# Assembly Statistics Report # Assembly name: ST_assembly # Organism name: Prunus davidiana (David's peach) # Infraspecific name: cultivar=ST # Taxid: 151430 # BioSample: SAMN15733324 # BioProject: PRJNA655343 # Submitter: Shandong Agricultural University # Date: 2021-10-05 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JACJUR01 # Assembly method: FALCON v. 0.4 # Expected final version: yes # Genome coverage: 390x # Sequencing technology: PacBio Sequel # RefSeq category: Representative Genome # GenBank assembly accession: GCA_020226225.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_020226375.1 Primary Assembly # # Statistic Types # Statistic Description # component-count Number of unique components # contig-L50 Number of contigs that are longer than, or equal to, the N50 length # contig-N50 Contig length at which 50% of total bases in assembly are in contigs of that length or greater # contig-count Number of contigs # molecule-count Number of chromosomes and plasmids in full assembly # region-count Number of genomic regions defined in full assembly # scaffold-L50 Number of scaffolds that are longer than, or equal to, the N50 length # scaffold-N50 Scaffold length at which 50% of total bases in assembly are in scaffolds of that length or greater # scaffold-N75 Scaffold length at which 75% of total bases in assembly are in contigs of that length or greater # scaffold-N90 scaffold length at which 90% of total bases in assembly are in contigs of that length or greater # scaffold-count Number of scaffolds # spanned-gaps Number of spanned gaps. Spanned gaps are gaps within a scaffold # top-level-count Number of chromosomes or plasmids, unplaced/unlocalized scaffolds, alt-loci scaffolds, and patch scaffolds # total-gap-length Total length of gaps # total-length Total sequence length including bases and gaps # ungapped-length Total length excluding gaps # unspanned-gaps Number of unspanned gaps. Unspanned gaps are gaps between scaffolds # # Sequence-type Description # all statistic covers all the sequences in the unit-assembly and molecule(s) specified. # molecule statistic covers the specified molecule. molecule-name and molecule-type/loc will be given. # unlocalized statistic covers the sequences assigned to a molecule but with no position. molecule-name and molecule-type/loc will be given. # unplaced statistic covers the sequences not assigned to any molecule in the assembly. # # unit-name molecule-name molecule-type/loc sequence-type statistic value all all all all total-length 243913910 all all all all spanned-gaps 168 all all all all unspanned-gaps 0 all all all all region-count 0 all all all all scaffold-count 127 all all all all scaffold-N50 28110464 all all all all scaffold-L50 4 all all all all scaffold-N75 24072776 all all all all scaffold-N90 20177691 all all all all contig-count 295 all all all all contig-N50 1620494 all all all all contig-L50 46 all all all all total-gap-length 16800 all all all all molecule-count 8 all all all all top-level-count 127 all all all all component-count 127 Primary Assembly all all all total-length 243913910 Primary Assembly all all all ungapped-length 243897110 Primary Assembly all all all scaffold-count 127 Primary Assembly all all all scaffold-N50 28110464 Primary Assembly all all all spanned-gaps 168 Primary Assembly all all all unspanned-gaps 0 Primary Assembly all all assembled-molecule total-length 230241573 Primary Assembly all all assembled-molecule ungapped-length 230224773 Primary Assembly all all assembled-molecule scaffold-count 8 Primary Assembly all all assembled-molecule scaffold-N50 28110464 Primary Assembly all all assembled-molecule spanned-gaps 168 Primary Assembly all all assembled-molecule unspanned-gaps 0 Primary Assembly all all unlocalized-scaffold total-length 0 Primary Assembly all all unlocalized-scaffold ungapped-length 0 Primary Assembly all all unlocalized-scaffold scaffold-count 0 Primary Assembly all all unlocalized-scaffold scaffold-N50 0 Primary Assembly all all unlocalized-scaffold spanned-gaps 0 Primary Assembly all all unlocalized-scaffold unspanned-gaps 0 Primary Assembly na na unplaced-scaffold total-length 13672337 Primary Assembly na na unplaced-scaffold ungapped-length 13672337 Primary Assembly na na unplaced-scaffold scaffold-count 119 Primary Assembly na na unplaced-scaffold scaffold-N50 230700 Primary Assembly na na unplaced-scaffold spanned-gaps 0 Primary Assembly na na unplaced-scaffold unspanned-gaps 0 Primary Assembly 1 Chromosome all total-length 47684052 Primary Assembly 1 Chromosome all ungapped-length 47681652 Primary Assembly 1 Chromosome all scaffold-count 1 Primary Assembly 1 Chromosome all scaffold-N50 47684052 Primary Assembly 1 Chromosome all spanned-gaps 24 Primary Assembly 1 Chromosome all unspanned-gaps 0 Primary Assembly 1 Chromosome assembled-molecule total-length 47684052 Primary Assembly 1 Chromosome assembled-molecule ungapped-length 47681652 Primary Assembly 1 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 1 Chromosome assembled-molecule scaffold-N50 47684052 Primary Assembly 1 Chromosome assembled-molecule spanned-gaps 24 Primary Assembly 1 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 1 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 1 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 1 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 1 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 1 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 1 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 2 Chromosome all total-length 32555474 Primary Assembly 2 Chromosome all ungapped-length 32553374 Primary Assembly 2 Chromosome all scaffold-count 1 Primary Assembly 2 Chromosome all scaffold-N50 32555474 Primary Assembly 2 Chromosome all spanned-gaps 21 Primary Assembly 2 Chromosome all unspanned-gaps 0 Primary Assembly 2 Chromosome assembled-molecule total-length 32555474 Primary Assembly 2 Chromosome assembled-molecule ungapped-length 32553374 Primary Assembly 2 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 2 Chromosome assembled-molecule scaffold-N50 32555474 Primary Assembly 2 Chromosome assembled-molecule spanned-gaps 21 Primary Assembly 2 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 2 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 2 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 2 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 2 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 2 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 2 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 3 Chromosome all total-length 30357996 Primary Assembly 3 Chromosome all ungapped-length 30354996 Primary Assembly 3 Chromosome all scaffold-count 1 Primary Assembly 3 Chromosome all scaffold-N50 30357996 Primary Assembly 3 Chromosome all spanned-gaps 30 Primary Assembly 3 Chromosome all unspanned-gaps 0 Primary Assembly 3 Chromosome assembled-molecule total-length 30357996 Primary Assembly 3 Chromosome assembled-molecule ungapped-length 30354996 Primary Assembly 3 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 3 Chromosome assembled-molecule scaffold-N50 30357996 Primary Assembly 3 Chromosome assembled-molecule spanned-gaps 30 Primary Assembly 3 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 3 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 3 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 3 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 3 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 3 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 3 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 4 Chromosome all total-length 28110464 Primary Assembly 4 Chromosome all ungapped-length 28108064 Primary Assembly 4 Chromosome all scaffold-count 1 Primary Assembly 4 Chromosome all scaffold-N50 28110464 Primary Assembly 4 Chromosome all spanned-gaps 24 Primary Assembly 4 Chromosome all unspanned-gaps 0 Primary Assembly 4 Chromosome assembled-molecule total-length 28110464 Primary Assembly 4 Chromosome assembled-molecule ungapped-length 28108064 Primary Assembly 4 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 4 Chromosome assembled-molecule scaffold-N50 28110464 Primary Assembly 4 Chromosome assembled-molecule spanned-gaps 24 Primary Assembly 4 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 4 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 4 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 4 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 4 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 4 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 4 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 5 Chromosome all total-length 24697266 Primary Assembly 5 Chromosome all ungapped-length 24695566 Primary Assembly 5 Chromosome all scaffold-count 1 Primary Assembly 5 Chromosome all scaffold-N50 24697266 Primary Assembly 5 Chromosome all spanned-gaps 17 Primary Assembly 5 Chromosome all unspanned-gaps 0 Primary Assembly 5 Chromosome assembled-molecule total-length 24697266 Primary Assembly 5 Chromosome assembled-molecule ungapped-length 24695566 Primary Assembly 5 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 5 Chromosome assembled-molecule scaffold-N50 24697266 Primary Assembly 5 Chromosome assembled-molecule spanned-gaps 17 Primary Assembly 5 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 5 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 5 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 5 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 5 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 5 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 5 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 6 Chromosome all total-length 24072776 Primary Assembly 6 Chromosome all ungapped-length 24070776 Primary Assembly 6 Chromosome all scaffold-count 1 Primary Assembly 6 Chromosome all scaffold-N50 24072776 Primary Assembly 6 Chromosome all spanned-gaps 20 Primary Assembly 6 Chromosome all unspanned-gaps 0 Primary Assembly 6 Chromosome assembled-molecule total-length 24072776 Primary Assembly 6 Chromosome assembled-molecule ungapped-length 24070776 Primary Assembly 6 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 6 Chromosome assembled-molecule scaffold-N50 24072776 Primary Assembly 6 Chromosome assembled-molecule spanned-gaps 20 Primary Assembly 6 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 6 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 6 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 6 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 6 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 6 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 6 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 7 Chromosome all total-length 22585854 Primary Assembly 7 Chromosome all ungapped-length 22584154 Primary Assembly 7 Chromosome all scaffold-count 1 Primary Assembly 7 Chromosome all scaffold-N50 22585854 Primary Assembly 7 Chromosome all spanned-gaps 17 Primary Assembly 7 Chromosome all unspanned-gaps 0 Primary Assembly 7 Chromosome assembled-molecule total-length 22585854 Primary Assembly 7 Chromosome assembled-molecule ungapped-length 22584154 Primary Assembly 7 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 7 Chromosome assembled-molecule scaffold-N50 22585854 Primary Assembly 7 Chromosome assembled-molecule spanned-gaps 17 Primary Assembly 7 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 7 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 7 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 7 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 7 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 7 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 7 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 8 Chromosome all total-length 20177691 Primary Assembly 8 Chromosome all ungapped-length 20176191 Primary Assembly 8 Chromosome all scaffold-count 1 Primary Assembly 8 Chromosome all scaffold-N50 20177691 Primary Assembly 8 Chromosome all spanned-gaps 15 Primary Assembly 8 Chromosome all unspanned-gaps 0 Primary Assembly 8 Chromosome assembled-molecule total-length 20177691 Primary Assembly 8 Chromosome assembled-molecule ungapped-length 20176191 Primary Assembly 8 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 8 Chromosome assembled-molecule scaffold-N50 20177691 Primary Assembly 8 Chromosome assembled-molecule spanned-gaps 15 Primary Assembly 8 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 8 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 8 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 8 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 8 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 8 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 8 Chromosome unlocalized-scaffold unspanned-gaps 0