# Assembly Statistics Report # Assembly name: ASM1485142v1 # Organism name: Senna tora (eudicots) # Infraspecific name: cultivar=Myeongyun # Taxid: 362788 # BioSample: SAMN14013601 # BioProject: PRJNA605066 # Submitter: National Institute of Agricultural Sciences # Date: 2020-10-07 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAAIUW01 # Assembly method: FALCON-Unzip v. June-2018 # Expected final version: yes # Genome coverage: 146.0x # Sequencing technology: PacBio RSII; PacBio Sequel # RefSeq category: Representative Genome # GenBank assembly accession: GCA_014851425.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_014851445.1 Primary Assembly # # Statistic Types # Statistic Description # component-count Number of unique components # contig-L50 Number of contigs that are longer than, or equal to, the N50 length # contig-N50 Contig length at which 50% of total bases in assembly are in contigs of that length or greater # contig-count Number of contigs # molecule-count Number of chromosomes and plasmids in full assembly # region-count Number of genomic regions defined in full assembly # scaffold-L50 Number of scaffolds that are longer than, or equal to, the N50 length # scaffold-N50 Scaffold length at which 50% of total bases in assembly are in scaffolds of that length or greater # scaffold-N75 Scaffold length at which 75% of total bases in assembly are in contigs of that length or greater # scaffold-N90 scaffold length at which 90% of total bases in assembly are in contigs of that length or greater # scaffold-count Number of scaffolds # spanned-gaps Number of spanned gaps. Spanned gaps are gaps within a scaffold # top-level-count Number of chromosomes or plasmids, unplaced/unlocalized scaffolds, alt-loci scaffolds, and patch scaffolds # total-gap-length Total length of gaps # total-length Total sequence length including bases and gaps # ungapped-length Total length excluding gaps # unspanned-gaps Number of unspanned gaps. Unspanned gaps are gaps between scaffolds # # Sequence-type Description # all statistic covers all the sequences in the unit-assembly and molecule(s) specified. # molecule statistic covers the specified molecule. molecule-name and molecule-type/loc will be given. # unlocalized statistic covers the sequences assigned to a molecule but with no position. molecule-name and molecule-type/loc will be given. # unplaced statistic covers the sequences not assigned to any molecule in the assembly. # # unit-name molecule-name molecule-type/loc sequence-type statistic value all all all all total-length 526356977 all all all all spanned-gaps 294 all all all all unspanned-gaps 0 all all all all region-count 0 all all all all scaffold-count 444 all all all all scaffold-N50 41270226 all all all all scaffold-L50 6 all all all all scaffold-N75 30975534 all all all all scaffold-N90 29799933 all all all all contig-count 738 all all all all contig-N50 3966958 all all all all contig-L50 38 all all all all total-gap-length 29400 all all all all molecule-count 13 all all all all top-level-count 444 all all all all component-count 444 Primary Assembly all all all total-length 526356977 Primary Assembly all all all ungapped-length 526327577 Primary Assembly all all all scaffold-count 444 Primary Assembly all all all scaffold-N50 41270226 Primary Assembly all all all spanned-gaps 294 Primary Assembly all all all unspanned-gaps 0 Primary Assembly all all assembled-molecule total-length 502647244 Primary Assembly all all assembled-molecule ungapped-length 502619644 Primary Assembly all all assembled-molecule scaffold-count 13 Primary Assembly all all assembled-molecule scaffold-N50 41270226 Primary Assembly all all assembled-molecule spanned-gaps 276 Primary Assembly all all assembled-molecule unspanned-gaps 0 Primary Assembly all all unlocalized-scaffold total-length 0 Primary Assembly all all unlocalized-scaffold ungapped-length 0 Primary Assembly all all unlocalized-scaffold scaffold-count 0 Primary Assembly all all unlocalized-scaffold scaffold-N50 0 Primary Assembly all all unlocalized-scaffold spanned-gaps 0 Primary Assembly all all unlocalized-scaffold unspanned-gaps 0 Primary Assembly na na unplaced-scaffold total-length 23709733 Primary Assembly na na unplaced-scaffold ungapped-length 23707933 Primary Assembly na na unplaced-scaffold scaffold-count 431 Primary Assembly na na unplaced-scaffold scaffold-N50 69624 Primary Assembly na na unplaced-scaffold spanned-gaps 18 Primary Assembly na na unplaced-scaffold unspanned-gaps 0 Primary Assembly 1 Chromosome all total-length 32816166 Primary Assembly 1 Chromosome all ungapped-length 32814166 Primary Assembly 1 Chromosome all scaffold-count 1 Primary Assembly 1 Chromosome all scaffold-N50 32816166 Primary Assembly 1 Chromosome all spanned-gaps 20 Primary Assembly 1 Chromosome all unspanned-gaps 0 Primary Assembly 1 Chromosome assembled-molecule total-length 32816166 Primary Assembly 1 Chromosome assembled-molecule ungapped-length 32814166 Primary Assembly 1 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 1 Chromosome assembled-molecule scaffold-N50 32816166 Primary Assembly 1 Chromosome assembled-molecule spanned-gaps 20 Primary Assembly 1 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 1 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 1 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 1 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 1 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 1 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 1 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 2 Chromosome all total-length 42009719 Primary Assembly 2 Chromosome all ungapped-length 42006319 Primary Assembly 2 Chromosome all scaffold-count 1 Primary Assembly 2 Chromosome all scaffold-N50 42009719 Primary Assembly 2 Chromosome all spanned-gaps 34 Primary Assembly 2 Chromosome all unspanned-gaps 0 Primary Assembly 2 Chromosome assembled-molecule total-length 42009719 Primary Assembly 2 Chromosome assembled-molecule ungapped-length 42006319 Primary Assembly 2 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 2 Chromosome assembled-molecule scaffold-N50 42009719 Primary Assembly 2 Chromosome assembled-molecule spanned-gaps 34 Primary Assembly 2 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 2 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 2 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 2 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 2 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 2 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 2 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 3 Chromosome all total-length 37860065 Primary Assembly 3 Chromosome all ungapped-length 37858465 Primary Assembly 3 Chromosome all scaffold-count 1 Primary Assembly 3 Chromosome all scaffold-N50 37860065 Primary Assembly 3 Chromosome all spanned-gaps 16 Primary Assembly 3 Chromosome all unspanned-gaps 0 Primary Assembly 3 Chromosome assembled-molecule total-length 37860065 Primary Assembly 3 Chromosome assembled-molecule ungapped-length 37858465 Primary Assembly 3 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 3 Chromosome assembled-molecule scaffold-N50 37860065 Primary Assembly 3 Chromosome assembled-molecule spanned-gaps 16 Primary Assembly 3 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 3 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 3 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 3 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 3 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 3 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 3 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 4 Chromosome all total-length 30689712 Primary Assembly 4 Chromosome all ungapped-length 30685912 Primary Assembly 4 Chromosome all scaffold-count 1 Primary Assembly 4 Chromosome all scaffold-N50 30689712 Primary Assembly 4 Chromosome all spanned-gaps 38 Primary Assembly 4 Chromosome all unspanned-gaps 0 Primary Assembly 4 Chromosome assembled-molecule total-length 30689712 Primary Assembly 4 Chromosome assembled-molecule ungapped-length 30685912 Primary Assembly 4 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 4 Chromosome assembled-molecule scaffold-N50 30689712 Primary Assembly 4 Chromosome assembled-molecule spanned-gaps 38 Primary Assembly 4 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 4 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 4 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 4 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 4 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 4 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 4 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 5 Chromosome all total-length 52777034 Primary Assembly 5 Chromosome all ungapped-length 52774534 Primary Assembly 5 Chromosome all scaffold-count 1 Primary Assembly 5 Chromosome all scaffold-N50 52777034 Primary Assembly 5 Chromosome all spanned-gaps 25 Primary Assembly 5 Chromosome all unspanned-gaps 0 Primary Assembly 5 Chromosome assembled-molecule total-length 52777034 Primary Assembly 5 Chromosome assembled-molecule ungapped-length 52774534 Primary Assembly 5 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 5 Chromosome assembled-molecule scaffold-N50 52777034 Primary Assembly 5 Chromosome assembled-molecule spanned-gaps 25 Primary Assembly 5 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 5 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 5 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 5 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 5 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 5 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 5 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 6 Chromosome all total-length 46512068 Primary Assembly 6 Chromosome all ungapped-length 46510868 Primary Assembly 6 Chromosome all scaffold-count 1 Primary Assembly 6 Chromosome all scaffold-N50 46512068 Primary Assembly 6 Chromosome all spanned-gaps 12 Primary Assembly 6 Chromosome all unspanned-gaps 0 Primary Assembly 6 Chromosome assembled-molecule total-length 46512068 Primary Assembly 6 Chromosome assembled-molecule ungapped-length 46510868 Primary Assembly 6 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 6 Chromosome assembled-molecule scaffold-N50 46512068 Primary Assembly 6 Chromosome assembled-molecule spanned-gaps 12 Primary Assembly 6 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 6 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 6 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 6 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 6 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 6 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 6 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 7 Chromosome all total-length 30975534 Primary Assembly 7 Chromosome all ungapped-length 30973934 Primary Assembly 7 Chromosome all scaffold-count 1 Primary Assembly 7 Chromosome all scaffold-N50 30975534 Primary Assembly 7 Chromosome all spanned-gaps 16 Primary Assembly 7 Chromosome all unspanned-gaps 0 Primary Assembly 7 Chromosome assembled-molecule total-length 30975534 Primary Assembly 7 Chromosome assembled-molecule ungapped-length 30973934 Primary Assembly 7 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 7 Chromosome assembled-molecule scaffold-N50 30975534 Primary Assembly 7 Chromosome assembled-molecule spanned-gaps 16 Primary Assembly 7 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 7 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 7 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 7 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 7 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 7 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 7 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 8 Chromosome all total-length 49705205 Primary Assembly 8 Chromosome all ungapped-length 49702305 Primary Assembly 8 Chromosome all scaffold-count 1 Primary Assembly 8 Chromosome all scaffold-N50 49705205 Primary Assembly 8 Chromosome all spanned-gaps 29 Primary Assembly 8 Chromosome all unspanned-gaps 0 Primary Assembly 8 Chromosome assembled-molecule total-length 49705205 Primary Assembly 8 Chromosome assembled-molecule ungapped-length 49702305 Primary Assembly 8 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 8 Chromosome assembled-molecule scaffold-N50 49705205 Primary Assembly 8 Chromosome assembled-molecule spanned-gaps 29 Primary Assembly 8 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 8 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 8 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 8 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 8 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 8 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 8 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 9 Chromosome all total-length 35860388 Primary Assembly 9 Chromosome all ungapped-length 35859788 Primary Assembly 9 Chromosome all scaffold-count 1 Primary Assembly 9 Chromosome all scaffold-N50 35860388 Primary Assembly 9 Chromosome all spanned-gaps 6 Primary Assembly 9 Chromosome all unspanned-gaps 0 Primary Assembly 9 Chromosome assembled-molecule total-length 35860388 Primary Assembly 9 Chromosome assembled-molecule ungapped-length 35859788 Primary Assembly 9 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 9 Chromosome assembled-molecule scaffold-N50 35860388 Primary Assembly 9 Chromosome assembled-molecule spanned-gaps 6 Primary Assembly 9 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 9 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 9 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 9 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 9 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 9 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 9 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 10 Chromosome all total-length 41499577 Primary Assembly 10 Chromosome all ungapped-length 41497577 Primary Assembly 10 Chromosome all scaffold-count 1 Primary Assembly 10 Chromosome all scaffold-N50 41499577 Primary Assembly 10 Chromosome all spanned-gaps 20 Primary Assembly 10 Chromosome all unspanned-gaps 0 Primary Assembly 10 Chromosome assembled-molecule total-length 41499577 Primary Assembly 10 Chromosome assembled-molecule ungapped-length 41497577 Primary Assembly 10 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 10 Chromosome assembled-molecule scaffold-N50 41499577 Primary Assembly 10 Chromosome assembled-molecule spanned-gaps 20 Primary Assembly 10 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 10 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 10 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 10 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 10 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 10 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 10 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 11 Chromosome all total-length 30871617 Primary Assembly 11 Chromosome all ungapped-length 30869517 Primary Assembly 11 Chromosome all scaffold-count 1 Primary Assembly 11 Chromosome all scaffold-N50 30871617 Primary Assembly 11 Chromosome all spanned-gaps 21 Primary Assembly 11 Chromosome all unspanned-gaps 0 Primary Assembly 11 Chromosome assembled-molecule total-length 30871617 Primary Assembly 11 Chromosome assembled-molecule ungapped-length 30869517 Primary Assembly 11 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 11 Chromosome assembled-molecule scaffold-N50 30871617 Primary Assembly 11 Chromosome assembled-molecule spanned-gaps 21 Primary Assembly 11 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 11 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 11 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 11 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 11 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 11 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 11 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 12 Chromosome all total-length 29799933 Primary Assembly 12 Chromosome all ungapped-length 29797233 Primary Assembly 12 Chromosome all scaffold-count 1 Primary Assembly 12 Chromosome all scaffold-N50 29799933 Primary Assembly 12 Chromosome all spanned-gaps 27 Primary Assembly 12 Chromosome all unspanned-gaps 0 Primary Assembly 12 Chromosome assembled-molecule total-length 29799933 Primary Assembly 12 Chromosome assembled-molecule ungapped-length 29797233 Primary Assembly 12 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 12 Chromosome assembled-molecule scaffold-N50 29799933 Primary Assembly 12 Chromosome assembled-molecule spanned-gaps 27 Primary Assembly 12 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 12 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 12 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 12 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 12 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 12 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 12 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 13 Chromosome all total-length 41270226 Primary Assembly 13 Chromosome all ungapped-length 41269026 Primary Assembly 13 Chromosome all scaffold-count 1 Primary Assembly 13 Chromosome all scaffold-N50 41270226 Primary Assembly 13 Chromosome all spanned-gaps 12 Primary Assembly 13 Chromosome all unspanned-gaps 0 Primary Assembly 13 Chromosome assembled-molecule total-length 41270226 Primary Assembly 13 Chromosome assembled-molecule ungapped-length 41269026 Primary Assembly 13 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 13 Chromosome assembled-molecule scaffold-N50 41270226 Primary Assembly 13 Chromosome assembled-molecule spanned-gaps 12 Primary Assembly 13 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 13 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 13 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 13 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 13 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 13 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 13 Chromosome unlocalized-scaffold unspanned-gaps 0