marker_id species_id marker_name sub_number marker_type mapped_genome_id reference_seq_name chr fwd_primer_seq fwd_primer_start_pos fwd_primer_end_pos rev_primer_seq rev_primer_start_pos rev_primer_end_pos target_seq target_chr target_start_pos target_end_pos allele enzyme comments doi pubmed f_active assembly_version t3654.M003577.1 t3654 SNP Phe226_CAPS 1 CAPS t3654.G002 V1.0 Chr4 CCTGCTGTTCCACCAATTCCAACAACT 8886565 8886591 TGGAGAAAGCAAATTGAGCGAGCGATA 8888158 8888132 NA 1179+415 [bulk of F2 and BC1 populations from PI 165002 x PI 593380]; 1594 [bulk of F2 and BC1 populations from PI 165002 x PI 593380]; 1594+1179+415 [bulk of F2 and BC1 populations from PI 165002 x PI 593380]; A [bulk of F2 and BC1 populations from PI 165002 x PI 593380]; C [bulk of F2 and BC1 populations from PI 165002 x PI 593380]; C/G [bulk of F2 and BC1 populations from PI 165002 x PI 593380]; G [bulk of F2 and BC1 populations from PI 165002 x PI 593380]; G/A [bulk of F2 and BC1 populations from PI 165002 x PI 593380]; T [bulk of F2 and BC1 populations from PI 165002 x PI 593380]; T/G [bulk of F2 and BC1 populations from PI 165002 x PI 593380] NA CTAM0128: TGGAGAAAGCAAATTGAGCGAGCGATA CTAM0043: CCTGCTGTTCCACCAATTCCAACAACT 10.1007/s11032-006-9076-4 NA 1 watermelon_v1 t3654.M003595.1 t3654 eIF4E-CAPS-1 1 CAPS t3654.G002 V1.0 Chr3 TTTGGTTCGATAACCCATCC 7767937 7767956 CCAACAGCAAGAACCGAAAG 7768100 7768081 NA 106+35+25 [PI 595203]; C [PI 595203]; 131+35 [‘NHM’ (‘New Hampshire Midget’)]; A [‘NHM’ (‘New Hampshire Midget’)] NA KL07-76: TTT GGT TCG ATA ACC CAT CC KL07-75: CCA ACA GCA AGA ACC GAA AG 10.1007/s00122-009-1169-0 19820912 1 watermelon_v1 t3654.M003597.1 t3654 eIF4E-CAPS-2 1 CAPS t3654.G002 V1.0 Chr3 AAAGCTACATCCACGGAAGA 7767756 7767775 CTCCAAAACTCCTCAACAGTAG 7768033 7768012 NA 211+57 [PI 595203]; C [PI 595203]; 268 [‘NHM’ (‘New Hampshire Midget’)]; A [‘NHM’ (‘New Hampshire Midget’)] NA KL08-03: AAA GCT ACA TCC ACG GAA GA KL08-04: CTC CAA AAC TCC TCA ACA GTA G 10.1007/s00122-009-1169-0 19820912 1 watermelon_v1 t3654.M003669.1 t3654 wsb2-24 1 CAPS t3654.G002 V1.0 Chr2 ATGGTTTACGGCAGAGCAAT 25214495 25214514 GGAGGAATCGAAGAACTCCA 25214844 25214825 NA NA BslI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003670.1 t3654 wsb2-39 1 CAPS t3654.G002 V1.0 Chr2 GTAGCGGCGATGAACAGAGT 27472691 27472710 TTTTGCGACGATTTTCTTCC 27473043 27473024 NA NA BclI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003672.1 t3654 wsb3-24 1 CAPS t3654.G002 V1.0 Chr3 GGAAAGGGATGGGTGAAAGT 26945596 26945615 CCATAATCCGATCCAATGCT 26947149 26947130 NA NA HincII 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003673.1 t3654 wsb2-13 1 CAPS t3654.G002 V1.0 Chr2 CAAATCGAAGGTTGAAAATGC 29842367 29842387 TGCCCTTGTAGACTCCCTTG 29842725 29842706 NA NA TaqI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003674.1 t3654 wsb2-52 1 CAPS t3654.G002 V1.0 Chr2 ACTTGGCAAACCTCGTGAAG 29992305 29992324 TGATGGTCCATGGCTACTGA 29993466 29993447 NA NA HinfI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003675.1 t3654 Cla019831 1 CAPS t3654.G002 V1.0 Chr2 CTTTTGCTTGCATTGTGCAT 26751630 26751649 GGATGCAAAGGAGCTGTTTC 26752279 26752260 NA 527 bp ['Arka Manik']; 334 bp+223 bp ['TS34'] TaqI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003676.1 t3654 Cla019844 1 CAPS t3654.G002 V1.0 Chr2 ATTGAAGACCGTCCTGCCTTTCTCATAAAAAGT 26586773 26586804 GCGCAGCCAAATAATTCAGT 26586965 26586946 NA 160 bp ['Arka Manik']; 192 bp ['TS34'] MseI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003681.1 t3654 wsb1-3 1 CAPS t3654.G002 V1.0 Chr1 TCACCTTCTACCTCTGCGAAC 2722012 2722032 AAATATCCTTCCAAGCAACGTC 2722427 2722406 NA 277 bp+23 bp [Arka Manik]; 110 bp+167 bp+23 bp [TS34] TaqI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003682.1 t3654 wsb1-2 1 CAPS t3654.G002 V1.0 Chr1 CAAGCTTTTCCAATGCCTTC 2724400 2724419 GCCAAATCCAGAAACAGCAT 2724712 2724693 NA 39 bp+71 bp+203 bp [Arka Manik]; 39 bp+71 bp+53 bp+150 bp [TS34] HinfI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003683.1 t3654 wsb1-7 1 CAPS t3654.G002 V1.0 Chr1 ATTCTCTGCACGGCTAGCAT 4208379 4208398 TGTGGCCGCTTACATACTTG 4208712 4208693 NA 334 bp [Arka Manik]; 152 bp+182 bp [TS34] DpnII 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003684.1 t3654 wsb1-8 1 CAPS t3654.G002 V1.0 Chr1 TGGGTCATCTGCTTTCCAAT 7552237 7552256 GTCCCGCAGATTTTCTTCAA 7553637 7553618 NA 331 bp+39 bp [Arka Manik]; 269 bp+42 bp+39 bp [TS34] HaeIII 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003685.1 t3654 wsb1-4 1 CAPS t3654.G002 V1.0 Chr1 GCAAAGAGTATTTGGCTTTGG 7613099 7613119 GCTTGCATATGATTCGGTTG 7613448 7613429 NA 350 bp [Arka Manik]; 225 bp+125 bp [TS34] ApoI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003686.1 t3654 wsb1-13 1 CAPS t3654.G002 V1.0 Chr1 GGATCCTTCACCAAGCATTT 26769066 26769085 CTCGTGTTTCATGACGGTGA 26769421 26769402 NA 46 bp+151 bp+159 bp [Arka Manik]; 46 bp+109 bp+42 bp+159 bp [TS34] TaqI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003687.1 t3654 wsb1-14 1 CAPS t3654.G002 V1.0 Chr1 TTCCCACTCGTTCTCGTTCT 27191575 27191594 TCTGCCAACAATCTGAGTGG 27191926 27191907 NA 250 bp+64 bp+38 bp [Arka Manik]; 314 bp+38 bp [TS34] HpyCH4V 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003688.1 t3654 wsb1-15 1 CAPS t3654.G002 V1.0 Chr1 ATCGCCAGGGTATGTTTGAA 28021371 28021390 CAAGCCTTCCAGTCCACAAT 28021724 28021705 NA 63 bp+76 bp+215 bp [Arka Manik]; 63 bp+76 bp+60 bp+155 bp [TS34] HpyCH4V 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003689.1 t3654 wsb1-16 1 CAPS t3654.G002 V1.0 Chr1 GAATAAGAAATGGAATTGGATAGCA 28020995 28021019 TGGCGATAGAAATGACTAGCAA 28021377 28021356 NA 383 bp [Arka Manik]; 343 bp+40 bp [TS34] TaqI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003690.1 t3654 wsb1-18 1 CAPS t3654.G002 V1.0 Chr1 TTGAGTTCAGCCCCATAACC 29186865 29186884 GGCCTCTGTAAAGAATTTCCAA 29187213 29187192 NA 78 bp+225 bp+17 bp [Arka Manik]; 333 bp+17 bp [TS34] ApoI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003691.1 t3654 wsb1-22 1 CAPS t3654.G002 V1.0 Chr1 CCCCGGGACAAGTGTATAGT 29702733 29702752 AACCACATTTGAGGGTGCAG 29703204 29703185 NA 26 bp+324 bp [Arka Manik]; 26 bp+173 bp+151 bp [TS34] DpnII 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003692.1 t3654 wsb1-23 1 CAPS t3654.G002 V1.0 Chr1 GCCTTTTGCAGATGTTTTGG 29693242 29693261 ATCTTCCCCAGTTGGACCAT 29693602 29693583 NA 137 bp+224 bp [Arka Manik]; 137 bp+35 bp+189 bp [TS34] RsaI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003693.1 t3654 wsb1-26 1 CAPS t3654.G002 V1.0 Chr1 GCCATCTCCAGATTCTCCAA 30067458 30067477 GAGAACTTCAATCGGCCATC 30067848 30067829 NA 270 bp+121 bp [Arka Manik]; 391 bp [TS34] MspI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003694.1 t3654 wsb1-28 1 CAPS t3654.G002 V1.0 Chr1 CCTTCAAGAAAGGCTGGTTG 30239554 30239573 TTATGCCATCCTCGGAGAAC 30239923 30239904 NA 277 bp+93 bp [Arka Manik]; 232 bp+45 bp+93 bp [TS34] RsaI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003695.1 t3654 wsb1-31 1 CAPS t3654.G002 V1.0 Chr1 GGGGTTTGATGTTACGTTCG 30763212 30763231 CTGCAAACCCCTGTTTTTCT 30763561 30763542 NA 350 bp [Arka Manik]; 72 bp+278 bp [TS34] MspI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003696.1 t3654 wsb1-32 1 CAPS t3654.G002 V1.0 Chr1 CCGATTCGGATACTGAGTCC 31084235 31084254 GCACCCTTCTTGGCTGAATA 31084586 31084567 NA 3 bp+12 bp+246 bp+94 bp [Arka Manik]; 3 bp+12 bp+47 bp+199 bp+91 bp [TS34] HinfI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003697.1 t3654 wsb1-33 1 CAPS t3654.G002 V1.0 Chr1 GAATTTGGGATGGAATGGTG 31093600 31093619 TCTTCCACATCCTTCACAC 31093962 31093944 NA 200 bp+163 bp [Arka Manik]; 363 bp [TS34] AluI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003698.1 t3654 wsb1-35 1 CAPS t3654.G002 V1.0 Chr1 ATCGATCGAGGCTCTTGTTG 31133058 31133077 ATGGCTCCAGAGTACGCAAT 31133523 31133504 NA 2 bp+4 bp+369 bp [Arka Manik]; 2 bp+4 bp+185 bp+184 bp [TS34] TaqI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003699.1 t3654 wsb1-36 1 CAPS t3654.G002 V1.0 Chr1 TGTCTTCCAGTTCCAAGCAA 31616400 31616419 CCTTGCGTGTGTGTGTTTTT 31616762 31616743 NA 363 bp [Arka Manik]; 182 bp+181 bp (181 bp+182bp) bp [TS34] DpnII 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003700.1 t3654 wsb1-38 1 CAPS t3654.G002 V1.0 Chr1 CATCGCTACCCAACCCTAAA 31774561 31774580 ACTGGGACAAGGAACACAGG 31774949 31774930 NA 201 bp+188 bp [Arka Manik]; 389 bp [TS34] TaqI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003701.1 t3654 wsb1-39 1 CAPS t3654.G002 V1.0 Chr1 TGCTCTTCTCAGCCCTTCTC 31774876 31774895 CCCGACCAGGATAAGGAAGT 31775348 31775329 NA 88 bp+179 bp+91 bp [Arka Manik]; 88 bp+270 bp [TS34] HinfI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003702.1 t3654 wsb1-42 1 CAPS t3654.G002 V1.0 Chr1 CGCCTAACCAAAACAAAACC 32622216 32622235 TGCCAATCTTGGCTTAGACC 32622613 32622594 NA 73 bp+325 bp [Arka Manik]; 73 bp+48 bp+277 bp [TS34] DpnII 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003703.1 t3654 wsb1-44 1 CAPS t3654.G002 V1.0 Chr1 GCAACCTGTTGCCATTTGTA 33430112 33430131 CAACGATTGGCGAGGTTTAT 33430490 33430471 NA 281 bp+98 bp [Arka Manik]; 187 bp+94 bp+98 bp [TS34] ApoI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003704.1 t3654 wsb1-45 1 CAPS t3654.G002 V1.0 Chr1 TTCTGGCACAATGTCGATGT 33540686 33540705 AGTCGGGATACCCCTACCAG 33541049 33541030 NA 195 bp+169 bp [Arka Manik]; 195 bp+112 bp+57 bp [TS34] MspI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003705.1 t3654 wsb0-8 1 CAPS t3654.G002 V1.0 Chr1 TGTTTTGCCAATTTCGATCA 33441136 33441155 GAAGGGGACTCGAACAATCA 33441445 33441426 NA 76 bp+180 bp+35 bp+19 bp [Arka Manik]; 76 bp+13 bp+167 bp+35 bp+19 bp [TS34] Hpy188I 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003706.1 t3654 wsb2-16 1 CAPS t3654.G002 V1.0 Chr2 TCAACCCAGGGTCAGACTTC 4821119 4821138 GTGGGGTTGTGGTTTTTCTG 4821468 4821449 NA 154 bp+196 bp [Arka Manik]; 350 bp [TS34] HincII 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003707.1 t3654 wsb2-4 1 CAPS t3654.G002 V1.0 Chr2 ATGGCAGAGCTTCCAAAGAA 6337864 6337883 ACGAGCAGAGCAAGAAGGAA 6338255 6338236 NA 392 bp [Arka Manik]; 289 bp+103 bp [TS34] BstUI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003708.1 t3654 wsb2-5 1 CAPS t3654.G002 V1.0 Chr2 AACGCAAAGGTTGCTGATTT 8589584 8589603 TTCATCCACGCACTTCTCTG 8589937 8589918 NA 228 bp+126 bp [Arka Manik]; 354 bp [TS34] HincII 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003709.1 t3654 wsb2-36 1 CAPS t3654.G002 V1.0 Chr2 ATGAAAAATGGGGTTGTGGA 13937375 13937394 TGGAACATGTCAGCTTCTGC 13938453 13938434 NA 368 bp [Arka Manik]; 264 bp+104 bp [TS34] BstNI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003710.1 t3654 wsb2-19 1 CAPS t3654.G002 V1.0 Chr2 TGCACCACCCATTTTTGTAA 19166367 19166386 CTTGCCTTGGCAGTTTCTTC 19166762 19166743 NA 38 bp+76 bp+282 bp [Arka Manik]; 38 bp+358 bp [TS34] AluI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003711.1 t3654 wsb2-37 1 CAPS t3654.G002 V1.0 Chr2 AAGGATCAAACCACGGACAA 20744637 20744656 TCCACTCGGCCTAATACAGG 20745203 20745184 NA 118 bp+137 bp+131 bp [Arka Manik]; 255 bp+131 bp [TS34] TaqI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003712.1 t3654 wsb2-23 1 CAPS t3654.G002 V1.0 Chr2 GTGCATTGGGGTCTCTCCTA 23452365 23452384 GTCGTCGTACCCGAACATTT 23452729 23452710 NA 365 bp [Arka Manik]; 148 bp+217 bp [TS34] TaqI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003713.1 t3654 wsb2-38 1 CAPS t3654.G002 V1.0 Chr2 TACCCGGCTTGTAGATCAGC 24773473 24773492 AGGTTCTAATGGGCGAAGGT 24773870 24773851 NA 398 bp [Arka Manik]; 173 bp+225 bp [TS34] BsaBI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003714.1 t3654 wsb2-24 1 CAPS t3654.G002 V1.0 Chr2 ATGGTTTACGGCAGAGCAAT 25214495 25214514 GGAGGAATCGAAGAACTCCA 25214844 25214825 NA 98 bp+252 bp [Arka Manik]; 98 bp+55 bp+197 bp [TS34] BslI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003715.1 t3654 wsb2-39 1 CAPS t3654.G002 V1.0 Chr2 GTAGCGGCGATGAACAGAGT 27472691 27472710 TTTTGCGACGATTTTCTTCC 27473043 27473024 NA 221 bp+132 bp [Arka Manik]; 353 bp [TS34] BclI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003716.1 t3654 wsb2-13 1 CAPS t3654.G002 V1.0 Chr2 CAAATCGAAGGTTGAAAATGC 29842367 29842387 TGCCCTTGTAGACTCCCTTG 29842725 29842706 NA 5 bp+121 bp+47 bp+186 bp [Arka Manik]; 5 bp+121 bp+233 bp [TS34] TaqI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003717.1 t3654 wsb2-52 1 CAPS t3654.G002 V1.0 Chr2 ACTTGGCAAACCTCGTGAAG 29992305 29992324 TGATGGTCCATGGCTACTGA 29993466 29993447 NA 353 bp+809 bp [Arka Manik]; 1162 bp [TS34] HinfI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003718.1 t3654 dwsb2-62 1 CAPS t3654.G002 V1.0 Chr2 ATCTAGTTCCTATATTTTTTCAATT 30507165 30507189 AAATGTAACAATTTAGTCCCCGTA 30507493 30507470 NA 329 bp [Arka Manik]; 26 bp+303 bp [TS34] MfeI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003719.1 t3654 wsb2-42 1 CAPS t3654.G002 V1.0 Chr2 TCCCATGGTGGAAAAAGAAC 33031012 33031031 AAATTCGAAGCATGGAAACG 33031364 33031345 NA 73 bp+280 bp [Arka Manik]; 73 bp+124 bp+156 bp [TS34] XmnI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003720.1 t3654 wsb2-30 1 CAPS t3654.G002 V1.0 Chr2 CTTTCCCCTGCCTTTCTTTC 33050743 33050762 CCGTACAGGGGGTTTCATAA 33051491 33051472 NA 351 bp [Arka Manik]; 149 bp+202 bp [TS34] TaqI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003721.1 t3654 wsb2-31 1 CAPS t3654.G002 V1.0 Chr2 TCAACTTTCACACGCCACAT 33944508 33944527 CGACTGATCGAGTGGGATCT 33946234 33946215 NA 208 bp+44 bp+107 bp [Arka Manik]; 252 bp+107 bp [TS34] AluI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003722.1 t3654 wsb2-14 1 CAPS t3654.G002 V1.0 Chr2 ATCAGATGTCCCCAGCTACC 34085977 34085996 TCCTTCTTTCTTTCGGCTTTT 34086327 34086307 NA 295 bp+56 bp [Arka Manik]; 87 bp+208 bp+56 bp [TS34] BstNI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003724.1 t3654 wsb0-19 1 CAPS t3654.G002 V1.0 Chr0 TTCAAGCCCTTGATGAGAAGA 19278199 19278219 TTTGAGGGCATGGTTGCTA 19278514 19278496 NA 316 bp [Arka Manik]; 244 bp+72 bp [TS34] HaeIII 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003726.1 t3654 wsb3-29 1 CAPS t3654.G002 V1.0 Chr3 CGTGGGGCAAAAGAATAAAC 2064807 2064826 GCATGACACAGCGGATGA 2065172 2065155 NA 136 bp+85 bp+145 bp [Arka Manik]; 136 bp+230 bp [TS34] RsaI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003727.1 t3654 wsb3-15 1 CAPS t3654.G002 V1.0 Chr3 TCGGAAAAGTTATGGCCAAG 2259709 2259728 CACTCATTCCGTCCTTCGAT 2260086 2260067 NA 378 bp [Arka Manik]; 349 bp+29 bp [TS34] AseI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003728.1 t3654 wsb3-2 1 CAPS t3654.G002 V1.0 Chr3 CTTCCACCCACGTCCATAAT 5492145 5492164 CCAGGCTTGGAAAGAGTCTG 5493811 5493792 NA 93 bp+265 bp [Arka Manik]; 358 bp [TS34] ApaI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003729.1 t3654 wsb3-30 1 CAPS t3654.G002 V1.0 Chr3 AGAAGTTGTTGCCAGCCAAT 6202004 6202023 GACCCAACAGGGTTTGTTGT 6202355 6202336 NA 85 bp+105 bp+162 bp [Arka Manik]; 85 bp+267 bp [TS34] TaqI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003730.1 t3654 wsb3-18 1 CAPS t3654.G002 V1.0 Chr3 CATTCCGACTCTCCTCCATC 10051883 10051902 TGGAATCTGAGGCCGTTAAG 10052242 10052223 NA 360 bp [Arka Manik]; 163 bp+197 bp [TS34] BsaHI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003731.1 t3654 wsb3-34 1 CAPS t3654.G002 V1.0 Chr3 GGCAATGTTAGGATCCGTCAG 10762230 10762250 ATATGAGAATAAAGAAGTGCCAGTCC 10762529 10762504 NA 25 bp+275 bp [Arka Manik]; 300 bp [TS34] BsoBI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003733.1 t3654 wsb3-19 1 CAPS t3654.G002 V1.0 Chr3 TCCGTGGATGAAAGGAACTC 12849943 12849962 AACATTGCAAGTTTTCAGCA 12850295 12850276 NA 353 bp [Arka Manik]; 194 bp+159 bp [TS34] AluI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003734.1 t3654 wsb3-5 1 CAPS t3654.G002 V1.0 Chr3 ACAAGAAAGGGGACCGCTAC 13176481 13176500 AACAGCAGCACCAAACTAAGC 13176832 13176812 NA 85267 bp [Arka Manik]; 352 bp [TS34] TaqI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003735.1 t3654 wsb3-21 1 CAPS t3654.G002 V1.0 Chr3 GATCCAACGCATCCAGATTT 20483143 20483162 ACGGAGTGGAGACAGCGTAT 20484107 20484088 NA 355 bp [Arka Manik]; 168 bp+187 bp [TS34] RsaI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003736.1 t3654 wsb3-22 1 CAPS t3654.G002 V1.0 Chr3 GTGCAAATCATGTGGCTGTT 22584172 22584191 CAAGCCACTGAGCAGTTTCA 22584522 22584503 NA 225 bp+126 bp [Arka Manik]; 351 bp [TS34] BstUI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003738.1 t3654 wsb3-24 1 CAPS t3654.G002 V1.0 Chr3 GGAAAGGGATGGGTGAAAGT 26945596 26945615 CCATAATCCGATCCAATGCT 26947149 26947130 NA 394 bp [Arka Manik]; 229 bp+165 bp [TS34] HincII 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003739.1 t3654 wsb3-35 1 CAPS t3654.G002 V1.0 Chr3 GTTCTCTTTTTCCCTCCCTTTT 27213698 27213719 ATGACAATGAGAACAGTTCATTCC 27213997 27213974 NA 300 bp [Arka Manik]; 70 bp+230 bp [TS34] AluI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003741.1 t3654 wsb0-5 1 CAPS t3654.G002 V1.0 Chr0 ACTAACGGCTCGTGAGGCTCT 17430701 17430721 CATATGTTATATGTATGTCAACCACCA 17431100 17431074 NA 286 bp+115 bp [Arka Manik]; 401 bp [TS34] Hpy188I 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003742.1 t3654 wsb4-19 1 CAPS t3654.G002 V1.0 Chr4 GATGAAATTGGCCTCCAAAG 14988220 14988239 GCATAAGCCTTTTGGTGGTT 14988547 14988528 NA 318 bp+11 bp [Arka Manik]; 145 bp+173 bp+11 bp [TS34] HaeIII 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003743.1 t3654 wsb4-20 1 CAPS t3654.G002 V1.0 Chr4 GAGGCAACAGAAGAGAGACGA 15567047 15567067 ATGGGCTTATGCCATTGAAG 15567348 15567329 NA 117 bp+27 bp+158 bp [Arka Manik]; 117 bp+185 bp [TS34] BstUI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003744.1 t3654 wsb4-21 1 CAPS t3654.G002 V1.0 Chr4 CATCAGTCCACCAATGCAAG 16248158 16248177 ACTGCGGTTGTTTCTGTCCT 16248994 16248975 NA 179 bp+64 bp+57 bp [Arka Manik]; 243 bp+57 bp [TS34] TaqI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003745.1 t3654 wsb4-25 1 CAPS t3654.G002 V1.0 Chr4 GCGCAACCTGATGATTTTCT 16253656 16253675 CAAGATGGCAGCGAACTTCT 16253984 16253965 NA 329 bp [Arka Manik]; 165 bp+164 bp [TS34] Tsp509I 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003747.1 t3654 wsb4-32 1 CAPS t3654.G002 V1.0 Chr4 CCGGAGGAAGAAGCAGAATA 18791329 18791348 GCCAAAACCTCCATCAAAAC 18791634 18791615 NA 193 bp+113 bp [Arka Manik]; 306 bp [TS34] RsaI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003748.1 t3654 wsb4-33 1 CAPS t3654.G002 V1.0 Chr4 AAACGGGGTCGATTTCACTT 18810140 18810159 CCTCTTCCTTCATCGGAACA 18810477 18810458 NA 217 bp+121 bp [Arka Manik]; 338 bp [TS34] EcoRV 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003749.1 t3654 wsb4-34 1 CAPS t3654.G002 V1.0 Chr4 GTTGGGACCATGGAAGAAGA 19039165 19039184 TCAACCAAGGTCTTGAAGGAA 19039475 19039455 NA 289 bp+22 bp [Arka Manik]; 136 bp+153 bp+22 bp [TS34] HinfI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003750.1 t3654 wsb4-7 1 CAPS t3654.G002 V1.0 Chr4 CAACAAGCTGCCTTTCTTCC 19658021 19658040 TGCATTCCGACTTGCTAATG 19658652 19658633 NA 8 bp+44 bp+319 bp [Arka Manik]; 8 bp+44 bp+66 bp+253 bp [TS34] Hpy188I 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003751.1 t3654 wsb4-8 1 CAPS t3654.G002 V1.0 Chr4 TTTGGGGGTCTCAAAGACTG 20422212 20422231 AATGGAACTCAAACCCACCA 20422768 20422749 NA 344 bp [Arka Manik]; 234 bp+110 bp [TS34] HinfI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003752.1 t3654 wsb4-9 1 CAPS t3654.G002 V1.0 Chr4 CAGTCGTGATTTCCCTCGAT 22825391 22825410 TGGGGTGGTTCAAAATCCTA 22825961 22825942 NA 395 bp [Arka Manik]; 137 bp+258 bp [TS34] BstUI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003753.1 t3654 wsb4-10 1 CAPS t3654.G002 V1.0 Chr4 ATCCAGGGGGAATTTTCAAC 23633490 23633509 AAAACATGGAAGCAATTTTCA 23633980 23633960 NA 397 bp [Arka Manik]; 269 bp+128 bp [TS34] RsaI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003754.1 t3654 wsb5-35 1 CAPS t3654.G002 V1.0 Chr5 GCTTTTTCTGTGTGTGGTCGT 8122031 8122051 GATGAATAATGTGTCGACTACTTCAAC 8122330 8122304 NA 172 bp+128 bp [Arka Manik]; 300 bp [TS34] AseI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003755.1 t3654 wsb5-7 1 CAPS t3654.G002 V1.0 Chr5 TGCACAAGCAGAAAGAGCAC 11647446 11647465 CCGGGTGTTTGATGAAAGTT 11647803 11647784 NA 242 bp+116 bp [Arka Manik]; 358 bp [TS34] BslI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003756.1 t3654 wsb5-22 1 CAPS t3654.G002 V1.0 Chr5 TCCCTCGGTTACTTGCAAAC 16713884 16713903 CAATCCTTCCAAACCCATTG 16714914 16714895 NA 219 bp+114 bp+17 bp [Arka Manik]; 333 bp+17 bp [TS34] BslI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003757.1 t3654 wsb5-9 1 CAPS t3654.G002 V1.0 Chr5 CTCGTGTTGATGCTGCTCTC 17660168 17660187 CTTCACCTCAAAGCCCTCAT 17660538 17660519 NA 207 bp+164 bp [Arka Manik]; 187 bp+20 bp+164 bp [TS34] HinfI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003758.1 t3654 wsb5-25 1 CAPS t3654.G002 V1.0 Chr5 TGTACATTGCTTTGGTGCAA 24639624 24639643 GGCTTCAAAGGAAGAGCAGA 24639986 24639967 NA 363 bp [Arka Manik]; 162 bp+201 bp [TS34] BanI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003759.1 t3654 wsb5-11 1 CAPS t3654.G002 V1.0 Chr5 ATACTGGCAGCCTTGCAATC 24641161 24641180 TTGCGGCAGCTGATAATGTA 24641795 24641776 NA 9 bp+147 bp+235 bp [Arka Manik]; 9 bp+147 bp+101 bp+134 bp [TS34] AluI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003760.1 t3654 wsb5-26 1 CAPS t3654.G002 V1.0 Chr5 GGCTTACAGCCCCATGTAGA 26281616 26281635 TTGCCATGGTCAGTATTTTCA 26281976 26281956 NA 361 bp [Arka Manik]; 157 bp+204 bp [TS34] Hpy188I 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003762.1 t3654 wsb5-27 1 CAPS t3654.G002 V1.0 Chr5 GCAAATAGTACGGGGATGGA 29071188 29071207 ACAGCTCGATGCTCCAAAAG 29071565 29071546 NA 378 bp [Arka Manik]; 165 bp+213 bp [TS34] BstUI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003763.1 t3654 wsb5-39 1 CAPS t3654.G002 V1.0 Chr5 AATGCCAACGGAGATGAACT 30620711 30620730 ATTTCTGAAAACCGCAAGGA 30621011 30620992 NA 129 bp+66 bp+106 bp [Arka Manik]; 129 bp+172 bp [TS34] HinfI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003764.1 t3654 wsb5-42 1 CAPS t3654.G002 V1.0 Chr5 AGTTTTGAGCCAGACGGGTA 31759154 31759173 ATTTCAACCAGCCGAGAGAA 31759464 31759445 NA 311 bp [Arka Manik]; 205 bp+106 bp [TS34] HaeIII 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003765.1 t3654 wsb5-30 1 CAPS t3654.G002 V1.0 Chr5 AACCCTTTCCACACCAGAGA 32405594 32405613 TAGTAGCCAAGGCTCGAGGA 32405943 32405924 NA 350 bp [Arka Manik]; 168 bp+182 bp [TS34] MspI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003767.1 t3654 wsb6-15 1 CAPS t3654.G002 V1.0 Chr6 GCAGAGCCCAACAAAGAGC 946994 947012 GCCAGTGATTTTGTTGGTAAATC 947413 947391 NA 259 bp+161 bp [Arka Manik]; 199 bp+60 bp+161 bp [TS34] KpnI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003768.1 t3654 wsb6-1 1 CAPS t3654.G002 V1.0 Chr6 ACGACGTGACAACAAATGGA 1960699 1960718 TCTTGGTTTCCCAGGAACAT 1961080 1961061 NA 225 bp+157 bp [Arka Manik]; 163 bp+62 bp+157 bp [TS34] BstUI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003769.1 t3654 wsb6-45 1 CAPS t3654.G002 V1.0 Chr6 CTGTACTGGGAGGGCAGAAC 3841792 3841811 CGGGATAAACCCAGATGTTG 3842145 3842126 NA 189 bp+165 bp [Arka Manik]; 139 bp+50 bp+165 bp [TS34] Hpy188III 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003770.1 t3654 wsb6-46 1 CAPS t3654.G002 V1.0 Chr6 TCAAGAACCAACATCCGTAACA 5006047 5006068 AAGCAAAAGAGGGGGAGAAG 5006460 5006441 NA 2 bp+412 bp [Arka Manik]; 2 bp+163 bp+249 bp [TS34] Hpy188III 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003771.1 t3654 wsb6-47 1 CAPS t3654.G002 V1.0 Chr6 TATCCTTTGGTAGGGCCTTG 5019364 5019383 CTCCTCTCCCGAAATGACTG 5019855 5019836 NA 304 bp [Arka Manik]; 188 bp+116 bp [TS34] BstUI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003773.1 t3654 wsb6-28 1 CAPS t3654.G002 V1.0 Chr6 GAAACTCCGCCGACTGTACC 6342153 6342172 AGTGGCCGCAATACACTGA 6342452 6342434 NA 5 bp+135 bp+59 bp+101 bp [Arka Manik]; 5 bp+135 bp+160 bp [TS34] HaeIII 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003774.1 t3654 wsb6-39 1 CAPS t3654.G002 V1.0 Chr6 CACCCAGCACTAGCAGATCA 18399324 18399343 CGCTTTAGGGTTTCAAGTGC 18399882 18399863 NA 119 bp+43 bp+144 bp+41 bp [Arka Manik]; 119 bp+187 bp+41 bp [TS34] RsaI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003775.1 t3654 wsb6-41 1 CAPS t3654.G002 V1.0 Chr6 CATGCTTCTTAAAGGGCAATTC 20173735 20173756 TTAGCCAGGGCGAGTATGTT 20174072 20174053 NA 144 bp+194 bp [Arka Manik]; 338 bp [TS34] TaqI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003777.1 t3654 wsb6-43 1 CAPS t3654.G002 V1.0 Chr6 TTCATGATTGGAATGCGTTT 21098749 21098768 CGTGCACAAATTCTTTTGATAC 21099055 21099034 NA 126 bp+181 bp [Arka Manik]; 307 bp [TS34] BsaHI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003778.1 t3654 wsb6-8 1 CAPS t3654.G002 V1.0 Chr6 ACGTCCAACAGGCTGGATAC 21580833 21580852 GCCGATTGAAAGAACTGACC 21581324 21581305 NA 404 bp [Arka Manik]; 202 bp+202 bp [TS34] BstUI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003779.1 t3654 wsb6-9 1 CAPS t3654.G002 V1.0 Chr6 TCACTGCGTTTCTCCTCTGA 23619858 23619877 CGTCCAGTCACTGTCCGTTA 23620502 23620483 NA 176 bp+207 bp [Arka Manik]; 383 bp [TS34] ApoI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003783.1 t3654 wsb6-56 1 CAPS t3654.G002 V1.0 Chr6 ATCCCAACCCCAAAAGTTTC 26245960 26245979 ATTTCCTGAAGCTTGGCAGA 26246305 26246286 NA 420 bp [Arka Manik]; 188 bp+232 bp [TS34] BstUI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003784.1 t3654 wsb6-57 1 CAPS t3654.G002 V1.0 Chr6 AATGGATGAACAGACGCAGA 26248820 26248839 GGGGAGAAATGCATGGTAAG 26249219 26249200 NA 129 bp+271 bp [Arka Manik]; 235 bp+165 bp [TS34] TaqI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003785.1 t3654 wsb6-58 1 CAPS t3654.G002 V1.0 Chr6 CCGATGATACCTTCCCGAAT 26266441 26266460 TCTTACAACCAAGCATCAGGA 26266843 26266823 NA 403 bp [Arka Manik]; 131 bp+272 bp [TS34] RsaI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003786.1 t3654 wsb6-59 1 CAPS t3654.G002 V1.0 Chr6 AACGAACAATCGCAGCTCTT 26264207 26264226 CAATATCAAGCGCAAAACCA 26265270 26265251 NA 66 bp+ 95 bp+ 275 bp [Arka Manik]; 66 bp+370 bp [TS34] RsaI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003787.1 t3654 wsb6-60 1 CAPS t3654.G002 V1.0 Chr6 TCCCAAGGAAATGGAATCTG 26267287 26267306 AGACGCCAGGTTGTAGTTTGA 26267749 26267729 NA 14 bp+ 34 bp+ 53 bp+ 362 bp [Arka Manik]; 14 bp+34 bp+53 bp+34 bp+328 bp [TS34] HinfI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003788.1 t3654 wsb6-50 1 CAPS t3654.G002 V1.0 Chr6 CCAATTACAATTCCGGCAAC 26217465 26217484 TGAGAAATGGGCAAAACCTT 26217795 26217776 NA 331 bp [Arka Manik]; 114 bp+217 bp [TS34] AluI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003789.1 t3654 wsb6-52 1 CAPS t3654.G002 V1.0 Chr6 TTTTTGATGGGACGCAATTC 26181324 26181343 TCTCTTCCAATGGCTTGTGA 26181953 26181934 NA 76 bp+ 324 bp [Arka Manik]; 400 bp [TS34] HindIII 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003790.1 t3654 wsb6-54 1 CAPS t3654.G002 V1.0 Chr6 TCAAGCAAGAACCGATTTCA 26067651 26067670 AACAACCTCTCCGGTGTGATA 26068053 26068033 NA 325 bp+ 14 bp+ 64 bp [Arka Manik]; 151 bp+174 bp+14 bp+64 bp [TS34] AluI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003791.1 t3654 wsb7-1 1 CAPS t3654.G002 V1.0 Chr7 GGAAATTGGAGAACGAGCTTT 689615 689635 GGGATGGTGGAGGGTATACAG 689971 689951 NA 65 bp+65 bp+230 bp [Arka Manik]; 65 bp+295 bp [TS34] BspEI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003792.1 t3654 wsb7-2 1 CAPS t3654.G002 V1.0 Chr7 ACAACAAATTTCCAGAGTAAATCAC 4197319 4197343 AGGCGAAGAGATTGAAGCAA 4198369 4198350 NA 403 bp [Arka Manik]; 196 bp+207 bp [TS34] BstUI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003793.1 t3654 wsb7-3 1 CAPS t3654.G002 V1.0 Chr7 AAGCACACTGGATTCTTGTTCA 6595531 6595552 GGTGGTTACGGGGAAGAGAC 6595880 6595861 NA 24 bp+326 bp [Arka Manik]; 24 bp+111 bp+215 bp [TS34] TaqI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003795.1 t3654 wsb7-5 1 CAPS t3654.G002 V1.0 Chr7 CCCACCATTACATGACTCTGC 16384387 16384407 GGTTTCCAGATGAGCGTGAT 16384769 16384750 NA 216 bp+167 bp [Arka Manik]; 383 bp [TS34] MspI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003796.1 t3654 wsb7-9 1 CAPS t3654.G002 V1.0 Chr7 TTGAGCTTCCCTTGGTGTGT 18042494 18042513 TGGTAAAGAGAAACAGCATTCC 18042845 18042824 NA 352 bp [Arka Manik]; 183 bp+169 bp [TS34] BsaHI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003798.1 t3654 wsb7-7 1 CAPS t3654.G002 V1.0 Chr7 AAGAACAAGTCCCGTTGTGG 21023030 21023049 GAGTTCTTTGCCGGTGATACA 21023381 21023361 NA 193 bp+159 bp [Arka Manik]; 352 bp [TS34] HinfI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003799.1 t3654 wsb7-8 1 CAPS t3654.G002 V1.0 Chr7 GCTGATAGACCTCCCTCATTG 23673975 23673995 TGTGAGTGGTCCACGGTATT 23674640 23674621 NA 84 bp+13 bp+223 bp+88 bp [Arka Manik]; 84 bp+13 bp+121 bp+102 bp+88 bp [TS34] AluI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003800.1 t3654 wsb7-11 1 CAPS t3654.G002 V1.0 Chr7 CACTCCCAAACTTTCCGACTA 23775583 23775603 TTGCCATCTGATCTGGGTTC 23775929 23775910 NA 21 bp+327 bp+12 bp [Arka Manik]; 21 bp+176 bp+151 bp+12 bp [TS34] Hpy188I 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003801.1 t3654 wsb7-19 1 CAPS t3654.G002 V1.0 Chr7 ACAGACCGAAGAACCGAATG 24074487 24074506 TTTGGTCCCATTGAAGGAAG 24074808 24074789 NA 466 bp [Arka Manik]; 266 bp+200 bp [TS34] BsaHI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003802.1 t3654 wsb7-12 1 CAPS t3654.G002 V1.0 Chr7 ACATACGAGGCCTTGCGTTA 24646355 24646374 ATATGCGGCCAAACAACATT 24647261 24647242 NA 78 bp+13 bp+123 bp+206 bp [Arka Manik]; 78 bp+13 bp+329 bp [TS34] MspI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003803.1 t3654 wsb7-13 1 CAPS t3654.G002 V1.0 Chr7 AACGAGTCCCAACTCCTTGA 24992306 24992325 CGCCAGGATTTTATTGATCG 24993157 24993138 NA 122 bp+15 bp+403 bp [Arka Manik]; 122 bp+15 bp+66 bp+337 bp [TS34] TaqI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003804.1 t3654 wsb7-16 1 CAPS t3654.G002 V1.0 Chr7 CGCCTCCTTACTCTCCTCC 29510623 29510641 TCAAATCCTTTCACTTCAATGC 29511582 29511561 NA 200 bp+220 bp [Arka Manik]; 420 bp [TS34] RsaI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003805.1 t3654 wsb7-18 1 CAPS t3654.G002 V1.0 Chr7 TTGCCTTCTACAACAGAGACTCC 31062315 31062337 AACCAGAGGAGCAGATCGAC 31063066 31063047 NA 90 bp+74 bp+256 bp [Arka Manik]; 90 bp+74 bp+75 bp+181 bp [TS34] AluI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003807.1 t3654 wsb0-2 1 CAPS t3654.G002 V1.0 Chr7 TGTTCCCTCTGGACTTGGAG 5513116 5513135 CAACTAGGCCTTTCGTTGGA 5513535 5513516 NA 420 bp [Arka Manik]; 175 bp+245 bp [TS34] ApoI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003808.1 t3654 wsb8-1 1 CAPS t3654.G002 V1.0 Chr8 CCAACAATTCAGCACCCTTC 3333282 3333301 GAAGGTAAAAGCTTGGATGGAA 3333682 3333661 NA 21 bp+392 bp [Arka Manik]; 21 bp+163 bp+229 bp [TS34] HindIII 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003810.1 t3654 wsb8-12 1 CAPS t3654.G002 V1.0 Chr8 CGTAGACGTTCGTGTTACGATT 14908409 14908430 GAAAGAGTGGTATTTCTTCTCTCCA 14908847 14908823 NA 122 bp+238 bp [Arka Manik]; 360 bp [TS34] BsaHI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003811.1 t3654 wsb8-5 1 CAPS t3654.G002 V1.0 Chr8 TCTCTGCCTGTTACCGTTCC 15041194 15041213 CAAGGCCAAGTCCAATTGTT 15041987 15041968 NA 372 bp [Arka Manik]; 251 bp+121 bp [TS34] NheI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003812.1 t3654 wsb8-34 1 CAPS t3654.G002 V1.0 Chr8 AGCGAAATTTCCAATTGTTGA 17050570 17050590 TCCAATCACAAACCCTAGCC 17050919 17050900 NA 151 bp+78 bp+112 bp+9 bp [Arka Manik]; 229 bp+112 bp+9 bp [TS34] ApoI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003813.1 t3654 wsb8-23 1 CAPS t3654.G002 V1.0 Chr8 GGCATCTGAGAACTGGAAGG 17464149 17464168 TTGTTGAAAACCCATCTGAAA 17464799 17464779 NA 660 bp [Arka Manik]; 369 bp+291 bp [TS34] BstUI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003814.1 t3654 wsb8-24 1 CAPS t3654.G002 V1.0 Chr8 TCCTATCACTGCTCAAATTCCA 17596408 17596429 CCCAGAAATACTTTCTCCGACA 17596799 17596778 NA 209 bp+211 bp [Arka Manik]; 420 bp [TS34] BsoBI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003815.1 t3654 wsb8-13 1 CAPS t3654.G002 V1.0 Chr8 GGCAACAGCCATATCAGCTT 17901086 17901105 GGGGTGGCATATCCAGACTA 17901471 17901452 NA 197 bp+223 bp [Arka Manik]; 420 bp [TS34] TaqI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003817.1 t3654 wsb8-15 1 CAPS t3654.G002 V1.0 Chr8 TGGAAGTGATCTCGAATTCTGT 21656590 21656611 TTCATCACCTGAAACGGTCA 21656971 21656952 NA 413 bp [Arka Manik]; 221 bp+192 bp [TS34] RsaI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003818.1 t3654 wsb8-28 1 CAPS t3654.G002 V1.0 Chr8 GGGCTCGGACTTGGATTT 24241387 24241404 CAATCTCTTCCCTGTAGCAAAA 24241696 24241675 NA 127 bp+203 bp [Arka Manik]; 330 bp [TS34] TaqI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003819.1 t3654 wsb8-32 1 CAPS t3654.G002 V1.0 Chr8 CAACACGTCGTGCCATTTCT 25861515 25861534 TGGTTACCATTTTGGGGAAA 25861949 25861930 NA 182 bp+266 bp [Arka Manik]; 448 bp [TS34] AvaII 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003820.1 t3654 wsb8-19 1 CAPS t3654.G002 V1.0 Chr8 CGCTGCTTCATTTTCAGCTC 25913387 25913406 CTGAATGTGCTTGTTGTCAGC 25914848 25914828 NA 12 bp+33 bp+77 bp+110 bp+188 bp [Arka Manik]; 12 bp+33 bp+77 bp+298 bp [TS34] TaqI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003821.1 t3654 wsb0-1 1 CAPS t3654.G002 V1.0 Chr8 TCTCTGGAAGCCGCTTTAAC 20085151 20085170 GAGAAGGCAAATGCAGCTCT 20085573 20085554 NA 414 bp [Arka Manik]; 188 bp+226 bp [TS34] MspI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003822.1 t3654 wsb9-13 1 CAPS t3654.G002 V1.0 Chr9 GACAGGTTTGGTTGGGATTG 1192936 1192955 AAAGATCCAAATAACACATAGAAGAGA 1193334 1193308 NA 233 bp+187 bp [Arka Manik]; 420 bp [TS34] BanI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003823.1 t3654 wsb9-14 1 CAPS t3654.G002 V1.0 Chr9 GCATCTGCAAAGGGTGAAAT 1599978 1599997 TTCGGAATCAGCGATACAAA 1600348 1600329 NA 396 bp [Arka Manik]; 212 bp+184 bp [TS34] Tsp509I 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003824.1 t3654 wsb9-24 1 CAPS t3654.G002 V1.0 Chr9 CCGCAATCAGAGTTACAGAATTT 1906792 1906814 ATCGTGGACGGCAATGATAG 1907210 1907191 NA 66 bp+136 bp+218 bp [Arka Manik]; 66 bp+354 bp [TS34] TaqI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003825.1 t3654 wsb9-1 1 CAPS t3654.G002 V1.0 Chr9 GGGCGATGTTATGTCTGGTT 2305917 2305936 ATTGGAACCACCACAAGGAG 2306231 2306212 NA 89 bp+50 bp+94 bp+82 bp [Arka Manik]; 89 bp+144 bp+82 bp [TS34] AluI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003826.1 t3654 wsb9-26 1 CAPS t3654.G002 V1.0 Chr9 TTTCTCAAGCCAGAGAGGTTT 3509367 3509387 TTTTAATTTTCTTGTCTGATTCTTTGA 3510280 3510254 NA 366 bp+9 bp [Arka Manik]; 218 bp+148 bp+9 bp [TS34] ApoI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003827.1 t3654 wsb9-27 1 CAPS t3654.G002 V1.0 Chr9 GACCAAATTTTCCTCCTACCC 3531830 3531850 AACTTCAGTGGCATCCTCAAA 3532199 3532179 NA 207 bp+192 bp [Arka Manik]; 399 bp [TS34] TaqI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003828.1 t3654 wsb9-28 1 CAPS t3654.G002 V1.0 Chr9 TCAAGAAAAGGATGCTATTCCAA 3635019 3635041 GGATTTCAAGCTGCAGGTCTTT 3635428 3635407 NA 264 bp+156 bp [Arka Manik]; 187 bp+77 bp+156 bp [TS34] DpnII 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003829.1 t3654 wsb9-30 1 CAPS t3654.G002 V1.0 Chr9 TCTCACACTGTTGAATGCAATG 4022906 4022927 ATTCCACCCTCTCGTGGAG 4023316 4023298 NA 99 bp+71 bp+33 bp+162 bp+55 bp [Arka Manik]; 99 bp+71 bp+195 bp+55 bp [TS34] AluI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003830.1 t3654 wsb9-31 1 CAPS t3654.G002 V1.0 Chr9 TGGTTAGAGACTGCAGATCAGG 4659579 4659600 GAGAGGCCAAAGGTGAAGC 4660329 4660311 NA 7 bp+413 bp [Arka Manik]; 7 bp+189 bp+224 bp [TS34] HaeIII 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003831.1 t3654 wsb9-32 1 CAPS t3654.G002 V1.0 Chr9 CCGAGTTGAATCAGAACGAGA 5176198 5176218 ATTCATCATGCACTGGTTCG 5176616 5176597 NA 80 bp+60 bp+49 bp+201 bp+30 bp [Arka Manik]; 80 bp+60 bp+250 bp+30 bp [TS34] AluI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003832.1 t3654 wsb9-35 1 CAPS t3654.G002 V1.0 Chr9 AGTGCCATCGTCGGAGAATA 5601178 5601197 TGGCCCATTTATTCATAGCC 5601593 5601574 NA 188 bp+88 bp+17 bp+93 bp+34 bp [Arka Manik]; 276 bp+17 bp+93 bp+34 bp [TS34] MspI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003834.1 t3654 wsb9-4 1 CAPS t3654.G002 V1.0 Chr9 CAGGGTTTCTGTGCGGTTAT 9507106 9507125 ATGAAAACGGTTCTCGCAAC 9507443 9507424 NA 338 bp [Arka Manik]; 210 bp+128 bp [TS34] RsaI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003836.1 t3654 wsb9-7 1 CAPS t3654.G002 V1.0 Chr9 TTTCTACTTCCCCCTATCCCTTA 13958538 13958560 GAGTCAGAGGACTGAGGAGAGTG 13958864 13958842 NA 219 bp+12 bp+55 bp+74 bp [Arka Manik]; 145 bp+74 bp+12 bp+55 bp+74 bp [TS34] Tsp509I 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003837.1 t3654 wsb9-18 1 CAPS t3654.G002 V1.0 Chr9 ACCCCATGCTGTTTGTATCC 19740269 19740288 ACCGGCGGTAAAGAACAAT 19740698 19740680 NA 197 bp+283 bp [Arka Manik]; 480 bp [TS34] DpnII 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003838.1 t3654 wsb9-40 1 CAPS t3654.G002 V1.0 Chr9 GTGGGGAAATGGGTTGGAG 24132562 24132580 ACCCATAAGAAGACTAATACAAATCAA 24132951 24132925 NA 175 bp+49 bp+188 bp [Arka Manik]; 175 bp+237 bp [TS34] TaqI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003839.1 t3654 wsb9-41 1 CAPS t3654.G002 V1.0 Chr9 TCGTTCACACCGTTGTATCC 23994459 23994478 CGTATAAATCACATTCTTAAACAAAAA 23994812 23994786 NA 58 bp+86 bp+210 bp [Arka Manik]; 58 bp+296 bp [TS34] HpyCH4V 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003840.1 t3654 wsb9-46 1 CAPS t3654.G002 V1.0 Chr9 GGCGAGATCACACTTCAGGT 29819512 29819531 TGACATTGACAAGGTTACAAGGA 29820819 29820797 NA 217 bp+141 bp+9 bp [Arka Manik]; 165 bp+52 bp+141 bp+9 bp [TS34] DpnII 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003841.1 t3654 wsb9-51 1 CAPS t3654.G002 V1.0 Chr9 TCAAGAGAAAGAGGGGGAGA 30844495 30844514 CCCAACCCCATACACATTTC 30844918 30844899 NA 384 bp+40 bp [Arka Manik]; 313 bp+71 bp+40 bp [TS34] HinfI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003843.1 t3654 wsb9-23 1 CAPS t3654.G002 V1.0 Chr9 TGGTGTTGGATAGTTCACAGG 34737404 34737424 ACTGCCTTTCGTCATTGCTT 34738498 34738479 NA 336 bp+144 bp [Arka Manik]; 480 bp [TS34] HincII 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003844.1 t3654 wsb9-12 1 CAPS t3654.G002 V1.0 Chr9 CTGATGTTGCATTGCCTTTG 34852147 34852166 ACTGATCTCCCCATGGACAA 34852487 34852468 NA 192 bp+149 bp [Arka Manik]; 341 bp [TS34] BstNI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003845.1 t3654 wsb10-29 1 CAPS t3654.G002 V1.0 Chr9 TGGTTAGAGACTGCAGATCAGG 4659579 4659600 GAGAGGCCAAAGGTGAAGC 4660329 4660311 NA 7 bp+413 bp [Arka Manik]; 7 bp+189 bp+224 bp [TS34] HaeIII 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003846.1 t3654 wsb11-30 1 CAPS t3654.G002 V1.0 Chr11 TCTCGCGATAAGCTTGATGA 21171075 21171094 GCGTACACCATAGCCCTAGC 21171435 21171416 NA 220 bp+21 bp+11 bp+168 bp [Arka Manik]; 241 bp+11 bp+168 bp [TS34] DpnII 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003848.1 t3654 wsb10-4 1 CAPS t3654.G002 V1.0 Chr10 GGGTGAAATGGATTTTGCTG 4602224 4602243 TCCTTCAAGGGATGACTTCG 4602814 4602795 NA 164 bp+167 bp [Arka Manik]; 331 bp [TS34] MspI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003849.1 t3654 wsb10-6 1 CAPS t3654.G002 V1.0 Chr10 GCTGTGGAACAAGTCGATCA 9897023 9897042 TGGACCAACAATTAACCCAAC 9897326 9897306 NA 167 bp+121 bp+16 bp [Arka Manik]; 288 bp+16 bp [TS34] TaqI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003850.1 t3654 wsb10-7 1 CAPS t3654.G002 V1.0 Chr10 TTGAAAGTTGCACCAGCATT 13617833 13617852 TTCTGTCTCTGGCCACCTCT 13618142 13618123 NA 183 bp+40 bp+8 bp+79 bp [Arka Manik]; 139 bp+44 bp+40 bp+8 bp+79 bp [TS34] DpnII 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003851.1 t3654 wsb10-21 1 CAPS t3654.G002 V1.0 Chr10 GCAAAACCAGAAACTTAGGAGGA 15967107 15967129 ATGGCGTCGACATTGAAAG 15967457 15967439 NA 360 bp [Arka Manik]; 155 bp+205 bp [TS34] BstNI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003852.1 t3654 wsb10-22 1 CAPS t3654.G002 V1.0 Chr10 CCAAAGGACCCTTTCCTGTT 17320000 17320019 CTTGGGGCTCTAGGATGTGT 17320399 17320380 NA 232 bp+188 bp [Arka Manik]; 420 bp [TS34] MspI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003853.1 t3654 wsb10-24 1 CAPS t3654.G002 V1.0 Chr10 CAATGCGAGATTCAAGGATG 17343303 17343322 CTGTTGTCTATGGAAGGGGATT 17344486 17344465 NA 420 bp [Arka Manik]; 228 bp+192 bp [TS34] BstUI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003855.1 t3654 wsb10-14 1 CAPS t3654.G002 V1.0 Chr10 CCACACTTGCAGTAAGATGAGTG 19610859 19610881 GATTTGGATCCACGAATGGT 19611458 19611439 NA 38 bp+158 bp+404 bp [Arka Manik]; 38 bp+562 bp [TS34] MspI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003856.1 t3654 wsb10-16 1 CAPS t3654.G002 V1.0 Chr10 AGAGTGTCCGGGAAACACAG 23364653 23364672 TGATATTTCTGTCGAAATCTTATGG 23365054 23365030 NA 420 bp [Arka Manik]; 214 bp+206 bp [TS34] BtgI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003857.1 t3654 wsb10-27 1 CAPS t3654.G002 V1.0 Chr10 CATCATTCGCCCACTGTTTT 23566065 23566084 TCAGTCAATAAAAACTCATTTCCA 23566464 23566441 NA 420 bp [Arka Manik]; 230 bp+190 bp [TS34] PstI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003858.1 t3654 wsb10-30 1 CAPS t3654.G002 V1.0 Chr10 TCACTCAACAACCCCAACAA 25613530 25613549 AGAGCGAGGAGGAGGCAAC 25613942 25613924 NA 420 bp [Arka Manik]; 182 bp+238 bp [TS34] BstUI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003859.1 t3654 wsb10-32 1 CAPS t3654.G002 V1.0 Chr10 GGTCAAATTCGTGATGATTGG 25656220 25656240 TGTCAATTTCTTTTCGTTTGGA 25656633 25656612 NA 196 bp+15 bp+4 bp+34 bp+171 bp [Arka Manik]; 211 bp+4 bp+34 bp+171 bp [TS34] HaeIII 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003860.1 t3654 wsb10-33 1 CAPS t3654.G002 V1.0 Chr10 CCTTCCGTTGGTTTCTGTCT 25698015 25698034 GCCAGAACAAGGACGAACAT 25698433 25698414 NA 420 bp [Arka Manik]; 210 bp+210 bp [TS34] AluI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003861.1 t3654 wsb10-35 1 CAPS t3654.G002 V1.0 Chr10 TTATAGCACGTTGCCTGCTG 25765590 25765609 TTCCCACACCCAATACTGCT 25767169 25767150 NA 52 bp+135 bp+87 bp+36 bp+110 bp [Arka Manik]; 52 bp+222 bp+36 bp+110 bp [TS34] HpyCH4V 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003862.1 t3654 wsb10-36 1 CAPS t3654.G002 V1.0 Chr10 GCCTCACCGTCTCTCACTCT 25901648 25901667 GAATGAAGATCTCTTTATACTTTCAGG 25902158 25902132 NA 141 bp+328 bp+71 bp [Arka Manik]; 469 bp+71 bp [TS34] HinfI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003863.1 t3654 wsb10-37 1 CAPS t3654.G002 V1.0 Chr10 TGGGACGACTGGGATTAGTA 26241895 26241914 GATGATCCTGGCCTGAGGTA 26242309 26242290 NA 224 bp+196 bp [Arka Manik]; 420 bp [TS34] TaqI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003865.1 t3654 wsb10-38 1 CAPS t3654.G002 V1.0 Chr10 GGGATTGATGGACACACTCA 26657759 26657778 GGCTTTAAGGGCTTTAACTTATTT 26658499 26658476 NA 208 bp+93 bp+119 bp [Arka Manik]; 301 bp+119 bp [TS34] ApoI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003866.1 t3654 wsb0-6 1 CAPS t3654.G002 V1.0 Chr0 TTGCCGATACTTTGGCTACC 23428479 23428498 AGTCAGGACTGCATCGACAA 23428818 23428799 NA 14 bp+326 bp [Arka Manik]; 14 bp+205 bp+121 bp [TS34] TaqI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003867.1 t3654 wsb0-25 1 CAPS t3654.G002 V1.0 Chr0 TGAAACACAAATTGTTCAAGAAGG 23578737 23578760 GCCAAAGTTTGCAGCTAAATC 23579053 23579033 NA 120 bp+197 bp [Arka Manik]; 120 bp+27 bp+170 bp [TS34] DpnII 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003870.1 t3654 wsb11-32 1 CAPS t3654.G002 V1.0 Chr11 GGCATTCTTCTGCTGGTACG 21337483 21337502 GAAGTTTTATGTACAAGAAGTCGACAA 21338247 21338221 NA 218 bp+202 bp [Arka Manik]; 420 bp [TS34] BanI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003871.1 t3654 wsb11-36 1 CAPS t3654.G002 V1.0 Chr11 CAATTTGCATGCTCACATCC 21895325 21895344 CCCATGGATTTCAACCCTTT 21895685 21895666 NA 110 bp+251 bp [Arka Manik]; 110 bp+75 bp+176 bp [TS34] BstUI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003872.1 t3654 wsb11-16 1 CAPS t3654.G002 V1.0 Chr11 CCAGCTTTCTCACTCTCTTTCC 22708883 22708904 ACCAGAAATGGCATGGGTAA 22709238 22709219 NA 181 bp+15 bp+176 bp [Arka Manik]; 184 bp+12 bp+176 bp [TS34] BstUI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003873.1 t3654 wsb11-17 1 CAPS t3654.G002 V1.0 Chr11 TGGGAGGTATTGTGGACTCA 23821089 23821108 AAAAACCCACACTTTCCTACAAA 23821492 23821470 NA 183 bp+237 bp [Arka Manik]; 420 bp [TS34] AluI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003875.1 t3654 wsb11-9 1 CAPS t3654.G002 V1.0 Chr11 ATGTGGGCCGTCTCATGTA 26919994 26920012 TGAACATTCTCAAGTTTCTTTTCAA 26920437 26920413 NA 463 bp [Arka Manik]; 304 bp+159 bp [TS34] RsaI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.M003876.1 t3654 wsb9-60 1 CAPS t3654.G002 V1.0 Chr9 CCTCCAAAGGGTTAGGACATC 33087371 33087391 AATTTTGAGAGCACGCAACC 33087806 33087787 NA 212 bp+224 bp [Arka Manik]; 436 bp [TS34] HinfI 10.1371/journal.pone.0145665 26700647 1 watermelon_v1 t3654.P0000001 t3654 W01144 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr04 ACCAAGCTACCCCAACCCACC 24187844 24187864 TCCAAGATTGGGAGGCGGTGC 24188775 24188755 NA NA 0 0 NA BamHI 10.1371/journal.pone.0180741 28704497 1 WCG_chromosome_v2 t3654.P0000002 t3654 W01211 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr04 AGGCCTGAGAATGCTCTGGGGA 23243816 23243837 TTCCTCGGGACCGACACGGAG 23244781 23244761 NA NA 0 0 NA XhoI 10.1371/journal.pone.0180741 28704497 1 WCG_chromosome_v2 t3654.P0000003 t3654 W03041 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr04 TAGACTGGGCGGAAGAGACGGC 24228410 24228431 ACTAATCCATCCCCGAGCACACCT 24229049 24229026 NA NA 0 0 NA TaqI 10.1371/journal.pone.0180741 28704497 1 WCG_chromosome_v2 t3654.P0000004 t3654 W03042 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr04 ACCATACAGCGCTGAAACTCTGCT 24265095 24265118 GCTTGCCTCCAGCTTCGCATGA 24265758 24265737 NA NA 0 0 NA BstNI 10.1371/journal.pone.0180741 28704497 1 WCG_chromosome_v2 t3654.P0000005 t3654 W06252 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr04 GCCAAACTAATCATACATACAG 24290435 24290456 GACATCAATAACATCCCAAGA 24291354 24291334 NA NA 0 0 NA EcoRV 10.1371/journal.pone.0180741 28704497 1 WCG_chromosome_v2 t3654.P0000006 t3654 W08314 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr04 TTATTCTCAATAAACGCCCTTCCCTAGTA 24474797 24474825 CAGCGACATTTTGCAATATTTGAAGATAT 24474936 24474908 NA NA 0 0 NA EcoRV 10.1371/journal.pone.0180741 28704497 1 WCG_chromosome_v2 t3654.P0000007 t3654 W07061 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr04 TGGTTGAGGCCGAAGAGGTTGGT 24605814 24605836 TTATGGGCATGCAGTGTGGGGC 24606657 24606636 NA NA 0 0 NA RsaI 10.1371/journal.pone.0180741 28704497 1 WCG_chromosome_v2 t3654.P0000008 t3654 W07062 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr04 GATTTGGCGTTACATCTGCTT 24629523 24629543 GTTACATTTGAGACATTTGGGT 24630311 24630290 NA NA 0 0 NA TaqI 10.1371/journal.pone.0180741 28704497 1 WCG_chromosome_v2 t3654.P000001.1 t3654 W01144 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr04 ACCAAGCTACCCCAACCCACC 24187844 24187864 TCCAAGATTGGGAGGCGGTGC 24188775 24188755 BamHI 10.1371/journal.pone.0180741 28704497 1 WCG_chromosome_v2 t3654.P0000010 t3654 W06253 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr04 AAAGGCTTGGATTATGGAATT 24880399 24880419 AAAAGTTGTGGGTTAGGGAAT 24881151 24881131 NA NA 0 0 NA PstI 10.1371/journal.pone.0180741 28704497 1 WCG_chromosome_v2 t3654.P0000011 t3654 W0130 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr04 GCCCTGGCCGGACACAGGATA 25665796 25665816 CGACGTCGTCAAAGCCAGCATC 25666330 25666309 NA NA 0 0 NA XagI 10.1371/journal.pone.0180741 28704497 1 WCG_chromosome_v2 t3654.P0000012 t3654 W01214 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr04 TGGGCTCAAGACATAGAACATGCCA 26930194 26930218 AGCTCATCCCACCGATTCATGTGT 26930731 26930708 NA NA 0 0 NA HindIII 10.1371/journal.pone.0180741 28704497 1 WCG_chromosome_v2 t3654.P000002.1 t3654 W01211 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr04 AGGCCTGAGAATGCTCTGGGGA 23243816 23243837 TTCCTCGGGACCGACACGGAG 23244781 23244761 XhoI 10.1371/journal.pone.0180741 28704497 1 WCG_chromosome_v2 t3654.P000003.1 t3654 W03041 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr04 TAGACTGGGCGGAAGAGACGGC 24228410 24228431 ACTAATCCATCCCCGAGCACACCT 24229049 24229026 TaqI 10.1371/journal.pone.0180741 28704497 1 WCG_chromosome_v2 t3654.P000004.1 t3654 W03042 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr04 ACCATACAGCGCTGAAACTCTGCT 24265095 24265118 GCTTGCCTCCAGCTTCGCATGA 24265758 24265737 BstNI 10.1371/journal.pone.0180741 28704497 1 WCG_chromosome_v2 t3654.P000005.1 t3654 W06252 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr04 GCCAAACTAATCATACATACAG 24290435 24290456 GACATCAATAACATCCCAAGA 24291354 24291334 EcoRV 10.1371/journal.pone.0180741 28704497 1 WCG_chromosome_v2 t3654.P000006.1 t3654 W08314 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr04 TTATTCTCAATAAACGCCCTTCCCTAGTA 24474797 24474825 CAGCGACATTTTGCAATATTTGAAGATAT 24474936 24474908 EcoRV 10.1371/journal.pone.0180741 28704497 1 WCG_chromosome_v2 t3654.P000007.1 t3654 W07061 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr04 TGGTTGAGGCCGAAGAGGTTGGT 24605814 24605836 TTATGGGCATGCAGTGTGGGGC 24606657 24606636 RsaI 10.1371/journal.pone.0180741 28704497 1 WCG_chromosome_v2 t3654.P000008.1 t3654 W07062 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr04 GATTTGGCGTTACATCTGCTT 24629523 24629543 GTTACATTTGAGACATTTGGGT 24630311 24630290 TaqI 10.1371/journal.pone.0180741 28704497 1 WCG_chromosome_v2 t3654.P000010.1 t3654 W06253 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr04 AAAGGCTTGGATTATGGAATT 24880399 24880419 AAAAGTTGTGGGTTAGGGAAT 24881151 24881131 PstI 10.1371/journal.pone.0180741 28704497 1 WCG_chromosome_v2 t3654.P000011.1 t3654 W0130 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr04 GCCCTGGCCGGACACAGGATA 25665796 25665816 CGACGTCGTCAAAGCCAGCATC 25666330 25666309 XagI 10.1371/journal.pone.0180741 28704497 1 WCG_chromosome_v2 t3654.P000012.1 t3654 W01214 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr04 TGGGCTCAAGACATAGAACATGCCA 26930194 26930218 AGCTCATCCCACCGATTCATGTGT 26930731 26930708 HindIII 10.1371/journal.pone.0180741 28704497 1 WCG_chromosome_v2 t3654.P0038735 t3654 W12808501 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr06 GTTTGAAGTGAAAGCAACTCAA 13443155 13443176 GGGGGCAATTGATTTCCATGG 13443654 13443634 NA NA 0 0 T/C EcoRI 10.1038/s41438-021-00687-9 34848689 1 WCG_chromosome_v2 t3654.P0038736 t3654 W14775039 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr00 CCAACTGCGAAACCATGCAA 1020318 1020337 GCCCTCAATTCGGTTTTCCC 1021093 1021074 NA NA 0 0 C/T EcoRV Blast_hit_num.:3 10.1038/s41438-021-00687-9 34848689 1 WCG_chromosome_v2 t3654.P0038737 t3654 W15936420 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr06 TGTGAAAAGTTTGGGGTCCT 16633128 16633147 GGTAGCTGACGGTCTTTGCT 16633895 16633876 NA NA 0 0 C/A EcoRI 10.1038/s41438-021-00687-9 34848689 1 WCG_chromosome_v2 t3654.P0038738 t3654 W18030714 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr06 TCCCAACTGCTCTACTCCGA 19014389 19014408 TTGTGACGTGCGATCCTTCA 19015065 19015046 NA NA 0 0 G/A MspI 10.1038/s41438-021-00687-9 34848689 1 WCG_chromosome_v2 t3654.P0038739 t3654 W20801705 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr00 TTCGAAAGGCAGAGCAGAGG 6552205 6552224 ACTGGTGCAGACAAGGATGG 6552826 6552807 NA NA 0 0 A/G EcoRV Blast_hit_num.:2 10.1038/s41438-021-00687-9 34848689 1 WCG_chromosome_v2 t3654.P0038740 t3654 W22227794 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr06 AGACCAAGGGCTCATTTGGT 23698463 23698482 TGTCGGCCCTTTCCATTCAA 23699101 23699082 NA NA 0 0 C/G RsaI 10.1038/s41438-021-00687-9 34848689 1 WCG_chromosome_v2 t3654.P0038757 t3654 WMA 2 1 CAPS t3654.G001 WCG_chromosome_v2 NA AAAACACCCCCGAAAATAAAACTT 0 0 AGGAAGGTGAGAGAGACCTTGCTA 0 0 NA NA 0 0 NA Tru9I - - 1 WCG_chromosome_v2 t3654.P0038758 t3654 WMA 3 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr07 TAGAGGAACTGCCCAACGAAGTAG 6217338 6217361 TTCACATAGTGAGGGGAGAGTGTA 6217978 6217955 NA NA 0 0 NA HaeIII - - 1 WCG_chromosome_v2 t3654.P0038759 t3654 WMA 4 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr08 AATTCCTTACATATCGGGCATTAT 17526025 17526048 TCTAGAGGAACTTCATCACCTTCA 17526359 17526336 NA NA 0 0 NA Tru9I - - 1 WCG_chromosome_v2 t3654.P0038760 t3654 WMA 5 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr04 ACGAGCAAGTATATCTACATCGTG 7494281 7494304 TCTAGAGGCTAAGAAGGAGCTGAG 7495001 7494978 NA NA 0 0 NA Tru9I - - 1 WCG_chromosome_v2 t3654.P0038761 t3654 WMA 6 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr07 AAGCGACAACAATACATTCAACC 6217176 6217198 ATTCACATAGTGAGGGGAGAGTG 6217979 6217957 NA NA 0 0 NA Tru9I - - 1 WCG_chromosome_v2 t3654.P0038762 t3654 WMA 7 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr01 ACTCACCACACCAATGAACCTC 29556069 29556090 GGGCAATTTTTGGCTTTATTATC 29556769 29556748 NA NA 0 0 NA EcoRI - - 1 WCG_chromosome_v2 t3654.P0038764 t3654 WM 11 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr05 TCTCATGCAACCTAATTGATTAC 22715618 22715640 CCTTTCAAAACTTATTCCTTAGGT 22715855 22715832 NA NA 0 0 NA Tru9I - - 1 WCG_chromosome_v2 t3654.P0038765 t3654 WM 13 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr06 AATTCGTCTGTTGTTGTTGGAG 6700449 6700470 CTAGAAACAGGGGTAGAGGT 6701328 6701309 NA NA 0 0 NA NdeI - - 1 WCG_chromosome_v2 t3654.P0038767 t3654 WM 16 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr05 TTGGTTCAATATCTACCCGGT 6621799 6621819 GAATTCTACATGTATGAGAAAG 6622084 6622063 NA NA 0 0 NA EcoRI - - 1 WCG_chromosome_v2 t3654.P0038768 t3654 WM 26 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr09 CAAGTGTTGTGTGAACCGAG 28387391 28387410 CTAGAATTGCAACCATTTTCC 28387958 28387938 NA NA 0 0 NA HinfI - - 1 WCG_chromosome_v2 t3654.P0038770 t3654 WM 33 1 CAPS t3654.G001 WCG_chromosome_v2 NA CTAGAATGGCAAGTCTCAGAC 0 0 ATTCTTCCGAGAATCAACAACC 0 0 NA NA 0 0 NA TaqI - - 1 WCG_chromosome_v2 t3654.P0038771 t3654 WM 38 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr07 GAACACAAGTACGGAACACC 4047768 4047787 GAATTCGATGATCGAGTACCTG 4048201 4048180 NA NA 0 0 NA EcoRI - - 1 WCG_chromosome_v2 t3654.P0038772 t3654 WM 46 1 CAPS t3654.G001 WCG_chromosome_v2 NA CTAGAAGACGCGGGAATG 0 0 ATTCTACCCCAAACCAACATA 0 0 NA NA 0 0 NA HaeIII - - 1 WCG_chromosome_v2 t3654.P0038777 t3654 WM 81 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr07 TCAACAGCATTTTGTGACATT 5253753 5253773 CTAGATTTCTATTACATTTTACACTT 5254149 5254124 NA NA 0 0 NA HaeIII - - 1 WCG_chromosome_v2 t3654.P033119.1 t3654 W12808501 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr06 GTTTGAAGTGAAAGCAACTCAA 13443155 13443176 GGGGGCAATTGATTTCCATGG 13443654 13443634 T/C EcoRI 10.1038/s41438-021-00687-9 34848689 1 WCG_chromosome_v2 t3654.P033120.1 t3654 W14775039 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr00 CCAACTGCGAAACCATGCAA 1020318 1020337 GCCCTCAATTCGGTTTTCCC 1021093 1021074 C/T EcoRV Blast_hit_num.:3 10.1038/s41438-021-00687-9 34848689 1 WCG_chromosome_v2 t3654.P033121.1 t3654 W15936420 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr06 TGTGAAAAGTTTGGGGTCCT 16633128 16633147 GGTAGCTGACGGTCTTTGCT 16633895 16633876 C/A EcoRI 10.1038/s41438-021-00687-9 34848689 1 WCG_chromosome_v2 t3654.P033122.1 t3654 W18030714 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr06 TCCCAACTGCTCTACTCCGA 19014389 19014408 TTGTGACGTGCGATCCTTCA 19015065 19015046 G/A MspI 10.1038/s41438-021-00687-9 34848689 1 WCG_chromosome_v2 t3654.P033123.1 t3654 W20801705 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr00 TTCGAAAGGCAGAGCAGAGG 6552205 6552224 ACTGGTGCAGACAAGGATGG 6552826 6552807 A/G EcoRV Blast_hit_num.:2 10.1038/s41438-021-00687-9 34848689 1 WCG_chromosome_v2 t3654.P033124.1 t3654 W22227794 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr06 AGACCAAGGGCTCATTTGGT 23698463 23698482 TGTCGGCCCTTTCCATTCAA 23699101 23699082 C/G RsaI 10.1038/s41438-021-00687-9 34848689 1 WCG_chromosome_v2 t3654.P033139.1 t3654 WMA 3 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr07 TAGAGGAACTGCCCAACGAAGTAG 6217338 6217361 TTCACATAGTGAGGGGAGAGTGTA 6217978 6217955 Hae III - - 1 WCG_chromosome_v2 t3654.P033140.1 t3654 WMA 4 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr08 AATTCCTTACATATCGGGCATTAT 17526025 17526048 TCTAGAGGAACTTCATCACCTTCA 17526359 17526336 Tru9 I - - 1 WCG_chromosome_v2 t3654.P033141.1 t3654 WMA 5 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr04 ACGAGCAAGTATATCTACATCGTG 7494281 7494304 TCTAGAGGCTAAGAAGGAGCTGAG 7495001 7494978 Tru9 I - - 1 WCG_chromosome_v2 t3654.P033142.1 t3654 WMA 6 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr07 AAGCGACAACAATACATTCAACC 6217176 6217198 ATTCACATAGTGAGGGGAGAGTG 6217979 6217957 Tru9 I - - 1 WCG_chromosome_v2 t3654.P033143.1 t3654 WMA 7 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr01 ACTCACCACACCAATGAACCTC 29556069 29556090 GGGCAATTTTTGGCTTTATTATC 29556769 29556748 EcoR I - - 1 WCG_chromosome_v2 t3654.P033145.1 t3654 WM 11 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr05 TCTCATGCAACCTAATTGATTAC 22715618 22715640 CCTTTCAAAACTTATTCCTTAGGT 22715855 22715832 Tru9 I - - 1 WCG_chromosome_v2 t3654.P033146.1 t3654 WM 13 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr06 AATTCGTCTGTTGTTGTTGGAG 6700449 6700470 CTAGAAACAGGGGTAGAGGT 6701328 6701309 Nde I - - 1 WCG_chromosome_v2 t3654.P033148.1 t3654 WM 16 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr05 TTGGTTCAATATCTACCCGGT 6621799 6621819 GAATTCTACATGTATGAGAAAG 6622084 6622063 EcoR I - - 1 WCG_chromosome_v2 t3654.P033149.1 t3654 WM 26 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr09 CAAGTGTTGTGTGAACCGAG 28387391 28387410 CTAGAATTGCAACCATTTTCC 28387958 28387938 Hinf I - - 1 WCG_chromosome_v2 t3654.P033151.1 t3654 WM 38 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr07 GAACACAAGTACGGAACACC 4047768 4047787 GAATTCGATGATCGAGTACCTG 4048201 4048180 EcoR I - - 1 WCG_chromosome_v2 t3654.P033154.1 t3654 WM 81 1 CAPS t3654.G001 WCG_chromosome_v2 CG_Chr07 TCAACAGCATTTTGTGACATT 5253753 5253773 CTAGATTTCTATTACATTTTACACTT 5254149 5254124 Hae III - - 1 WCG_chromosome_v2