# Assembly Statistics Report # Assembly name: ASM2351283v1 # Organism name: Taxillus chinensis (eudicots) # Isolate: SW_2021 # Taxid: 227909 # BioSample: SAMN23245950 # BioProject: PRJNA781352 # Submitter: Guangxi Botanical Garden of Medicinal Plants # Date: 2022-05-25 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAKCVP01 # Assembly method: Necat v. Mar-2021; Racon v. Mar-2021 # Expected final version: yes # Genome coverage: 100.0x # Sequencing technology: Nanopore; DNBSEQ; Hi-C # RefSeq category: Representative Genome # GenBank assembly accession: GCA_023512835.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_023512885.1 Primary Assembly # # Statistic Types # Statistic Description # component-count Number of unique components # contig-L50 Number of contigs that are longer than, or equal to, the N50 length # contig-N50 Contig length at which 50% of total bases in assembly are in contigs of that length or greater # contig-count Number of contigs # gc-perc gc-count/atgc-count as percentage # molecule-count Number of chromosomes and plasmids in full assembly # region-count Number of genomic regions defined in full assembly # scaffold-L50 Number of scaffolds that are longer than, or equal to, the N50 length # scaffold-N50 Scaffold length at which 50% of total bases in assembly are in scaffolds of that length or greater # scaffold-N75 Scaffold length at which 75% of total bases in assembly are in contigs of that length or greater # scaffold-N90 scaffold length at which 90% of total bases in assembly are in contigs of that length or greater # scaffold-count Number of scaffolds # spanned-gaps Number of spanned gaps. Spanned gaps are gaps within a scaffold # top-level-count Number of chromosomes or plasmids, unplaced/unlocalized scaffolds, alt-loci scaffolds, and patch scaffolds # total-gap-length Total length of gaps # total-length Total sequence length including bases and gaps # ungapped-length Total length excluding gaps # unspanned-gaps Number of unspanned gaps. Unspanned gaps are gaps between scaffolds # # Sequence-type Description # all statistic covers all the sequences in the unit-assembly and molecule(s) specified. # molecule statistic covers the specified molecule. molecule-name and molecule-type/loc will be given. # unlocalized statistic covers the sequences assigned to a molecule but with no position. molecule-name and molecule-type/loc will be given. # unplaced statistic covers the sequences not assigned to any molecule in the assembly. # # unit-name molecule-name molecule-type/loc sequence-type statistic value all all all all total-length 521908327 all all all all spanned-gaps 452 all all all all unspanned-gaps 0 all all all all region-count 0 all all all all scaffold-count 434 all all all all scaffold-N50 56927202 all all all all scaffold-L50 5 all all all all scaffold-N75 51672168 all all all all scaffold-N90 47601956 all all all all contig-count 886 all all all all contig-N50 2895698 all all all all contig-L50 52 all all all all total-gap-length 225063 all all all all molecule-count 9 all all all all top-level-count 434 all all all all component-count 434 all all all all gc-perc 40 Primary Assembly all all all total-length 521908327 Primary Assembly all all all ungapped-length 521683264 Primary Assembly all all all scaffold-count 434 Primary Assembly all all all scaffold-N50 56927202 Primary Assembly all all all spanned-gaps 452 Primary Assembly all all all unspanned-gaps 0 Primary Assembly all all all gc-perc 40 Primary Assembly all all assembled-molecule total-length 496429085 Primary Assembly all all assembled-molecule ungapped-length 496204022 Primary Assembly all all assembled-molecule scaffold-count 9 Primary Assembly all all assembled-molecule scaffold-N50 56927202 Primary Assembly all all assembled-molecule spanned-gaps 452 Primary Assembly all all assembled-molecule unspanned-gaps 0 Primary Assembly all all assembled-molecule gc-perc 39.5 Primary Assembly all all unlocalized-scaffold total-length 0 Primary Assembly all all unlocalized-scaffold ungapped-length 0 Primary Assembly all all unlocalized-scaffold scaffold-count 0 Primary Assembly all all unlocalized-scaffold scaffold-N50 0 Primary Assembly all all unlocalized-scaffold spanned-gaps 0 Primary Assembly all all unlocalized-scaffold unspanned-gaps 0 Primary Assembly na na unplaced-scaffold total-length 25479242 Primary Assembly na na unplaced-scaffold ungapped-length 25479242 Primary Assembly na na unplaced-scaffold scaffold-count 425 Primary Assembly na na unplaced-scaffold scaffold-N50 185480 Primary Assembly na na unplaced-scaffold spanned-gaps 0 Primary Assembly na na unplaced-scaffold unspanned-gaps 0 Primary Assembly na na unplaced-scaffold gc-perc 51 Primary Assembly 1 Chromosome all total-length 58110606 Primary Assembly 1 Chromosome all ungapped-length 58067106 Primary Assembly 1 Chromosome all scaffold-count 1 Primary Assembly 1 Chromosome all scaffold-N50 58110606 Primary Assembly 1 Chromosome all spanned-gaps 87 Primary Assembly 1 Chromosome all unspanned-gaps 0 Primary Assembly 1 Chromosome all gc-perc 39.5 Primary Assembly 1 Chromosome assembled-molecule total-length 58110606 Primary Assembly 1 Chromosome assembled-molecule ungapped-length 58067106 Primary Assembly 1 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 1 Chromosome assembled-molecule scaffold-N50 58110606 Primary Assembly 1 Chromosome assembled-molecule spanned-gaps 87 Primary Assembly 1 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 1 Chromosome assembled-molecule gc-perc 39.5 Primary Assembly 1 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 1 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 1 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 1 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 1 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 1 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 2 Chromosome all total-length 51672168 Primary Assembly 2 Chromosome all ungapped-length 51647636 Primary Assembly 2 Chromosome all scaffold-count 1 Primary Assembly 2 Chromosome all scaffold-N50 51672168 Primary Assembly 2 Chromosome all spanned-gaps 50 Primary Assembly 2 Chromosome all unspanned-gaps 0 Primary Assembly 2 Chromosome all gc-perc 40 Primary Assembly 2 Chromosome assembled-molecule total-length 51672168 Primary Assembly 2 Chromosome assembled-molecule ungapped-length 51647636 Primary Assembly 2 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 2 Chromosome assembled-molecule scaffold-N50 51672168 Primary Assembly 2 Chromosome assembled-molecule spanned-gaps 50 Primary Assembly 2 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 2 Chromosome assembled-molecule gc-perc 40 Primary Assembly 2 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 2 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 2 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 2 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 2 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 2 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 3 Chromosome all total-length 47601956 Primary Assembly 3 Chromosome all ungapped-length 47586956 Primary Assembly 3 Chromosome all scaffold-count 1 Primary Assembly 3 Chromosome all scaffold-N50 47601956 Primary Assembly 3 Chromosome all spanned-gaps 30 Primary Assembly 3 Chromosome all unspanned-gaps 0 Primary Assembly 3 Chromosome all gc-perc 39.5 Primary Assembly 3 Chromosome assembled-molecule total-length 47601956 Primary Assembly 3 Chromosome assembled-molecule ungapped-length 47586956 Primary Assembly 3 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 3 Chromosome assembled-molecule scaffold-N50 47601956 Primary Assembly 3 Chromosome assembled-molecule spanned-gaps 30 Primary Assembly 3 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 3 Chromosome assembled-molecule gc-perc 39.5 Primary Assembly 3 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 3 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 3 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 3 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 3 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 3 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 4 Chromosome all total-length 56927202 Primary Assembly 4 Chromosome all ungapped-length 56901702 Primary Assembly 4 Chromosome all scaffold-count 1 Primary Assembly 4 Chromosome all scaffold-N50 56927202 Primary Assembly 4 Chromosome all spanned-gaps 51 Primary Assembly 4 Chromosome all unspanned-gaps 0 Primary Assembly 4 Chromosome all gc-perc 39.5 Primary Assembly 4 Chromosome assembled-molecule total-length 56927202 Primary Assembly 4 Chromosome assembled-molecule ungapped-length 56901702 Primary Assembly 4 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 4 Chromosome assembled-molecule scaffold-N50 56927202 Primary Assembly 4 Chromosome assembled-molecule spanned-gaps 51 Primary Assembly 4 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 4 Chromosome assembled-molecule gc-perc 39.5 Primary Assembly 4 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 4 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 4 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 4 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 4 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 4 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 5 Chromosome all total-length 59987258 Primary Assembly 5 Chromosome all ungapped-length 59973758 Primary Assembly 5 Chromosome all scaffold-count 1 Primary Assembly 5 Chromosome all scaffold-N50 59987258 Primary Assembly 5 Chromosome all spanned-gaps 27 Primary Assembly 5 Chromosome all unspanned-gaps 0 Primary Assembly 5 Chromosome all gc-perc 40 Primary Assembly 5 Chromosome assembled-molecule total-length 59987258 Primary Assembly 5 Chromosome assembled-molecule ungapped-length 59973758 Primary Assembly 5 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 5 Chromosome assembled-molecule scaffold-N50 59987258 Primary Assembly 5 Chromosome assembled-molecule spanned-gaps 27 Primary Assembly 5 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 5 Chromosome assembled-molecule gc-perc 40 Primary Assembly 5 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 5 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 5 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 5 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 5 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 5 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 6 Chromosome all total-length 57320535 Primary Assembly 6 Chromosome all ungapped-length 57295535 Primary Assembly 6 Chromosome all scaffold-count 1 Primary Assembly 6 Chromosome all scaffold-N50 57320535 Primary Assembly 6 Chromosome all spanned-gaps 50 Primary Assembly 6 Chromosome all unspanned-gaps 0 Primary Assembly 6 Chromosome all gc-perc 40 Primary Assembly 6 Chromosome assembled-molecule total-length 57320535 Primary Assembly 6 Chromosome assembled-molecule ungapped-length 57295535 Primary Assembly 6 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 6 Chromosome assembled-molecule scaffold-N50 57320535 Primary Assembly 6 Chromosome assembled-molecule spanned-gaps 50 Primary Assembly 6 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 6 Chromosome assembled-molecule gc-perc 40 Primary Assembly 6 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 6 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 6 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 6 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 6 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 6 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 7 Chromosome all total-length 58535009 Primary Assembly 7 Chromosome all ungapped-length 58509009 Primary Assembly 7 Chromosome all scaffold-count 1 Primary Assembly 7 Chromosome all scaffold-N50 58535009 Primary Assembly 7 Chromosome all spanned-gaps 52 Primary Assembly 7 Chromosome all unspanned-gaps 0 Primary Assembly 7 Chromosome all gc-perc 39 Primary Assembly 7 Chromosome assembled-molecule total-length 58535009 Primary Assembly 7 Chromosome assembled-molecule ungapped-length 58509009 Primary Assembly 7 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 7 Chromosome assembled-molecule scaffold-N50 58535009 Primary Assembly 7 Chromosome assembled-molecule spanned-gaps 52 Primary Assembly 7 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 7 Chromosome assembled-molecule gc-perc 39 Primary Assembly 7 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 7 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 7 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 7 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 7 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 7 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 8 Chromosome all total-length 50303857 Primary Assembly 8 Chromosome all ungapped-length 50272857 Primary Assembly 8 Chromosome all scaffold-count 1 Primary Assembly 8 Chromosome all scaffold-N50 50303857 Primary Assembly 8 Chromosome all spanned-gaps 62 Primary Assembly 8 Chromosome all unspanned-gaps 0 Primary Assembly 8 Chromosome all gc-perc 39.5 Primary Assembly 8 Chromosome assembled-molecule total-length 50303857 Primary Assembly 8 Chromosome assembled-molecule ungapped-length 50272857 Primary Assembly 8 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 8 Chromosome assembled-molecule scaffold-N50 50303857 Primary Assembly 8 Chromosome assembled-molecule spanned-gaps 62 Primary Assembly 8 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 8 Chromosome assembled-molecule gc-perc 39.5 Primary Assembly 8 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 8 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 8 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 8 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 8 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 8 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 9 Chromosome all total-length 55970494 Primary Assembly 9 Chromosome all ungapped-length 55949463 Primary Assembly 9 Chromosome all scaffold-count 1 Primary Assembly 9 Chromosome all scaffold-N50 55970494 Primary Assembly 9 Chromosome all spanned-gaps 43 Primary Assembly 9 Chromosome all unspanned-gaps 0 Primary Assembly 9 Chromosome all gc-perc 40 Primary Assembly 9 Chromosome assembled-molecule total-length 55970494 Primary Assembly 9 Chromosome assembled-molecule ungapped-length 55949463 Primary Assembly 9 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 9 Chromosome assembled-molecule scaffold-N50 55970494 Primary Assembly 9 Chromosome assembled-molecule spanned-gaps 43 Primary Assembly 9 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 9 Chromosome assembled-molecule gc-perc 40 Primary Assembly 9 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 9 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 9 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 9 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 9 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 9 Chromosome unlocalized-scaffold unspanned-gaps 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