# Assembly name: ASM2865129v1 # Organism name: Catharanthus roseus (Madagascar periwinkle) # Infraspecific name: cultivar=Sunstorm Apricot # Isolate: FGT_2020_1 # Taxid: 4058 # BioSample: SAMN31953452 # BioProject: PRJNA907167 # Submitter: Tours University # Date: 2023-02-14 # Assembly type: haploid # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JAPQWS01 # Assembly method: Flye v. 2.5 # Expected final version: yes # Genome coverage: 60.0x # Sequencing technology: Illumina HiSeq; Oxford Nanopore PromethION # RefSeq category: Representative Genome # GenBank assembly accession: GCA_028651295.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_028651305.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig_490 unplaced-scaffold na na JAPQWS010000001.1 <> na Primary Assembly 3304125 na contig_270 unplaced-scaffold na na JAPQWS010000002.1 <> na Primary Assembly 244989 na contig_678 unplaced-scaffold na na JAPQWS010000003.1 <> na Primary Assembly 409505 na contig_853 unplaced-scaffold na na JAPQWS010000004.1 <> na Primary Assembly 16308887 na contig_27 unplaced-scaffold na na JAPQWS010000005.1 <> na Primary Assembly 603513 na contig_237 unplaced-scaffold na na JAPQWS010000006.1 <> na Primary Assembly 508636 na contig_514 unplaced-scaffold na na JAPQWS010000007.1 <> na Primary Assembly 8729147 na contig_491 unplaced-scaffold na na JAPQWS010000008.1 <> na Primary Assembly 114172 na contig_450 unplaced-scaffold na na JAPQWS010000009.1 <> na Primary Assembly 94480 na contig_182 unplaced-scaffold na na JAPQWS010000010.1 <> na Primary Assembly 65275 na contig_316 unplaced-scaffold na na JAPQWS010000011.1 <> na Primary Assembly 57129 na contig_527 unplaced-scaffold na na JAPQWS010000012.1 <> na Primary Assembly 280744 na contig_210 unplaced-scaffold na na JAPQWS010000013.1 <> na Primary Assembly 220948 na contig_440 unplaced-scaffold na na JAPQWS010000014.1 <> na Primary Assembly 483696 na contig_291 unplaced-scaffold na na JAPQWS010000015.1 <> na Primary Assembly 58840 na contig_472 unplaced-scaffold na na JAPQWS010000016.1 <> na Primary Assembly 26295431 na contig_4 unplaced-scaffold na na JAPQWS010000017.1 <> na Primary Assembly 68243 na contig_739 unplaced-scaffold na na JAPQWS010000018.1 <> na Primary Assembly 282308 na contig_538 unplaced-scaffold na na JAPQWS010000019.1 <> na Primary Assembly 205037 na contig_29 unplaced-scaffold na na JAPQWS010000020.1 <> na Primary Assembly 252690 na contig_411 unplaced-scaffold na na JAPQWS010000021.1 <> na Primary Assembly 117150 na contig_564 unplaced-scaffold na na JAPQWS010000022.1 <> na Primary Assembly 332471 na contig_665 unplaced-scaffold na na JAPQWS010000023.1 <> na Primary Assembly 474723 na contig_157 unplaced-scaffold na na JAPQWS010000024.1 <> na Primary Assembly 230559 na contig_843 unplaced-scaffold na na JAPQWS010000025.1 <> na Primary Assembly 233869 na contig_666 unplaced-scaffold na na JAPQWS010000026.1 <> na Primary Assembly 2217228 na contig_515 unplaced-scaffold na na JAPQWS010000027.1 <> na Primary Assembly 2223819 na contig_432 unplaced-scaffold na na JAPQWS010000028.1 <> na Primary Assembly 2369758 na contig_96 unplaced-scaffold na na JAPQWS010000029.1 <> na Primary Assembly 156434 na contig_312 unplaced-scaffold na na JAPQWS010000030.1 <> na Primary Assembly 160458 na contig_568 unplaced-scaffold na na JAPQWS010000031.1 <> na Primary Assembly 36635 na contig_249 unplaced-scaffold na na JAPQWS010000032.1 <> na Primary Assembly 3315951 na contig_117 unplaced-scaffold na na JAPQWS010000033.1 <> na Primary Assembly 17236882 na contig_885 unplaced-scaffold na na JAPQWS010000034.1 <> na Primary Assembly 1643242 na contig_713 unplaced-scaffold na na JAPQWS010000035.1 <> na Primary Assembly 712611 na contig_98 unplaced-scaffold na na JAPQWS010000036.1 <> na Primary Assembly 559795 na contig_442 unplaced-scaffold na na JAPQWS010000037.1 <> na Primary Assembly 603040 na contig_840 unplaced-scaffold na na JAPQWS010000038.1 <> na Primary Assembly 5471342 na contig_296 unplaced-scaffold na na JAPQWS010000039.1 <> na Primary Assembly 9196182 na contig_423 unplaced-scaffold na na JAPQWS010000040.1 <> na Primary Assembly 174652 na contig_844 unplaced-scaffold na na JAPQWS010000041.1 <> na Primary Assembly 69888 na contig_281 unplaced-scaffold na na JAPQWS010000042.1 <> na Primary Assembly 9587005 na contig_848 unplaced-scaffold na na JAPQWS010000043.1 <> na Primary Assembly 32189 na contig_30 unplaced-scaffold na na JAPQWS010000044.1 <> na Primary Assembly 5775887 na contig_208 unplaced-scaffold na na JAPQWS010000045.1 <> na Primary Assembly 2448731 na contig_36 unplaced-scaffold na na JAPQWS010000046.1 <> na Primary Assembly 11940015 na contig_344 unplaced-scaffold na na JAPQWS010000047.1 <> na Primary Assembly 5164611 na contig_642 unplaced-scaffold na na JAPQWS010000048.1 <> na Primary Assembly 4495459 na contig_600 unplaced-scaffold na na JAPQWS010000049.1 <> na Primary Assembly 92383 na contig_53 unplaced-scaffold na na JAPQWS010000050.1 <> na Primary Assembly 24530441 na contig_580 unplaced-scaffold na na JAPQWS010000051.1 <> na Primary Assembly 2368103 na contig_269 unplaced-scaffold na na JAPQWS010000052.1 <> na Primary Assembly 159034 na contig_166 unplaced-scaffold na na JAPQWS010000053.1 <> na Primary Assembly 532823 na contig_494 unplaced-scaffold na na JAPQWS010000054.1 <> na Primary Assembly 18048635 na contig_839 unplaced-scaffold na na JAPQWS010000055.1 <> na Primary Assembly 270257 na contig_456 unplaced-scaffold na na JAPQWS010000056.1 <> na Primary Assembly 52546 na contig_884 unplaced-scaffold na na JAPQWS010000057.1 <> na Primary Assembly 7183303 na contig_162 unplaced-scaffold na na JAPQWS010000058.1 <> na Primary Assembly 400146 na contig_373 unplaced-scaffold na na JAPQWS010000059.1 <> na Primary Assembly 62538 na contig_26 unplaced-scaffold na na JAPQWS010000060.1 <> na Primary Assembly 427698 na contig_586 unplaced-scaffold na na JAPQWS010000061.1 <> na Primary Assembly 743174 na contig_332 unplaced-scaffold na na JAPQWS010000062.1 <> na Primary Assembly 110058 na scaffold_543 unplaced-scaffold na na JAPQWS010000063.1 <> na Primary Assembly 311510 na contig_75 unplaced-scaffold na na JAPQWS010000064.1 <> na Primary Assembly 47873 na contig_554 unplaced-scaffold na na JAPQWS010000065.1 <> na Primary Assembly 188015 na contig_176 unplaced-scaffold na na JAPQWS010000066.1 <> na Primary Assembly 323406 na contig_676 unplaced-scaffold na na JAPQWS010000067.1 <> na Primary Assembly 64593 na contig_507 unplaced-scaffold na na JAPQWS010000068.1 <> na Primary Assembly 287873 na scaffold_789 unplaced-scaffold na na JAPQWS010000069.1 <> na Primary Assembly 3806466 na contig_136 unplaced-scaffold na na JAPQWS010000070.1 <> na Primary Assembly 2822883 na contig_119 unplaced-scaffold na na JAPQWS010000071.1 <> na Primary Assembly 223694 na contig_634 unplaced-scaffold na na JAPQWS010000072.1 <> na Primary Assembly 379850 na contig_314 unplaced-scaffold na na JAPQWS010000073.1 <> na Primary Assembly 222415 na contig_392 unplaced-scaffold na na JAPQWS010000074.1 <> na Primary Assembly 5406977 na contig_626 unplaced-scaffold na na JAPQWS010000075.1 <> na Primary Assembly 1828580 na contig_289 unplaced-scaffold na na JAPQWS010000076.1 <> na Primary Assembly 14994886 na contig_615 unplaced-scaffold na na JAPQWS010000077.1 <> na Primary Assembly 117253 na contig_5 unplaced-scaffold na na JAPQWS010000078.1 <> na Primary Assembly 7747038 na contig_79 unplaced-scaffold na na JAPQWS010000079.1 <> na Primary Assembly 339807 na contig_764 unplaced-scaffold na na JAPQWS010000080.1 <> na Primary Assembly 293208 na contig_695 unplaced-scaffold na na JAPQWS010000081.1 <> na Primary Assembly 26080 na contig_260 unplaced-scaffold na na JAPQWS010000082.1 <> na Primary Assembly 607227 na contig_164 unplaced-scaffold na na JAPQWS010000083.1 <> na Primary Assembly 7468801 na contig_97 unplaced-scaffold na na JAPQWS010000084.1 <> na Primary Assembly 111294 na contig_45 unplaced-scaffold na na JAPQWS010000085.1 <> na Primary Assembly 437145 na contig_351 unplaced-scaffold na na JAPQWS010000086.1 <> na Primary Assembly 7290418 na contig_449 unplaced-scaffold na na JAPQWS010000087.1 <> na Primary Assembly 8997016 na contig_47 unplaced-scaffold na na JAPQWS010000088.1 <> na Primary Assembly 350174 na contig_178 unplaced-scaffold na na JAPQWS010000089.1 <> na Primary Assembly 517109 na contig_544 unplaced-scaffold na na JAPQWS010000090.1 <> na Primary Assembly 238956 na contig_565 unplaced-scaffold na na JAPQWS010000091.1 <> na Primary Assembly 4525895 na contig_72 unplaced-scaffold na na JAPQWS010000092.1 <> na Primary Assembly 245997 na contig_209 unplaced-scaffold na na JAPQWS010000093.1 <> na Primary Assembly 12241076 na contig_837 unplaced-scaffold na na JAPQWS010000094.1 <> na Primary Assembly 110905 na contig_116 unplaced-scaffold na na JAPQWS010000095.1 <> na Primary Assembly 6471862 na contig_653 unplaced-scaffold na na JAPQWS010000096.1 <> na Primary Assembly 176799 na contig_123 unplaced-scaffold na na JAPQWS010000097.1 <> na Primary Assembly 1756955 na contig_852 unplaced-scaffold na na JAPQWS010000098.1 <> na Primary Assembly 5018372 na contig_309 unplaced-scaffold na na JAPQWS010000099.1 <> na Primary Assembly 215783 na contig_371 unplaced-scaffold na na JAPQWS010000100.1 <> na Primary Assembly 411935 na contig_276 unplaced-scaffold na na JAPQWS010000101.1 <> na Primary Assembly 161202 na contig_658 unplaced-scaffold na na JAPQWS010000102.1 <> na Primary Assembly 16040438 na contig_631 unplaced-scaffold na na JAPQWS010000103.1 <> na Primary Assembly 539511 na contig_800 unplaced-scaffold na na JAPQWS010000104.1 <> na Primary Assembly 21761902 na contig_32 unplaced-scaffold na na JAPQWS010000105.1 <> na Primary Assembly 552970 na contig_641 unplaced-scaffold na na JAPQWS010000106.1 <> na Primary Assembly 317372 na contig_886 unplaced-scaffold na na JAPQWS010000107.1 <> na Primary Assembly 4499205 na contig_738 unplaced-scaffold na na JAPQWS010000108.1 <> na Primary Assembly 3947653 na contig_876 unplaced-scaffold na na JAPQWS010000109.1 <> na Primary Assembly 5091136 na contig_855 unplaced-scaffold na na JAPQWS010000110.1 <> na Primary Assembly 1723553 na contig_476 unplaced-scaffold na na JAPQWS010000111.1 <> na Primary Assembly 2398843 na contig_806 unplaced-scaffold na na JAPQWS010000112.1 <> na Primary Assembly 142469 na contig_391 unplaced-scaffold na na JAPQWS010000113.1 <> na Primary Assembly 651389 na contig_167 unplaced-scaffold na na JAPQWS010000114.1 <> na Primary Assembly 255666 na contig_299 unplaced-scaffold na na JAPQWS010000115.1 <> na Primary Assembly 136941 na contig_401 unplaced-scaffold na na JAPQWS010000116.1 <> na Primary Assembly 11036106 na contig_381 unplaced-scaffold na na JAPQWS010000117.1 <> na Primary Assembly 146442 na contig_581 unplaced-scaffold na na JAPQWS010000118.1 <> na Primary Assembly 248502 na contig_730 unplaced-scaffold na na JAPQWS010000119.1 <> na Primary Assembly 545809 na contig_663 unplaced-scaffold na na JAPQWS010000120.1 <> na Primary Assembly 8208469 na contig_822 unplaced-scaffold na na JAPQWS010000121.1 <> na Primary Assembly 499750 na contig_811 unplaced-scaffold na na JAPQWS010000122.1 <> na Primary Assembly 158507 na contig_469 unplaced-scaffold na na JAPQWS010000123.1 <> na Primary Assembly 1025373 na contig_484 unplaced-scaffold na na JAPQWS010000124.1 <> na Primary Assembly 8477183 na contig_616 unplaced-scaffold na na JAPQWS010000125.1 <> na Primary Assembly 533383 na contig_65 unplaced-scaffold na na JAPQWS010000126.1 <> na Primary Assembly 154506 na contig_831 unplaced-scaffold na na JAPQWS010000127.1 <> na Primary Assembly 388344 na contig_540 unplaced-scaffold na na JAPQWS010000128.1 <> na Primary Assembly 6105949 na contig_479 unplaced-scaffold na na JAPQWS010000129.1 <> na Primary Assembly 149874 na contig_60 unplaced-scaffold na na JAPQWS010000130.1 <> na Primary Assembly 1008689 na contig_345 unplaced-scaffold na na JAPQWS010000131.1 <> na Primary Assembly 2696248 na contig_870 unplaced-scaffold na na JAPQWS010000132.1 <> na Primary Assembly 1454584 na contig_64 unplaced-scaffold na na JAPQWS010000133.1 <> na Primary Assembly 249713 na contig_847 unplaced-scaffold na na JAPQWS010000134.1 <> na Primary Assembly 218349 na contig_69 unplaced-scaffold na na JAPQWS010000135.1 <> na Primary Assembly 838576 na contig_727 unplaced-scaffold na na JAPQWS010000136.1 <> na Primary Assembly 137680 na contig_357 unplaced-scaffold na na JAPQWS010000137.1 <> na Primary Assembly 16088804 na contig_878 unplaced-scaffold na na JAPQWS010000138.1 <> na Primary Assembly 106953 na contig_379 unplaced-scaffold na na JAPQWS010000139.1 <> na Primary Assembly 2571918 na contig_797 unplaced-scaffold na na JAPQWS010000140.1 <> na Primary Assembly 4660765 na contig_612 unplaced-scaffold na na JAPQWS010000141.1 <> na Primary Assembly 692932 na contig_618 unplaced-scaffold na na JAPQWS010000142.1 <> na Primary Assembly 4981331 na contig_795 unplaced-scaffold na na JAPQWS010000143.1 <> na Primary Assembly 238642 na contig_243 unplaced-scaffold na na JAPQWS010000144.1 <> na Primary Assembly 679688 na contig_346 unplaced-scaffold na na JAPQWS010000145.1 <> na Primary Assembly 976323 na contig_146 unplaced-scaffold na na JAPQWS010000146.1 <> na Primary Assembly 4345334 na contig_298 unplaced-scaffold na na JAPQWS010000147.1 <> na Primary Assembly 5667958 na contig_239 unplaced-scaffold na na JAPQWS010000148.1 <> na Primary Assembly 10215225 na contig_624 unplaced-scaffold na na JAPQWS010000149.1 <> na Primary Assembly 453108 na contig_856 unplaced-scaffold na na JAPQWS010000150.1 <> na Primary Assembly 377040 na contig_385 unplaced-scaffold na na JAPQWS010000151.1 <> na Primary Assembly 304116 na contig_862 unplaced-scaffold na na JAPQWS010000152.1 <> na Primary Assembly 549667 na contig_627 unplaced-scaffold na na JAPQWS010000153.1 <> na Primary Assembly 29473892 na contig_497 unplaced-scaffold na na JAPQWS010000154.1 <> na Primary Assembly 922111 na contig_610 unplaced-scaffold na na JAPQWS010000155.1 <> na Primary Assembly 99252 na contig_857 unplaced-scaffold na na JAPQWS010000156.1 <> na Primary Assembly 111924 na contig_161 unplaced-scaffold na na JAPQWS010000157.1 <> na Primary Assembly 1051704 na contig_836 unplaced-scaffold na na JAPQWS010000158.1 <> na Primary Assembly 788046 na contig_363 unplaced-scaffold na na JAPQWS010000159.1 <> na Primary Assembly 45324832 na contig_776 unplaced-scaffold na na JAPQWS010000160.1 <> na Primary Assembly 314467 na contig_374 unplaced-scaffold na na JAPQWS010000161.1 <> na Primary Assembly 3346629 na contig_141 unplaced-scaffold na na JAPQWS010000162.1 <> na Primary Assembly 48487 na contig_685 unplaced-scaffold na na JAPQWS010000163.1 <> na Primary Assembly 4123912 na contig_93 unplaced-scaffold na na JAPQWS010000164.1 <> na Primary Assembly 288189 na contig_105 unplaced-scaffold na na JAPQWS010000165.1 <> na Primary Assembly 5676999 na contig_354 unplaced-scaffold na na JAPQWS010000166.1 <> na Primary Assembly 370042 na contig_732 unplaced-scaffold na na JAPQWS010000167.1 <> na Primary Assembly 1838529 na contig_42 unplaced-scaffold na na JAPQWS010000168.1 <> na Primary Assembly 32589393 na contig_688 unplaced-scaffold na na JAPQWS010000169.1 <> na Primary Assembly 166304 na contig_888 unplaced-scaffold na na JAPQWS010000170.1 <> na Primary Assembly 1159535 na contig_496 unplaced-scaffold na na JAPQWS010000171.1 <> na Primary Assembly 234558 na contig_649 unplaced-scaffold na na JAPQWS010000172.1 <> na Primary Assembly 331342 na contig_792 unplaced-scaffold na na JAPQWS010000173.1 <> na Primary Assembly 606111 na