# Assembly Statistics Report # Assembly name: WEW_v2.0 # Organism name: Triticum dicoccoides (wild emmer wheat) # Infraspecific name: ecotype=Zavitan # Isolate: Atlit2015 # Taxid: 85692 # BioSample: SAMN04448013 # BioProject: PRJNA310175 # Submitter: WEWseq consortium # Date: 2019-02-04 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: LSYQ02 # Assembly method: DenovoMAGIC v. 2 # Expected final version: no # Genome coverage: 176.0x # Sequencing technology: Illumina HiSeq # RefSeq category: Representative Genome # GenBank assembly accession: GCA_002162155.2 # RefSeq assembly accession: GCF_002162155.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_002162165.2 GCF_002162165.1 Primary Assembly # # Statistic Types # Statistic Description # component-count Number of unique components # contig-L50 Number of contigs that are longer than, or equal to, the N50 length # contig-N50 Contig length at which 50% of total bases in assembly are in contigs of that length or greater # contig-count Number of contigs # molecule-count Number of chromosomes and plasmids in full assembly # region-count Number of genomic regions defined in full assembly # spanned-gaps Number of spanned gaps. Spanned gaps are gaps within a scaffold # top-level-count Number of chromosomes or plasmids, unplaced/unlocalized scaffolds, alt-loci scaffolds, and patch scaffolds # total-gap-length Total length of gaps # total-length Total sequence length including bases and gaps # ungapped-length Total length excluding gaps # unspanned-gaps Number of unspanned gaps. Unspanned gaps are gaps between scaffolds # # Sequence-type Description # all statistic covers all the sequences in the unit-assembly and molecule(s) specified. # molecule statistic covers the specified molecule. molecule-name and molecule-type/loc will be given. # unlocalized statistic covers the sequences assigned to a molecule but with no position. molecule-name and molecule-type/loc will be given. # unplaced statistic covers the sequences not assigned to any molecule in the assembly. # # unit-name molecule-name molecule-type/loc sequence-type statistic value all all all all total-length 10677929594 all all all all spanned-gaps 344768 all all all all unspanned-gaps 0 all all all all region-count 0 all all all all contig-count 493164 all all all all contig-N50 57364 all all all all contig-L50 53285 all all all all total-gap-length 353856019 all all all all molecule-count 14 all all all all top-level-count 148396 all all all all component-count 148396 Primary Assembly all all all total-length 10677929594 Primary Assembly all all all ungapped-length 10324073575 Primary Assembly all all all spanned-gaps 344768 Primary Assembly all all all unspanned-gaps 0 Primary Assembly all all assembled-molecule total-length 10330552199 Primary Assembly all all assembled-molecule ungapped-length 9995174523 Primary Assembly all all assembled-molecule spanned-gaps 331740 Primary Assembly all all assembled-molecule unspanned-gaps 0 Primary Assembly all all unlocalized-scaffold total-length 0 Primary Assembly all all unlocalized-scaffold ungapped-length 0 Primary Assembly all all unlocalized-scaffold spanned-gaps 0 Primary Assembly all all unlocalized-scaffold unspanned-gaps 0 Primary Assembly na na unplaced-scaffold total-length 347377395 Primary Assembly na na unplaced-scaffold ungapped-length 328899052 Primary Assembly na na unplaced-scaffold spanned-gaps 13028 Primary Assembly na na unplaced-scaffold unspanned-gaps 0 Primary Assembly 1A Chromosome all total-length 609493238 Primary Assembly 1A Chromosome all ungapped-length 589191139 Primary Assembly 1A Chromosome all spanned-gaps 18485 Primary Assembly 1A Chromosome all unspanned-gaps 0 Primary Assembly 1A Chromosome assembled-molecule total-length 609493238 Primary Assembly 1A Chromosome assembled-molecule ungapped-length 589191139 Primary Assembly 1A Chromosome assembled-molecule spanned-gaps 18485 Primary Assembly 1A Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 1A Chromosome unlocalized-scaffold total-length 0 Primary Assembly 1A Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 1A Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 1A Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 1B Chromosome all total-length 712626289 Primary Assembly 1B Chromosome all ungapped-length 683358120 Primary Assembly 1B Chromosome all spanned-gaps 23695 Primary Assembly 1B Chromosome all unspanned-gaps 0 Primary Assembly 1B Chromosome assembled-molecule total-length 712626289 Primary Assembly 1B Chromosome assembled-molecule ungapped-length 683358120 Primary Assembly 1B Chromosome assembled-molecule spanned-gaps 23695 Primary Assembly 1B Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 1B Chromosome unlocalized-scaffold total-length 0 Primary Assembly 1B Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 1B Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 1B Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 2A Chromosome all total-length 788782410 Primary Assembly 2A Chromosome all ungapped-length 766375931 Primary Assembly 2A Chromosome all spanned-gaps 23892 Primary Assembly 2A Chromosome all unspanned-gaps 0 Primary Assembly 2A Chromosome assembled-molecule total-length 788782410 Primary Assembly 2A Chromosome assembled-molecule ungapped-length 766375931 Primary Assembly 2A Chromosome assembled-molecule spanned-gaps 23892 Primary Assembly 2A Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 2A Chromosome unlocalized-scaffold total-length 0 Primary Assembly 2A Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 2A Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 2A Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 2B Chromosome all total-length 825750385 Primary Assembly 2B Chromosome all ungapped-length 798504965 Primary Assembly 2B Chromosome all spanned-gaps 27060 Primary Assembly 2B Chromosome all unspanned-gaps 0 Primary Assembly 2B Chromosome assembled-molecule total-length 825750385 Primary Assembly 2B Chromosome assembled-molecule ungapped-length 798504965 Primary Assembly 2B Chromosome assembled-molecule spanned-gaps 27060 Primary Assembly 2B Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 2B Chromosome unlocalized-scaffold total-length 0 Primary Assembly 2B Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 2B Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 2B Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 3A Chromosome all total-length 767616973 Primary Assembly 3A Chromosome all ungapped-length 747178907 Primary Assembly 3A Chromosome all spanned-gaps 23036 Primary Assembly 3A Chromosome all unspanned-gaps 0 Primary Assembly 3A Chromosome assembled-molecule total-length 767616973 Primary Assembly 3A Chromosome assembled-molecule ungapped-length 747178907 Primary Assembly 3A Chromosome assembled-molecule spanned-gaps 23036 Primary Assembly 3A Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 3A Chromosome unlocalized-scaffold total-length 0 Primary Assembly 3A Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 3A Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 3A Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 3B Chromosome all total-length 865950040 Primary Assembly 3B Chromosome all ungapped-length 834300602 Primary Assembly 3B Chromosome all spanned-gaps 29307 Primary Assembly 3B Chromosome all unspanned-gaps 0 Primary Assembly 3B Chromosome assembled-molecule total-length 865950040 Primary Assembly 3B Chromosome assembled-molecule ungapped-length 834300602 Primary Assembly 3B Chromosome assembled-molecule spanned-gaps 29307 Primary Assembly 3B Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 3B Chromosome unlocalized-scaffold total-length 0 Primary Assembly 3B Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 3B Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 3B Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 4A Chromosome all total-length 751837965 Primary Assembly 4A Chromosome all ungapped-length 724085122 Primary Assembly 4A Chromosome all spanned-gaps 23670 Primary Assembly 4A Chromosome all unspanned-gaps 0 Primary Assembly 4A Chromosome assembled-molecule total-length 751837965 Primary Assembly 4A Chromosome assembled-molecule ungapped-length 724085122 Primary Assembly 4A Chromosome assembled-molecule spanned-gaps 23670 Primary Assembly 4A Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 4A Chromosome unlocalized-scaffold total-length 0 Primary Assembly 4A Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 4A Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 4A Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 4B Chromosome all total-length 684047826 Primary Assembly 4B Chromosome all ungapped-length 666197415 Primary Assembly 4B Chromosome all spanned-gaps 21400 Primary Assembly 4B Chromosome all unspanned-gaps 0 Primary Assembly 4B Chromosome assembled-molecule total-length 684047826 Primary Assembly 4B Chromosome assembled-molecule ungapped-length 666197415 Primary Assembly 4B Chromosome assembled-molecule spanned-gaps 21400 Primary Assembly 4B Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 4B Chromosome unlocalized-scaffold total-length 0 Primary Assembly 4B Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 4B Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 4B Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 5A Chromosome all total-length 715386202 Primary Assembly 5A Chromosome all ungapped-length 694794407 Primary Assembly 5A Chromosome all spanned-gaps 21687 Primary Assembly 5A Chromosome all unspanned-gaps 0 Primary Assembly 5A Chromosome assembled-molecule total-length 715386202 Primary Assembly 5A Chromosome assembled-molecule ungapped-length 694794407 Primary Assembly 5A Chromosome assembled-molecule spanned-gaps 21687 Primary Assembly 5A Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 5A Chromosome unlocalized-scaffold total-length 0 Primary Assembly 5A Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 5A Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 5A Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 5B Chromosome all total-length 726095352 Primary Assembly 5B Chromosome all ungapped-length 704902457 Primary Assembly 5B Chromosome all spanned-gaps 24722 Primary Assembly 5B Chromosome all unspanned-gaps 0 Primary Assembly 5B Chromosome assembled-molecule total-length 726095352 Primary Assembly 5B Chromosome assembled-molecule ungapped-length 704902457 Primary Assembly 5B Chromosome assembled-molecule spanned-gaps 24722 Primary Assembly 5B Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 5B Chromosome unlocalized-scaffold total-length 0 Primary Assembly 5B Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 5B Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 5B Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 6A Chromosome all total-length 633698003 Primary Assembly 6A Chromosome all ungapped-length 616090333 Primary Assembly 6A Chromosome all spanned-gaps 19016 Primary Assembly 6A Chromosome all unspanned-gaps 0 Primary Assembly 6A Chromosome assembled-molecule total-length 633698003 Primary Assembly 6A Chromosome assembled-molecule ungapped-length 616090333 Primary Assembly 6A Chromosome assembled-molecule spanned-gaps 19016 Primary Assembly 6A Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 6A Chromosome unlocalized-scaffold total-length 0 Primary Assembly 6A Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 6A Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 6A Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 6B Chromosome all total-length 724204431 Primary Assembly 6B Chromosome all ungapped-length 699071820 Primary Assembly 6B Chromosome all spanned-gaps 23980 Primary Assembly 6B Chromosome all unspanned-gaps 0 Primary Assembly 6B Chromosome assembled-molecule total-length 724204431 Primary Assembly 6B Chromosome assembled-molecule ungapped-length 699071820 Primary Assembly 6B Chromosome assembled-molecule spanned-gaps 23980 Primary Assembly 6B Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 6B Chromosome unlocalized-scaffold total-length 0 Primary Assembly 6B Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 6B Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 6B Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 7A Chromosome all total-length 747227478 Primary Assembly 7A Chromosome all ungapped-length 721432228 Primary Assembly 7A Chromosome all spanned-gaps 24516 Primary Assembly 7A Chromosome all unspanned-gaps 0 Primary Assembly 7A Chromosome assembled-molecule total-length 747227478 Primary Assembly 7A Chromosome assembled-molecule ungapped-length 721432228 Primary Assembly 7A Chromosome assembled-molecule spanned-gaps 24516 Primary Assembly 7A Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 7A Chromosome unlocalized-scaffold total-length 0 Primary Assembly 7A Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 7A Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 7A Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 7B Chromosome all total-length 777835607 Primary Assembly 7B Chromosome all ungapped-length 749691077 Primary Assembly 7B Chromosome all spanned-gaps 27274 Primary Assembly 7B Chromosome all unspanned-gaps 0 Primary Assembly 7B Chromosome assembled-molecule total-length 777835607 Primary Assembly 7B Chromosome assembled-molecule ungapped-length 749691077 Primary Assembly 7B Chromosome assembled-molecule spanned-gaps 27274 Primary Assembly 7B Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 7B Chromosome unlocalized-scaffold total-length 0 Primary Assembly 7B Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 7B Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 7B Chromosome unlocalized-scaffold unspanned-gaps 0