# Assembly Statistics Report
# Assembly name:  EGFV_Vit.rip_1.0
# Organism name:  Vitis riparia (eudicots)
# Infraspecific name:  cultivar=Riparia Gloire de Montpellier
# Isolate:  1030
# Taxid:          96939
# BioSample:      SAMN10662253
# BioProject:     PRJNA512170
# Submitter:      Bordeaux University
# Date:           2019-04-16
# Assembly type:  haploid
# Release type:   major
# Assembly level: Chromosome
# Genome representation: full
# WGS project:    SJAQ01
# Assembly method: FALCON-Unzip v. v0.3.0; Supernova v. v2.1.0
# Expected final version: yes
# Genome coverage: 335.0x
# Sequencing technology: Illumina HiSeq; PacBio RSII; 10X Chromium Genomics
# RefSeq category: Representative Genome
# GenBank assembly accession: GCA_004353265.1
# RefSeq assembly accession: GCF_004353265.1
# RefSeq assembly and GenBank assemblies identical: no
# Reporting on RefSeq assembly.
#
## Assembly-Units:
## GenBank Unit Accession	RefSeq Unit Accession	Assembly-Unit name
## GCA_004353275.1	GCF_004353275.1	Primary Assembly
## 	GCF_013202005.1	non-nuclear
#
# Statistic Types
# Statistic	Description
# component-count	Number of unique components
# contig-L50	Number of contigs that are longer than, or equal to, the N50 length
# contig-N50	Contig length at which 50% of total bases in assembly are in contigs of that length or greater
# contig-count	Number of contigs
# molecule-count	Number of chromosomes and plasmids in full assembly
# region-count	Number of genomic regions defined in full assembly
# spanned-gaps	Number of spanned gaps. Spanned gaps are gaps within a scaffold
# top-level-count	Number of chromosomes or plasmids, unplaced/unlocalized scaffolds, alt-loci scaffolds, and patch scaffolds
# total-gap-length	Total length of gaps
# total-length	Total sequence length including bases and gaps
# ungapped-length	Total length excluding gaps
# unspanned-gaps	Number of unspanned gaps. Unspanned gaps are gaps between scaffolds
#
# Sequence-type Description
# all	statistic covers all the sequences in the unit-assembly and molecule(s) specified.
# molecule	statistic covers the specified molecule. molecule-name and molecule-type/loc will be given.
# unlocalized	statistic covers the sequences assigned to a molecule but with no position. molecule-name and molecule-type/loc will be given.
# unplaced	statistic covers the sequences not assigned to any molecule in the assembly.
#
# unit-name	molecule-name	molecule-type/loc	sequence-type	statistic	value
all	all	all	all	total-length	500266779
all	all	all	all	spanned-gaps	986
all	all	all	all	unspanned-gaps	0
all	all	all	all	region-count	0
all	all	all	all	contig-count	1161
all	all	all	all	contig-N50	738826
all	all	all	all	contig-L50	197
all	all	all	all	total-gap-length	6066668
all	all	all	all	molecule-count	20
all	all	all	all	top-level-count	175
all	all	all	all	component-count	175
Primary Assembly	all	all	all	total-length	500105807
Primary Assembly	all	all	all	ungapped-length	494039139
Primary Assembly	all	all	all	spanned-gaps	986
Primary Assembly	all	all	all	unspanned-gaps	0
Primary Assembly	all	all	assembled-molecule	total-length	471203299
Primary Assembly	all	all	assembled-molecule	ungapped-length	465944219
Primary Assembly	all	all	assembled-molecule	spanned-gaps	948
Primary Assembly	all	all	assembled-molecule	unspanned-gaps	0
Primary Assembly	all	all	unlocalized-scaffold	total-length	0
Primary Assembly	all	all	unlocalized-scaffold	ungapped-length	0
Primary Assembly	all	all	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	all	all	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	na	na	unplaced-scaffold	total-length	28902508
Primary Assembly	na	na	unplaced-scaffold	ungapped-length	28094920
Primary Assembly	na	na	unplaced-scaffold	spanned-gaps	38
Primary Assembly	na	na	unplaced-scaffold	unspanned-gaps	0
Primary Assembly	1	Chromosome	all	total-length	24158808
Primary Assembly	1	Chromosome	all	ungapped-length	24065718
Primary Assembly	1	Chromosome	all	spanned-gaps	33
Primary Assembly	1	Chromosome	all	unspanned-gaps	0
Primary Assembly	1	Chromosome	assembled-molecule	total-length	24158808
Primary Assembly	1	Chromosome	assembled-molecule	ungapped-length	24065718
Primary Assembly	1	Chromosome	assembled-molecule	spanned-gaps	33
Primary Assembly	1	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	1	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	1	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	1	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	1	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	2	Chromosome	all	total-length	19595530
Primary Assembly	2	Chromosome	all	ungapped-length	19422262
Primary Assembly	2	Chromosome	all	spanned-gaps	38
Primary Assembly	2	Chromosome	all	unspanned-gaps	0
Primary Assembly	2	Chromosome	assembled-molecule	total-length	19595530
Primary Assembly	2	Chromosome	assembled-molecule	ungapped-length	19422262
Primary Assembly	2	Chromosome	assembled-molecule	spanned-gaps	38
Primary Assembly	2	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	2	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	2	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	2	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	2	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	3	Chromosome	all	total-length	20122253
Primary Assembly	3	Chromosome	all	ungapped-length	19774647
Primary Assembly	3	Chromosome	all	spanned-gaps	44
Primary Assembly	3	Chromosome	all	unspanned-gaps	0
Primary Assembly	3	Chromosome	assembled-molecule	total-length	20122253
Primary Assembly	3	Chromosome	assembled-molecule	ungapped-length	19774647
Primary Assembly	3	Chromosome	assembled-molecule	spanned-gaps	44
Primary Assembly	3	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	3	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	3	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	3	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	3	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	4	Chromosome	all	total-length	24725119
Primary Assembly	4	Chromosome	all	ungapped-length	24612814
Primary Assembly	4	Chromosome	all	spanned-gaps	33
Primary Assembly	4	Chromosome	all	unspanned-gaps	0
Primary Assembly	4	Chromosome	assembled-molecule	total-length	24725119
Primary Assembly	4	Chromosome	assembled-molecule	ungapped-length	24612814
Primary Assembly	4	Chromosome	assembled-molecule	spanned-gaps	33
Primary Assembly	4	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	4	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	4	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	4	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	4	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	5	Chromosome	all	total-length	24447104
Primary Assembly	5	Chromosome	all	ungapped-length	24161943
Primary Assembly	5	Chromosome	all	spanned-gaps	46
Primary Assembly	5	Chromosome	all	unspanned-gaps	0
Primary Assembly	5	Chromosome	assembled-molecule	total-length	24447104
Primary Assembly	5	Chromosome	assembled-molecule	ungapped-length	24161943
Primary Assembly	5	Chromosome	assembled-molecule	spanned-gaps	46
Primary Assembly	5	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	5	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	5	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	5	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	5	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	6	Chromosome	all	total-length	22961179
Primary Assembly	6	Chromosome	all	ungapped-length	22789541
Primary Assembly	6	Chromosome	all	spanned-gaps	31
Primary Assembly	6	Chromosome	all	unspanned-gaps	0
Primary Assembly	6	Chromosome	assembled-molecule	total-length	22961179
Primary Assembly	6	Chromosome	assembled-molecule	ungapped-length	22789541
Primary Assembly	6	Chromosome	assembled-molecule	spanned-gaps	31
Primary Assembly	6	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	6	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	6	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	6	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	6	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	7	Chromosome	all	total-length	30406434
Primary Assembly	7	Chromosome	all	ungapped-length	30077398
Primary Assembly	7	Chromosome	all	spanned-gaps	55
Primary Assembly	7	Chromosome	all	unspanned-gaps	0
Primary Assembly	7	Chromosome	assembled-molecule	total-length	30406434
Primary Assembly	7	Chromosome	assembled-molecule	ungapped-length	30077398
Primary Assembly	7	Chromosome	assembled-molecule	spanned-gaps	55
Primary Assembly	7	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	7	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	7	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	7	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	7	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	8	Chromosome	all	total-length	22709578
Primary Assembly	8	Chromosome	all	ungapped-length	22401833
Primary Assembly	8	Chromosome	all	spanned-gaps	38
Primary Assembly	8	Chromosome	all	unspanned-gaps	0
Primary Assembly	8	Chromosome	assembled-molecule	total-length	22709578
Primary Assembly	8	Chromosome	assembled-molecule	ungapped-length	22401833
Primary Assembly	8	Chromosome	assembled-molecule	spanned-gaps	38
Primary Assembly	8	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	8	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	8	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	8	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	8	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	9	Chromosome	all	total-length	23720873
Primary Assembly	9	Chromosome	all	ungapped-length	23426732
Primary Assembly	9	Chromosome	all	spanned-gaps	57
Primary Assembly	9	Chromosome	all	unspanned-gaps	0
Primary Assembly	9	Chromosome	assembled-molecule	total-length	23720873
Primary Assembly	9	Chromosome	assembled-molecule	ungapped-length	23426732
Primary Assembly	9	Chromosome	assembled-molecule	spanned-gaps	57
Primary Assembly	9	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	9	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	9	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	9	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	9	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	10	Chromosome	all	total-length	23623711
Primary Assembly	10	Chromosome	all	ungapped-length	23266781
Primary Assembly	10	Chromosome	all	spanned-gaps	50
Primary Assembly	10	Chromosome	all	unspanned-gaps	0
Primary Assembly	10	Chromosome	assembled-molecule	total-length	23623711
Primary Assembly	10	Chromosome	assembled-molecule	ungapped-length	23266781
Primary Assembly	10	Chromosome	assembled-molecule	spanned-gaps	50
Primary Assembly	10	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	10	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	10	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	10	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	10	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	11	Chromosome	all	total-length	19822642
Primary Assembly	11	Chromosome	all	ungapped-length	19494917
Primary Assembly	11	Chromosome	all	spanned-gaps	44
Primary Assembly	11	Chromosome	all	unspanned-gaps	0
Primary Assembly	11	Chromosome	assembled-molecule	total-length	19822642
Primary Assembly	11	Chromosome	assembled-molecule	ungapped-length	19494917
Primary Assembly	11	Chromosome	assembled-molecule	spanned-gaps	44
Primary Assembly	11	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	11	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	11	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	11	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	11	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	12	Chromosome	all	total-length	23486479
Primary Assembly	12	Chromosome	all	ungapped-length	23120226
Primary Assembly	12	Chromosome	all	spanned-gaps	65
Primary Assembly	12	Chromosome	all	unspanned-gaps	0
Primary Assembly	12	Chromosome	assembled-molecule	total-length	23486479
Primary Assembly	12	Chromosome	assembled-molecule	ungapped-length	23120226
Primary Assembly	12	Chromosome	assembled-molecule	spanned-gaps	65
Primary Assembly	12	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	12	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	12	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	12	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	12	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	13	Chromosome	all	total-length	29500977
Primary Assembly	13	Chromosome	all	ungapped-length	29255581
Primary Assembly	13	Chromosome	all	spanned-gaps	73
Primary Assembly	13	Chromosome	all	unspanned-gaps	0
Primary Assembly	13	Chromosome	assembled-molecule	total-length	29500977
Primary Assembly	13	Chromosome	assembled-molecule	ungapped-length	29255581
Primary Assembly	13	Chromosome	assembled-molecule	spanned-gaps	73
Primary Assembly	13	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	13	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	13	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	13	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	13	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	14	Chromosome	all	total-length	29866197
Primary Assembly	14	Chromosome	all	ungapped-length	29246288
Primary Assembly	14	Chromosome	all	spanned-gaps	67
Primary Assembly	14	Chromosome	all	unspanned-gaps	0
Primary Assembly	14	Chromosome	assembled-molecule	total-length	29866197
Primary Assembly	14	Chromosome	assembled-molecule	ungapped-length	29246288
Primary Assembly	14	Chromosome	assembled-molecule	spanned-gaps	67
Primary Assembly	14	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	14	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	14	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	14	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	14	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	15	Chromosome	all	total-length	21840695
Primary Assembly	15	Chromosome	all	ungapped-length	21646427
Primary Assembly	15	Chromosome	all	spanned-gaps	50
Primary Assembly	15	Chromosome	all	unspanned-gaps	0
Primary Assembly	15	Chromosome	assembled-molecule	total-length	21840695
Primary Assembly	15	Chromosome	assembled-molecule	ungapped-length	21646427
Primary Assembly	15	Chromosome	assembled-molecule	spanned-gaps	50
Primary Assembly	15	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	15	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	15	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	15	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	15	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	16	Chromosome	all	total-length	23918791
Primary Assembly	16	Chromosome	all	ungapped-length	23586450
Primary Assembly	16	Chromosome	all	spanned-gaps	57
Primary Assembly	16	Chromosome	all	unspanned-gaps	0
Primary Assembly	16	Chromosome	assembled-molecule	total-length	23918791
Primary Assembly	16	Chromosome	assembled-molecule	ungapped-length	23586450
Primary Assembly	16	Chromosome	assembled-molecule	spanned-gaps	57
Primary Assembly	16	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	16	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	16	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	16	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	16	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	17	Chromosome	all	total-length	20875004
Primary Assembly	17	Chromosome	all	ungapped-length	20727547
Primary Assembly	17	Chromosome	all	spanned-gaps	27
Primary Assembly	17	Chromosome	all	unspanned-gaps	0
Primary Assembly	17	Chromosome	assembled-molecule	total-length	20875004
Primary Assembly	17	Chromosome	assembled-molecule	ungapped-length	20727547
Primary Assembly	17	Chromosome	assembled-molecule	spanned-gaps	27
Primary Assembly	17	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	17	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	17	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	17	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	17	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	18	Chromosome	all	total-length	39737400
Primary Assembly	18	Chromosome	all	ungapped-length	39326807
Primary Assembly	18	Chromosome	all	spanned-gaps	84
Primary Assembly	18	Chromosome	all	unspanned-gaps	0
Primary Assembly	18	Chromosome	assembled-molecule	total-length	39737400
Primary Assembly	18	Chromosome	assembled-molecule	ungapped-length	39326807
Primary Assembly	18	Chromosome	assembled-molecule	spanned-gaps	84
Primary Assembly	18	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	18	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	18	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	18	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	18	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	19	Chromosome	all	total-length	25684525
Primary Assembly	19	Chromosome	all	ungapped-length	25540307
Primary Assembly	19	Chromosome	all	spanned-gaps	56
Primary Assembly	19	Chromosome	all	unspanned-gaps	0
Primary Assembly	19	Chromosome	assembled-molecule	total-length	25684525
Primary Assembly	19	Chromosome	assembled-molecule	ungapped-length	25540307
Primary Assembly	19	Chromosome	assembled-molecule	spanned-gaps	56
Primary Assembly	19	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	19	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	19	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	19	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	19	Chromosome	unlocalized-scaffold	unspanned-gaps	0
non-nuclear	all	all	all	total-length	160972
non-nuclear	all	all	all	ungapped-length	160972
non-nuclear	all	all	all	spanned-gaps	0
non-nuclear	all	all	all	unspanned-gaps	0
non-nuclear	all	all	assembled-molecule	total-length	160972
non-nuclear	all	all	assembled-molecule	ungapped-length	160972
non-nuclear	all	all	assembled-molecule	spanned-gaps	0
non-nuclear	all	all	assembled-molecule	unspanned-gaps	0
non-nuclear	all	all	unlocalized-scaffold	total-length	0
non-nuclear	all	all	unlocalized-scaffold	ungapped-length	0
non-nuclear	all	all	unlocalized-scaffold	spanned-gaps	0
non-nuclear	all	all	unlocalized-scaffold	unspanned-gaps	0
non-nuclear	Pltd	Chloroplast	all	total-length	160972
non-nuclear	Pltd	Chloroplast	all	ungapped-length	160972
non-nuclear	Pltd	Chloroplast	all	spanned-gaps	0
non-nuclear	Pltd	Chloroplast	all	unspanned-gaps	0
non-nuclear	Pltd	Chloroplast	assembled-molecule	total-length	160972
non-nuclear	Pltd	Chloroplast	assembled-molecule	ungapped-length	160972
non-nuclear	Pltd	Chloroplast	assembled-molecule	spanned-gaps	0
non-nuclear	Pltd	Chloroplast	assembled-molecule	unspanned-gaps	0
non-nuclear	Pltd	Chloroplast	unlocalized-scaffold	total-length	0
non-nuclear	Pltd	Chloroplast	unlocalized-scaffold	ungapped-length	0
non-nuclear	Pltd	Chloroplast	unlocalized-scaffold	spanned-gaps	0
non-nuclear	Pltd	Chloroplast	unlocalized-scaffold	unspanned-gaps	0