# Assembly Statistics Report # Assembly name: ASM2255984v1 # Organism name: Amorphophallus konjac (monocots) # Infraspecific name: ecotype=Fuyuan # Isolate: FY2019 # Taxid: 78372 # BioSample: SAMN19687746 # BioProject: PRJNA734512 # Submitter: Center for Yunnan Plateau Biological Resources Protection and Utilization # Date: 2022-03-14 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAHNEJ01 # Assembly method: FALCON v. 3.0 # Expected final version: yes # Genome coverage: 100.0x # Sequencing technology: PacBio Sequel # RefSeq category: Representative Genome # GenBank assembly accession: GCA_022559845.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_022559895.1 Primary Assembly # # Statistic Types # Statistic Description # component-count Number of unique components # contig-L50 Number of contigs that are longer than, or equal to, the N50 length # contig-N50 Contig length at which 50% of total bases in assembly are in contigs of that length or greater # contig-count Number of contigs # gc-perc gc-count/atgc-count as percentage # molecule-count Number of chromosomes and plasmids in full assembly # region-count Number of genomic regions defined in full assembly # scaffold-L50 Number of scaffolds that are longer than, or equal to, the N50 length # scaffold-N50 Scaffold length at which 50% of total bases in assembly are in scaffolds of that length or greater # scaffold-N75 Scaffold length at which 75% of total bases in assembly are in contigs of that length or greater # scaffold-N90 scaffold length at which 90% of total bases in assembly are in contigs of that length or greater # scaffold-count Number of scaffolds # spanned-gaps Number of spanned gaps. Spanned gaps are gaps within a scaffold # top-level-count Number of chromosomes or plasmids, unplaced/unlocalized scaffolds, alt-loci scaffolds, and patch scaffolds # total-gap-length Total length of gaps # total-length Total sequence length including bases and gaps # ungapped-length Total length excluding gaps # unspanned-gaps Number of unspanned gaps. Unspanned gaps are gaps between scaffolds # # Sequence-type Description # all statistic covers all the sequences in the unit-assembly and molecule(s) specified. # molecule statistic covers the specified molecule. molecule-name and molecule-type/loc will be given. # unlocalized statistic covers the sequences assigned to a molecule but with no position. molecule-name and molecule-type/loc will be given. # unplaced statistic covers the sequences not assigned to any molecule in the assembly. # # unit-name molecule-name molecule-type/loc sequence-type statistic value all all all all total-length 5598555559 all all all all spanned-gaps 4747 all all all all unspanned-gaps 0 all all all all region-count 0 all all all all scaffold-count 3678 all all all all scaffold-N50 419331422 all all all all scaffold-L50 6 all all all all scaffold-N75 313896958 all all all all scaffold-N90 212178970 all all all all contig-count 8425 all all all all contig-N50 1197616 all all all all contig-L50 1354 all all all all total-gap-length 474700 all all all all molecule-count 13 all all all all top-level-count 3678 all all all all component-count 3678 all all all all gc-perc 45.5 Primary Assembly all all all total-length 5598555559 Primary Assembly all all all ungapped-length 5598080859 Primary Assembly all all all scaffold-count 3678 Primary Assembly all all all scaffold-N50 419331422 Primary Assembly all all all spanned-gaps 4747 Primary Assembly all all all unspanned-gaps 0 Primary Assembly all all all gc-perc 45.5 Primary Assembly all all assembled-molecule total-length 5059974131 Primary Assembly all all assembled-molecule ungapped-length 5059499431 Primary Assembly all all assembled-molecule scaffold-count 13 Primary Assembly all all assembled-molecule scaffold-N50 419331422 Primary Assembly all all assembled-molecule spanned-gaps 4747 Primary Assembly all all assembled-molecule unspanned-gaps 0 Primary Assembly all all assembled-molecule gc-perc 45.5 Primary Assembly all all unlocalized-scaffold total-length 0 Primary Assembly all all unlocalized-scaffold ungapped-length 0 Primary Assembly all all unlocalized-scaffold scaffold-count 0 Primary Assembly all all unlocalized-scaffold scaffold-N50 0 Primary Assembly all all unlocalized-scaffold spanned-gaps 0 Primary Assembly all all unlocalized-scaffold unspanned-gaps 0 Primary Assembly na na unplaced-scaffold total-length 538581428 Primary Assembly na na unplaced-scaffold ungapped-length 538581428 Primary Assembly na na unplaced-scaffold scaffold-count 3665 Primary Assembly na na unplaced-scaffold scaffold-N50 203647 Primary Assembly na na unplaced-scaffold spanned-gaps 0 Primary Assembly na na unplaced-scaffold unspanned-gaps 0 Primary Assembly na na unplaced-scaffold gc-perc 46 Primary Assembly 1 Chromosome all total-length 273677367 Primary Assembly 1 Chromosome all ungapped-length 273641967 Primary Assembly 1 Chromosome all scaffold-count 1 Primary Assembly 1 Chromosome all scaffold-N50 273677367 Primary Assembly 1 Chromosome all spanned-gaps 354 Primary Assembly 1 Chromosome all unspanned-gaps 0 Primary Assembly 1 Chromosome all gc-perc 45.5 Primary Assembly 1 Chromosome assembled-molecule total-length 273677367 Primary Assembly 1 Chromosome assembled-molecule ungapped-length 273641967 Primary Assembly 1 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 1 Chromosome assembled-molecule scaffold-N50 273677367 Primary Assembly 1 Chromosome assembled-molecule spanned-gaps 354 Primary Assembly 1 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 1 Chromosome assembled-molecule gc-perc 45.5 Primary Assembly 1 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 1 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 1 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 1 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 1 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 1 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 2 Chromosome all total-length 486841255 Primary Assembly 2 Chromosome all ungapped-length 486805955 Primary Assembly 2 Chromosome all scaffold-count 1 Primary Assembly 2 Chromosome all scaffold-N50 486841255 Primary Assembly 2 Chromosome all spanned-gaps 353 Primary Assembly 2 Chromosome all unspanned-gaps 0 Primary Assembly 2 Chromosome all gc-perc 45.5 Primary Assembly 2 Chromosome assembled-molecule total-length 486841255 Primary Assembly 2 Chromosome assembled-molecule ungapped-length 486805955 Primary Assembly 2 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 2 Chromosome assembled-molecule scaffold-N50 486841255 Primary Assembly 2 Chromosome assembled-molecule spanned-gaps 353 Primary Assembly 2 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 2 Chromosome assembled-molecule gc-perc 45.5 Primary Assembly 2 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 2 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 2 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 2 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 2 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 2 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 3 Chromosome all total-length 360781822 Primary Assembly 3 Chromosome all ungapped-length 360750222 Primary Assembly 3 Chromosome all scaffold-count 1 Primary Assembly 3 Chromosome all scaffold-N50 360781822 Primary Assembly 3 Chromosome all spanned-gaps 316 Primary Assembly 3 Chromosome all unspanned-gaps 0 Primary Assembly 3 Chromosome all gc-perc 45.5 Primary Assembly 3 Chromosome assembled-molecule total-length 360781822 Primary Assembly 3 Chromosome assembled-molecule ungapped-length 360750222 Primary Assembly 3 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 3 Chromosome assembled-molecule scaffold-N50 360781822 Primary Assembly 3 Chromosome assembled-molecule spanned-gaps 316 Primary Assembly 3 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 3 Chromosome assembled-molecule gc-perc 45.5 Primary Assembly 3 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 3 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 3 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 3 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 3 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 3 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 4 Chromosome all total-length 444096054 Primary Assembly 4 Chromosome all ungapped-length 444062554 Primary Assembly 4 Chromosome all scaffold-count 1 Primary Assembly 4 Chromosome all scaffold-N50 444096054 Primary Assembly 4 Chromosome all spanned-gaps 335 Primary Assembly 4 Chromosome all unspanned-gaps 0 Primary Assembly 4 Chromosome all gc-perc 45.5 Primary Assembly 4 Chromosome assembled-molecule total-length 444096054 Primary Assembly 4 Chromosome assembled-molecule ungapped-length 444062554 Primary Assembly 4 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 4 Chromosome assembled-molecule scaffold-N50 444096054 Primary Assembly 4 Chromosome assembled-molecule spanned-gaps 335 Primary Assembly 4 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 4 Chromosome assembled-molecule gc-perc 45.5 Primary Assembly 4 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 4 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 4 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 4 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 4 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 4 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 5 Chromosome all total-length 612111917 Primary Assembly 5 Chromosome all ungapped-length 612058317 Primary Assembly 5 Chromosome all scaffold-count 1 Primary Assembly 5 Chromosome all scaffold-N50 612111917 Primary Assembly 5 Chromosome all spanned-gaps 536 Primary Assembly 5 Chromosome all unspanned-gaps 0 Primary Assembly 5 Chromosome all gc-perc 45.5 Primary Assembly 5 Chromosome assembled-molecule total-length 612111917 Primary Assembly 5 Chromosome assembled-molecule ungapped-length 612058317 Primary Assembly 5 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 5 Chromosome assembled-molecule scaffold-N50 612111917 Primary Assembly 5 Chromosome assembled-molecule spanned-gaps 536 Primary Assembly 5 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 5 Chromosome assembled-molecule gc-perc 45.5 Primary Assembly 5 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 5 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 5 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 5 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 5 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 5 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 6 Chromosome all total-length 483802824 Primary Assembly 6 Chromosome all ungapped-length 483744424 Primary Assembly 6 Chromosome all scaffold-count 1 Primary Assembly 6 Chromosome all scaffold-N50 483802824 Primary Assembly 6 Chromosome all spanned-gaps 584 Primary Assembly 6 Chromosome all unspanned-gaps 0 Primary Assembly 6 Chromosome all gc-perc 45.5 Primary Assembly 6 Chromosome assembled-molecule total-length 483802824 Primary Assembly 6 Chromosome assembled-molecule ungapped-length 483744424 Primary Assembly 6 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 6 Chromosome assembled-molecule scaffold-N50 483802824 Primary Assembly 6 Chromosome assembled-molecule spanned-gaps 584 Primary Assembly 6 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 6 Chromosome assembled-molecule gc-perc 45.5 Primary Assembly 6 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 6 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 6 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 6 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 6 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 6 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 7 Chromosome all total-length 419331422 Primary Assembly 7 Chromosome all ungapped-length 419291422 Primary Assembly 7 Chromosome all scaffold-count 1 Primary Assembly 7 Chromosome all scaffold-N50 419331422 Primary Assembly 7 Chromosome all spanned-gaps 400 Primary Assembly 7 Chromosome all unspanned-gaps 0 Primary Assembly 7 Chromosome all gc-perc 45.5 Primary Assembly 7 Chromosome assembled-molecule total-length 419331422 Primary Assembly 7 Chromosome assembled-molecule ungapped-length 419291422 Primary Assembly 7 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 7 Chromosome assembled-molecule scaffold-N50 419331422 Primary Assembly 7 Chromosome assembled-molecule spanned-gaps 400 Primary Assembly 7 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 7 Chromosome assembled-molecule gc-perc 45.5 Primary Assembly 7 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 7 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 7 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 7 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 7 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 7 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 8 Chromosome all total-length 351206450 Primary Assembly 8 Chromosome all ungapped-length 351175950 Primary Assembly 8 Chromosome all scaffold-count 1 Primary Assembly 8 Chromosome all scaffold-N50 351206450 Primary Assembly 8 Chromosome all spanned-gaps 305 Primary Assembly 8 Chromosome all unspanned-gaps 0 Primary Assembly 8 Chromosome all gc-perc 45.5 Primary Assembly 8 Chromosome assembled-molecule total-length 351206450 Primary Assembly 8 Chromosome assembled-molecule ungapped-length 351175950 Primary Assembly 8 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 8 Chromosome assembled-molecule scaffold-N50 351206450 Primary Assembly 8 Chromosome assembled-molecule spanned-gaps 305 Primary Assembly 8 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 8 Chromosome assembled-molecule gc-perc 45.5 Primary Assembly 8 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 8 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 8 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 8 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 8 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 8 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 9 Chromosome all total-length 365511852 Primary Assembly 9 Chromosome all ungapped-length 365481152 Primary Assembly 9 Chromosome all scaffold-count 1 Primary Assembly 9 Chromosome all scaffold-N50 365511852 Primary Assembly 9 Chromosome all spanned-gaps 307 Primary Assembly 9 Chromosome all unspanned-gaps 0 Primary Assembly 9 Chromosome all gc-perc 45.5 Primary Assembly 9 Chromosome assembled-molecule total-length 365511852 Primary Assembly 9 Chromosome assembled-molecule ungapped-length 365481152 Primary Assembly 9 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 9 Chromosome assembled-molecule scaffold-N50 365511852 Primary Assembly 9 Chromosome assembled-molecule spanned-gaps 307 Primary Assembly 9 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 9 Chromosome assembled-molecule gc-perc 45.5 Primary Assembly 9 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 9 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 9 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 9 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 9 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 9 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 10 Chromosome all total-length 463535505 Primary Assembly 10 Chromosome all ungapped-length 463490005 Primary Assembly 10 Chromosome all scaffold-count 1 Primary Assembly 10 Chromosome all scaffold-N50 463535505 Primary Assembly 10 Chromosome all spanned-gaps 455 Primary Assembly 10 Chromosome all unspanned-gaps 0 Primary Assembly 10 Chromosome all gc-perc 45.5 Primary Assembly 10 Chromosome assembled-molecule total-length 463535505 Primary Assembly 10 Chromosome assembled-molecule ungapped-length 463490005 Primary Assembly 10 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 10 Chromosome assembled-molecule scaffold-N50 463535505 Primary Assembly 10 Chromosome assembled-molecule spanned-gaps 455 Primary Assembly 10 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 10 Chromosome assembled-molecule gc-perc 45.5 Primary Assembly 10 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 10 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 10 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 10 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 10 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 10 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 11 Chromosome all total-length 313896958 Primary Assembly 11 Chromosome all ungapped-length 313866458 Primary Assembly 11 Chromosome all scaffold-count 1 Primary Assembly 11 Chromosome all scaffold-N50 313896958 Primary Assembly 11 Chromosome all spanned-gaps 305 Primary Assembly 11 Chromosome all unspanned-gaps 0 Primary Assembly 11 Chromosome all gc-perc 45.5 Primary Assembly 11 Chromosome assembled-molecule total-length 313896958 Primary Assembly 11 Chromosome assembled-molecule ungapped-length 313866458 Primary Assembly 11 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 11 Chromosome assembled-molecule scaffold-N50 313896958 Primary Assembly 11 Chromosome assembled-molecule spanned-gaps 305 Primary Assembly 11 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 11 Chromosome assembled-molecule gc-perc 45.5 Primary Assembly 11 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 11 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 11 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 11 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 11 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 11 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 12 Chromosome all total-length 273001735 Primary Assembly 12 Chromosome all ungapped-length 272972735 Primary Assembly 12 Chromosome all scaffold-count 1 Primary Assembly 12 Chromosome all scaffold-N50 273001735 Primary Assembly 12 Chromosome all spanned-gaps 290 Primary Assembly 12 Chromosome all unspanned-gaps 0 Primary Assembly 12 Chromosome all gc-perc 45.5 Primary Assembly 12 Chromosome assembled-molecule total-length 273001735 Primary Assembly 12 Chromosome assembled-molecule ungapped-length 272972735 Primary Assembly 12 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 12 Chromosome assembled-molecule scaffold-N50 273001735 Primary Assembly 12 Chromosome assembled-molecule spanned-gaps 290 Primary Assembly 12 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 12 Chromosome assembled-molecule gc-perc 45.5 Primary Assembly 12 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 12 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 12 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 12 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 12 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 12 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 13 Chromosome all total-length 212178970 Primary Assembly 13 Chromosome all ungapped-length 212158270 Primary Assembly 13 Chromosome all scaffold-count 1 Primary Assembly 13 Chromosome all scaffold-N50 212178970 Primary Assembly 13 Chromosome all spanned-gaps 207 Primary Assembly 13 Chromosome all unspanned-gaps 0 Primary Assembly 13 Chromosome all gc-perc 45.5 Primary Assembly 13 Chromosome assembled-molecule total-length 212178970 Primary Assembly 13 Chromosome assembled-molecule ungapped-length 212158270 Primary Assembly 13 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 13 Chromosome assembled-molecule scaffold-N50 212178970 Primary Assembly 13 Chromosome assembled-molecule spanned-gaps 207 Primary Assembly 13 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 13 Chromosome assembled-molecule gc-perc 45.5 Primary Assembly 13 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 13 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 13 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 13 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 13 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 13 Chromosome unlocalized-scaffold unspanned-gaps 0