# Assembly Statistics Report # Assembly name: ASM2211386v1 # Organism name: Chimonanthus praecox (wintersweet) # Infraspecific name: cultivar=HH(Hongyun) # Taxid: 13419 # BioSample: SAMN18148367 # BioProject: PRJNA704246 # Submitter: Henan Academy of Forestry # Date: 2022-02-10 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAINRJ01 # Assembly method: mecat2 v. 2 # Expected final version: yes # Genome coverage: 202.0x # Sequencing technology: PacBio Sequel # RefSeq category: Representative Genome # GenBank assembly accession: GCA_022113865.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_022114125.1 Primary Assembly # # Statistic Types # Statistic Description # component-count Number of unique components # contig-L50 Number of contigs that are longer than, or equal to, the N50 length # contig-N50 Contig length at which 50% of total bases in assembly are in contigs of that length or greater # contig-count Number of contigs # gc-perc gc-count/atgc-count as percentage # molecule-count Number of chromosomes and plasmids in full assembly # region-count Number of genomic regions defined in full assembly # scaffold-L50 Number of scaffolds that are longer than, or equal to, the N50 length # scaffold-N50 Scaffold length at which 50% of total bases in assembly are in scaffolds of that length or greater # scaffold-N75 Scaffold length at which 75% of total bases in assembly are in contigs of that length or greater # scaffold-N90 scaffold length at which 90% of total bases in assembly are in contigs of that length or greater # scaffold-count Number of scaffolds # spanned-gaps Number of spanned gaps. Spanned gaps are gaps within a scaffold # top-level-count Number of chromosomes or plasmids, unplaced/unlocalized scaffolds, alt-loci scaffolds, and patch scaffolds # total-gap-length Total length of gaps # total-length Total sequence length including bases and gaps # ungapped-length Total length excluding gaps # unspanned-gaps Number of unspanned gaps. Unspanned gaps are gaps between scaffolds # # Sequence-type Description # all statistic covers all the sequences in the unit-assembly and molecule(s) specified. # molecule statistic covers the specified molecule. molecule-name and molecule-type/loc will be given. # unlocalized statistic covers the sequences assigned to a molecule but with no position. molecule-name and molecule-type/loc will be given. # unplaced statistic covers the sequences not assigned to any molecule in the assembly. # # unit-name molecule-name molecule-type/loc sequence-type statistic value all all all all total-length 737025245 all all all all spanned-gaps 482 all all all all unspanned-gaps 0 all all all all region-count 0 all all all all scaffold-count 185 all all all all scaffold-N50 63913627 all all all all scaffold-L50 6 all all all all scaffold-N75 58125491 all all all all scaffold-N90 48354400 all all all all contig-count 667 all all all all contig-N50 8125651 all all all all contig-L50 24 all all all all total-gap-length 241000 all all all all molecule-count 11 all all all all top-level-count 185 all all all all component-count 185 all all all all gc-perc 36.5 Primary Assembly all all all total-length 737025245 Primary Assembly all all all ungapped-length 736784245 Primary Assembly all all all scaffold-count 185 Primary Assembly all all all scaffold-N50 63913627 Primary Assembly all all all spanned-gaps 482 Primary Assembly all all all unspanned-gaps 0 Primary Assembly all all all gc-perc 36.5 Primary Assembly all all assembled-molecule total-length 701003250 Primary Assembly all all assembled-molecule ungapped-length 700762250 Primary Assembly all all assembled-molecule scaffold-count 11 Primary Assembly all all assembled-molecule scaffold-N50 66253769 Primary Assembly all all assembled-molecule spanned-gaps 482 Primary Assembly all all assembled-molecule unspanned-gaps 0 Primary Assembly all all assembled-molecule gc-perc 36.5 Primary Assembly all all unlocalized-scaffold total-length 0 Primary Assembly all all unlocalized-scaffold ungapped-length 0 Primary Assembly all all unlocalized-scaffold scaffold-count 0 Primary Assembly all all unlocalized-scaffold scaffold-N50 0 Primary Assembly all all unlocalized-scaffold spanned-gaps 0 Primary Assembly all all unlocalized-scaffold unspanned-gaps 0 Primary Assembly na na unplaced-scaffold total-length 36021995 Primary Assembly na na unplaced-scaffold ungapped-length 36021995 Primary Assembly na na unplaced-scaffold scaffold-count 174 Primary Assembly na na unplaced-scaffold scaffold-N50 489207 Primary Assembly na na unplaced-scaffold spanned-gaps 0 Primary Assembly na na unplaced-scaffold unspanned-gaps 0 Primary Assembly na na unplaced-scaffold gc-perc 36 Primary Assembly 1 Chromosome all total-length 74004448 Primary Assembly 1 Chromosome all ungapped-length 73966448 Primary Assembly 1 Chromosome all scaffold-count 1 Primary Assembly 1 Chromosome all scaffold-N50 74004448 Primary Assembly 1 Chromosome all spanned-gaps 76 Primary Assembly 1 Chromosome all unspanned-gaps 0 Primary Assembly 1 Chromosome all gc-perc 36.5 Primary Assembly 1 Chromosome assembled-molecule total-length 74004448 Primary Assembly 1 Chromosome assembled-molecule ungapped-length 73966448 Primary Assembly 1 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 1 Chromosome assembled-molecule scaffold-N50 74004448 Primary Assembly 1 Chromosome assembled-molecule spanned-gaps 76 Primary Assembly 1 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 1 Chromosome assembled-molecule gc-perc 36.5 Primary Assembly 1 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 1 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 1 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 1 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 1 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 1 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 2 Chromosome all total-length 73193615 Primary Assembly 2 Chromosome all ungapped-length 73140615 Primary Assembly 2 Chromosome all scaffold-count 1 Primary Assembly 2 Chromosome all scaffold-N50 73193615 Primary Assembly 2 Chromosome all spanned-gaps 106 Primary Assembly 2 Chromosome all unspanned-gaps 0 Primary Assembly 2 Chromosome all gc-perc 36.5 Primary Assembly 2 Chromosome assembled-molecule total-length 73193615 Primary Assembly 2 Chromosome assembled-molecule ungapped-length 73140615 Primary Assembly 2 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 2 Chromosome assembled-molecule scaffold-N50 73193615 Primary Assembly 2 Chromosome assembled-molecule spanned-gaps 106 Primary Assembly 2 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 2 Chromosome assembled-molecule gc-perc 36.5 Primary Assembly 2 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 2 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 2 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 2 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 2 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 2 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 3 Chromosome all total-length 69889178 Primary Assembly 3 Chromosome all ungapped-length 69867178 Primary Assembly 3 Chromosome all scaffold-count 1 Primary Assembly 3 Chromosome all scaffold-N50 69889178 Primary Assembly 3 Chromosome all spanned-gaps 44 Primary Assembly 3 Chromosome all unspanned-gaps 0 Primary Assembly 3 Chromosome all gc-perc 37 Primary Assembly 3 Chromosome assembled-molecule total-length 69889178 Primary Assembly 3 Chromosome assembled-molecule ungapped-length 69867178 Primary Assembly 3 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 3 Chromosome assembled-molecule scaffold-N50 69889178 Primary Assembly 3 Chromosome assembled-molecule spanned-gaps 44 Primary Assembly 3 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 3 Chromosome assembled-molecule gc-perc 37 Primary Assembly 3 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 3 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 3 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 3 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 3 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 3 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 4 Chromosome all total-length 69342401 Primary Assembly 4 Chromosome all ungapped-length 69335901 Primary Assembly 4 Chromosome all scaffold-count 1 Primary Assembly 4 Chromosome all scaffold-N50 69342401 Primary Assembly 4 Chromosome all spanned-gaps 13 Primary Assembly 4 Chromosome all unspanned-gaps 0 Primary Assembly 4 Chromosome all gc-perc 36.5 Primary Assembly 4 Chromosome assembled-molecule total-length 69342401 Primary Assembly 4 Chromosome assembled-molecule ungapped-length 69335901 Primary Assembly 4 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 4 Chromosome assembled-molecule scaffold-N50 69342401 Primary Assembly 4 Chromosome assembled-molecule spanned-gaps 13 Primary Assembly 4 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 4 Chromosome assembled-molecule gc-perc 36.5 Primary Assembly 4 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 4 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 4 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 4 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 4 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 4 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 5 Chromosome all total-length 66253769 Primary Assembly 5 Chromosome all ungapped-length 66225269 Primary Assembly 5 Chromosome all scaffold-count 1 Primary Assembly 5 Chromosome all scaffold-N50 66253769 Primary Assembly 5 Chromosome all spanned-gaps 57 Primary Assembly 5 Chromosome all unspanned-gaps 0 Primary Assembly 5 Chromosome all gc-perc 36.5 Primary Assembly 5 Chromosome assembled-molecule total-length 66253769 Primary Assembly 5 Chromosome assembled-molecule ungapped-length 66225269 Primary Assembly 5 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 5 Chromosome assembled-molecule scaffold-N50 66253769 Primary Assembly 5 Chromosome assembled-molecule spanned-gaps 57 Primary Assembly 5 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 5 Chromosome assembled-molecule gc-perc 36.5 Primary Assembly 5 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 5 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 5 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 5 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 5 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 5 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 6 Chromosome all total-length 63913627 Primary Assembly 6 Chromosome all ungapped-length 63904627 Primary Assembly 6 Chromosome all scaffold-count 1 Primary Assembly 6 Chromosome all scaffold-N50 63913627 Primary Assembly 6 Chromosome all spanned-gaps 18 Primary Assembly 6 Chromosome all unspanned-gaps 0 Primary Assembly 6 Chromosome all gc-perc 37 Primary Assembly 6 Chromosome assembled-molecule total-length 63913627 Primary Assembly 6 Chromosome assembled-molecule ungapped-length 63904627 Primary Assembly 6 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 6 Chromosome assembled-molecule scaffold-N50 63913627 Primary Assembly 6 Chromosome assembled-molecule spanned-gaps 18 Primary Assembly 6 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 6 Chromosome assembled-molecule gc-perc 37 Primary Assembly 6 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 6 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 6 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 6 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 6 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 6 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 7 Chromosome all total-length 63380190 Primary Assembly 7 Chromosome all ungapped-length 63360190 Primary Assembly 7 Chromosome all scaffold-count 1 Primary Assembly 7 Chromosome all scaffold-N50 63380190 Primary Assembly 7 Chromosome all spanned-gaps 40 Primary Assembly 7 Chromosome all unspanned-gaps 0 Primary Assembly 7 Chromosome all gc-perc 36.5 Primary Assembly 7 Chromosome assembled-molecule total-length 63380190 Primary Assembly 7 Chromosome assembled-molecule ungapped-length 63360190 Primary Assembly 7 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 7 Chromosome assembled-molecule scaffold-N50 63380190 Primary Assembly 7 Chromosome assembled-molecule spanned-gaps 40 Primary Assembly 7 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 7 Chromosome assembled-molecule gc-perc 36.5 Primary Assembly 7 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 7 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 7 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 7 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 7 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 7 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 8 Chromosome all total-length 58950543 Primary Assembly 8 Chromosome all ungapped-length 58939043 Primary Assembly 8 Chromosome all scaffold-count 1 Primary Assembly 8 Chromosome all scaffold-N50 58950543 Primary Assembly 8 Chromosome all spanned-gaps 23 Primary Assembly 8 Chromosome all unspanned-gaps 0 Primary Assembly 8 Chromosome all gc-perc 36.5 Primary Assembly 8 Chromosome assembled-molecule total-length 58950543 Primary Assembly 8 Chromosome assembled-molecule ungapped-length 58939043 Primary Assembly 8 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 8 Chromosome assembled-molecule scaffold-N50 58950543 Primary Assembly 8 Chromosome assembled-molecule spanned-gaps 23 Primary Assembly 8 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 8 Chromosome assembled-molecule gc-perc 36.5 Primary Assembly 8 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 8 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 8 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 8 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 8 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 8 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 9 Chromosome all total-length 58125491 Primary Assembly 9 Chromosome all ungapped-length 58104491 Primary Assembly 9 Chromosome all scaffold-count 1 Primary Assembly 9 Chromosome all scaffold-N50 58125491 Primary Assembly 9 Chromosome all spanned-gaps 42 Primary Assembly 9 Chromosome all unspanned-gaps 0 Primary Assembly 9 Chromosome all gc-perc 37 Primary Assembly 9 Chromosome assembled-molecule total-length 58125491 Primary Assembly 9 Chromosome assembled-molecule ungapped-length 58104491 Primary Assembly 9 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 9 Chromosome assembled-molecule scaffold-N50 58125491 Primary Assembly 9 Chromosome assembled-molecule spanned-gaps 42 Primary Assembly 9 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 9 Chromosome assembled-molecule gc-perc 37 Primary Assembly 9 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 9 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 9 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 9 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 9 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 9 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 10 Chromosome all total-length 55595588 Primary Assembly 10 Chromosome all ungapped-length 55586088 Primary Assembly 10 Chromosome all scaffold-count 1 Primary Assembly 10 Chromosome all scaffold-N50 55595588 Primary Assembly 10 Chromosome all spanned-gaps 19 Primary Assembly 10 Chromosome all unspanned-gaps 0 Primary Assembly 10 Chromosome all gc-perc 36.5 Primary Assembly 10 Chromosome assembled-molecule total-length 55595588 Primary Assembly 10 Chromosome assembled-molecule ungapped-length 55586088 Primary Assembly 10 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 10 Chromosome assembled-molecule scaffold-N50 55595588 Primary Assembly 10 Chromosome assembled-molecule spanned-gaps 19 Primary Assembly 10 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 10 Chromosome assembled-molecule gc-perc 36.5 Primary Assembly 10 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 10 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 10 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 10 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 10 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 10 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 11 Chromosome all total-length 48354400 Primary Assembly 11 Chromosome all ungapped-length 48332400 Primary Assembly 11 Chromosome all scaffold-count 1 Primary Assembly 11 Chromosome all scaffold-N50 48354400 Primary Assembly 11 Chromosome all spanned-gaps 44 Primary Assembly 11 Chromosome all unspanned-gaps 0 Primary Assembly 11 Chromosome all gc-perc 37 Primary Assembly 11 Chromosome assembled-molecule total-length 48354400 Primary Assembly 11 Chromosome assembled-molecule ungapped-length 48332400 Primary Assembly 11 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 11 Chromosome assembled-molecule scaffold-N50 48354400 Primary Assembly 11 Chromosome assembled-molecule spanned-gaps 44 Primary Assembly 11 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 11 Chromosome assembled-molecule gc-perc 37 Primary Assembly 11 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 11 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 11 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 11 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 11 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 11 Chromosome unlocalized-scaffold unspanned-gaps 0