# Assembly Statistics Report # Assembly name: Rspec1.0 # Organism name: Ruellia speciosa (eudicots) # Isolate: Rspec5 # Taxid: 441023 # BioSample: SAMN05185177 # BioProject: PRJNA326965 # Submitter: University of Colorado-Boulder # Date: 2016-12-20 # Assembly type: haploid # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: MAYD01 # Assembly method: MaSuRCA v. 3.1.0 # Expected final version: yes # Genome coverage: 108.0x # Sequencing technology: Illumina HiSeq # RefSeq category: Representative Genome # GenBank assembly accession: GCA_001909325.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_001909335.1 Primary Assembly # # Statistic Types # Statistic Description # component-count Number of unique components # contig-L50 Number of contigs that are longer than, or equal to, the N50 length # contig-N50 Contig length at which 50% of total bases in assembly are in contigs of that length or greater # contig-count Number of contigs # gc-perc gc-count/atgc-count as percentage # molecule-count Number of chromosomes and plasmids in full assembly # region-count Number of genomic regions defined in full assembly # spanned-gaps Number of spanned gaps. Spanned gaps are gaps within a scaffold # top-level-count Number of chromosomes or plasmids, unplaced/unlocalized scaffolds, alt-loci scaffolds, and patch scaffolds # total-gap-length Total length of gaps # total-length Total sequence length including bases and gaps # ungapped-length Total length excluding gaps # unspanned-gaps Number of unspanned gaps. Unspanned gaps are gaps between scaffolds # # Sequence-type Description # all statistic covers all the sequences in the unit-assembly and molecule(s) specified. # molecule statistic covers the specified molecule. molecule-name and molecule-type/loc will be given. # unlocalized statistic covers the sequences assigned to a molecule but with no position. molecule-name and molecule-type/loc will be given. # unplaced statistic covers the sequences not assigned to any molecule in the assembly. # # unit-name molecule-name molecule-type/loc sequence-type statistic value all all all all total-length 740035655 all all all all spanned-gaps 0 all all all all unspanned-gaps 0 all all all all region-count 0 all all all all contig-count 794288 all all all all contig-N50 1201 all all all all contig-L50 139522 all all all all total-gap-length 0 all all all all molecule-count 0 all all all all top-level-count 794288 all all all all component-count 794288 all all all all gc-perc 39 Primary Assembly all all all total-length 740035655 Primary Assembly all all all ungapped-length 740035655 Primary Assembly all all all spanned-gaps 0 Primary Assembly all all all unspanned-gaps 0 Primary Assembly all all all gc-perc 39 Primary Assembly all all assembled-molecule total-length 0 Primary Assembly all all assembled-molecule ungapped-length 0 Primary Assembly all all assembled-molecule spanned-gaps 0 Primary Assembly all all assembled-molecule unspanned-gaps 0 Primary Assembly all all unlocalized-scaffold total-length 0 Primary Assembly all all unlocalized-scaffold ungapped-length 0 Primary Assembly all all unlocalized-scaffold spanned-gaps 0 Primary Assembly all all unlocalized-scaffold unspanned-gaps 0 Primary Assembly na na unplaced-scaffold total-length 740035655 Primary Assembly na na unplaced-scaffold ungapped-length 740035655 Primary Assembly na na unplaced-scaffold spanned-gaps 0 Primary Assembly na na unplaced-scaffold unspanned-gaps 0 Primary Assembly na na unplaced-scaffold gc-perc 39