# Assembly Statistics Report
# Assembly name:  C_canadensis_v1
# Organism name:  Erigeron canadensis (horseweed)
# Isolate:  Cc75
# Taxid:          72917
# BioSample:      SAMN13170886
# BioProject:     PRJNA586872
# Submitter:      Agriculture and Agrifood Canada
# Date:           2020-03-09
# Assembly type:  haploid
# Release type:   major
# Assembly level: Chromosome
# Genome representation: full
# WGS project:    WJPJ01
# Assembly method: CANU v. 1.8; Proximo v. 2.0
# Expected final version: yes
# Genome coverage: 248.0x
# Sequencing technology: PacBio; Illumina; Hi-C
# RefSeq category: Representative Genome
# GenBank assembly accession: GCA_010389155.1
# RefSeq assembly accession: GCF_010389155.1
# RefSeq assembly and GenBank assemblies identical: no
# Reporting on RefSeq assembly.
#
## Assembly-Units:
## GenBank Unit Accession	RefSeq Unit Accession	Assembly-Unit name
## GCA_010389165.1	GCF_010389165.1	Primary Assembly
## GCA_010389175.1	GCF_020023375.1	non-nuclear
#
# Statistic Types
# Statistic	Description
# component-count	Number of unique components
# contig-L50	Number of contigs that are longer than, or equal to, the N50 length
# contig-N50	Contig length at which 50% of total bases in assembly are in contigs of that length or greater
# contig-count	Number of contigs
# molecule-count	Number of chromosomes and plasmids in full assembly
# region-count	Number of genomic regions defined in full assembly
# scaffold-L50	Number of scaffolds that are longer than, or equal to, the N50 length
# scaffold-N50	Scaffold length at which 50% of total bases in assembly are in scaffolds of that length or greater
# scaffold-N75	Scaffold length at which 75% of total bases in assembly are in contigs of that length or greater
# scaffold-N90	scaffold length at which 90% of total bases in assembly are in contigs of that length or greater
# scaffold-count	Number of scaffolds
# spanned-gaps	Number of spanned gaps. Spanned gaps are gaps within a scaffold
# top-level-count	Number of chromosomes or plasmids, unplaced/unlocalized scaffolds, alt-loci scaffolds, and patch scaffolds
# total-gap-length	Total length of gaps
# total-length	Total sequence length including bases and gaps
# ungapped-length	Total length excluding gaps
# unspanned-gaps	Number of unspanned gaps. Unspanned gaps are gaps between scaffolds
#
# Sequence-type Description
# all	statistic covers all the sequences in the unit-assembly and molecule(s) specified.
# molecule	statistic covers the specified molecule. molecule-name and molecule-type/loc will be given.
# unlocalized	statistic covers the sequences assigned to a molecule but with no position. molecule-name and molecule-type/loc will be given.
# unplaced	statistic covers the sequences not assigned to any molecule in the assembly.
#
# unit-name	molecule-name	molecule-type/loc	sequence-type	statistic	value
all	all	all	all	total-length	426376474
all	all	all	all	spanned-gaps	502
all	all	all	all	unspanned-gaps	0
all	all	all	all	region-count	0
all	all	all	all	scaffold-count	357
all	all	all	all	scaffold-N50	45539152
all	all	all	all	scaffold-L50	5
all	all	all	all	scaffold-N75	44637604
all	all	all	all	scaffold-N90	37882517
all	all	all	all	contig-count	859
all	all	all	all	contig-N50	1620735
all	all	all	all	contig-L50	72
all	all	all	all	total-gap-length	50200
all	all	all	all	molecule-count	10
all	all	all	all	top-level-count	357
all	all	all	all	component-count	357
Primary Assembly	all	all	all	total-length	426223753
Primary Assembly	all	all	all	ungapped-length	426173553
Primary Assembly	all	all	all	scaffold-count	356
Primary Assembly	all	all	all	scaffold-N50	45539152
Primary Assembly	all	all	all	spanned-gaps	502
Primary Assembly	all	all	all	unspanned-gaps	0
Primary Assembly	all	all	assembled-molecule	total-length	417916058
Primary Assembly	all	all	assembled-molecule	ungapped-length	417865858
Primary Assembly	all	all	assembled-molecule	scaffold-count	9
Primary Assembly	all	all	assembled-molecule	scaffold-N50	45539152
Primary Assembly	all	all	assembled-molecule	spanned-gaps	502
Primary Assembly	all	all	assembled-molecule	unspanned-gaps	0
Primary Assembly	all	all	unlocalized-scaffold	total-length	0
Primary Assembly	all	all	unlocalized-scaffold	ungapped-length	0
Primary Assembly	all	all	unlocalized-scaffold	scaffold-count	0
Primary Assembly	all	all	unlocalized-scaffold	scaffold-N50	0
Primary Assembly	all	all	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	all	all	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	na	na	unplaced-scaffold	total-length	8307695
Primary Assembly	na	na	unplaced-scaffold	ungapped-length	8307695
Primary Assembly	na	na	unplaced-scaffold	scaffold-count	347
Primary Assembly	na	na	unplaced-scaffold	scaffold-N50	24581
Primary Assembly	na	na	unplaced-scaffold	spanned-gaps	0
Primary Assembly	na	na	unplaced-scaffold	unspanned-gaps	0
Primary Assembly	1	Chromosome	all	total-length	60574678
Primary Assembly	1	Chromosome	all	ungapped-length	60568478
Primary Assembly	1	Chromosome	all	scaffold-count	1
Primary Assembly	1	Chromosome	all	scaffold-N50	60574678
Primary Assembly	1	Chromosome	all	spanned-gaps	62
Primary Assembly	1	Chromosome	all	unspanned-gaps	0
Primary Assembly	1	Chromosome	assembled-molecule	total-length	60574678
Primary Assembly	1	Chromosome	assembled-molecule	ungapped-length	60568478
Primary Assembly	1	Chromosome	assembled-molecule	scaffold-count	1
Primary Assembly	1	Chromosome	assembled-molecule	scaffold-N50	60574678
Primary Assembly	1	Chromosome	assembled-molecule	spanned-gaps	62
Primary Assembly	1	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	1	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	1	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	1	Chromosome	unlocalized-scaffold	scaffold-count	0
Primary Assembly	1	Chromosome	unlocalized-scaffold	scaffold-N50	0
Primary Assembly	1	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	1	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	2	Chromosome	all	total-length	46940054
Primary Assembly	2	Chromosome	all	ungapped-length	46934054
Primary Assembly	2	Chromosome	all	scaffold-count	1
Primary Assembly	2	Chromosome	all	scaffold-N50	46940054
Primary Assembly	2	Chromosome	all	spanned-gaps	60
Primary Assembly	2	Chromosome	all	unspanned-gaps	0
Primary Assembly	2	Chromosome	assembled-molecule	total-length	46940054
Primary Assembly	2	Chromosome	assembled-molecule	ungapped-length	46934054
Primary Assembly	2	Chromosome	assembled-molecule	scaffold-count	1
Primary Assembly	2	Chromosome	assembled-molecule	scaffold-N50	46940054
Primary Assembly	2	Chromosome	assembled-molecule	spanned-gaps	60
Primary Assembly	2	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	2	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	2	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	2	Chromosome	unlocalized-scaffold	scaffold-count	0
Primary Assembly	2	Chromosome	unlocalized-scaffold	scaffold-N50	0
Primary Assembly	2	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	2	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	3	Chromosome	all	total-length	47582799
Primary Assembly	3	Chromosome	all	ungapped-length	47576999
Primary Assembly	3	Chromosome	all	scaffold-count	1
Primary Assembly	3	Chromosome	all	scaffold-N50	47582799
Primary Assembly	3	Chromosome	all	spanned-gaps	58
Primary Assembly	3	Chromosome	all	unspanned-gaps	0
Primary Assembly	3	Chromosome	assembled-molecule	total-length	47582799
Primary Assembly	3	Chromosome	assembled-molecule	ungapped-length	47576999
Primary Assembly	3	Chromosome	assembled-molecule	scaffold-count	1
Primary Assembly	3	Chromosome	assembled-molecule	scaffold-N50	47582799
Primary Assembly	3	Chromosome	assembled-molecule	spanned-gaps	58
Primary Assembly	3	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	3	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	3	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	3	Chromosome	unlocalized-scaffold	scaffold-count	0
Primary Assembly	3	Chromosome	unlocalized-scaffold	scaffold-N50	0
Primary Assembly	3	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	3	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	4	Chromosome	all	total-length	45265620
Primary Assembly	4	Chromosome	all	ungapped-length	45260820
Primary Assembly	4	Chromosome	all	scaffold-count	1
Primary Assembly	4	Chromosome	all	scaffold-N50	45265620
Primary Assembly	4	Chromosome	all	spanned-gaps	48
Primary Assembly	4	Chromosome	all	unspanned-gaps	0
Primary Assembly	4	Chromosome	assembled-molecule	total-length	45265620
Primary Assembly	4	Chromosome	assembled-molecule	ungapped-length	45260820
Primary Assembly	4	Chromosome	assembled-molecule	scaffold-count	1
Primary Assembly	4	Chromosome	assembled-molecule	scaffold-N50	45265620
Primary Assembly	4	Chromosome	assembled-molecule	spanned-gaps	48
Primary Assembly	4	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	4	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	4	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	4	Chromosome	unlocalized-scaffold	scaffold-count	0
Primary Assembly	4	Chromosome	unlocalized-scaffold	scaffold-N50	0
Primary Assembly	4	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	4	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	5	Chromosome	all	total-length	45539152
Primary Assembly	5	Chromosome	all	ungapped-length	45532652
Primary Assembly	5	Chromosome	all	scaffold-count	1
Primary Assembly	5	Chromosome	all	scaffold-N50	45539152
Primary Assembly	5	Chromosome	all	spanned-gaps	65
Primary Assembly	5	Chromosome	all	unspanned-gaps	0
Primary Assembly	5	Chromosome	assembled-molecule	total-length	45539152
Primary Assembly	5	Chromosome	assembled-molecule	ungapped-length	45532652
Primary Assembly	5	Chromosome	assembled-molecule	scaffold-count	1
Primary Assembly	5	Chromosome	assembled-molecule	scaffold-N50	45539152
Primary Assembly	5	Chromosome	assembled-molecule	spanned-gaps	65
Primary Assembly	5	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	5	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	5	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	5	Chromosome	unlocalized-scaffold	scaffold-count	0
Primary Assembly	5	Chromosome	unlocalized-scaffold	scaffold-N50	0
Primary Assembly	5	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	5	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	6	Chromosome	all	total-length	44637604
Primary Assembly	6	Chromosome	all	ungapped-length	44630904
Primary Assembly	6	Chromosome	all	scaffold-count	1
Primary Assembly	6	Chromosome	all	scaffold-N50	44637604
Primary Assembly	6	Chromosome	all	spanned-gaps	67
Primary Assembly	6	Chromosome	all	unspanned-gaps	0
Primary Assembly	6	Chromosome	assembled-molecule	total-length	44637604
Primary Assembly	6	Chromosome	assembled-molecule	ungapped-length	44630904
Primary Assembly	6	Chromosome	assembled-molecule	scaffold-count	1
Primary Assembly	6	Chromosome	assembled-molecule	scaffold-N50	44637604
Primary Assembly	6	Chromosome	assembled-molecule	spanned-gaps	67
Primary Assembly	6	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	6	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	6	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	6	Chromosome	unlocalized-scaffold	scaffold-count	0
Primary Assembly	6	Chromosome	unlocalized-scaffold	scaffold-N50	0
Primary Assembly	6	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	6	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	7	Chromosome	all	total-length	39352857
Primary Assembly	7	Chromosome	all	ungapped-length	39347857
Primary Assembly	7	Chromosome	all	scaffold-count	1
Primary Assembly	7	Chromosome	all	scaffold-N50	39352857
Primary Assembly	7	Chromosome	all	spanned-gaps	50
Primary Assembly	7	Chromosome	all	unspanned-gaps	0
Primary Assembly	7	Chromosome	assembled-molecule	total-length	39352857
Primary Assembly	7	Chromosome	assembled-molecule	ungapped-length	39347857
Primary Assembly	7	Chromosome	assembled-molecule	scaffold-count	1
Primary Assembly	7	Chromosome	assembled-molecule	scaffold-N50	39352857
Primary Assembly	7	Chromosome	assembled-molecule	spanned-gaps	50
Primary Assembly	7	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	7	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	7	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	7	Chromosome	unlocalized-scaffold	scaffold-count	0
Primary Assembly	7	Chromosome	unlocalized-scaffold	scaffold-N50	0
Primary Assembly	7	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	7	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	8	Chromosome	all	total-length	50140777
Primary Assembly	8	Chromosome	all	ungapped-length	50135977
Primary Assembly	8	Chromosome	all	scaffold-count	1
Primary Assembly	8	Chromosome	all	scaffold-N50	50140777
Primary Assembly	8	Chromosome	all	spanned-gaps	48
Primary Assembly	8	Chromosome	all	unspanned-gaps	0
Primary Assembly	8	Chromosome	assembled-molecule	total-length	50140777
Primary Assembly	8	Chromosome	assembled-molecule	ungapped-length	50135977
Primary Assembly	8	Chromosome	assembled-molecule	scaffold-count	1
Primary Assembly	8	Chromosome	assembled-molecule	scaffold-N50	50140777
Primary Assembly	8	Chromosome	assembled-molecule	spanned-gaps	48
Primary Assembly	8	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	8	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	8	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	8	Chromosome	unlocalized-scaffold	scaffold-count	0
Primary Assembly	8	Chromosome	unlocalized-scaffold	scaffold-N50	0
Primary Assembly	8	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	8	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	9	Chromosome	all	total-length	37882517
Primary Assembly	9	Chromosome	all	ungapped-length	37878117
Primary Assembly	9	Chromosome	all	scaffold-count	1
Primary Assembly	9	Chromosome	all	scaffold-N50	37882517
Primary Assembly	9	Chromosome	all	spanned-gaps	44
Primary Assembly	9	Chromosome	all	unspanned-gaps	0
Primary Assembly	9	Chromosome	assembled-molecule	total-length	37882517
Primary Assembly	9	Chromosome	assembled-molecule	ungapped-length	37878117
Primary Assembly	9	Chromosome	assembled-molecule	scaffold-count	1
Primary Assembly	9	Chromosome	assembled-molecule	scaffold-N50	37882517
Primary Assembly	9	Chromosome	assembled-molecule	spanned-gaps	44
Primary Assembly	9	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	9	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	9	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	9	Chromosome	unlocalized-scaffold	scaffold-count	0
Primary Assembly	9	Chromosome	unlocalized-scaffold	scaffold-N50	0
Primary Assembly	9	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	9	Chromosome	unlocalized-scaffold	unspanned-gaps	0
non-nuclear	all	all	all	total-length	152721
non-nuclear	all	all	all	ungapped-length	152721
non-nuclear	all	all	all	scaffold-count	1
non-nuclear	all	all	all	scaffold-N50	152721
non-nuclear	all	all	all	spanned-gaps	0
non-nuclear	all	all	all	unspanned-gaps	0
non-nuclear	all	all	assembled-molecule	total-length	152721
non-nuclear	all	all	assembled-molecule	ungapped-length	152721
non-nuclear	all	all	assembled-molecule	scaffold-count	1
non-nuclear	all	all	assembled-molecule	scaffold-N50	152721
non-nuclear	all	all	assembled-molecule	spanned-gaps	0
non-nuclear	all	all	assembled-molecule	unspanned-gaps	0
non-nuclear	all	all	unlocalized-scaffold	total-length	0
non-nuclear	all	all	unlocalized-scaffold	ungapped-length	0
non-nuclear	all	all	unlocalized-scaffold	scaffold-count	0
non-nuclear	all	all	unlocalized-scaffold	scaffold-N50	0
non-nuclear	all	all	unlocalized-scaffold	spanned-gaps	0
non-nuclear	all	all	unlocalized-scaffold	unspanned-gaps	0
non-nuclear	Pltd	Chloroplast	all	total-length	152721
non-nuclear	Pltd	Chloroplast	all	ungapped-length	152721
non-nuclear	Pltd	Chloroplast	all	scaffold-count	1
non-nuclear	Pltd	Chloroplast	all	scaffold-N50	152721
non-nuclear	Pltd	Chloroplast	all	spanned-gaps	0
non-nuclear	Pltd	Chloroplast	all	unspanned-gaps	0
non-nuclear	Pltd	Chloroplast	assembled-molecule	total-length	152721
non-nuclear	Pltd	Chloroplast	assembled-molecule	ungapped-length	152721
non-nuclear	Pltd	Chloroplast	assembled-molecule	scaffold-count	1
non-nuclear	Pltd	Chloroplast	assembled-molecule	scaffold-N50	152721
non-nuclear	Pltd	Chloroplast	assembled-molecule	spanned-gaps	0
non-nuclear	Pltd	Chloroplast	assembled-molecule	unspanned-gaps	0
non-nuclear	Pltd	Chloroplast	unlocalized-scaffold	total-length	0
non-nuclear	Pltd	Chloroplast	unlocalized-scaffold	ungapped-length	0
non-nuclear	Pltd	Chloroplast	unlocalized-scaffold	scaffold-count	0
non-nuclear	Pltd	Chloroplast	unlocalized-scaffold	scaffold-N50	0
non-nuclear	Pltd	Chloroplast	unlocalized-scaffold	spanned-gaps	0
non-nuclear	Pltd	Chloroplast	unlocalized-scaffold	unspanned-gaps	0