marker_id species_id marker_name sub_number marker_type mapped_genome_id reference_seq_name chr fwd_primer_seq fwd_primer_start_pos fwd_primer_end_pos rev_primer_seq rev_primer_start_pos rev_primer_end_pos target_seq target_chr target_start_pos target_end_pos allele enzyme comments doi pubmed f_active assembly_version t2711.M000001.1 t2711 CCSM-SNP 3 1 Others t2711.G001 Hazu_V2.0 chr7 aggtgaattgggctgtat 677625 677640 ttaggcacgttatcttgaaat 678218 678198 NA NA NA 10.1023/B:EUPH.0000047086.47988.82 NA 1 C.sinensis_v2.0_HZAU_csi t2711.M000002.1 t2711 CCSM-SNP 13 1 Others t2711.G001 Hazu_V2.0 chr6 gaagccctctcatagtccat 21025569 21025586 gccattgcatcttacacg 21026018 21026001 NA NA NA 10.1023/B:EUPH.0000047086.47988.82 NA 1 C.sinensis_v2.0_HZAU_csi t2711.M000005.1 t2711 IDCHI 1 Others t2711.G001 Hazu_V2.0 chr7 TTTCCTCTTGCTTTACGTGT 28759291 28759310 GTCACAGGTAACGGATTTTC 28759485 28759466 NA NA NA 10.1007/s00438-011-0658-4 22160318 1 C.sinensis_v2.0_HZAU_csi t2711.M000011.1 t2711 Csnp13922 1 Others t2711.G001 Hazu_V2.0 chr2 TGTTGAGCGAGCTTAAACGA 20568808 20568827 CTGACCCCAGCAGTTCAAGT 20569107 20569088 NA CGCCCGCTCTCC[G/A]GTTTCGTCGGA [27 citrus cultivars or biotypes] NA " Forward primer: TGTTGAGCGAGCTTAAACGA, SBE primer: CTTCGCCCGCTCTCC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000012.1 t2711 14498_sinensis_515 1 Others t2711.G001 Hazu_V2.0 chrUn CATGGCTGAGCTCCTAAAGC 29862525 29862544 AGGCTTGTGAAATGGCAGAG 29862709 29862690 CTTTGATTTTACCCATTACTGGTTGCCGGGTCTTGTTGGTTCTCAACTTGGCATCAAAAC[C/A]GTTAACTTCTCTGTTTTCTCTGCCATTTCACAAGCCTATCTCGTGGTCCCCGCCAGGAAA C/A [C. clementina (17 cultivars)]; C/A [C. sinensis (33 cultivars)] NA 10.1007/s11032-012-9828-2 NA 1 C.sinensis_v2.0_HZAU_csi t2711.M000013.1 t2711 14307_sinensis_96 1 Others t2711.G001 Hazu_V2.0 chr3 CTCGGAAGGCCAGTAAGGTT 15080854 15080873 CAAAGCCAGCCATTCTCCT 15081685 15081667 TTCTCCTCCTCCTTTATCTTCTCCTCTTNCATTAAACTCTCAAAGTTCAGGTGTTTTTCA[G/C]AATGGGAAGTwCTGAAGGAACCTATGGTGCATACACCTATGAGGAGCTTGAGAGGGAACC C/C [C. sinensis (11 cultivars) and C. clementina (6 cultivars)]; G/G [C. sinensis (19 cultivars) and C. clementina (9 cultivars)]; C/G [C. sinensis (5 cultivars) and C. clementina (1 cultivar)] NA 10.1007/s11032-012-9828-2 NA 1 C.sinensis_v2.0_HZAU_csi t2711.M000014.1 t2711 17194_sinensis_595 1 Others t2711.G001 Hazu_V2.0 chr6 ATGTTTTGGGTGGTGCTCTC 20659077 20659096 GCAATGTGATGCTCAGGATG 20659902 20659883 AGTTGAATTTTGTTGCTGTACACGAAGATGCAATGTCTTCATGCCTCGAATGATCAAATA[T/C]GCGGCATTCGGGTTGAGAGCACCACCCAAAACATGATGCAAATTACGAATTTGTGTAACT C/T [C. sinensis (11 cultivars), C. clementina (9 cultivars)]; T/T [C. sinensis (12 cultivars), C. clementina (2 cultivars)]; C/C [C. sinensis (2 cultivars), C. clementina (2 cultivars)] NA 10.1007/s11032-012-9828-2 NA 1 C.sinensis_v2.0_HZAU_csi t2711.M000021.1 t2711 CCSM-SNP 31 1 Others t2711.G001 Hazu_V2.0 chr4 ctttctccgcccgcctgta 678522 678538 tgtagctctgtgccgttcaaaaa 679049 679027 NA NA NA 10.1023/B:EUPH.0000047086.47988.82 NA 1 C.sinensis_v2.0_HZAU_csi t2711.M000022.1 t2711 CCSM-SNP 53 1 Others t2711.G001 Hazu_V2.0 chr4 tctgcggttaatgaatgtatcg 4558171 4558192 atgcgctgactcggaatc 4559342 4559325 NA NA NA 10.1023/B:EUPH.0000047086.47988.82 NA 1 C.sinensis_v2.0_HZAU_csi t2711.M000026.1 t2711 CCSM-SNP 35 1 Others t2711.G001 Hazu_V2.0 chr5 actactgattctggcaaacctgat 33211208 33211231 gctcgggctgactcttcc 33212447 33212430 NA NA NA 10.1023/B:EUPH.0000047086.47988.82 NA 1 C.sinensis_v2.0_HZAU_csi t2711.M000027.1 t2711 CCSM-SNP 36 1 Others t2711.G001 Hazu_V2.0 chr7 gccgccaccacccatcc 5586090 5586104 tagacgccggcaaacattatccat 5586753 5586731 NA NA NA 10.1023/B:EUPH.0000047086.47988.82 NA 1 C.sinensis_v2.0_HZAU_csi t2711.M000035.1 t2711 IDEMA 1 Others t2711.G001 Hazu_V2.0 chr4 CTCTTTCTGCTTCCTGACATC 14294918 14294938 GCCGGTGAATAAAACACAAC 14295182 14295163 NA NA NA 10.1007/s00438-011-0658-4 22160318 1 C.sinensis_v2.0_HZAU_csi t2711.M000036.1 t2711 IDTRPA 1 Others t2711.G001 Hazu_V2.0 chr2 TTATGCATCCACATGCTCAC 785548 785567 CCCTCGTTCTTGGTAGCTTT 785851 785832 NA NA NA 10.1007/s00438-011-0658-4 22160318 1 C.sinensis_v2.0_HZAU_csi t2711.M000037.1 t2711 IDLCY2 1 Others t2711.G001 Hazu_V2.0 chr8 CGCAAATAATTGATTCAACA 17814739 17814758 GATGATCACGTCATATCGAA 17814959 17814940 NA NA NA 10.1007/s00438-011-0658-4 22160318 1 C.sinensis_v2.0_HZAU_csi t2711.M000038.1 t2711 IDHYB1 1 Others t2711.G001 Hazu_V2.0 chr9 AAAAACAAAGCACCCAGAT 18247238 18247256 GCCACCAGAACCTGTAATAA 18247438 18247419 NA NA NA 10.1007/s00438-011-0658-4 22160318 1 C.sinensis_v2.0_HZAU_csi t2711.M000039.1 t2711 IDHYB2 1 Others t2711.G001 Hazu_V2.0 chr9 TTTGGCACATTTGCTCTCTCT 18247578 18247598 AAAGAAGCATGCCACAGAGC 18247881 18247862 NA NA NA 10.1007/s00438-011-0658-4 22160318 1 C.sinensis_v2.0_HZAU_csi t2711.M000040.1 t2711 IDPSY 1 Others t2711.G001 Hazu_V2.0 chr6 CTCATCACATCTTCGGTCTC 16884294 16884313 CCTGTCGACATTCAGGTTAG 16884540 16884521 NA NA NA 10.1007/s00438-011-0658-4 22160318 1 C.sinensis_v2.0_HZAU_csi t2711.M000041.1 t2711 IDPEPC1 1 Others t2711.G001 Hazu_V2.0 chr2 TTTTGAACAATCGGCTAATGG 12327845 12327865 TTGCTGGAAGAGAGACTCCAA 12328100 12328080 NA NA NA 10.1007/s00438-011-0658-4 22160318 1 C.sinensis_v2.0_HZAU_csi t2711.M000042.1 t2711 IDPEPC2 1 Others t2711.G001 Hazu_V2.0 chr2 TTGGAGTCTCTCTTCCAGCAA 12328080 12328100 GTGAGAGCCACAATGCAAAA 12328230 12328211 NA NA NA 10.1007/s00438-011-0658-4 22160318 1 C.sinensis_v2.0_HZAU_csi t2711.M000043.1 t2711 IDCAX 1 Others t2711.G001 Hazu_V2.0 chr7 GCAATTGGGAGATAGTCAAT 4378128 4378147 TAAGCTGCATTTAACCCTTT 4378365 4378346 NA NA NA 10.1007/s00438-011-0658-4 22160318 1 C.sinensis_v2.0_HZAU_csi t2711.M000044.1 t2711 IDAtGRC 1 Others t2711.G001 Hazu_V2.0 chr9 GGCAATGAAAACAATGAGAT 10879419 10879438 TTTCAAGATTGTTGGTCCTC 10879624 10879605 NA NA NA 10.1007/s00438-011-0658-4 22160318 1 C.sinensis_v2.0_HZAU_csi t2711.M000045.1 t2711 IDAVP 1 Others t2711.G001 Hazu_V2.0 chr4 GGAGACAGGCATAAAACATC 3116707 3116726 CAGCTATTGGAAAGGTTTGT 3116860 3116841 NA NA NA 10.1007/s00438-011-0658-4 22160318 1 C.sinensis_v2.0_HZAU_csi t2711.M000058.1 t2711 TRPA 1 Others t2711.G001 Hazu_V2.0 chr2 CGGTCATTGAAGAGTGCTCCCC 784860 784881 GGCGCCACTCCTACCTTCCC 786168 786149 NA NA NA 10.1007/s00438-011-0658-4 22160318 1 C.sinensis_v2.0_HZAU_csi t2711.M000059.1 t2711 PEPC 1 Others t2711.G001 Hazu_V2.0 chr2 AGCCAATGGGATTTCTGACA 12327612 12327631 GCCAAGCCACACAGGTAAAT 12329725 12329706 NA NA NA 10.1007/s00438-011-0658-4 22160318 1 C.sinensis_v2.0_HZAU_csi t2711.M000060.1 t2711 LCY2 1 Others t2711.G001 Hazu_V2.0 chr8 GCATGGCAACTCTTCTTAGCCCG 17814688 17814710 AGCTCGCAAGTAAGGCTCATTCCC 17815523 17815500 NA NA NA 10.1007/s00438-011-0658-4 22160318 1 C.sinensis_v2.0_HZAU_csi t2711.M000061.1 t2711 HYB 1 Others t2711.G001 Hazu_V2.0 chr9 AGCCCTTCTGTCTCCTCACA 18247079 18247098 CCGTGGAATTTATCCGAGTG 18248547 18248528 NA NA NA 10.1007/s00438-011-0658-4 22160318 1 C.sinensis_v2.0_HZAU_csi t2711.M000062.1 t2711 PSY 1 Others t2711.G001 Hazu_V2.0 chr6 CGGGCGTAAGAGGGATTTTGC 16882530 16882550 GCTCGTTGATGGGCCTAATGC 16884676 16884656 NA NA NA 10.1007/s00438-011-0658-4 22160318 1 C.sinensis_v2.0_HZAU_csi t2711.M000063.1 t2711 CAX 1 Others t2711.G001 Hazu_V2.0 chr7 CCTCTCTCTCTTCTTTACCG 4377008 4377027 GTTGCTGATGCTACAGATG 4378492 4378474 NA NA NA 10.1007/s00438-011-0658-4 22160318 1 C.sinensis_v2.0_HZAU_csi t2711.M000064.1 t2711 AtGRC 1 Others t2711.G001 Hazu_V2.0 chr9 CATGCGGAAAAGATGTACC 10879276 10879294 CAGCAAGGCTGTCCATAAC 10881297 10881279 NA NA NA 10.1007/s00438-011-0658-4 22160318 1 C.sinensis_v2.0_HZAU_csi t2711.M000065.1 t2711 AVP 1 Others t2711.G001 Hazu_V2.0 chr4 CAGGCTCCTGTCTGTTTGAG 3115785 3115804 GCATATGCTCCCATCAGTG 3116969 3116951 NA NA NA 10.1007/s00438-011-0658-4 22160318 1 C.sinensis_v2.0_HZAU_csi t2711.M000118.1 t2711 Csnp14172 1 Others t2711.G001 Hazu_V2.0 chr7 GGTAAATCTGTCCCGGGTTT 30361629 30361648 GAGTTCGGGTTCACACATCA 30361926 30361907 NA CCTGGTTGGGGG[-/G]GTGCTTTGGGTT [27 citrus cultivars or biotypes] NA " Forward primer: GGTAAATCTGTCCCGGGTTT, SBE primer: GGCCCTGGTTGGGGG" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000120.1 t2711 Csnp14219 1 Others t2711.G001 Hazu_V2.0 chr3 CAACGCACTCTTTGCATCAT 25932623 25932642 AGCGTGCGTCAGATCTTCA 25934398 25934380 NA GTCAGATCTTCA[A/C]TAATAGCCGCCG [27 citrus cultivars or biotypes] NA " Forward primer: AGCGTGCGTCAGATCTTCA, SBE primer: TTGGCGGCGGCTATTA" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000121.1 t2711 Csnp2300 1 Others t2711.G001 Hazu_V2.0 chr2 TGTCTAGCAGGAGCCTGTCC 16028667 16028686 TCCTCACGTGATCCACACTC 16030336 16030317 NA TTGACAAATGGC[-/G]CCAGCGGCAGCA [27 citrus cultivars or biotypes] NA " Forward primer: TCCTCACGTGATCCACACTC, SBE primer: AGATGCTGCCGCTGGA" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000122.1 t2711 Csnp4426 1 Others t2711.G001 Hazu_V2.0 chr3 TTGAGCCTGAGATTCGGAAC 5442115 5442134 TCCTCTTCCTTGCTGTTGCT 5443821 5443804 NA GAAGGAGAAAGC[-/A]CATGGGAGGAGG [27 citrus cultivars or biotypes] NA " Forward primer: TTGAGCCTGAGATTCGGAAC, SBE primer: CAGGCCTCCTCCCATGA" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000123.1 t2711 Csnp935 1 Others t2711.G001 Hazu_V2.0 chr1 GGTGGTTACCTCCTCCATGA 27380550 27380569 GAGCATCATGTTGGTGATCG 27381664 27381645 NA TGGCTGCAGAGC[T/G]ATGATTGGGCAG [27 citrus cultivars or biotypes] NA " Forward primer: GAGCATCATGTTGGTGATCG, SBE primer: GCAACCTGCCCAATCAT" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000125.1 t2711 Csnp13119 1 Others t2711.G001 Hazu_V2.0 chr6 ATCTTGGCCTTGACGTTGTC 4449473 4449492 AAAACCCTAACCGGCAAGAC 4449823 4449804 NA GCTGATCTTCGC[A/C]GGAAAGCAACTC [27 citrus cultivars or biotypes] NA " Forward primer: AAAACCCTAACCGGCAAGAC, SBE primer: GCAGAGGCTGATCTTCGC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000126.1 t2711 Csnp13894 1 Others t2711.G001 Hazu_V2.0 chr5 ACGTTGGTTTCCATTGTTGG 12292572 12292591 GCAATGGCTTTGAAATTCGT 12293888 12293869 NA AAAGGCCTCCAT[C/A]TCCAACAATGGA [27 citrus cultivars or biotypes] NA " Forward primer: GCAATGGCTTTGAAATTCGT, SBE primer: CCAGCAAAAGGCCTCCAT" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000127.1 t2711 Csnp5855 1 Others t2711.G001 Hazu_V2.0 chr9 GGTTCATTTCCCATTCATCG 12018352 12018371 GCCTTGTGGTAGCTTTCGAG 12019642 12019623 NA CACGGCCCAGAC[A/G]GTTGGCACACAG [27 citrus cultivars or biotypes] NA " Forward primer: GGTTCATTTCCCATTCATCG, SBE primer: TTCGAGCTGTGTGCCAAC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000128.1 t2711 Csnp12786 1 Others t2711.G001 Hazu_V2.0 chr6 CTTTTTCCTTCTCGCTGTCG 10425138 10425157 GATGGTGACGGACTGTTTGA 10425441 10425422 NA TATAATGGACGT[C/A]GTTACTCCCGAG [27 citrus cultivars or biotypes] NA " Forward primer: CTTTTTCCTTCTCGCTGTCG, SBE primer: CGTTACTCCCGAGCAAGC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000129.1 t2711 Csnp14053 1 Others t2711.G001 Hazu_V2.0 chrUn TCTCACTGAGGCTCCCCTTA 34010714 34010733 GCTCAGCAGTTGTGGTGAAA 34011533 34011514 NA CTTACAGACGCC[C/-]TTATGAAAATCT [27 citrus cultivars or biotypes] NA " Forward primer: TCTCACTGAGGCTCCCCTTA, SBE primer: CGTGACCTTACAGACGCC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000131.1 t2711 Csnp9479 1 Others t2711.G001 Hazu_V2.0 chr8 CATAAGTCATCGTGGCTGGA 20872918 20872937 CCTCCTACGGCGTCTCTCTA 20873217 20873198 NA CGTCTGTCCGGT[A/G]GTGGGTTGTCGC [27 citrus cultivars or biotypes] NA " Forward primer: CCTCCTACGGCGTCTCTCTA, SBE primer: CAAGGGCGTCTGTCCGGT" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000132.1 t2711 Csnp13849 1 Others t2711.G001 Hazu_V2.0 chr5 GAGGAAAAGCCTTCAAAGCA 32217325 32217344 CAACAAGGGGTTTGGCTTTA 32217623 32217604 NA TAGAATGAGCAC[-/C]GAAGGAACAGGG [27 citrus cultivars or biotypes] NA " Forward primer: GAGGAAAAGCCTTCAAAGCA, SBE primer: GCACTGAAGGAACAGGGC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000133.1 t2711 Csnp10484 1 Others t2711.G001 Hazu_V2.0 chr9 CTTTGACGAGCGTCTGTTGG 7703190 7703209 GAATCTGTTGACGGTGGTGA 7703487 7703468 NA GCATCTGTGGCC[C/T]CTGCAGTTTACT [27 citrus cultivars or biotypes] NA " Forward primer: GAATCTGTTGACGGTGGTGA, SBE primer: CCTTCTGCATCTGTGGCC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000134.1 t2711 Csnp9105 1 Others t2711.G001 Hazu_V2.0 chr1 ATTCCGTGGATTTTTGTGGA 27836650 27836669 ATGCCTCTCAACCCACACAT 27837688 27837669 NA CAAGAAGAGCCA[A/G]GTAGGCCAGGTG [27 citrus cultivars or biotypes] NA " Forward primer: ATTCCGTGGATTTTTGTGGA, SBE primer: GACACCCAAGAAGAGCCA" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000135.1 t2711 Csnp5122 1 Others t2711.G001 Hazu_V2.0 chrUn CCGGCATATCCTACTCCAAA 7003567 7003586 CCAGTAATCCTCGCCATCAT 7004070 7004051 NA TACAAACACATC[A/C]CAGGCGATGTAA [27 citrus cultivars or biotypes] NA " Forward primer: CCGGCATATCCTACTCCAAA, SBE primer: CCCCCATTACATCGCCTG" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000137.1 t2711 Csnp12279 1 Others t2711.G001 Hazu_V2.0 chr1 CCTCGAAGAGACCAACAAGG 23091856 23091875 CGTAAGTCAACCGGAGGAAA 23092405 23092386 NA GATTCCGAGGTG[C/T]ATGGCTCTGGAT [27 citrus cultivars or biotypes] NA " Forward primer: CGTAAGTCAACCGGAGGAAA, SBE primer: GTTTCCAGAGCCATGCAGT" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000138.1 t2711 Csnp7721 1 Others t2711.G001 Hazu_V2.0 chr6 TAACATTCAGGGCATCACCA 7466870 7466889 CCACTCGCTAGACACAACCA 7467189 7467170 NA CCTCAAGATCTT[T/C]TTGGAGAACGTC [27 citrus cultivars or biotypes] NA " Forward primer: TAACATTCAGGGCATCACCA, SBE primer: CGCGAATGACGTTCTCCAA" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000139.1 t2711 Csnp17027 1 Others t2711.G001 Hazu_V2.0 chr5 ACGGGATCAAACACAAATCC 13197683 13197702 CCATAATGGCAAATCGGTCT 13198633 13198614 NA TGAAGACCTTGG[A/G]AGGGGAGCTTGG [27 citrus cultivars or biotypes] NA " Forward primer: CCATAATGGCAAATCGGTCT, SBE primer: CTTGTCTCCAAGCTCCCCT" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000141.1 t2711 Csnp15859 1 Others t2711.G001 Hazu_V2.0 chr9 TCAGGAACCTGAAGCACAGA 13716749 13716768 TGATCAGTGAAAGGGCATTG 13717048 13717029 NA TGCCGACTGCTT[A/G]GATGAGATGGGT [27 citrus cultivars or biotypes] NA " Forward primer: TCAGGAACCTGAAGCACAGA, SBE primer: GGGCAATTGCCGACTGCTT" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000142.1 t2711 Csnp7546 1 Others t2711.G001 Hazu_V2.0 chr3 TTTTTGGTCACCCTTTGAGG 21630037 21630056 GGCACTTCTTTCAGGCAAAA 21630337 21630318 NA GCAAATTTCCGA[C/T]GAGACCTGCTCA [27 citrus cultivars or biotypes] NA " Forward primer: GGCACTTCTTTCAGGCAAAA, SBE primer: TGCCAAGTGAGCAGGTCTC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000143.1 t2711 Csnp4693 1 Others t2711.G001 Hazu_V2.0 chr6 CCCCTTTGCCTTTGTCTTCT 17432310 17432329 AACCAAAAATGGATCCACCA 17432615 17432596 NA ACCCCCAATGGA[C/T]TCAGCATCGTCA [27 citrus cultivars or biotypes] NA " Forward primer: CCCCTTTGCCTTTGTCTTCT, SBE primer: TGGACTCAGCATCGTCAGC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000144.1 t2711 Csnp14215 1 Others t2711.G001 Hazu_V2.0 chr7 TTTGAGGGAATCGACAGCTT 14742665 14742684 GCACCACCATGCACTCTCTA 14743346 14743327 NA CTACGGTGAATC[T/A]GCCAATGTGTTT [27 citrus cultivars or biotypes] NA " Forward primer: GCACCACCATGCACTCTCTA, SBE primer: ACGCTGCCTACGGTGAATC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000148.1 t2711 Csnp10903 1 Others t2711.G001 Hazu_V2.0 chr3 CCTCAAGTCGCTCGATAAGG 21857262 21857281 TCACCCTCATATCGGTAGGC 21857668 21857649 NA TGAACGTGATGC[C/G]TTTTTGGCTAAT [27 citrus cultivars or biotypes] NA " Forward primer: CCTCAAGTCGCTCGATAAGG, SBE primer: ATCCTGCTGAACGTGATGC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000149.1 t2711 Csnp11033 1 Others t2711.G001 Hazu_V2.0 chr8 AAGAGTGTGTTGCGGTCTGA 21123805 21123824 TCTGCGATTGCTTTTGTTTG 21124695 21124677 NA TTTCCATGTTGC[T/C]GCTCAAAATTGC [27 citrus cultivars or biotypes] NA " Forward primer: AAGAGTGTGTTGCGGTCTGA, SBE primer: GAACCCAGCAATTTTGAGC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000150.1 t2711 Csnp12559 1 Others t2711.G001 Hazu_V2.0 chr9 GGTTGCTTCAGTTGGGAAGA 453477 453496 ATAGCAGCCTCCTTCAATGC 453779 453760 NA CTTCAATGCCTC[A/G]CTCATTGTAGGA [27 citrus cultivars or biotypes] NA " Forward primer: ATAGCAGCCTCCTTCAATGC, SBE primer: CAGCCTCCTTCAATGCCTC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000151.1 t2711 Csnp4412 1 Others t2711.G001 Hazu_V2.0 chr5 TCATTACTGCCACCGTCAAA 27503160 27503179 CCCCAGTGGCTCCATAGTTA 27504479 27504460 NA TACATCGATCTC[A/G]AGAGGTCTTGGC [27 citrus cultivars or biotypes] NA " Forward primer: TCATTACTGCCACCGTCAAA, SBE primer: CACAAGAGGTCTTGCAGCC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000152.1 t2711 Csnp7551 1 Others t2711.G001 Hazu_V2.0 chr7 ATGAGTGCTGAGGGTGCAG 29977250 29977268 CTCCATGCTCAAGGAAGAGC 29978569 29978550 NA GTGGCTTGGTTT[G/A]GATACAGAGTTT [27 citrus cultivars or biotypes] NA " Forward primer: ATGAGTGCTGAGGGTGCAG, SBE primer: GATGGGTGTGGCTTGGTTT" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000153.1 t2711 Csnp9188 1 Others t2711.G001 Hazu_V2.0 chr6 CAAGCCCAGAGGATCAAAAA 10259768 10259787 CTTTGGTCTGCAGAGGTTCC 10260629 10260610 NA CATTCATGGACG[T/C]TGGGCCATGTTG [27 citrus cultivars or biotypes] NA " Forward primer: CTTTGGTCTGCAGAGGTTCC, SBE primer: GAGTAGCCAACATGGCCCA" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000154.1 t2711 Csnp646 1 Others t2711.G001 Hazu_V2.0 chr9 ACACACCATCACCAACCAGA 7506009 7506028 TCAGCTTTCTTCCCCAAGAG 7506950 7506931 NA CCCAAAAATGCC[-/C]TTCAAGAGGTAC [27 citrus cultivars or biotypes] NA " Forward primer: ACACACCATCACCAACCAGA, SBE primer: CAGAATCCCCAAAAATGCC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000155.1 t2711 Csnp13026 1 Others t2711.G001 Hazu_V2.0 chr8 AGAAGCCGCTGGATCAGTT 2245928 2245946 CATAGTGACACCGCTTGTGG 2246221 2246202 NA GGCTTTCTCTTC[G/T]TACCAGGCCCTT [27 citrus cultivars or biotypes] NA " Forward primer: AGAAGCCGCTGGATCAGTT, SBE primer: GCAACAAGGCTTTCTCTTC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000156.1 t2711 Csnp13281 1 Others t2711.G001 Hazu_V2.0 chr5 CCGATGCTATCCACAGAGGT 14345634 14345653 ACATTGAGGGAATGCCTGTC 14345938 14345919 NA TGAAAGGTCGAA[T/C]GCCTGTCCAGTG [27 citrus cultivars or biotypes] NA " Forward primer: CCGATGCTATCCACAGAGGT, SBE primer: GAATGCCTGTCCAGAGGTTG" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000158.1 t2711 Csnp13912 1 Others t2711.G001 Hazu_V2.0 chrUn TTCTCCTCCCTTTCTCACCA 3649325 3649343 AACCTAGGGTTTGCAGAGAGC 3649796 3649776 NA TCTGTAATCGAA[T/C]CAACAGAAAGCA [27 citrus cultivars or biotypes] NA " Forward primer: AACCTAGGGTTTGCAGAGAGC, SBE primer: TGCCATTTTGCTTTCTGTTG" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000159.1 t2711 Csnp13098 1 Others t2711.G001 Hazu_V2.0 chrUn TTACTGGCCAAGCCTTTTTG 39191719 39191738 ACCACTCAGCTGCGTCCTAC 39192400 39192381 NA GTTTGATTAAAC[A/C]CCGCATTCAGTT [27 citrus cultivars or biotypes] NA " Forward primer: TTACTGGCCAAGCCTTTTTG, SBE primer: TCTGACTCAACTGAATGCGG" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000160.1 t2711 Csnp7682 1 Others t2711.G001 Hazu_V2.0 chr6 CAAAAGCAAAGGCACAACAA 20931752 20931771 CTTGACCGAGTGGGATGAGT 20932054 20932035 NA GCATAAAAGAGA[C/T]GCCAATGGGCAT [27 citrus cultivars or biotypes] NA " Forward primer: CTTGACCGAGTGGGATGAGT, SBE primer: CGGCTGTTGCATAAAAGAGA" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000161.1 t2711 Csnp1898 1 Others t2711.G001 Hazu_V2.0 chr2 TGGAACTGAAGGGTTGGTTC 10195188 10195207 TACACCAGCACCACCAAAAA 10196229 10196210 NA AAGAGGAGGGAA[A/G]ATTGGGCTTTTT [27 citrus cultivars or biotypes] NA " Forward primer: TGGAACTGAAGGGTTGGTTC, SBE primer: GCACCACCAAAAAGCCCAAT" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000162.1 t2711 Csnp11949 1 Others t2711.G001 Hazu_V2.0 chrUn TCCAGGAACACTGCCTACG 10648812 10648830 CATCCTCAGCATTCTGCTTG 10649115 10649096 NA TACGTTTGACCC[G/A]AACCCTGGCACT [27 citrus cultivars or biotypes] NA " Forward primer: CATCCTCAGCATTCTGCTTG, SBE primer: GGCGATGATACGTTTGACCC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000163.1 t2711 Csnp7808 1 Others t2711.G001 Hazu_V2.0 chr8 AACCAACGTGTTCGATCCAT 20763344 20763363 AACTTGCCACTGCTCCTCTC 20763646 20763627 NA TGCTAAGAGGGC[A/G]GGAAAAGTTCCT [27 citrus cultivars or biotypes] NA " Forward primer: AACCAACGTGTTCGATCCAT, SBE primer: AGGTTGAAGAGGGCAGGATT" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000164.1 t2711 Csnp8361 1 Others t2711.G001 Hazu_V2.0 chr7 TTCGACAGCTTGCTGAGATG 14107650 14107669 CCACAAGCATCCGAACACTA 14108158 14108139 NA GAACCCGAAGAC[A/C]TCACTTTGGGAC [27 citrus cultivars or biotypes] NA " Forward primer: TTCGACAGCTTGCTGAGATG, SBE primer: TCAAGCAAGTCCCAAAGTGA" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000165.1 t2711 Csnp8871 1 Others t2711.G001 Hazu_V2.0 chr1 GGTGGAGTGAGGTGCAATTT 19526659 19526678 GCTCTTCACCCCACAAAAAC 19526958 19526939 NA TATGCGTTCAGG[G/-]AACTGATTCCAT [27 citrus cultivars or biotypes] NA " Forward primer: GCTCTTCACCCCACAAAAAC, SBE primer: GGAAGAAATATGCGTTCAGG" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000166.1 t2711 Csnp14169 1 Others t2711.G001 Hazu_V2.0 chr6 AGTCGTACTCGAAGGGCAAA 12323278 12323297 TCGACTCAGCGTCTCCTCTT 12323578 12323559 NA TCTTCCTCGACC[G/A]TCCGATTCTCCC [27 citrus cultivars or biotypes] NA " Forward primer: TCGACTCAGCGTCTCCTCTT, SBE primer: CCATTGAAGGGAGAATCGGA" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000168.1 t2711 Csnp13560 1 Others t2711.G001 Hazu_V2.0 chr2 CCTGCTGGTCCTGCTATTTC 14885737 14885756 TCTCCATTCAGGGTTGTTCC 14886275 14886256 NA AGCCCTCGTTTC[C/A]TTGTCAAAGCTA [27 citrus cultivars or biotypes] NA " Forward primer: TCTCCATTCAGGGTTGTTCC, SBE primer: CCAAGAGAAGCCCTCGTTTC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000169.1 t2711 Csnp16180 1 Others t2711.G001 Hazu_V2.0 chr5 CAAGCCTGGAAACACAACAA 28472367 28472386 CCAATGTTGACGTGGAAGTG 28472666 28472647 NA TCTGCATGAGGG[-/G]GATGTTTTTGTG [27 citrus cultivars or biotypes] NA " Forward primer: CAAGCCTGGAAACACAACAA, SBE primer: ACAAAAGTTCTGCATGAGGG" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000171.1 t2711 Csnp11693 1 Others t2711.G001 Hazu_V2.0 chr9 TGCCACTATCAAGCAACACA 13157756 13157775 GCAAGTCAACCTGCAATGAA 13158056 13158037 NA AGCCTGCTCCTG[C/T]TGCTCAACCAGT [27 citrus cultivars or biotypes] NA " Forward primer: GCAAGTCAACCTGCAATGAA, SBE primer: AGCTGCTGCTCAACTTAATC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000172.1 t2711 Csnp1272 1 Others t2711.G001 Hazu_V2.0 chr8 CTCTTGGTCGCCCAGAATAC 17021779 17021798 AGCCTCGATCCCTTTTCATT 17022442 17022423 NA TCCACAGCCATG[A/G]ATGAAATTCATG [27 citrus cultivars or biotypes] NA " Forward primer: AGCCTCGATCCCTTTTCATT, SBE primer: CAACTGAATCCACAGCCATG" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000173.1 t2711 Csnp13559 1 Others t2711.G001 Hazu_V2.0 chr8 TCTCCACCTCTTCCATCACC 22062170 22062189 TCCTGTTGGCCACTTTCTCT 22063299 22063280 NA GGGAAGTACGTT[T/C]CATAGGATTATT [27 citrus cultivars or biotypes] NA " Forward primer: TCCTGTTGGCCACTTTCTCT, SBE primer: CACTACAAGGGAAGTACGTT" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000174.1 t2711 Csnp13695 1 Others t2711.G001 Hazu_V2.0 chr6 CTCCATGGTCTCACCGTACC 10450249 10450268 AACGTCACTTCCCACGACTC 10450844 10450825 NA CGGCCATCCTAA[T/C]GAGTCGTGGGAA [27 citrus cultivars or biotypes] NA " Forward primer: CTCCATGGTCTCACCGTACC, SBE primer: AACGTCACTTCCCACGACTC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000175.1 t2711 Csnp13876 1 Others t2711.G001 Hazu_V2.0 chr7 GACTGGGAGCCAACAAGTTC 31253867 31253886 AGCTGTGCAGTAAACGAGCA 31254165 31254146 NA GGACTACGTTGA[A/G]CCCCCACCGGCG [27 citrus cultivars or biotypes] NA " Forward primer: GACTGGGAGCCAACAAGTTC, SBE primer: GATGGCAAGGACTACGTTGA" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000176.1 t2711 Csnp16549 1 Others t2711.G001 Hazu_V2.0 chr6 CTTGGCCGATTACAACATCC 5264799 5264818 AAAAATTTGCATGCCTCCAC 5265330 5265311 NA AAAAATCCAAGA[C/T]AAGGAAGGAATT [27 citrus cultivars or biotypes] NA " Forward primer: CTTGGCCGATTACAACATCC, SBE primer: GCCAAGATCCAAGACAAGGA" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000177.1 t2711 Csnp17420 1 Others t2711.G001 Hazu_V2.0 chr7 GGCATCAGGTTCACAATCAA 1647718 1647737 GTGGCTCTAGCGGAATTGAG 1648008 1647989 NA AGCCTGTCATTT[A/G]AGGTCACCACAA [27 citrus cultivars or biotypes] NA " Forward primer: GGCATCAGGTTCACAATCAA, SBE primer: ATGGCCAAAGCCTGTCATTT" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000178.1 t2711 Csnp9671 1 Others t2711.G001 Hazu_V2.0 chr7 TGACACCCACAAAAGCAGAG 17083479 17083498 AATGGAGAGGGAGAGGTTGG 17084365 17084346 NA CATAGACATGGC[C/T]GTTGGTTTCTTG [27 citrus cultivars or biotypes] NA " Forward primer: AATGGAGAGGGAGAGGTTGG, SBE primer: TGAGAAGTCATAGACATGGC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000179.1 t2711 Csnp6947 1 Others t2711.G001 Hazu_V2.0 chr4 GTTTGAGGCCCTCTCCTACC 1883678 1883697 TGCACTGACCCTGTTTCTGA 1884140 1884121 NA GGGAGAATAGCA[A/G]AATGCCAGGGTA [27 citrus cultivars or biotypes] NA " Forward primer: GTTTGAGGCCCTCTCCTACC, SBE primer: TGTGCACAGGGAGAATAGCA" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000180.1 t2711 Csnp4560 1 Others t2711.G001 Hazu_V2.0 chr4 GGTCCACTATCGATGTCCAGA 6230149 6230169 CTCTTCCCCTTCAGTTGCTG 6230448 6230429 NA CTGGTGGAGTGC[C/T]AAGTGATGCAAT [27 citrus cultivars or biotypes] NA " Forward primer: CTCTTCCCCTTCAGTTGCTG, SBE primer: CGATTCCTCTGGTGGAGTGC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000182.1 t2711 Csnp1315 1 Others t2711.G001 Hazu_V2.0 chr4 TAGTGGGCCAAGAGGTTCTC 12973120 12973139 CAAACTGTGCAAAAGCCAAA 12973417 12973400 NA TCCTGATTTGCC[C/T]GGGCTTCATGTC [27 citrus cultivars or biotypes] NA " Forward primer: CAAACTGTGCAAAAGCCAAA, SBE primer: AAAAGTTGTGACATGAAGCCC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000183.1 t2711 Csnp4569 1 Others t2711.G001 Hazu_V2.0 chr7 AAGCCTCGACAAGGTCAAGA 525304 525323 CTGAACTGGGCAGATTAGGG 526045 526026 NA TCTGTACATTGC[C/G]GCAGTGAAAACT [27 citrus cultivars or biotypes] NA " Forward primer: CTGAACTGGGCAGATTAGGG, SBE primer: CAGTGCGTTAGTTTTCACTGC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000184.1 t2711 Csnp15523 1 Others t2711.G001 Hazu_V2.0 chr7 CTCCAGGAATCCAACAGCAT 11533916 11533935 CTCAGCGGCTTCCACTAAAG 11535764 11535745 NA CAGAGCCAAATC[G/T]CCAGTAAAGCGC [27 citrus cultivars or biotypes] NA " Forward primer: CTCAGCGGCTTCCACTAAAG, SBE primer: GAAGAAACCCAGAGCCAAATC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000185.1 t2711 Csnp8105 1 Others t2711.G001 Hazu_V2.0 chr8 CACCACCATAAACCGCCTAT 22161435 22161454 CCAGCATCGGAAAAATCTGT 22162450 22162431 NA AAGCGTCTACTT[G/T]CTAAAGTGGTGC [27 citrus cultivars or biotypes] NA " Forward primer: CACCACCATAAACCGCCTAT, SBE primer: GAACAGCAGGCACCACTTTAG" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000187.1 t2711 Csnp4056 1 Others t2711.G001 Hazu_V2.0 chr4 CCAAGCTTCTCGATCCAAAC 356366 356385 CTTGGCCACCTCTTCAAATC 356664 356645 NA TGACAAGTCATC[G/A]AAGCAACCTGAG [27 citrus cultivars or biotypes] NA " Forward primer: CCAAGCTTCTCGATCCAAAC, SBE primer: ATTTGAAGCTGACAAGTCATC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000189.1 t2711 Csnp9588 1 Others t2711.G001 Hazu_V2.0 chr8 GAGATGACGACGATGACGAA 2461565 2461584 TCCTTCGGGATTAATTGTGG 2461865 2461846 NA CTCTCCCTCTTT[G/C]TCATTCACCACC [27 citrus cultivars or biotypes] NA " Forward primer: TCCTTCGGGATTAATTGTGG, SBE primer: TCCTCTCGTCTCTCCCTCTTT" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000190.1 t2711 Csnp11118 1 Others t2711.G001 Hazu_V2.0 chr9 GAAGCTGGCGTCACAGAGTT 7702440 7702459 ATCCAGTAGGCAATGCAACC 7702860 7702841 NA CTCTTCTATGTT[G/A]TTCAAGGTAGAG [27 citrus cultivars or biotypes] NA " Forward primer: GAAGCTGGCGTCACAGAGTT, SBE primer: CGTGAATGCCTCTACCTTGAA" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000192.1 t2711 Csnp2608 1 Others t2711.G001 Hazu_V2.0 chr5 CTCCCTCACGGAAGACAGAC 29698161 29698180 TCAAGGACGAAGTCGAGGAT 29698545 29698526 NA CACCAACTGTGG[T/C]GTCCAGGACACT [27 citrus cultivars or biotypes] NA " Forward primer: TCAAGGACGAAGTCGAGGAT, SBE primer: CTTCAGAATCACCAACTGTGG" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000193.1 t2711 Csnp13842 1 Others t2711.G001 Hazu_V2.0 chrUn CAAAGTACATGAACGCAAACAAA 58207558 58207580 GTGCACTCGAAGCTAGCAAA 58208017 58207998 NA GAAGCTAGCAAA[T/G]ATCTTTTCTGAC [27 citrus cultivars or biotypes] NA " Forward primer: GTGCACTCGAAGCTAGCAAA, SBE primer: AGTGCACTCGAAGCTAGCAAA" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000195.1 t2711 Csnp17091 1 Others t2711.G001 Hazu_V2.0 chr3 CAGTGGACTCTCCACCTCGT 19842554 19842573 TTCCACTACCACCAACACCA 19842844 19842826 NA CAAGGCTTGGCC[G/A]GTGGGGAAGGAC [27 citrus cultivars or biotypes] NA " Forward primer: CAGTGGACTCTCCACCTCGT, SBE primer: CTGTCACAAGTCCTTCCCCAC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000196.1 t2711 Csnp208 1 Others t2711.G001 Hazu_V2.0 chr8 TTGTTGAGCTCCAAGACGAA 2988456 2988475 GGCTGCCAGTTATCCAAAAA 2989232 2989213 NA CACAAGAGGTTG[G/A]TTGAGTTGGTGA [27 citrus cultivars or biotypes] NA " Forward primer: GGCTGCCAGTTATCCAAAAA, SBE primer: CTCCAACCTTCACCAACTCAA" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000198.1 t2711 Csnp14595 1 Others t2711.G001 Hazu_V2.0 chr7 CAAGCTGCCTTTCAAGTGAC 7196156 7196175 TTCCGTTCTTTGTGATGCTG 7200411 7200392 NA AGTTCAAGCATG[C/G]TCAAAACGCTTG [27 citrus cultivars or biotypes] NA " Forward primer: TTCCGTTCTTTGTGATGCTG, SBE primer: GGTACCTCTCAAGCGTTTTGA" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000200.1 t2711 Csnp7565 1 Others t2711.G001 Hazu_V2.0 chr5 CCAGAAAGCAAAATGCCAAT 2999350 2999369 CTTACTGTGGGTGGGGCTTA 3001215 3001196 NA GATAAGAGTTCC[G/A]TGGCCCTTCCAA [27 citrus cultivars or biotypes] NA " Forward primer: CTTACTGTGGGTGGGGCTTA, SBE primer: TGCTCCCTGGATAAGAGTTCC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000201.1 t2711 Csnp14160 1 Others t2711.G001 Hazu_V2.0 chr1 CAACGTGGAGTAACCGTCCT 8377466 8377485 TGGTACTGTTGCGACTCACC 8377774 8377755 NA AGTGGCTTGAGT[T/A]TTTGGACTGAAG [27 citrus cultivars or biotypes] NA " Forward primer: TGGTACTGTTGCGACTCACC, SBE primer: TCAGCATTAGCTTCAGTCCAAA" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000203.1 t2711 Csnp7988 1 Others t2711.G001 Hazu_V2.0 chr7 TACGGTAGCCACCAACAACA 9620984 9621003 AGACATCCTGCCAAGTACCG 9622883 9622864 NA GCTGCAACAGGA[T/G]CAGTTCAAACCC [27 citrus cultivars or biotypes] NA " Forward primer: TACGGTAGCCACCAACAACA, SBE primer: CTTGCTCAAAGGGTTTGAACTG" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000204.1 t2711 Csnp1762 1 Others t2711.G001 Hazu_V2.0 chr8 CCATCACAGCTTGCATTAGC 8847433 8847452 GCTTGAGGACTGTGCAACAC 8847730 8847711 NA CGAGGTCGAAGA[T/C]GACAGGGTGCTT [27 citrus cultivars or biotypes] NA " Forward primer: GCTTGAGGACTGTGCAACAC, SBE primer: CCATTGGTATCCTGTCATCTTC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000205.1 t2711 Csnp13615 1 Others t2711.G001 Hazu_V2.0 chr5 AGTCGGCGTGAAGATCAAGT 3822025 3822044 ACGCTAAAAAGGGGTGCTTT 3822325 3822306 NA AGATATTCAGAA[A/C]CGTGAGGGTCGT [27 citrus cultivars or biotypes] NA " Forward primer: AGTCGGCGTGAAGATCAAGT, SBE primer: AGACCGAGGAAGATATTCAGAA" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000206.1 t2711 Csnp8491 1 Others t2711.G001 Hazu_V2.0 chr1 AGGCCATGGAAACACAAAAG 3297633 3297652 GCAATGGGAATACGATCCAT 3298721 3298702 NA GGTTTTTGAGCA[T/C]AATGGAAATCAG [27 citrus cultivars or biotypes] NA " Forward primer: AGGCCATGGAAACACAAAAG, SBE primer: TTCCAAGTTGCTGATTTCCATT" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000207.1 t2711 Csnp16360 1 Others t2711.G001 Hazu_V2.0 chr5 GTCCTTGCCCTTCTGTTCTG 5556174 5556191 AGTGGGCGTCTCATCTCCTA 5556654 5556635 NA CAGCACGATTTC[-/C]AGCGTTAGCGGC [27 citrus cultivars or biotypes] NA " Forward primer: AGTGGGCGTCTCATCTCCTA, SBE primer: CATCTCCTAACAGCACGATTTC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000208.1 t2711 Csnp4601 1 Others t2711.G001 Hazu_V2.0 chr3 CATCATTCAACTGGGCTCCT 25521399 25521418 TTCCAATTTGAGGGCTGTTC 25522495 25522476 NA ACTCTGAAGGTA[G/A]CTAAGACTCGGA [27 citrus cultivars or biotypes] NA " Forward primer: CATCATTCAACTGGGCTCCT, SBE primer: CTACCTTCAGAGCATTCCTGGT" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000209.1 t2711 Csnp13112 1 Others t2711.G001 Hazu_V2.0 chr6 AAAATCCTTTGTGGGTGTGC 8566160 8566179 CCTTGAACAGTTTGGGCAAT 8569352 8569333 NA TATCCGAGAATT[A/G]CTTGTCGGTAAG [27 citrus cultivars or biotypes] NA " Forward primer: CCTTGAACAGTTTGGGCAAT, SBE primer: GTTCATCATCCTTACCGACAAG" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000210.1 t2711 Csnp13520 1 Others t2711.G001 Hazu_V2.0 chr7 TTGGCAGAACGAAGAGTTGA 31068300 31068319 GCAGCAAAAAGGAAATTGGA 31068899 31068880 NA CGAGGAGATGAA[G/T]AACTTGACACTC [27 citrus cultivars or biotypes] NA " Forward primer: GCAGCAAAAAGGAAATTGGA, SBE primer: CCTCTTCAAGTTCTTCATCATC" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000211.1 t2711 Csnp13549 1 Others t2711.G001 Hazu_V2.0 chr8 CAAGAGCATGCTGGAAATGA 22240237 22240256 CACCTCCTCCTCCTCCTTCT 22241701 22241682 NA AATCCCAAAAAA[A/-]GAAAGAGGAGAA [27 citrus cultivars or biotypes] NA " Forward primer: CAAGAGCATGCTGGAAATGA, SBE primer: GAAGTTGCTGAATCCCAAAAAA" 10.1186/1471-2164-14-746 24175923 1 C.sinensis_v2.0_HZAU_csi t2711.M000214.1 t2711 4348_sinensis_666 1 Others t2711.G001 Hazu_V2.0 chr6 AGCTCATCGAAGCCATTGAG 10775265 10775284 CCAGCAAATAGTTCAAAATACCC 10775538 10775516 CACAGAAAAGACATGCGCKCATTTAATTTGGCTATAAATGGTAGTAGAGTGCAATTTGCA[G/A]TATGAGCCGCCTCATATCTACTGAGGATTTGGTGGGCGGCTATTCGCAGCGGAGACCCTG A/A [C. clementina (17 cultivars)]; G/A [C. sinensis (33 cultivars)] NA 10.1007/s11032-012-9828-2 NA 1 C.sinensis_v2.0_HZAU_csi t2711.M000220.1 t2711 11856_sinensis_796 1 Others t2711.G001 Hazu_V2.0 chr5 TGGCAACACCAATCTGCTTA 6997370 6997389 TGAATGTTGCAGGGAAGTTG 6998092 6998073 TCACTGAAGTTGACTCCATGTACCGGAGATTCTATGCCAAGAAGCCTGCAGATGYTACCA[A/C]CTGCGAGAATGGGTCACTTGCAAATGGTCACTAAGGGTGATCAAATTATTATTTGTATCG C/C [C. clementina (17 cultivars)]; A/C [C. sinensis (33 cultivars)] NA 10.1007/s11032-012-9828-2 NA 1 C.sinensis_v2.0_HZAU_csi t2711.M000221.1 t2711 4348_sinensis_789 1 Others t2711.G001 Hazu_V2.0 chr6 AGCTCATCGAAGCCATTGAG 10775265 10775284 CCAGCAAATAGTTCAAAATACCC 10775538 10775516 GCCCCATTCCAAAAGCTCTTTGCTTGTATCATCCTTGTGAACAAKTACTTCAATGAAGCA[A/C]AAGCAATCCTTCTTGGGTCCAGTAGCGTTCTCAATGGCTTCGATGAGCTCCTCCTCGCA C/C [C. clementina (17 cultivars)]; A/C [C. sinensis (33 cultivars)] NA 10.1007/s11032-012-9828-2 NA 1 C.sinensis_v2.0_HZAU_csi t2711.M000225.1 t2711 11856_sinensis_790 1 Others t2711.G001 Hazu_V2.0 chr5 TGGCAACACCAATCTGCTTA 6997370 6997389 TGAATGTTGCAGGGAAGTTG 6998092 6998073 ACTATCTCACTGAAGTTGACTCCATGTACCGGAGATTCTATGCCAAGAAGCCTGCAGATG[T/C]TACCAMCTGCGAGAATGGGTCACTTGCAAATGGTCACTAAGGGTGATCAAATTATTATTT C/C [C. clementina (17 cultivars)]; T/C [C. sinensis (33 cultivars)] NA 10.1007/s11032-012-9828-2 NA 1 C.sinensis_v2.0_HZAU_csi t2711.M000226.1 t2711 11856_sinensis_874 1 Others t2711.G001 Hazu_V2.0 chr5 TGGCAACACCAATCTGCTTA 6997370 6997389 TGAATGTTGCAGGGAAGTTG 6998092 6998073 TTGCAAATGGTCACTAAGGGTGATCAAATTATTATTTGTATCGCCCGAATTTGATTCATC[T/C]TGTTCAATNGTTGTTTTTAATTAAGCAGATTGGTGTTGCCAGTACTTAAAAAATATCCGT C/C [C. clementina (17 cultivars)]; T/C [C. sinensis (33 cultivars)] NA 10.1007/s11032-012-9828-2 NA 1 C.sinensis_v2.0_HZAU_csi t2711.M000235.1 t2711 4348_sinensis_711 1 Others t2711.G001 Hazu_V2.0 chr6 AGCTCATCGAAGCCATTGAG 10775265 10775284 CCAGCAAATAGTTCAAAATACCC 10775538 10775516 AGAGTGCAATTTGCARTATGAGCCGCCTCATATCTACTGAGGATTTGGTGGGCGGCTATT[C/G]GCAGCGGAGACCCTGGAGCCCCATTCCAAAAGCTCTTTGCTTGTATCATCCTTGTGAACA G/G [C. clementina (17 cultivars)]; C/G [C. sinensis (33 cultivars)] NA 10.1007/s11032-012-9828-2 NA 1 C.sinensis_v2.0_HZAU_csi t2711.M000237.1 t2711 11856_sinensis_638 1 Others t2711.G001 Hazu_V2.0 chr5 TGGCAACACCAATCTGCTTA 6997370 6997389 TGAATGTTGCAGGGAAGTTG 6998092 6998073 CCTATCTGTTATGAATGTTGCAGGGAAGTTGAAATCAAGGCATGAGTTTCCCCCAGAGAA[T/G]TTTGTGGAAGTCATGAAGCTAATGGAGCATAGATATGGAGCCAAAGACTTTGTAACAAGC G/G [C. clementina (17 cultivars)]; T/G [C. sinensis (33 cultivars)] NA 10.1007/s11032-012-9828-2 NA 1 C.sinensis_v2.0_HZAU_csi t2711.M000238.1 t2711 16032_sinensis_730 1 Others t2711.G001 Hazu_V2.0 chr2 CTGGCACGTGTCCTTTTCTT 10091761 10091780 TTCCTCGCTTTCACCTTCTG 10091929 10091910 GAACTTGAATGCGATGAACCAAGCCCCCAACCCCTGGCACGTGTCCTTTTCTTATGCCCG[T/G]GCACTTCAGAACACTGTTCTTAAGACATGGCAAGGTCGTCCTGAGAATACTGAAGCTGCA G/G [C. clementina (17 cultivars)]; T/G [C. sinensis (33 cultivars)] NA 10.1007/s11032-012-9828-2 NA 1 C.sinensis_v2.0_HZAU_csi t2711.M000239.1 t2711 4348_sinensis_624 1 Others t2711.G001 Hazu_V2.0 chr6 AGCTCATCGAAGCCATTGAG 10775265 10775284 CCAGCAAATAGTTCAAAATACCC 10775538 10775516 ACCAGCAAATAGTTCAAAATACCCAAAACTTAGTAAAGTAACCACAGAAAAGACATGCGC[T/G]CATTTAATTTGGCTATAAATGGTAGTAGAGTGCAATTTGCAGTATGAGCCGCCTCATATC G/G [C. clementina (17 cultivars)]; T/G [C. sinensis (33 cultivars)] NA 10.1007/s11032-012-9828-2 NA 1 C.sinensis_v2.0_HZAU_csi t2711.M000245.1 t2711 4348_sinensis_773 1 Others t2711.G001 Hazu_V2.0 chr6 AGCTCATCGAAGCCATTGAG 10775265 10775284 CCAGCAAATAGTTCAAAATACCC 10775538 10775516 CAGCGGAGACCCTGGAGCCCCATTCCAAAAGCTCTTTGCTTGTATCATCCTTGTGAACAA[T/G]TACTTCAATGAAGCAMAAGCAATCCTTCTTGGGTCCAGTAGCGTTCTCAATGGCTTCGA G/G [C. clementina (17 cultivars)]; T/T [C. sinensis (33 cultivars)] NA 10.1007/s11032-012-9828-2 NA 1 C.sinensis_v2.0_HZAU_csi t2711.M000255.1 t2711 14498_sinensis_431 1 Others t2711.G001 Hazu_V2.0 chrUn CATGGCTGAGCTCCTAAAGC 29862525 29862544 AGGCTTGTGAAATGGCAGAG 29862709 29862690 GGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCAAAACTTTGTTGTC[G/A]CAGCTCAAACCMCATTTTGTGTTCTTTGATTTTACCCATTACTGGTTGCCGGGTCTTGTT G/A [C. clementina (17 cultivars)]; G/A [C. sinensis (33 cultivars)] NA 10.1007/s11032-012-9828-2 NA 1 C.sinensis_v2.0_HZAU_csi t2711.M000256.1 t2711 14498_sinensis_443 1 Others t2711.G001 Hazu_V2.0 chrUn CATGGCTGAGCTCCTAAAGC 29862525 29862544 AGGCTTGTGAAATGGCAGAG 29862709 29862690 AAAGCAAGCCTTGGACCTCATGCAACCACAAATCAAAACTTTGTTGTCRCAGCTCAAACC[A/C]CATTTTGTGTTCTTTGATTTTACCCATTACTGGTTGCCGGGTCTTGTTGGTTCTCAACTT A/C [C. clementina (17 cultivars)]; A/C [C. sinensis (33 cultivars)] NA 10.1007/s11032-012-9828-2 NA 1 C.sinensis_v2.0_HZAU_csi t2711.M000257.1 t2711 8901_sinensis_504 1 Others t2711.G001 Hazu_V2.0 chr7 TGACACCAAAGCCAATTCAA 2704933 2704952 AGGCTCCACGACAAATGAAA 2705150 2705131 TTGGATGATTATTTGTGGCTTCAAATGCCATTCTTCCTTCAAGCTCTCATCAGTGTATAT[G/A]AGAAGAAATTATGTCATTGGGAAATGATCGTAAGTTAATTTACTTCTCGTCGGTCTGGAG G/A [C. clementina (17 cultivars)]; G/A [C. sinensis (33 cultivars)] NA 10.1007/s11032-012-9828-2 NA 1 C.sinensis_v2.0_HZAU_csi t2711.M000283.1 t2711 TRPA 1 Others t2711.G001 Hazu_V2.0 chr2 CGGTCATTGAAGAGTGCTCCCC 784860 784881 GGCGCCACTCCTACCTTCCC 786168 786149 NA NA NA 10.1186/1471-2164-13-13 22233093 1 C.sinensis_v2.0_HZAU_csi t2711.M000284.1 t2711 PKF 1 Others t2711.G001 Hazu_V2.0 chr2 CGCCGACCTCAGTCCCGTC 1007373 1007391 GCTGCACGCCCCATAAGCCG 1009618 1009599 NA NA NA 10.1186/1471-2164-13-13 22233093 1 C.sinensis_v2.0_HZAU_csi t2711.M000285.1 t2711 PSY 1 Others t2711.G001 Hazu_V2.0 chr6 CGGGCGTAAGAGGGATTTTGC 16882530 16882550 GCTCGTTGATGGGCCTAATGC 16884676 16884656 NA NA NA 10.1186/1471-2164-13-13 22233093 1 C.sinensis_v2.0_HZAU_csi t2711.M000286.1 t2711 LCY2 1 Others t2711.G001 Hazu_V2.0 chr8 GCATGGCAACTCTTCTTAGCCCG 17814688 17814710 AGCTCGCAAGTAAGGCTCATTCCC 17815523 17815500 NA NA NA 10.1186/1471-2164-13-13 22233093 1 C.sinensis_v2.0_HZAU_csi t2711.M000287.1 t2711 LCYB 1 Others t2711.G001 Hazu_V2.0 chrUn GAATTCTTGCCCCAAGTTCA 9348054 9348073 TATGGGCCACAAATCTTTCC 9349259 9349240 NA NA NA 10.1186/1471-2164-13-13 22233093 1 C.sinensis_v2.0_HZAU_csi t2711.M000288.1 t2711 AOC 1 Others t2711.G001 Hazu_V2.0 chr6 TCAGTGAGAACCCTAAAGC 20557471 20557489 CAGTACAACCCCAGTAAGC 20558271 20558253 NA NA NA 10.1186/1471-2164-13-13 22233093 1 C.sinensis_v2.0_HZAU_csi t2711.M000289.1 t2711 HKT1 1 Others t2711.G001 Hazu_V2.0 chr5 GTCCATGGAGAAAAAGAACC 25755598 25755617 TGCTAGTGTCCGTGAAGAAG 25756612 25756593 NA NA NA 10.1186/1471-2164-13-13 22233093 1 C.sinensis_v2.0_HZAU_csi t2711.M000290.1 t2711 TS 1 Others t2711.G001 Hazu_V2.0 chr4 TGCAGAACCTGTAATGAAGC 1297592 1297611 CTGGTAGGATGCCGACTTAG 1298234 1298215 NA NA NA 10.1186/1471-2164-13-13 22233093 1 C.sinensis_v2.0_HZAU_csi t2711.M000291.1 t2711 CAX1 1 Others t2711.G001 Hazu_V2.0 chr7 CCTCTCTCTCTTCTTTACCG 4377008 4377027 GTTGCTGATGCTACAGATG 4378492 4378474 NA NA NA 10.1186/1471-2164-13-13 22233093 1 C.sinensis_v2.0_HZAU_csi