marker_id species_id marker_name sub_number marker_type mapped_genome_id reference_seq_name chr fwd_primer_seq fwd_primer_start_pos fwd_primer_end_pos rev_primer_seq rev_primer_start_pos rev_primer_end_pos target_seq target_chr target_start_pos target_end_pos allele enzyme comments doi pubmed f_active assembly_version t3656.M000003.1 t3656 CM5.50_TaqI 1 CAPS t3656.G001 v3.6.1 chr11 GCTACGCTGCAGTCTCACAG 1919093 1919112 CTTGGTTCATGGCATTCAAG 1919805 1919786 NA 540 [PI 161375]; 350+190 [‘Piel de Sapo’ (line T111)] TaqI 10.1139/g03-139 15060588 1 CM3.6.1_pseudomol t3656.M000004.1 t3656 CM1.41_MSlI 1 CAPS t3656.G001 v3.6.1 chr02 AGAATTGCCCCATTAAGAAG 3223233 3223252 CGACGATCAGATCTCCGAGT 3224718 3224699 NA + [PI 161375]; + [‘Piel de Sapo’ (line T111)] MslI 10.1139/g03-139 15060588 1 CM3.6.1_pseudomol t3656.M000010.1 t3656 CM1.11_AluI 1 CAPS t3656.G001 v3.6.1 chr04 CAAACCTGATGCATTTCCAG 29444140 29444159 GTAGTGGAACCACGCCAAAC 29445033 29445014 NA + [PI 161375]; + [‘Piel de Sapo’ (line T111)] AluI 10.1139/g03-139 15060588 1 CM3.6.1_pseudomol t3656.M000015.1 t3656 CM1.21_NlaIII 1 CAPS t3656.G001 v3.6.1 chr04 GAAGTGTAAACCTCAGTGCAAA 32980614 32980635 AACCCATCAAGAAGGGTGTG 32981799 32981780 NA + [PI 161375]; + [‘Piel de Sapo’ (line T111)] NlaIII 10.1139/g03-139 15060588 1 CM3.6.1_pseudomol t3656.M000021.1 t3656 CM2.22_BfaI 1 CAPS t3656.G001 v3.6.1 chr05 ATCCCCAGATGTGATTTTGC 4927744 4927763 TCCTTTTTCAGCCTTGCACT 4928108 4928089 NA + [PI 161375]; + [‘Piel de Sapo’ (line T111)] BfaI 10.1139/g03-139 15060588 1 CM3.6.1_pseudomol t3656.M000034.1 t3656 MC252_AluI 1 CAPS t3656.G001 v3.6.1 chr02 TCGGAAGGAGCAGTTATTCG 27006608 27006627 AGGTCCAACCTCCTCAAGGT 27007916 27007897 NA + [PI 161375]; + [‘Piel de Sapo’ (line T111)] AluI 10.1139/g03-139 15060588 1 CM3.6.1_pseudomol t3656.M000136.1 t3656 Acs1-c1 1 CAPS t3656.G001 v3.6.1 chr11 TTTTCTGCTAACCCATCTGAAT 31530226 31530248 CACTGCCCACCCCATATATC 31531892 31531873 NA NA NA 10.1270/jsbbs.51.107 NA 1 CM3.6.1_pseudomol t3656.M000157.1 t3656 Acs1-c2 1 CAPS t3656.G001 v3.6.1 chr11 CAACCAAACCCTTAGCTTAT 31526882 31526901 AATCCTTCCAATCCCTTAGGCAC 31528732 31528710 NA NA HindIII 10.1270/jsbbs.51.107 NA 1 CM3.6.1_pseudomol t3656.M000244.1 t3656 C-TCG/GGT-400 1 CAPS t3656.G001 v3.6.1 chr09 GGACCCAAACTTACCCTACACTT 171692 171714 TTCAAAATCAAAGGAAATGCAA 172601 172580 NA 381+529 [MR-1 (carrier of Fom-1)]; 910 [P11 (non-carrier of Fom-1)] EcoRI 10.1007/s10681-009-9881-z NA 1 CM3.6.1_pseudomol t3656.M000245.1 t3656 CAPS2 1 CAPS t3656.G001 v3.6.1 chr09 TTTCGAGGTTAGAGGTTTGTCA 171381 171402 CAATTTTGGTTTCTTTGGATGG 172083 172062 NA 232+9+456+5 [MR-1 (carrier of Fom-1)]; 232+9+366+91+5 [P11 (non-carrier of Fom-1)] TaqI 10.1007/s10681-009-9881-z NA 1 CM3.6.1_pseudomol t3656.M000249.1 t3656 PM3-CAPS 1 CAPS t3656.G001 v3.6.1 chr05 TTAAATATAAAAATCATGAACATGTC 26059166 26059191 GAATTCACTTACCATCCAATG 26059385 26059365 NA 220 [TGR-1551]; T [TGR-1551]; 113+107 [‘Bola de Oro’]; C [‘Bola de Oro’] NA 10.1007/s00122-010-1483-6 21243332 1 CM3.6.1_pseudomol t3656.M000250.1 t3656 PM5-CAPS 1 CAPS t3656.G001 v3.6.1 chr05 AACATGCGATAATAAATAGC 27611952 27611971 TTTGAAGAATTGTCATCATTG 27612192 27612172 NA 162+79 [TGR-1551]; A [TGR-1551]; 241 [‘Bola de Oro’]; T [‘Bola de Oro’] NA 10.1007/s00122-010-1483-6 21243332 1 CM3.6.1_pseudomol t3656.M000252.1 t3656 Fom2_CAPS1 1 CAPS t3656.G001 v3.6.1 chr11 TGCTCCTTTGGCTTCCTGT 6913811 6913827 GAGTCTATTGTTTCGCTTCA 6914110 6914091 NA 300 [American melon (Cantaloupe)]; A [American melon (Cantaloupe)]; 281 [Hami melon (xianguo 027-5)]; G [Hami melon (xianguo 027-5)] NA 10.1007/s11032-010-9439-8 NA 1 CM3.6.1_pseudomol t3656.M000257.1 t3656 CAPS3 1 CAPS t3656.G001 v3.6.1 chr09 ACCTGGCAACTTTGGTTTTG 847105 847124 GTTGGAGATGTTCCCTTGGA 848560 848541 NA 1461+1010+447 [F1 of P11 x MR-1]; 1461 [MR-1]; 1010+447 [P11] HaeIII 10.1111/j.1439-0523.2010.01800.x NA 1 CM3.6.1_pseudomol t3656.M000258.1 t3656 C-MRGH12 1 CAPS t3656.G001 v3.6.1 chr09 TGATGCTGCTGATGGACTTC 799116 799135 CGTCGGGTATGTCTCCATCT 800590 800571 NA 972+807+503+165 [F1 of P11 x MR-1]; 807+503+165 [MR-1]; 972+503 [P11] XmnI 10.1111/j.1439-0523.2010.01800.x NA 1 CM3.6.1_pseudomol t3656.M000259.1 t3656 C-MRGH13 1 CAPS t3656.G001 v3.6.1 chr09 TGAGGAAGCAGGAGGGGAAC 701290 701309 CCACCCATTCCCCATATTCC 702441 702422 NA 661(662)+375+326+108+49 [F1 of P11 x MR-1]; 662+326+108+49 [MR-1]; 661+375+108 [P11] TaqI 10.1111/j.1439-0523.2010.01800.x NA 1 CM3.6.1_pseudomol t3656.M000280.1 t3656 M29 1 CAPS t3656.G001 v3.6.1 chr12 CATCAATTAAGACGACACACAGG 22086619 22086640 TCGAGAACCTTTTTATTATTGATGG 22086982 22086960 NA 191+174 [PI161375]; 360 [‘Piel de sapo’] AflIII 10.1007/s00122-005-0019-y 16052354 1 CM3.6.1_pseudomol t3656.M000282.1 t3656 D08 1 CAPS t3656.G001 v3.6.1 chr12 GTGCCCCAACGACTAAAAAG 12423506 12423525 GCTTCCTGACAAGTAGTGGC 12424263 12424244 NA 560+190 [PI161375]; 750 [‘Piel de sapo’] EcoRV 10.1007/s00122-005-0019-y 16052354 1 CM3.6.1_pseudomol t3656.M000289.1 t3656 RPW 1 CAPS t3656.G001 v3.6.1 chr05 CAGTTGGGTAATCGGGAG 26819402 26819419 GCATTGGGTGTTCCGTTTA 26820354 26820336 NA 265+380 [Ano2]; 645 [Hami413]; 645 [Queen] AluI 10.1007/s10681-011-0406-1 NA 1 CM3.6.1_pseudomol t3656.M000295.1 t3656 Vat 1 CAPS t3656.G001 v3.6.1 chr00 TCTTCTTCCCATTCTTCATT 7446408 7446427 TTGCCTATTGCTATTACTACTG 7446898 7446877 NA 107+107 [Ano2]; 214 [Hami413]; 214 [Queen] MseI 10.1007/s10681-011-0406-1 NA 1 CM3.6.1_pseudomol t3656.M000295.2 t3656 Vat 2 CAPS t3656.G001 v3.6.1 chr05 TTGCCTATTGCTATTACTACTG 26425018 26425039 TCTTCTTCCCATTCTTCATT 26425508 26425489 NA 107+107 [Ano2]; 214 [Hami413]; 214 [Queen] MseI 10.1007/s10681-011-0406-1 NA 1 CM3.6.1_pseudomol t3656.M000297.1 t3656 MRGH63B 1 CAPS t3656.G001 v3.6.1 chr05 GGAAGAACAGAGCCAAAGAA 25972368 25972387 GAACATCTCATCCCTCAAGTT 25972665 25972646 NA 139+101 [Ano2]; 240 [Hami413]; 240 [Queen] MspI 10.1007/s10681-011-0406-1 NA 1 CM3.6.1_pseudomol t3656.M000302.1 t3656 NBS1-CAPS 1 CAPS t3656.G001 v3.6.1 chr09 TATTGCTAAAGCTGTTTTCAAAAGCG 798408 798431 AACAAAAACTTTTCGATTTCCTAAGTT 798621 798595 NA 250 [(C. melo PI 414723)]; 45+205 [(C. melo Vedrantais)] NcoI 10.1007/s00122-004-1845-z 15551034 1 CM3.6.1_pseudomol t3656.M000306.1 t3656 mERE 1 CAPS t3656.G001 v3.6.1 chr07 TCTCCAAACTTGGCGAAGAG 1163963 1163982 CAATATCGCACATGGAGCAG 1164809 1164790 NA 111+210+527 [PNU-D1 (ssp. cantalupensis)]; 210+638 [PNU-WT1 (ssp. agrestis)] TaqI 10.1007/s11032-014-0088-1 NA 1 CM3.6.1_pseudomol t3656.M000308.1 t3656 mUBI 1 CAPS t3656.G001 v3.6.1 chr07 GGGTTTTGGCTTTCTGGTCT 1058523 1058542 ACCACCACGAACAGCATTTT 1059916 1059897 NA 1300+72 [PNU-D1 (ssp. cantalupensis)]; 1102+268+72 [PNU-WT1 (ssp. agrestis)] TaqI 10.1007/s11032-014-0088-1 NA 1 CM3.6.1_pseudomol t3656.M000309.1 t3656 62-CAPS 1 CAPS t3656.G001 v3.6.1 chr09 GGAGAAGATGCTAGAGCCATTC 839638 839659 AATCGGGCATCCTGTTTTGG 840046 840027 NA 420 [(C. melo PI 414723)]; 90+330 [(C. melo Vedrantais)] NA 10.1007/s00122-004-1845-z 15551034 1 CM3.6.1_pseudomol t3656.M000400.1 t3656 PSI_39-H08 1 CAPS t3656.G001 v3.6.1 chr07 TCATGGATTGCCAGAGTTCA 23754839 23754858 GTTCCGAGTGGATTTGAAGG 23755541 23755522 NA NA BclI 10.1007/s00122-007-0694-y 18094954 1 CM3.6.1_pseudomol t3656.M000402.1 t3656 PSI_22-B02 1 CAPS t3656.G001 v3.6.1 chr12 CCAAGAACTTTGCCTCCAAC 2850196 2850215 GCAGGCTGAACAAATGTGG 2850988 2850970 NA NA HinfI 10.1007/s00122-008-0897-x 18825359 1 CM3.6.1_pseudomol t3656.M000408.1 t3656 15d_04-C12 1 CAPS t3656.G001 v3.6.1 chr05 CAGGTGAAAATCTGCATTCG 6400521 6400540 CGTCGAAGAATTTTGGTGGT 6400925 6400906 NA NA PflMI 10.1007/s00122-008-0897-x 18825359 1 CM3.6.1_pseudomol t3656.M001123.1 t3656 SSH1N10 1 CAPS t3656.G001 v3.6.1 chr03 CCAAATTGGGAATTTTTGTAGG 30907042 30907063 AAATAATTCCAATCCATTGTTCG 30907337 30907315 NA NA AluI 10.1007/s00122-007-0694-y 18094954 1 CM3.6.1_pseudomol t3656.M001127.1 t3656 46d_19-G04 1 CAPS t3656.G001 v3.6.1 chr03 GTATACAACTAGGCATTTAGATATT 21966652 21966676 ATAACATCTCCGACTTCAGAT 21966911 21966891 NA NA FokI 10.1007/s00122-007-0694-y 18094954 1 CM3.6.1_pseudomol t3656.M001128.1 t3656 AB125975 1 CAPS t3656.G001 v3.6.1 chr09 AACGACGACGAGTTCTCACC 21799234 21799253 TCCAACTTATGACCAGAAAATCA 21799944 21799922 NA NA EcoRI 10.1007/s00122-007-0694-y 18094954 1 CM3.6.1_pseudomol t3656.M001129.1 t3656 AB125976 1 CAPS t3656.G001 v3.6.1 chr07 TTCAGACGACGAAACAGAGC 28210998 28211017 GTTACCGCTTCCGACATTTG 28211851 28211832 NA NA NcoI 10.1007/s00122-007-0694-y 18094954 1 CM3.6.1_pseudomol t3656.M001134.1 t3656 A_15-E06 1 CAPS t3656.G001 v3.6.1 chr04 CACAAAGTTCACAAACGAAATAAA 1249770 1249793 TAGCAATTGGGCAACATCAG 1250263 1250244 NA NA MseI 10.1007/s00122-007-0694-y 18094954 1 CM3.6.1_pseudomol t3656.M001135.1 t3656 AI_20-E02 1 CAPS t3656.G001 v3.6.1 chr10 CCTTCGCTTTTCATCCATGT 3357732 3357751 ATGCCAATGGAAGCGTTAAG 3358477 3358458 NA NA TaqI 10.1007/s00122-007-0694-y 18094954 1 CM3.6.1_pseudomol t3656.M001136.1 t3656 FR12E16 1 CAPS t3656.G001 v3.6.1 chr09 TGGAGTACAAATTGAACGAATATAA 22217452 22217476 GGGCAGTACTCGAGAATCGT 22218361 22218342 NA NA HinfI 10.1007/s00122-007-0694-y 18094954 1 CM3.6.1_pseudomol t3656.M001137.1 t3656 46d_01-B10 1 CAPS t3656.G001 v3.6.1 chr08 CCCCAGTTACGACTCATGCT 32418857 32418876 CTTCTCTCACGCCAGAATCC 32420007 32419990 NA NA DraI 10.1007/s00122-007-0694-y 18094954 1 CM3.6.1_pseudomol t3656.M001143.1 t3656 PS_25-G02 1 CAPS t3656.G001 v3.6.1 chr05 GAGAAAGGCGAAGGGTTCTT 10177921 10177940 TAAATCGTGACAGCTCATGG 10178455 10178436 NA NA NlaIII 10.1007/s00122-008-0897-x 18825359 1 CM3.6.1_pseudomol t3656.M001144.1 t3656 PSI_38-G06 1 CAPS t3656.G001 v3.6.1 chr02 TATGCTCCATGACGCAGGTA 15403998 15404017 CCTGTTCTTTGTAGCCACCTT 15404408 15404388 NA NA HhaI 10.1007/s00122-008-0897-x 18825359 1 CM3.6.1_pseudomol t3656.M001145.1 t3656 A_31-C07 1 CAPS t3656.G001 v3.6.1 chr07 TCAACATCCCGAGAATCTCAC 889838 889858 GTCGCTCTCAACCCTAAACCT 890249 890229 NA NA PstI 10.1007/s00122-008-0897-x 18825359 1 CM3.6.1_pseudomol t3656.M001146.1 t3656 PS_18-G09 1 CAPS t3656.G001 v3.6.1 chr04 TCAGATGCATTACGGTTCCA 26172963 26172982 GCATTAGTGGGCGATCAACT 26173069 26173050 NA NA NdeI 10.1007/s00122-008-0897-x 18825359 1 CM3.6.1_pseudomol t3656.M001148.1 t3656 CI_36-D02 1 CAPS t3656.G001 v3.6.1 chr11 GACTGGGCTTGTTGGATTACA 22634231 22634251 TGCCGCTGCTACACTTAACTT 22636848 22636828 NA NA NlaIII 10.1007/s00122-008-0897-x 18825359 1 CM3.6.1_pseudomol t3656.M001149.1 t3656 PS_33-A09 1 CAPS t3656.G001 v3.6.1 chr04 TGCTGGCAGCTCTTCAATTAT 17270707 17270727 CTGCTACAATGCCTCCTGAAG 17271269 17271249 NA NA FokI 10.1007/s00122-008-0897-x 18825359 1 CM3.6.1_pseudomol t3656.M001150.1 t3656 HS_15-F12 1 CAPS t3656.G001 v3.6.1 chr12 CCGATCTATACCTTCTCTACC 21942659 21942679 TACAAATCTGCCCTCATCGCC 21944462 21944442 NA NA RsaI 10.1007/s00122-008-0897-x 18825359 1 CM3.6.1_pseudomol t3656.P0000124 t3656 Fom1-R 1 CAPS t3656.G001 CM3.6.1_pseudomol chr09 ATGAGTTTTGATAGTTTCATAAG 767004 767023 GAACACTCCCTTAGATACTT 767571 767549 NA NA 0 0 NA BspCNI 10.1007/s10681-015-1420-5 NA 1 CM3.6.1_pseudomol t3656.P0000125 t3656 Fom1-S 1 CAPS t3656.G001 CM3.6.1_pseudomol chr09 ATGAGTTTTGATAGTTTCATAAG 767004 767023 GAACACTCCCTTAGATACTT 767571 767549 NA NA 0 0 NA BSspHI 10.1007/s10681-015-1420-5 NA 1 CM3.6.1_pseudomol t3656.P000013.1 t3656 Fom1-R 1 CAPS t3656.G001 CM3.6.1_pseudomol chr09 GAACACTCCCTTAGATACTT 767004 767023 ATGAGTTTTGATAGTTTCATAAG 767571 767549 BspCNI 10.1007/s10681-015-1420-5 1 CM3.6.1_pseudomol t3656.P000014.1 t3656 Fom1-S 1 CAPS t3656.G001 CM3.6.1_pseudomol chr09 GAACACTCCCTTAGATACTT 767004 767023 ATGAGTTTTGATAGTTTCATAAG 767571 767549 BSspHI 10.1007/s10681-015-1420-5 1 CM3.6.1_pseudomol t3656.P0003208 t3656 M16H 1 CAPS t3656.G001 CM3.6.1_pseudomol chr01 TCCCAATAATCTGCAACCAAG 2018636 2018656 CCTACTTCAAACTGCTGCTCATA 2019353 2019331 NA NA 0 0 NA NA 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P0003209 t3656 M14H 1 CAPS t3656.G001 CM3.6.1_pseudomol chr01 CAAATGTAGAGGACACAAGGAAGAT 17923137 17923161 AAGCAGGTGGTTCAGGAGGT 17923837 17923818 NA NA 0 0 NA NA 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P0003210 t3656 M28E 1 CAPS t3656.G001 CM3.6.1_pseudomol chr02 AGGCATACTATGAAGATGAGACCG 13740304 13740327 GGAATTTGGAGATGATGGGAGT 13741049 13741028 NA NA 0 0 NA NA 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P0003211 t3656 M24P 1 CAPS t3656.G001 CM3.6.1_pseudomol chr02 TCACTCAACAACGAAACGCTTAC 18470497 18470518 GCTGCGACTGAAATGAAAGGTA 18471139 18471117 NA NA 0 0 NA NA 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P0003212 t3656 M3-1H 1 CAPS t3656.G001 CM3.6.1_pseudomol chr03 TTCCAAACCTCATCCCACTG 2935310 2935329 GACGAAACCCAATTACACCTCTA 2936005 2935983 NA NA 0 0 NA NA 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P0003213 t3656 M34B 1 CAPS t3656.G001 CM3.6.1_pseudomol chr03 TGACCTCACTTCCATGTCTCTAGA 5057538 5057561 GCTTGTTCCTACGGCATCAC 5058178 5058159 NA NA 0 0 NA NA 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P0003214 t3656 M34P 1 CAPS t3656.G001 CM3.6.1_pseudomol chr03 TTGAACTGCTCCCAGATGATCT 10578147 10578168 GTGTTCCTATGGTCAAACCTATCC 10578795 10578772 NA NA 0 0 NA NA 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P0003215 t3656 M4-1H 1 CAPS t3656.G001 CM3.6.1_pseudomol chr04 GTTTGGAAGATGACGTAGTTGACA 341840 341863 TTACGCAATAGTCGTTGGGATT 342446 342425 NA NA 0 0 NA NA 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P0003216 t3656 M4-37P 1 CAPS t3656.G001 CM3.6.1_pseudomol chr04 TGTCTGTGCCACCATCTTATTC 16487234 16487255 CCGCCGTCTTCCTCATCTT 16487708 16487690 NA NA 0 0 NA NA 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P0003217 t3656 M4-39H 1 CAPS t3656.G001 CM3.6.1_pseudomol chr04 CTCCTGTTGCCATGCTTGAT 18487972 18487993 TTCTCCTACCATGCTCATCTCA 18488399 18488380 NA NA 0 0 NA NA 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P0003218 t3656 M4-3P 1 CAPS t3656.G001 CM3.6.1_pseudomol chr04 GGTCCCTCCCCAATTACTACTC 19759566 19759587 GCTATCGTGCTTGGAATCGTT 19760357 19760337 NA NA 0 0 NA NA 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P0003219 t3656 M4-10E 1 CAPS t3656.G001 CM3.6.1_pseudomol chr04 TTTATCGAAATCGGTGGTGTG 32378477 32378497 AAGCTTTAGACTGGGCTTGGT 32379113 32379093 NA NA 0 0 NA NA 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P0003220 t3656 M5-1B 1 CAPS t3656.G001 CM3.6.1_pseudomol chr05 AAGATCAACCTCCCTATATACGATG 3904541 3904565 CTGGACTTTTTGTTAGCTTCACTG 3905203 3905180 NA NA 0 0 NA NA 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P0003221 t3656 M5-12H 1 CAPS t3656.G001 CM3.6.1_pseudomol chr05 CCTTCCTCACTTCTCCACCTAA 26153861 26153882 CGATTCGTCGTGAAAGGGTAC 26154558 26154538 NA NA 0 0 NA NA 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P0003222 t3656 M6-1H 1 CAPS t3656.G001 CM3.6.1_pseudomol chr06 GCCAGGGAGAGACGAGAATAG 550934 550954 CAGTAGGCGAATTAGCGGG 551611 551593 NA NA 0 0 NA NA 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P0003223 t3656 M6-1B 1 CAPS t3656.G001 CM3.6.1_pseudomol chr06 CACAAACCAGAAGCCTGACAG 9043848 9043869 AGAAAGCCTTCATGGACACATT 9044636 9044616 NA NA 0 0 NA NA 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P0003224 t3656 M6-4P 1 CAPS t3656.G001 CM3.6.1_pseudomol chr06 TTGGATATGTAGGCACAACATCC 25055051 25055074 CTAGAATAGAATTGGGGCAACTGT 25055775 25055753 NA NA 0 0 NA NA 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P0003225 t3656 M7-1H 1 CAPS t3656.G001 CM3.6.1_pseudomol chr07 CCATAAGACTGTTGATTTCGCA 606065 606086 TGATAACAACTCTACAGAGCCACC 606821 606798 NA NA 0 0 NA NA 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P0003226 t3656 M8-1P 1 CAPS t3656.G001 CM3.6.1_pseudomol chr08 TACCCCTCAAGCAGACATTCA 8970928 8970948 CCCCATTGACATAATAGTTGCA 8971642 8971621 NA NA 0 0 NA NA 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P0003227 t3656 M8-3E 1 CAPS t3656.G001 CM3.6.1_pseudomol NA ACTGAGCCCATACGCTACAGA 0 0 GTGGCAAGACTGTCGGAACTA 0 0 NA NA 0 0 NA NA 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P0003228 t3656 M9-12P 1 CAPS t3656.G001 CM3.6.1_pseudomol chr09 TCCTGCCCATTTGCTCACT 8746505 8746523 TGATAGTCGCATCAAGGTCATTC 8747002 8746980 NA NA 0 0 NA NA 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P0003229 t3656 M9-10E 1 CAPS t3656.G001 CM3.6.1_pseudomol chr09 GTTGATTCCACATCTCGGTAGT 25158556 25158577 ACACGATGCCATAAGATGAACA 25159028 25159007 NA NA 0 0 NA NA 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P0003230 t3656 M10-1P 1 CAPS t3656.G001 CM3.6.1_pseudomol chr10 CCACGAACTGCTAAGGCTATTT 4497394 4497415 GTTGCCCCCATTATAAGGTG 4498134 4498115 NA NA 0 0 NA NA 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P0003231 t3656 M11-9B 1 CAPS t3656.G001 CM3.6.1_pseudomol NA TCTGATACCAGCAACCTTGCT 0 0 TGCTGCTAGTCGTTACCCAAG 0 0 NA NA 0 0 NA NA 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P0003232 t3656 M11-13H 1 CAPS t3656.G001 CM3.6.1_pseudomol chr11 GCATTTAGGCAGTGGGTTTC 21043682 21043701 AATAGGGTTGACCTGGTGGG 21044451 21044432 NA NA 0 0 NA NA 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P0003233 t3656 M11-14E 1 CAPS t3656.G001 CM3.6.1_pseudomol chr11 CACAAAAGACAACTCCCCATAA 23460157 23460178 GACTTCAGGTACATGCACAATACTG 23460944 23460920 NA NA 0 0 NA NA 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P0003234 t3656 M12-11B 1 CAPS t3656.G001 CM3.6.1_pseudomol chr12 CAAGTCTTTCTTCGTGGCTTCT 17385097 17385118 TCAAATGGGGTTCAGCAAAT 17385792 17385773 NA NA 0 0 NA NA 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P0003411 t3656 NDCS10 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr02 TGCATGTGATAATATGTGTGGCA 14065576 14065598 TGTGCATTTGGTTCATGAGATCT 14066231 14066209 NA NA 0 0 NA NA NA 10.1007/s00122-023-04443-6 37603118 1 Charmono_v1.1 t3656.P0003412 t3656 NDCAPS3 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr02 AGAGGCATTCGACAAGGTGA 14132577 14132596 TCAACTAAGAATGTGCGGCG 14133169 14133150 NA NA 0 0 NA NA NA 10.1007/s00122-023-04443-6 37603118 1 Charmono_v1.1 t3656.P0003413 t3656 NDCS3 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr02 AGTCTGAGGGTCCAAGAAGT 14392421 14392440 GGGCTCCGATACCATGTTTG 14392617 14392598 NA NA 0 0 NA NA NA 10.1007/s00122-023-04443-6 37603118 1 Charmono_v1.1 t3656.P0003414 t3656 NDCAPS6 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr02 GTCTACTCCGGTTCGTCTCA 14586627 14586646 GCTACGACAACCCTCTCCAT 14587351 14587332 NA NA 0 0 NA NA NA 10.1007/s00122-023-04443-6 37603118 1 Charmono_v1.1 t3656.P0003415 t3656 NDCAPS7 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr02 GGGTAGCTGATTTGAGGGTTAA 14796729 14796750 TGAGTTTGCGGGTTTCTTTG 14797293 14797274 NA NA 0 0 NA NA NA 10.1007/s00122-023-04443-6 37603118 1 Charmono_v1.1 t3656.P0003416 t3656 NDCAPS8 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr02 TGCAAGTCCCTCACAAATGT 14921813 14921832 GGGACAAGAAATGGATGGGC 14922355 14922336 NA NA 0 0 NA NA NA 10.1007/s00122-023-04443-6 37603118 1 Charmono_v1.1 t3656.P0003417 t3656 NDCAPS10 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr02 CTAAACCCTTCCCCGAAACG 15081132 15081151 CATTCGGGCAAGGTCTCTTC 15081676 15081657 NA NA 0 0 NA NA NA 10.1007/s00122-023-04443-6 37603118 1 Charmono_v1.1 t3656.P0003420 t3656 NDCAPS 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr02 GGACCAATTGTGAGAGCCAA 14089806 14089825 CCTCCGAGATCACACAGGTT 14090331 14090312 NA NA 0 0 NA NA NA 10.1007/s00122-023-04443-6 37603118 1 Charmono_v1.1 t3656.P0003427 t3656 M1E9-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr01 CGTCTGATTGCTTCAACATT 187605 187624 AGATGAGAACTACTTGGCTATC 188471 188450 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003428 t3656 M1E11-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr01 TTCGGTTGATGCTGTTAGA 2108957 2108973 CTGATGCTGAAGAAGTAGGA 2109576 2109557 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003429 t3656 M1E3-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr01 CTTCATCCTTCCGTGTCTTA 7715893 7715912 ATGTTGTGGTTGGAGATCC 7716572 7716554 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003430 t3656 M1H8-BamH I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr01 TGAGGACGATGAGGAAGAT 13209761 13209779 TTGGAAGCAACCGTGATAT 13210263 13210245 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003431 t3656 M1E7-BamH I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr01 GTTATGATGTCGTAGGAGTTAG 18486726 18486745 TCCACCACTGTCTATCTCA 18487276 18487258 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003432 t3656 M1H5-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr01 GCAAGAAGTAGAGTAGAGGA 22580437 22580456 ATTGTCTGAGAAGTTCAAGC 22581203 22581184 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003433 t3656 M1E4-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr01 TAAACACAACTGGGTAACAC 26453434 26453453 AAGCGTGATTGGTTATTGAG 26454160 26454141 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003434 t3656 M1H6-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr01 GATGGATGTGAAGGAATGGT 28736568 28736587 GCCGATGTGGACAATAGAA 28737325 28737307 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003435 t3656 M1H11-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr01 AATGGACCGAGGTAGATACT 33608515 33608534 GGACGGATTCATAACTATTCAG 33609021 33609000 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003436 t3656 M1E1-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr01 AACATGGAGGAGTGGAAGA 34824728 34824746 ACAATAGAGACCAGAGTTAGAG 34825450 34825429 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003437 t3656 M2E2-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 NA CATAAGTTGAGCCGATATTGG 0 0 CACAGATGTTGCTGCTACT 0 0 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003438 t3656 M2E3-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr02 CGAGCGGAAATATCTTAGTG 2014699 2014718 CACATTGATTGAGACATTGC 2015282 2015263 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003439 t3656 M2H6-Hind III 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr02 GGTCGTTACAGATGTTCTATG 5064950 5064970 GTAGTGAGTCTCTTACAGGATA 5065727 5065706 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003440 t3656 M2E5-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 NA TTCCAGTAAGCAACTACAGT 0 0 GAATCTCAATCCTCCACAAC 0 0 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003441 t3656 M2H11-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr02 GTTCAATTCTCGGTGTTAGC 9906440 9906459 GGTGCCTGATACTATGGATAT 9906871 9906851 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003442 t3656 M2E7-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr02 CATTCATTGGAAGGCGATAG 14921026 14921045 CTCTGTACCTAGTTAGAAGTCA 14921535 14921514 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003443 t3656 M2E12-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr02 CAACGACTAACTACCACCAA 15677405 15677424 TTCTGAGTAGACTGCCAATG 15678047 15678028 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003444 t3656 M2H10-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr02 TAGCATCCATGTCATCAAAC 18709892 18709911 ATGTGTTCAGGCAAGAATG 18710607 18710589 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003445 t3656 M2E1-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr02 GATTTGGACAGCATTTGAAC 22005677 22005696 TCATCTTACCTAAGCCTCAT 22006339 22006320 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003446 t3656 M2H5-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr02 CGACACGACCTTACTTGAA 23988598 23988616 ATCTACAGCAACTGCACTAA 23989286 23989267 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003447 t3656 M3E1-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr03 CAATCACTGCGACATATTCA 3362942 3362961 GTGCTAACTGCCAACAATT 3363571 3363553 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003448 t3656 M3E3-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr03 TCAAGCATAACTCCATAGCA 7405344 7405361 TGTCACTTAGGCGGATAAC 7406085 7406067 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003449 t3656 M3E5-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr03 TGTAGTCCTAACACTTCTCA 8871611 8871630 GTCTCCATCCAACCAGTAA 8872314 8872296 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003450 t3656 M3H2-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 NA TCACTACACAATCGCTTACA 0 0 CGTAGCATAGTAGCAGACAT 0 0 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003451 t3656 M3H6-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr03 ATTGGCAAGTGTTACTCTCA 14070586 14070605 CATCAAACAGATCCTTAGAAGC 14071287 14071266 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003452 t3656 M3E4-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr03 AACACTCATCCAATCAAGGT 21206810 21206829 CCATATAGAGGAAGGACAAGTA 21207357 21207336 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003453 t3656 M3E8-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr03 CCATCTCACATAGTTAAGAGTC 23730273 23730294 TGTTTAGGGCTATCCTAGAA 23730966 23730947 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003454 t3656 M3E10-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr03 CTCCCATTTGAGAGAAACTTAG 25331091 25331112 TCACAAGAATGGAAGATGCT 25331765 25331746 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003455 t3656 M3E7-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr03 GTTTCAACACCGCACAAAT 27502767 27502785 GGTAGTGGTTGCTGTTATGA 27503357 27503338 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003456 t3656 M3H5-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr03 GTTGGTCAACAACAAGTTAG 29848670 29848689 CGACAAGTGTCCAGTAGTA 29849443 29849425 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003457 t3656 M4E2-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr04 CTCGTTCACACTGTCAACT 3241990 3242008 CCTGGAAGAATCACACCTAA 3242502 3242483 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003458 t3656 M4E3-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 NA AACTGACATTCAACATCCG 0 0 GACCAACTGCCAATTACTG 0 0 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003459 t3656 M4E6-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr04 AACAAGTGAGTGGATGATTG 8750365 8750384 TTAGTAGTGGCAGGTTCTC 8751002 8750984 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003460 t3656 M4E7-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr04 AGTATCAAGACACCAAGAGG 12310512 12310531 GCAGTTAAGCTAGACAACAA 12311057 12311038 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003461 t3656 M4H3-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr04 TGGCTTACCTCAGACTACA 16204232 16204250 TGAACACCTACAACGCAAT 16204876 16204858 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003462 t3656 M4H1-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr04 TCATGGATCGTTAGCAACA 21004647 21004665 CTTGGAGGATAACTGTGAATC 21005225 21005205 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003463 t3656 M4E4-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr04 TGCATGTGAGAATCTTAGTCC 23756478 23756498 CCTCCATTCATTATCTGCCATA 23757086 23757065 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003464 t3656 M4E10-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr04 CACTCAAACAACAGTATGCT 30093011 30093030 CAAACTATGGACTATGTCTCTC 30093623 30093602 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003465 t3656 M4E8-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr04 AAGGTTGGTGGAGTGATTG 32287290 32287306 AAGTTGACAGGTAGACAGTAG 32287987 32287967 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003466 t3656 M4H8-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr04 TTGGTAAGTCCTTTCCTGAT 35355206 35355225 GGTGACCTTAGCTCATCTC 35355957 35355939 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003467 t3656 M5H1-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr05 TTGTTGCTGCTGTATCATCT 240205 240224 AGGGAAAGTGAAGAAGAGAAG 240823 240803 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003468 t3656 M5E1-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr05 CGGTGAGATATGCTATGGTT 3036348 3036367 CGTCGGGAGAGTATTTGAA 3037046 3037028 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003469 t3656 M5E3-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 NA AGCGATACTCTCACCTTTG 0 0 CGTATATGACCTTCACTTGAC 0 0 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003470 t3656 M5H3-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr05 CCTCCATGCCATTACACAA 9707845 9707863 GAAGTTGACAGTCCACATTG 9708501 9708482 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003471 t3656 M5E5-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 NA GGTATTGTGCTGGTTGAGA 0 0 TCGTGAGATGTTGTGATAGG 0 0 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003472 t3656 M5E7-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr05 AGATGGTCTTGCTTCTTCC 19954011 19954029 ACTTAATTGACTTGGCTTGG 19954559 19954540 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003473 t3656 M5H7-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr05 TCCAACCTTGACCATCTTA 21664024 21664042 GGTTAGTCATCATTTCTTCC 21664630 21664611 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003474 t3656 M5H9-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr05 AGCCTGAGTTCACTTGTTC 23931226 23931244 CTTCCACATCCTGTTCATAAC 23931877 23931857 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003475 t3656 M5E6-Hind III 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr05 GTGTGGATGACCGTGTATA 26720081 26720099 GACAGCATGTTGTATCAGAA 26720652 26720633 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003476 t3656 M5E9-Hind III 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr05 GAAGGAAAGCCCACTATGT 28659697 28659715 CCTCTATTCAGATTGTCACTC 28660206 28660186 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003477 t3656 M6E1-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr06 CCTGATACCAATTCCAATCC 211055 211074 AGCCACCTCCAACTTATTC 211600 211582 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003478 t3656 M6E3-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr06 TTCTCGGTGAGGAGTGAT 1614328 1614345 GATGTGAACGTCTTCATTGA 1614950 1614931 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003479 t3656 M6H2-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr06 AATGCGGAATCTGAAGCT 3635343 3635360 GTTGACTCCTGACTTCTTATG 3636141 3636121 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003480 t3656 M6E5-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr06 CTGTGTACTAATGGAACTGAG 6162525 6162545 ACCACTGTTAGGTTGGATAA 6163268 6163249 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003481 t3656 M6H1-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr06 CCTACAGTATAAGCAGTGACA 7313748 7313768 AGTGAGAACCTTGAGGAGTA 7314362 7314343 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003482 t3656 M6E4-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr06 GGCATATAGACCAAGATGAC 8341726 8341745 AAGATCGCTGACATTGAGA 8342389 8342371 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003483 t3656 M6E6-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr06 GAGGTAGCCATTCTATCTTGA 11702555 11702575 CTTGCTCGACTCCTAACATA 11703180 11703161 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003484 t3656 M6E7-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr06 GAGAGGAGTTAAGGAGAGTTA 14198659 14198679 GACAGATCACAGATGCTATAC 14199402 14199383 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003485 t3656 M6E9-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr06 CCTATCAACTCGTGCTTCT 18259300 18259318 AGATGAACTCGCAACCAAT 18259924 18259906 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003486 t3656 M6H4-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr06 GCGTAATCATTAGGCGAAT 22968133 22968151 TTCTCAACTCCTTCACCAA 22968672 22968654 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003487 t3656 M6H7-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 NA TAGGATCACGATATAGGAAGAG 0 0 CGAGGAGTTATTGCTACTAATC 0 0 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003488 t3656 M6E8-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr06 TTGCTTCTCAGGATTAGTCT 29920359 29920378 AACCAACCGAATACAAGATG 29921046 29921027 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003489 t3656 M6E13-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr06 CATCCACCATCAACACCTA 33100718 33100737 ATCCAACCAACCAATACCTA 33101363 33101345 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003490 t3656 M6A-Hind III 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr06 CTCATACTCCTGAATGTCTCT 22048498 22048517 CTTCCATAGTTACGCAATCA 22049166 22049146 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003491 t3656 M6B-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr06 GATTTGGGTCACGATTATGT 20694330 20694349 GGAATTGAGAACGATGAGAG 20694867 20694848 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003492 t3656 M8C-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr06 GGAGAGTACGAGTTAAGAGAC 19896782 19896800 GGAAGGTTGAGTGTTGGAT 19897553 19897533 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003493 t3656 M6D-Hind III 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr06 ATATACGAGGAGTAGGAAGG 18806683 18806701 GGCTTACTATCTGCTGAAG 18807512 18807493 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003494 t3656 M6E-Hind III 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr06 GAGATTCGTGTACGTGTATG 26646027 26646046 GGCTTTAATTGGTGGTTCTT 26646790 26646771 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003495 t3656 M7E1-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr07 CCTTCGTAAGAACTCTCACC 281299 281318 GAACCACTGTACCAAGTATATG 281940 281919 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003496 t3656 M7E3-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr07 TGCAACTCTACTTCCTACAA 5199202 5199221 AGTATTATGGCTCGGTGAA 5199798 5199780 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003497 t3656 M7H2-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr07 TCTCGTAATTCTTGGTCTGT 8076729 8076748 CTTCCTCTAACTCATCATCAC 8077512 8077492 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003498 t3656 M7H3-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr07 TGTGCCAGTTGATCTCTTG 11032602 11032620 GGTAATCCAGTTCAGTGCTT 11033439 11033420 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003499 t3656 M7E5-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr07 CCTTCGCTGGTTATCATCTA 13794933 13794952 TTGTGCCTATGGGAATACG 13795646 13795628 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003500 t3656 M7H6-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr07 AGGCGTTCTGATATTCTCTT 16543176 16543195 TCCGTCTCTTGTAGTGGTA 16543812 16543794 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003501 t3656 M7E6-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr07 ATCTTGGATGGTATGCTGAA 19877957 19877975 CTTGTGCTAGACGAAGGAA 19878694 19878675 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003502 t3656 M7E9-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr07 CGTTGGATATGAACCATTGT 23480998 23481017 CAGTTCGGTATAGTTGTTGAC 23481550 23481530 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003503 t3656 M7H8-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr07 CGCCTTGATTAGACCTTGA 24405355 24405373 ACACTGTTGGATGGTAAGC 24406034 24406016 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003504 t3656 M8B1-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr08 GTAGCAACATGGAACGGAACC 698733 698753 GCCAGCAACGATGAGTTACTT 699637 699617 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003505 t3656 M8E2-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr08 AATCCTGGGCATCTGGTGAG 3769812 3769831 GGCTCCATTGTTGTAATCTGGTT 3770662 3770640 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003506 t3656 M8E4-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr08 GCACTAGACAATATTCGCTAAGTTC 6722178 6722202 CCTGAGCCAAGCCTCTGTT 6722905 6722887 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003507 t3656 M8E5-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 NA CTGAAGACTAGGCTTTAACCACAA 0 0 GCATCCGCTGTTATTCTCACTA 0 0 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003508 t3656 M8H3-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr08 TTACCTGAGATAGCTGCTGTGT 19978344 19978365 GATTCTGAACATGGTCTTCATCTTC 19979176 19979152 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003509 t3656 M8H6-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr08 GGTGTTGAATCTTGTTCACTCTATG 27197374 27197398 AGTTGTTATGGTGGTTGTCTCA 27198186 27198165 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003510 t3656 M8E8-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr08 CGAGTTAGTCTCTACCACCATT 29811385 29811406 ACCACCAAGAATATGAGTATGC 29812266 29812245 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003511 t3656 M8H1-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr08 CATCATGTCTGAAGGATAAGTTGAG 32106381 32106405 CGATCAGGCAATTCTGGAATAAG 32107224 32107202 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003512 t3656 M9E2-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr09 ACATCTTCTCATTTCCTCCA 167770 167789 GGACTCGTACAACAATCAAT 168481 168462 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003513 t3656 M9E3-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr09 CATCAGGAACACTATCTCATTG 3066911 3066932 TAACCTCTATCGTCAGTCTAAG 3067487 3067466 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003514 t3656 M9H3-Hind III 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr09 TGGATAGACCGACATGGAA 6293410 6293428 TTGTTGAATGCCTGATTGAC 6294169 6294151 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003515 t3656 M9H4-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr09 TTGAGTCAATCTAGGTCCAA 9834338 9834357 CCATCATTTGCTACAGAACT 9835113 9835094 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003516 t3656 M9E5-Hind III 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr09 CGTCTGTTGAGATAACTTGAG 14035385 14035405 CATACCCTAAGCGTTCTTTG 14035946 14035927 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003517 t3656 M9H1-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr09 GGTGCTTGTGATGGATTAAC 15728953 15728972 AGAGTTCTTAATGGCAGAGG 15729646 15729627 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003518 t3656 M9E6-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr09 TCTTCAGCAATTAGGTACTCC 18972357 18972377 TGGTGTTGATGTAAGTGGAA 18973111 18973092 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003519 t3656 M9E7-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr09 AGCATTCCAACAAGGTAGAT 20811439 20811458 ATAGAGATATAGGACGACCATC 20812063 20812042 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003520 t3656 M9H8-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr09 GCATTCTAACGACCACACT 22707330 22707348 GCTCACAATGTCAGTCTCA 22707951 22707933 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003521 t3656 M10E2-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr10 CGTCACACTTACTACATAAGC 541354 541374 CGTCCAGATTCACTCATTCT 541939 541920 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003522 t3656 M10H1-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr10 GGTCACCAACACTTCATAATC 3777198 3777218 TCAATAAGTTCCCACCCTATC 3777897 3777877 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003523 t3656 M10E3-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr10 CCCTGACCATCTTTATCCTTA 5889515 5889535 CCTAACTTGTCGTGGAACT 5890217 5890199 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003524 t3656 M10H4-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr10 GGTTGTTATTCACTCTCTACTC 8227315 8227336 CTGTACTGCTACTACATACGA 8228133 8228113 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003525 t3656 M10E5-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr10 GGAGGAAATGGGTTTGGAT 9885872 9885890 GGTACTCTATTCTAGCTTAGGT 9886662 9886641 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003526 t3656 M10H6-Hind III 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr10 TGGATGGCTATGAAAGTTTG 12227052 12227071 CTGAAGGGTGCTTAGATTATG 12227788 12227768 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003527 t3656 M10H7-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr10 AACACATATCACCGACAACT 19765536 19765554 TGCGAAATTGGGTAACTCA 19766107 19766088 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003528 t3656 M10E7-Hind III 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr04 CCATCAAATCTCTCGCAATA 25988120 25988139 TGTGAGGCTAATGTAATGAG 25988906 25988887 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003529 t3656 M11E3-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 NA ACCGTTGACTAATGATGGAT 0 0 TCCTCCTTTCTCTGATGTTT 0 0 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003530 t3656 M11E2-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr11 ATAGTGGTTCAGCAAGTTG 6086544 6086563 AAGCCTATCACTCATTCTCA 6087209 6087191 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003531 t3656 M11E4-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 NA GTGATCTATCGTACTGGCTT 0 0 GGGAGAAACACAACTCTTAGA 0 0 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003532 t3656 M11H3-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr11 TATGCTCAACCAAGTGGAT 12037093 12037111 CTATGTTCTGTATGCACCTT 12037754 12037735 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003533 t3656 M11E5-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr11 TAATCGCAACTCACCTAACT 14784132 14784151 TGGAGTGAAGAATGAGACAA 14784853 14784834 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003534 t3656 M11E7-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr11 GTACAGGCATGAGAGTAGG 17272026 17272044 GCTCCAACGATCCAAGTT 17272705 17272688 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003535 t3656 M11E9-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr11 TGGAGATGTCAGGTTGTG 20099648 20099665 TGATGTTGAGAGTGTTCTAC 20100286 20100267 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003536 t3656 M11E10-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr11 TGGTTAATGGAGAAGGCTTA 28579110 28579129 CAATTCAGCGTTAGGTGATT 28579683 28579664 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003537 t3656 M11H6-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr11 CAGTATCCATCTACAGAGTCA 30489029 30489049 AACCTGCTATGCTATTGCTA 30489630 30489611 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003538 t3656 M12E2-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 CTCTAAGGCTAACGACCATT 572968 572987 CACGACCACATGATCTTGA 573694 573676 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003539 t3656 M12E3-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 ATAGTTCACGATGACCATCT 3525482 3525501 GAGGATATAGCAGAGAATCTTC 3526117 3526096 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003540 t3656 M12H2-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 GAGAACCCAATATCCCAAGT 6912181 6912200 GCATTGTTGACAGCGTATT 6912794 6912776 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003541 t3656 M12E4-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 CAACTTCATACCTACTCATTCC 9652558 9652579 CGAACATGCCTGCTATACA 9653342 9653324 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003542 t3656 M12E6-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 CGGGTAAATGTTAGGTTTGG 12166984 12167003 GTGTTTGATGATGACTTCTGG 12167666 12167646 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003543 t3656 M12H7-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 CTCACAGTCAACTTCTAAGC 15542783 15542802 AACGAGATGTCCTCAACTC 15543316 15543298 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003544 t3656 M12H3-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 TTCTTCTAACTGCCTCGTT 16622347 16622365 GTAGCTTCCGTATAATCATCC 16622972 16622952 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003545 t3656 M12E8-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 GCTTGTGAGAAGAACTAACC 20095229 20095248 GTTGTCCTTGTGAATACGC 20095884 20095868 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003546 t3656 M12E9-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 AGACGGTTATCGGAACTTAG 22436182 22436201 GAGGAGGAGTCAATATCAGAT 22436777 22436757 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003547 t3656 M12E5-EcoR I 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 CCAATTCGTACTCCACTGA 25266180 25266198 ATAGACATGACCACCAAGTT 25266859 25266840 NA NA 0 0 NA NA NA 10.3390/cimb45040224 37185748 1 Charmono_v1.1 t3656.P0003604 t3656 CHR12PM1 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 GCATTATGAAGCAGAGATTGTAAGG 22428281 22428305 GTGAAGTCAACCACATTGAGTAAG 22429063 22429040 NA NA 0 0 NA ScaI NA 10.1007/s00122-023-04269-2 36651949 1 Charmono_v1.1 t3656.P0003605 t3656 CHR12PM2 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 TGTGCCAGTGCCAGATTGAT 22981330 22981349 AGAAATAGAGTGGGAGTGGAGTT 22981991 22981969 NA NA 0 0 NA TaqI NA 10.1007/s00122-023-04269-2 36651949 1 Charmono_v1.1 t3656.P0003606 t3656 CHR12PM3 1 CAPS t3656.G005 Charmono_v1.1 NA CTTACTCTCAAGCAATGAACGGTAT 0 0 TTAGGTGGAATTGGTTGGAACATAG 0 0 NA NA 0 0 NA HindII NA 10.1007/s00122-023-04269-2 36651949 1 Charmono_v1.1 t3656.P0003607 t3656 CHR12PM4 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 GACAGCCGTACTTCACTACAG 23034825 23034845 CCACTGATGTGCCAAGACTG 23035577 23035558 NA NA 0 0 NA ScaI NA 10.1007/s00122-023-04269-2 36651949 1 Charmono_v1.1 t3656.P0003608 t3656 CHR12PM5 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 TACTAGGTGAAGTTGGTGTGTG 23074980 23075000 AGTGTTGAGTGAGACCAGAGG 23075571 23075551 NA NA 0 0 NA HindII NA 10.1007/s00122-023-04269-2 36651949 1 Charmono_v1.1 t3656.P0003609 t3656 CHR12PM6 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 TCACGGATGGATAAATGAAGGATG 23313346 23313369 ACGCATAGAACTAGCCACACT 23314040 23314020 NA NA 0 0 NA MspI NA 10.1007/s00122-023-04269-2 36651949 1 Charmono_v1.1 t3656.P0003610 t3656 CHR12PM7 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 AATGCTTCTGGTAAGTCTGACTC 23315361 23315383 CTTCTGAATAACTGAGGAGAGGTAG 23315951 23315927 NA NA 0 0 NA DraI NA 10.1007/s00122-023-04269-2 36651949 1 Charmono_v1.1 t3656.P0003611 t3656 CHR12PM8 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 AACCACGCCGCAGTTGAA 23579118 23579135 AGCATATCAGTACGCACAGAGA 23579657 23579636 NA NA 0 0 NA AseI NA 10.1007/s00122-023-04269-2 36651949 1 Charmono_v1.1 t3656.P0003612 t3656 CHR12PM9 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 CCTTTAATCCTCAAATCCAACCAAG 23651353 23651377 AGCACTTACGATGATACCTCCT 23651976 23651955 NA NA 0 0 NA MspI NA 10.1007/s00122-023-04269-2 36651949 1 Charmono_v1.1 t3656.P0003613 t3656 CHR12PM10 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 CAGTAAGGCACGAGTTGTCAA 23863725 23863745 GCATCCGCACTTCAGGTATT 23864282 23864263 NA NA 0 0 NA EcoRI NA 10.1007/s00122-023-04269-2 36651949 1 Charmono_v1.1 t3656.P0003614 t3656 CHR12PM11 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 AGAGGCTTTGTAATGAGATTGC 24019324 24019345 AATGGCTTCCCAACAACAATTC 24019825 24019804 NA NA 0 0 NA HindIII NA 10.1007/s00122-023-04269-2 36651949 1 Charmono_v1.1 t3656.P0003615 t3656 CHR12PM12 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 ATCGCCAGAACGCAAAGAAC 24207948 24207967 CCACCACCATCCTCTCAACA 24208495 24208476 NA NA 0 0 NA DraI NA 10.1007/s00122-023-04269-2 36651949 1 Charmono_v1.1 t3656.P0003616 t3656 CHR12PM13 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 AATAGCGGTAATGCCAATGTCA 24371613 24371634 CAGGAGCAGGTAGATACTTAGAGA 24372323 24372300 NA NA 0 0 NA ScaI NA 10.1007/s00122-023-04269-2 36651949 1 Charmono_v1.1 t3656.P0003617 t3656 CHR12PM14 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 GAGACGAACCTTGATTCTGTGT 24724250 24724271 TTAGTAATCGGTCCTGGTCCTG 24725066 24725045 NA NA 0 0 NA HindII NA 10.1007/s00122-023-04269-2 36651949 1 Charmono_v1.1 t3656.P0003618 t3656 CHR12PM15 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 CCAACACTCAACATTGTACTACTC 25147705 25147728 GACATCTCAGGACAGGCATTG 25148233 25148213 NA NA 0 0 NA SacI NA 10.1007/s00122-023-04269-2 36651949 1 Charmono_v1.1 t3656.P0003632 t3656 SNP34 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr05 ATGCTCGACTTCTCGGTGTT 3564376 3564395 CGGAGGTCGTCTACCAAGTT 3564607 3564588 NA NA 0 0 NA MseI NA 10.3389/fpls.2022.925081 36046593 1 Charmono_v1.1 t3656.P0003633 t3656 SNP35 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr05 TGGTTCTTGTGGTTTGGAGA 3658380 3658399 TCATGGAAAATGCACAGGAA 3658661 3658642 NA NA 0 0 NA MseI NA 10.3389/fpls.2022.925081 36046593 1 Charmono_v1.1 t3656.P0003634 t3656 SNP50 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr05 GGAGATGTTCGAATGCACCT 5167385 5167404 CGTGGGAGCTACAAATGTGA 5167645 5167626 NA NA 0 0 NA MseI NA 10.3389/fpls.2022.925081 36046593 1 Charmono_v1.1 t3656.P0003635 t3656 SNP53 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr05 CACAGGAAAGCAGAACAAAGTG 5168287 5168308 TGTTCTACACAGCGGTAATGC 5168479 5168459 NA NA 0 0 NA MseI NA 10.3389/fpls.2022.925081 36046593 1 Charmono_v1.1 t3656.P0003636 t3656 SNP54 1 CAPS t3656.G005 Charmono_v1.1 NA CTACCACTCGTCACTCGCTG 0 0 CAACAATGTGATTTTAGGGCAA 0 0 NA NA 0 0 NA MseI NA 10.3389/fpls.2022.925081 36046593 1 Charmono_v1.1 t3656.P0003637 t3656 SNP60 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr05 ATGTCACTTGTCTCGGCATC 5200783 5200802 TTGGACACTCCCTCTCTTTCTC 5201082 5201061 NA NA 0 0 NA EcoRI NA 10.3389/fpls.2022.925081 36046593 1 Charmono_v1.1 t3656.P0003638 t3656 SNP69 1 CAPS t3656.G005 Charmono_v1.1 NA CTCTTGTTTTTCGGCTGAGG 0 0 ATTGGGATTGGGAGTTTTCC 0 0 NA NA 0 0 NA SpeI NA 10.3389/fpls.2022.925081 36046593 1 Charmono_v1.1 t3656.P0003639 t3656 SNP76 1 CAPS t3656.G005 Charmono_v1.1 NA GGAAAACTCCCAATCCCAAT 0 0 AAGGTTGACAATTCCGATGC 0 0 NA NA 0 0 NA NlaIII NA 10.3389/fpls.2022.925081 36046593 1 Charmono_v1.1 t3656.P0003640 t3656 S2BC1 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr02 GCAACAACCAATATCACACCAT 2846019 2846040 GCTCAGAGGCTAGAGATTATTCAA 2846609 2846586 NA NA 0 0 NA BamI NA 10.3389/fpls.2022.865082 35615137 1 Charmono_v1.1 t3656.P0003641 t3656 S2E-6 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr02 GTGTAAGTAAGAGATTGATGAGAGG 5527101 5527125 TGGTTACCAACTCGAAGCTAA 5527712 5527692 NA NA 0 0 NA EcoRI NA 10.3389/fpls.2022.865082 35615137 1 Charmono_v1.1 t3656.P0003642 t3656 S2H-4 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr02 TGTACCTCTGTAATTCTTCGGATG 18916159 18916182 TGTAACAACCCACACAAACTCA 18916493 18916472 NA NA 0 0 NA HindIII NA 10.3389/fpls.2022.865082 35615137 1 Charmono_v1.1 t3656.P0003643 t3656 S2M3 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr02 CTTCTTCTATGATGGCTACAGTCTT 10608516 10608540 CGAGATGGTTGCTATCCTTGG 10609301 10609281 NA NA 0 0 NA PstI NA 10.3389/fpls.2022.865082 35615137 1 Charmono_v1.1 t3656.P0003644 t3656 S2B1-2 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr02 TGGACAACATGCACATTACACT 20140071 20140092 AAGGTCGAAGATCATCTCCGTAT 20140573 20140551 NA NA 0 0 NA BclI NA 10.3389/fpls.2022.865082 35615137 1 Charmono_v1.1 t3656.P0003645 t3656 S8H9 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr08 TTTCAACCCACACTCTCATCTTC 3204582 3204604 CTCAATTATTTCCCTCTCCTACCC 3205413 3205390 NA NA 0 0 NA HindIII NA 10.3389/fpls.2022.865082 35615137 1 Charmono_v1.1 t3656.P0003646 t3656 S8BC6 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr08 TGGTAAGAGTAGGACAACATATAGG 32403201 32403225 GGAATATACGTTCACTCCATCAAC 32403855 32403832 NA NA 0 0 NA BclI NA 10.3389/fpls.2022.865082 35615137 1 Charmono_v1.1 t3656.P0003647 t3656 S8H-1 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr08 GCATGATAGTGATGTAGGTGAGAA 30934012 30934035 GTTCGGAATGGGAAAGAAGGTT 30934639 30934618 NA NA 0 0 NA HindIII NA 10.3389/fpls.2022.865082 35615137 1 Charmono_v1.1 t3656.P0003648 t3656 S8E-1 1 CAPS t3656.G005 Charmono_v1.1 NA AGAAGGAGATGAATCAAGTCTA 0 0 TGTACCATACGCAATCGTTAGTCG 0 0 NA NA 0 0 NA EcoRI NA 10.3389/fpls.2022.865082 35615137 1 Charmono_v1.1 t3656.P0003649 t3656 S8S1 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr08 CCGTTCATCACACTCCACAAG 23750284 23750304 GCGAAGTAATCCTATAACAGTCATC 23751120 23751096 NA NA 0 0 NA PstI NA 10.3389/fpls.2022.865082 35615137 1 Charmono_v1.1 t3656.P0003656 t3656 PM12-V1. 1 CAPS t3656.G005 Charmono_v1.1 NA ATCCTTAGGGAGTTGTAGTTG 0 0 GGCTGAGCACAGATAGTT 0 0 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003657 t3656 PM12-V2 1 CAPS t3656.G005 Charmono_v1.1 NA GGCTGAGCACAGATAGTT 0 0 TCAAGGCGAAGATATTGAGCAA 0 0 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003658 t3656 PM12-V3 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 GGCTGAGCACAGATAGTT 20845756 20845773 GCTTCTCCAGTATGTAATCC 20846281 20846262 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003659 t3656 PM12-V4 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 GGTACGACCTATCCAATAAGT 21838123 21838143 TACTCACAGTTGAGGCATAA 21838825 21838806 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003660 t3656 PM12-V5 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 ACGAAGAGATAGCAACTCAA 22281283 22281301 CACTACCCTACAATAAGACAAC 22282138 22282117 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003661 t3656 PM12-V6 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 CTACTAACACTACCATCCAATC 22527774 22527795 CCTCTCCACTACGACACA 22528478 22528461 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003662 t3656 PM12-V7 1 CAPS t3656.G005 Charmono_v1.1 NA ACATTGGAAGTTAGGAGGTT 0 0 GAGAAGAAGAAGAAGAAGAAGG 0 0 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003663 t3656 PM12-V8 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 AACACCTTGAACAAGTATGC 23155557 23155576 CGCTATGCCGAACAAGAT 23156108 23156091 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003664 t3656 PM12-V9 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 TGGATGGACATCTCTTGGA 23314567 23314585 GGCTTGCTTGACTACTGAA 23315213 23315195 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003665 t3656 PM12-V10 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 AATGTTGGTAGGCATCGAA 23550945 23550963 AAATGTGTGGTACAGACTCA 23551469 23551450 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003666 t3656 PM12-V11 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 AACCTTACCACACCAATCTT 24083737 24083756 CCACTCCTCTAATAACATCAAC 24084293 24084272 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003667 t3656 PM12-V12 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 CACACCACTACATCACAAC 24594266 24594284 GCACTCAAGCATTAGATACC 24594909 24594890 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003668 t3656 PM12-V13 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 TTGTTTCCTCGTTCGTCTT 25260439 25260457 TTCTGCCTCCTGTCTTCA 25261147 25261130 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003669 t3656 PM12R-1 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 GGTACGACCTATCCAATAAGT 21838123 21838143 TACTCACAGTTGAGGCATAA 21838825 21838806 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003670 t3656 PM12R-2 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 ACGAAGAGATAGCAACTCAA 22281283 22281301 CACTACCCTACAATAAGACAAC 22282138 22282117 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003671 t3656 PM12R-3 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 CTACTAACACTACCATCCAATC 22527774 22527795 CCTCTCCACTACGACACA 22528478 22528461 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003672 t3656 PM12R-4 1 CAPS t3656.G005 Charmono_v1.1 NA ACATTGGAAGTTAGGAGGTT 0 0 GAGAAGAAGAAGAAGAAGAAGG 0 0 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003673 t3656 PM12R-5 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 GCCAACTAAGAGAATGTTCA 23012640 23012659 AATGCTGGAGATGCTGTC 23013583 23013566 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003674 t3656 PM12R-6 1 CAPS t3656.G005 Charmono_v1.1 NA TATACCTCATCATCTCACTCC 0 0 TGGTCGGTGTTGATACTAC 0 0 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003675 t3656 PM12R-7 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 AACACCTTGAACAAGTATGC 23155557 23155576 CGCTATGCCGAACAAGAT 23156108 23156091 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003676 t3656 PM12R-8 1 CAPS t3656.G005 Charmono_v1.1 NA TGGATTACCTTAGTCGTCTC 0 0 CCAGCTAGTGTGATGAGTTA 0 0 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003677 t3656 PM12R-9 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 TGGATGGACATCTCTTGGA 23314567 23314585 GGCTTGCTTGACTACTGAA 23315213 23315195 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003678 t3656 PM12R-10 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 GTGTATCTAGGTTATTGGAGTG 23367074 23367095 CCAGCTAGTGTGATGAGTTA 23367769 23367750 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003679 t3656 PM12R-11 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 GGATTGGTGTGATTAAGTGT 23453133 23453152 CCTTGTTCCGATTGATATGT 23453674 23453655 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003680 t3656 PM12R-12 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 CCATCTCTTCCTGTGTCAA 23497432 23497450 TTAATAGGTGGCTACTCTCG 23498050 23498031 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003681 t3656 PM12R-AD1 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 TTCAAGTGCTCGTGACTC 23017687 23017704 CTTCATACATCCTCCGCATA 23018564 23018545 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003682 t3656 PM12R-AD2 1 CAPS t3656.G005 Charmono_v1.1 NA GTCTCGCTTAATTGAACACT 0 0 GAGTCTTCCTAATAATCTCTGG 0 0 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003683 t3656 PM12R-AD3 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 GGCAGTTGATTAGTTGAGTC 23054738 23054757 CTGAGGCAAGTTCATCGT 23055273 23055256 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003684 t3656 PM12R-AD4 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 ACTGTAGTGTAGTTGGAAGT 23076590 23076609 CTCTAGGTGCGATGGTTC 23077211 23077194 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003685 t3656 PM12R-AD5 1 CAPS t3656.G005 Charmono_v1.1 NA ATTGGCATTGGCAAGTTG 0 0 GTCATAATCTCTCCCTCAAAC 0 0 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003686 t3656 PM12R-AD6 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr12 CCATCCTGTTCAACACCAT 23135625 23135643 GAATAAGAAGATCCAACCTGTG 23136434 23136413 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003687 t3656 PM10-V1. 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr10 CGTGGTTCTGAGGACTAAG 218019 218037 TCTTGAGGGCGTTTGATG 218684 218667 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003688 t3656 PM10-V2 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr10 TCATTCCGTAACTCCGTAAT 298938 298957 TGCCAGAATTGCCTTCC 299714 299698 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003689 t3656 PM10-V3 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr10 TTCCCATCGCTCAAAGG 551560 551576 GATACCTAGTGTAAGATCCTAC 552117 552096 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003690 t3656 PM10-V4 1 CAPS t3656.G005 Charmono_v1.1 NA GTATGTCCTCCTCTTCTCAA 0 0 AGTCAGTCAATGTCACCAA 0 0 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003691 t3656 PM10-V5 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr10 TATCCGATTGTTATGTTGGC 942424 942443 CGAAGAAGGTGAGCAGTAA 943078 943060 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003692 t3656 PM10-V6 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr10 TCGCCTTGTTCTCCTCTAA 1269585 1269603 CTTCAACAGTAACGATTCTAGG 1270232 1270211 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003693 t3656 PM10-V7 1 CAPS t3656.G005 Charmono_v1.1 NA GTATGTCCTCCTCTTCTCAA 0 0 AGTCAGTCAATGTCACCAA 0 0 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003694 t3656 PM10-V8 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr10 CTTGAGTCATGGTCCTTCC 2239915 2239933 ATGGCACTACACATTCTGAA 2240593 2240574 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003695 t3656 PM10-V9 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr10 CTCCAGTTATTCCAAGCATAAG 2300865 2300886 CGTCATCTACACAGGTTCAT 2301370 2301351 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003696 t3656 PM10-V10 1 CAPS t3656.G005 Charmono_v1.1 NA TGATTCATCAGGCAGAACA 0 0 CCTTACAACAACAGACAACA 0 0 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003697 t3656 PM10-V11 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr10 GACGAGGTTCTACAGTTATTG 2552581 2552601 GTATGCCAGGAAGTGCTAA 2553140 2553122 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003698 t3656 PM10-V12 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr10 GGTAAGGAATGGATGGAACT 2680578 2680597 TGGAATCTCGCACTTCTATT 2681444 2681425 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003699 t3656 PM10m-2 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr10 GGAAGTGAAGAAGGAAGGAA 451274 451293 CCCACGTTGAGTACATTTAC 452031 452012 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003700 t3656 PM10m-4 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr10 TGGTTGAGAGCTTCATAGAT 659477 659496 CCAAATGATTAGGTGTAGATGG 660045 660024 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003701 t3656 PM10m-5 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr10 CAATCCTGGCATACATTATCC 745907 745927 CACTGTCACTATGGCTCAC 746685 746667 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003702 t3656 PM10m-7 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr10 GGACTACTTCTCATAGACAGA 1102276 1102296 GGTGCTTGTATGTAAGATGT 1102931 1102912 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003703 t3656 PM10m-9 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr10 GGAGATGGAGCAGAAGTT 1524656 1524673 ACTGTCTACCACAATACAAC 1525300 1525281 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003704 t3656 PM10m-11 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr10 ACGCTCAAGAATCCTCATC 1920373 1920391 TCATCTGCCTCCTTCATTG 1920915 1920897 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003705 t3656 PM10m-AD1 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr10 TGGTTGAGAGCTTCATAGAT 659477 659496 CCAAATGATTAGGTGTAGATGG 660045 660024 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003706 t3656 PM10m-AD2 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr10 GCTTAACAATACGAGGTCTT 683068 683087 AGAGGAATCTCATCATCTCC 683593 683574 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003707 t3656 PM10m-AD3 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr10 AAGCAGTCAAGCACCAAT 728881 728898 TCGGGTTTCCACATAATTTG 729504 729485 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003708 t3656 PM10m-AD4 1 CAPS t3656.G005 Charmono_v1.1 CMiso1.1chr10 CAATCCTGGCATACATTATCC 745907 745927 CACTGTCACTATGGCTCAC 746685 746667 NA NA 0 0 NA NA NA 10.1007/s00122-021-04025-4 34989827 1 Charmono_v1.1 t3656.P0003947 t3656 SNP687014-G/A 1 dCAPS t3656.G005 Charmono_v1.1 CMiso1.1chr04 CCCTATCATGTGTGTGTTCTCC 542708 542729 TCACAATTTTTGCTAGAACTGAACAAG 542905 542880 NA NA 0 0 198/174 NA NA NA 10.1590/1678-4685-GMB-2024-0062 1 Charmono_v1.1 t3656.P001728.1 t3656 M16H 1 CAPS t3656.G001 CM3.6.1_pseudomol chr01 TCCCAATAATCTGCAACCAAG 2018636 2018656 CCTACTTCAAACTGCTGCTCATA 2019353 2019331 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P001729.1 t3656 M14H 1 CAPS t3656.G001 CM3.6.1_pseudomol chr01 CAAATGTAGAGGACACAAGGAAGAT 17923137 17923161 AAGCAGGTGGTTCAGGAGGT 17923837 17923818 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P001730.1 t3656 M28E 1 CAPS t3656.G001 CM3.6.1_pseudomol chr02 AGGCATACTATGAAGATGAGACCG 13740304 13740327 GGAATTTGGAGATGATGGGAGT 13741049 13741028 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P001731.1 t3656 M24P 1 CAPS t3656.G001 CM3.6.1_pseudomol chr02 GCTGCGACTGAAATGAAAGGTA 18470497 18470518 TCACTCAACAACGAAACGCTTAC 18471139 18471117 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P001732.1 t3656 M3-1H 1 CAPS t3656.G001 CM3.6.1_pseudomol chr03 TTCCAAACCTCATCCCACTG 2935310 2935329 GACGAAACCCAATTACACCTCTA 2936005 2935983 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P001733.1 t3656 M34B 1 CAPS t3656.G001 CM3.6.1_pseudomol chr03 TGACCTCACTTCCATGTCTCTAGA 5057538 5057561 GCTTGTTCCTACGGCATCAC 5058178 5058159 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P001734.1 t3656 M34P 1 CAPS t3656.G001 CM3.6.1_pseudomol chr03 TTGAACTGCTCCCAGATGATCT 10578147 10578168 GTGTTCCTATGGTCAAACCTATCC 10578795 10578772 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P001735.1 t3656 M4-1H 1 CAPS t3656.G001 CM3.6.1_pseudomol chr04 GTTTGGAAGATGACGTAGTTGACA 341840 341863 TTACGCAATAGTCGTTGGGATT 342446 342425 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P001736.1 t3656 M4-37P 1 CAPS t3656.G001 CM3.6.1_pseudomol chr04 TGTCTGTGCCACCATCTTATTC 16487234 16487255 CCGCCGTCTTCCTCATCTT 16487708 16487690 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P001737.1 t3656 M4-39H 1 CAPS t3656.G001 CM3.6.1_pseudomol chr04 TTCTCCTACCATGCTCATCTCA 18487972 18487993 CTCCTGTTGCCATGCTTGAT 18488399 18488380 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P001738.1 t3656 M4-3P 1 CAPS t3656.G001 CM3.6.1_pseudomol chr04 GGTCCCTCCCCAATTACTACTC 19759566 19759587 GCTATCGTGCTTGGAATCGTT 19760357 19760337 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P001739.1 t3656 M4-10E 1 CAPS t3656.G001 CM3.6.1_pseudomol chr04 TTTATCGAAATCGGTGGTGTG 32378477 32378497 AAGCTTTAGACTGGGCTTGGT 32379113 32379093 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P001740.1 t3656 M5-1B 1 CAPS t3656.G001 CM3.6.1_pseudomol chr05 AAGATCAACCTCCCTATATACGATG 3904541 3904565 CTGGACTTTTTGTTAGCTTCACTG 3905203 3905180 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P001741.1 t3656 M5-12H 1 CAPS t3656.G001 CM3.6.1_pseudomol chr05 CCTTCCTCACTTCTCCACCTAA 26153861 26153882 CGATTCGTCGTGAAAGGGTAC 26154558 26154538 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P001742.1 t3656 M6-1H 1 CAPS t3656.G001 CM3.6.1_pseudomol chr06 GCCAGGGAGAGACGAGAATAG 550934 550954 CAGTAGGCGAATTAGCGGG 551611 551593 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P001743.1 t3656 M6-1B 1 CAPS t3656.G001 CM3.6.1_pseudomol chr06 AGAAAGCCTTCATGGACACATT 9043848 9043869 CACAAACCAGAAGCCTGACAG 9044636 9044616 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P001744.1 t3656 M6-4P 1 CAPS t3656.G001 CM3.6.1_pseudomol chr06 CTAGAATAGAATTGGGGCAACTGT 25055051 25055074 TTGGATATGTAGGCACAACATCC 25055775 25055753 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P001745.1 t3656 M7-1H 1 CAPS t3656.G001 CM3.6.1_pseudomol chr07 CCATAAGACTGTTGATTTCGCA 606065 606086 TGATAACAACTCTACAGAGCCACC 606821 606798 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P001746.1 t3656 M8-1P 1 CAPS t3656.G001 CM3.6.1_pseudomol chr08 TACCCCTCAAGCAGACATTCA 8970928 8970948 CCCCATTGACATAATAGTTGCA 8971642 8971621 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P001747.1 t3656 M9-12P 1 CAPS t3656.G001 CM3.6.1_pseudomol chr09 TCCTGCCCATTTGCTCACT 8746505 8746523 TGATAGTCGCATCAAGGTCATTC 8747002 8746980 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P001748.1 t3656 M9-10E 1 CAPS t3656.G001 CM3.6.1_pseudomol chr09 GTTGATTCCACATCTCGGTAGT 25158556 25158577 ACACGATGCCATAAGATGAACA 25159028 25159007 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P001749.1 t3656 M10-1P 1 CAPS t3656.G001 CM3.6.1_pseudomol chr10 CCACGAACTGCTAAGGCTATTT 4497394 4497415 GTTGCCCCCATTATAAGGTG 4498134 4498115 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P001750.1 t3656 M11-13H 1 CAPS t3656.G001 CM3.6.1_pseudomol chr11 AATAGGGTTGACCTGGTGGG 21043682 21043701 GCATTTAGGCAGTGGGTTTC 21044451 21044432 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P001751.1 t3656 M11-14E 1 CAPS t3656.G001 CM3.6.1_pseudomol chr11 CACAAAAGACAACTCCCCATAA 23460157 23460178 GACTTCAGGTACATGCACAATACTG 23460944 23460920 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol t3656.P001752.1 t3656 M12-11B 1 CAPS t3656.G001 CM3.6.1_pseudomol chr12 CAAGTCTTTCTTCGTGGCTTCT 17385097 17385118 TCAAATGGGGTTCAGCAAAT 17385792 17385773 10.3389/fpls.2018.01577 30429864 1 CM3.6.1_pseudomol