_PvuII 1 CAPS t4679.G001 Onion v1.2 Scaffold_78673:HRSCAF_461759 TCCAAACTCTGGCTTATGTGG 79235 79255 TAGCTGCCATCGAACGTACA 79374 79355 NA C [‘CUDH2150’]; T [‘Nasik Red’] PvuII 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000098.1 t4679 ACP213_TaqI 1 CAPS t4679.G001 Onion v1.2 Scaffold_37044:HRSCAF_391953 TTCGCGATCCTGAAGAAGAT 128979 128998 TGGTTTCATGTTCACCACCT 129112 129093 NA C [‘CUDH2150’]; T [‘Nasik Red’] TaqI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000099.1 t4679 ACP307_TaqI 1 CAPS t4679.G001 Onion v1.2 CHR7 TTGAAATACACAACACTGCAACT 134143783 134143805 GTACGTTGGTGCTCCCTGTT 134143895 134143876 NA Ｔ [‘CUDH2150’]; Ａ [‘Nasik Red’] TaqI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000100.1 t4679 ACP233_AluI 1 CAPS t4679.G001 Onion v1.2 CHR7 GTAAGCTATTATCACGCATTGTGaG 145035303 145035325 AAAACTCGCATATACCAAAGTTATGA 145035441 145035416 NA Ｃ [‘CUDH2150’]; Ｔ [‘Nasik Red’] AluI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000105.1 t4679 ACP196_TaqI 1 CAPS t4679.G001 Onion v1.2 Scaffold_60747:HRSCAF_443833 GCAAATCAAGTTCTGAAATTAGCA 80606 80629 GCCATTACAAAGGACGTTGA 80751 80732 NA C [‘CUDH2150’]; G [‘Nasik Red’] TaqI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000106.1 t4679 ACP191_TaqI 1 CAPS t4679.G001 Onion v1.2 CHR8 CCCACATGGGTTGTCTTGTA 55558509 55558528 TTCAGGCAACACAAATTCACA 55558625 55558605 NA T [‘CUDH2150’]; C [‘Nasik Red’] TaqI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000107.1 t4679 ACP239_HaeIII 1 CAPS t4679.G001 Onion v1.2 Scaffold_42423:HRSCAF_425509 TTAGAGCGCTTCAGCATCAA 659049 659068 CAACTATGGGGTGAAGCACA 659198 659179 NA G [‘CUDH2150’]; T [‘Nasik Red’] HaeIII 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000108.1 t4679 ACP127_HaeIII 1 CAPS t4679.G001 Onion v1.2 Scaffold_8461:HRSCAF_104249 AACCATTGCCAACACCAAAT 817154 817173 GCAATTCGTGACCTTGCTTT 817250 817231 NA C [‘CUDH2150’]; T [‘Nasik Red’] HaeIII 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000109.1 t4679 ACP273_HinfI 1 CAPS t4679.G001 Onion v1.2 CHR8 GCAGACTTCAGAGGAAGCAGA 180631049 180631069 TTGCAACTGGAATTGACAACA 180631197 180631177 NA T [‘CUDH2150’]; C [‘Nasik Red’] HinfI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000113.1 t4679 ACP206_TaqI 1 CAPS t4679.G001 Onion v1.2 Scaffold_50387:HRSCAF_433473 TCCAGCAGCTAAATAAGGAAGC 241450 241471 TCATGTGGTACCCTTTGTTCC 241597 241577 NA G [‘CUDH2150’]; A [‘Nasik Red’] TaqI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000115.1 t4679 ACP142_HaeIII 1 CAPS t4679.G001 Onion v1.2 Scaffold_70070:HRSCAF_453156 CAACAAGTAAACCATGGCATC 1043147 1043167 TGGTGCATTTGTGGACATTT 1043290 1043271 NA A [‘CUDH2150’]; T [‘Nasik Red’] HaeIII 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000116.1 t4679 ACP275_HinfI 1 CAPS t4679.G001 Onion v1.2 CHR1 GCTTGTACTCATGGGACATACG 166982268 166982289 GCTATGGTACGTAGGCGTGA 166982389 166982370 NA C [‘CUDH2150’]; G [‘Nasik Red’] HinfI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000117.1 t4679 ACP199_TaqI 1 CAPS t4679.G001 Onion v1.2 CHR1 GGAAACAAAGTCGTGTTGCAT 238878127 238878147 TTTGGCTGGTGATGTTTTGA 238878220 238878201 NA G [‘CUDH2150’]; A [‘Nasik Red’] TaqI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000118.1 t4679 ACP313_TaqI 1 CAPS t4679.G001 Onion v1.2 CHR1 CACTCATCCTGTCATCCATGTT 308680172 308680193 AGTTTGTAAAGCGGTGCACAT 308680310 308680290 NA C [‘CUDH2150’]; T [‘Nasik Red’] TaqI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000119.1 t4679 ACP197_TaqI 1 CAPS t4679.G001 Onion v1.2 Scaffold_40535:HRSCAF_423621 GCACGCAGCTCAAATTTACA 919239 919258 AGCATTTCCAATCGTTGCTT 919375 919356 NA A [‘CUDH2150’]; G [‘Nasik Red’] TaqI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000120.1 t4679 ACP215_TaqI 1 CAPS t4679.G001 Onion v1.2 Scaffold_14211:HRSCAF_153698 TTCCATTCACACAGCCTTCA 98910 98929 TGAACCGACCGTTAGTCACC 99046 99027 NA C [‘CUDH2150’]; T [‘Nasik Red’] TaqI 10.1186/1471-2164-13-637 23157543 1 Onion v1.2 t4679.M000139.1 t4679 jnurf05 1 CAPS t4679.G001 Onion v1.2 CHR2 ATTATGGCCGATTTCTCAGC 95072187 95072206 AACAAATCAATCGCCTGAAAA 95073087 95073067 AAAAAAAATCCTTTAGCAACTAAAATAATTAATCATGTTTTTTTTAACAAATCAATCGCCTGAAAATAAACTAGTAAGTTAAAAAATGTGTTTATCTATATTTGTTTTATTATATTTTTTTTCCACTT 519+378 [506L]; 888 [H6] DraI 10.1007/s10681-012-0851-5 NA 1 Onion v1.2 t4679.M000224.1 t4679 jnurf06 1 CAPS t4679.G001 Onion v1.2 Scaffold_88464:HRSCAF_471550 GGTTCTTCGCAAAGTTCTCG 139232 139251 TGTGAAAAGATTGGACATACTGC 139997 139975 GAGGGAAGAGCACGTTATTCATCTTGGGGAGGTTCTTCGCAAAGTTCTCGAAGTGTCACTTTTGGTGTAAGGAGGTGCGTTTCTTGGGGCATGTAGTCTCAACAGAGGGTTTAGTTGTGGATCCCGCT 425+341 [506L]; 425+150 [H6] TaqI 10.1007/s10681-012-0851-5 NA 1 Onion v1.2 t4679.M000225.1 t4679 jnurf10 1 CAPS t4679.G001 Onion v1.2 CHR2 CCTCACCAAAGCTGATTTTGA 301033536 301033556 TGCCTTGATCAGTCGTGATG 301033903 301033884 ACAACTGGGGGATGTTAATGCCCTAAATCTTCTTGATTACCTCACCAAAGCTGATTTTGAAGTCCTAATGAAGGAACAACTCCTGATGAAGGAACTGCTTGATAGCTATCAATAGCTCAATCAGCAAA 368 [506L]; 251+117 [H6] PvuII 10.1007/s10681-012-0851-5 NA 1 Onion v1.2 t4679.M000226.1 t4679 jnurf63 1 CAPS t4679.G001 Onion v1.2 CHR2 TCCTTTGACGCTTGGTATCC 64165784 64165802 GGGGTGGAAATAGATGTAGCC 64166228 64166208 CTTCTGAGTATGTCAATGTTGCTAGATGGTTCAAACACATTGATGCCCTCATTAGAATCAGTGGTGTGACTGAGGAAGGGAAAGGAGTTAAAATTGAAGGTGCTGCTCCAGCTGAAGCTACAGCATCT NA EcoRV 10.1007/s10681-012-0851-5 NA 1 Onion v1.2 t4679.M000227.1 t4679 jnurf17 1 CAPS t4679.G001 Onion v1.2 Scaffold_58321:HRSCAF_441407 CCTGGAATGTATAGCAAGCCTAA 290337 290359 GAGCCCACTGCTATTGAGGA 290911 290892 AAGCGAGCCCACTGCTATTGAGGATTCTATTGATAAGGCAATATAGGCACTTAAAAGAAAAACGAGTGACAATTCTTTTGTGGATATTCCACTTCCTTCCCTAATGAAAATCCTAAGTCGGTGGGTGA 427+148 [506L]; 575 [H6] XhoI 10.1007/s10681-012-0851-5 NA 1 Onion v1.2 t4679.M000255.1 t4679 ACP670 1 CAPS t4679.G001 Onion v1.2 Scaffold_75766:HRSCAF_458852 GTCCACCATCACCTGCAGTA 172951 172970 AAATTGCAAGCAACTAAGACTGTG 173199 173176 NA NA Hpy188I 10.1007/s00122-013-2232-4 24247236 1 Onion v1.2 t4679.M000257.1 t4679 ACP675 1 CAPS t4679.G001 Onion v1.2 CHR2 GCTAGGCGAATCTGGGTCTA 430922522 430922541 GGATTGCTTTTAATGTGATACAGG 430922671 430922648 NA NA AluI 10.1007/s00122-013-2232-4 24247236 1 Onion v1.2 t4679.M000258.1 t4679 ACP691 1 CAPS t4679.G001 Onion v1.2 Scaffold_88665:HRSCAF_471751 TCTATAAGTTCTCCTCCCACCCG 435438 435458 AACTCCAGAGGTTTCGCAGA 435542 435523 NA NA HpaII 10.1007/s00122-013-2232-4 24247236 1 Onion v1.2 t4679.M000259.1 t4679 ACP676 1 CAPS t4679.G001 Onion v1.2 CHR2 AGCTGTTGGTTGTGGGTTTT 430921453 430921472 GACATCCCAGGGTCAAAAGA 430921600 430921581 NA NA RsaI GACATCCCAGGGTCAAAAGA CCAGTGGATGATGATGCTGT 10.1007/s00122-013-2232-4 24247236 1 Onion v1.2 t4679.P0000002 t4679 C22655 1 CAPS t4679.G001 Onion v1.2 (140621) Scaffold_82366:HRSCAF_465452 TCTCTTCTCTAAACGGTTTCACTG 305238 305257 GTTGCAGGTTCCTGATGGAG 305631 305608 NA NA 0 0 NA AluI 10.1007/s11032-017-0697-6 NA 1 Onion v1.2 t4679.P0000003 t4679 C25414 1 CAPS t4679.G001 Onion v1.2 (140621) CHR5 GATGGAACCCCCAATTCTCT 110622796 110622815 TCCGTAGCCTGTCTTTAGTCG 110623185 110623165 NA NA 0 0 NA DraI 10.1007/s11032-017-0697-6 NA 1 Onion v1.2 t4679.P0000005 t4679 C49685 1 CAPS t4679.G001 Onion v1.2 (140621) Scaffold_50504:HRSCAF_433590 CCAGCCATCACAGAGTACCA 319552 319571 CGCCTCCTCAGTATTTCTCG 320347 320328 NA NA 0 0 NA NdeI 10.1007/s11032-017-0697-6 NA 1 Onion v1.2 t4679.P0000007 t4679 DMR2 1 CAPS t4679.G001 Onion v1.2 (140621) NA GGAAGGTTCGGATGCAGTAA 0 0 GCATTTCGGCTGCAGCTATTT 0 0 NA NA 0 0 NA MspI 10.1007/s10681-015-1601-2 NA 1 Onion v1.2 t4679.P0000008 t4679 DMR3 1 CAPS t4679.G001 Onion v1.2 (140621) NA TTCCAAGAATGAATGCACAGTAG 0 0 CAGGCGAATCCAAGTACACA 0 0 NA NA 0 0 NA MspI 10.1007/s10681-015-1601-2 NA 1 Onion v1.2 t4679.P0000009 t4679 DMR4 1 CAPS t4679.G001 Onion v1.2 (140621) NA TGATGCATTCAGCAACAACTT 0 0 TCGAATTCTGAGCGTTCAATC 0 0 NA NA 0 0 NA AciI 10.1007/s10681-015-1601-2 NA 1 Onion v1.2 t4679.P0000015 t4679 RF23881 1 CAPS t4679.G001 Onion v1.2 (140621) CHR2 GATCCTCATGGCTTTGGAGA 114002720 114002739 GGGAAGTGAACACGTTTGGT 114004065 114004046 NA NA 0 0 NA PvuII Blast_hit_num.:2 10.1007/s00122-015-2584-z 26215184 1 Onion v1.2 t4679.P0000017 t4679 RF24123 1 CAPS t4679.G001 Onion v1.2 (140621) Scaffold_37831:HRSCAF_411422 ATCTAAGCGGCACACTCGAT 34105 34124 CCCAACAGTTCCTCGACCTA 34964 34945 NA NA 0 0 NA NdeI 10.1007/s00122-015-2584-z 26215184 1 Onion v1.2 t4679.P0000018 t4679 RF24437 1 CAPS t4679.G001 Onion v1.2 (140621) CHR2 TCTGCCTGAAAAGCTTGAGA 113325897 113325916 TTAACTGCAGCAGCATGAGA 113326259 113326240 NA NA 0 0 NA TaqI 10.1007/s00122-015-2584-z 26215184 1 Onion v1.2 t4679.P0000019 t4679 RF24501 1 CAPS t4679.G001 Onion v1.2 (140621) CHR2 CATCAACTTTTGGGACATGG 112516316 112516335 AGGAGACTCAAGCGCAATGT 112516638 112516619 NA NA 0 0 NA SalI 10.1007/s00122-015-2584-z 26215184 1 Onion v1.2 t4679.P0000020 t4679 RF24998 1 CAPS t4679.G001 Onion v1.2 (140621) Scaffold_91643:HRSCAF_474729 CTGCAGACCGTGCTTACAAA 58814 58833 TTTAACAGCACCCCCTTCAC 59226 59207 NA NA 0 0 NA AciI 10.1007/s00122-015-2584-z 26215184 1 Onion v1.2 t4679.P0000021 t4679 RF25191 1 CAPS t4679.G001 Onion v1.2 (140621) CHR2 TTAGATGGAGGCGTCGAAAT 109981942 109981961 AAATCGTGAGGCTTCTTTGG 109982472 109982453 NA NA 0 0 NA EcoRI 10.1007/s00122-015-2584-z 26215184 1 Onion v1.2 t4679.P0000022 t4679 RF26780 1 CAPS t4679.G001 Onion v1.2 (140621) CHR2 GGGCCTTACCCTCTAAACCA 112994406 112994426 ACAAAGCTTCAACAAACGAAA 112995213 112995194 NA NA 0 0 NA HindIII 10.1007/s00122-015-2584-z 26215184 1 Onion v1.2 t4679.P0000023 t4679 RF27463 1 CAPS t4679.G001 Onion v1.2 (140621) CHR2 TGCAAGATGGATAATGGTTCA 114864799 114864820 TTGCTAAGGAAACGTGATATGC 114865219 114865199 NA NA 0 0 NA DraI 10.1007/s00122-015-2584-z 26215184 1 Onion v1.2 t4679.P0000024 t4679 RF27528 1 CAPS t4679.G001 Onion v1.2 (140621) CHR2 TGGGTGAAAATTATTGGTGGA 113591829 113591849 AACCCTTTTCCCATTGGAGT 113592462 113592443 NA NA 0 0 NA DraI 10.1007/s00122-015-2584-z 26215184 1 Onion v1.2 t4679.P0000026 t4679 RF28314 1 CAPS t4679.G001 Onion v1.2 (140621) CHR2 AGAACAAGTTGCCCCCAAG 103253330 103253349 TTCGTGGTTGGAAACTCAGA 103253677 103253659 NA NA 0 0 NA SspI 10.1007/s00122-015-2584-z 26215184 1 Onion v1.2 t4679.P0000029 t4679 RF31869 1 CAPS t4679.G001 Onion v1.2 (140621) CHR2 AGCTTTGGGGATCTTGGTTT 110351455 110351474 AATGTTGCACCACAAGTTCG 110351614 110351595 NA NA 0 0 NA TaqI 10.1007/s00122-015-2584-z 26215184 1 Onion v1.2