# Assembly Statistics Report # Assembly name: guava_v11.23 # Organism name: Psidium guajava (guava) # Infraspecific name: cultivar=New Age # Isolate: Zhanjiang # Taxid: 120290 # BioSample: SAMN16955458 # BioProject: PRJNA631442 # Submitter: South China Botanical Garden # Date: 2021-01-06 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAEAMS01 # Assembly method: FALCON v. 0.3 # Expected final version: no # Genome coverage: 115.0x # Sequencing technology: PacBio Sequel # RefSeq category: Representative Genome # GenBank assembly accession: GCA_016432845.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_016432885.1 Primary Assembly # # Statistic Types # Statistic Description # component-count Number of unique components # contig-L50 Number of contigs that are longer than, or equal to, the N50 length # contig-N50 Contig length at which 50% of total bases in assembly are in contigs of that length or greater # contig-count Number of contigs # molecule-count Number of chromosomes and plasmids in full assembly # region-count Number of genomic regions defined in full assembly # scaffold-L50 Number of scaffolds that are longer than, or equal to, the N50 length # scaffold-N50 Scaffold length at which 50% of total bases in assembly are in scaffolds of that length or greater # scaffold-N75 Scaffold length at which 75% of total bases in assembly are in contigs of that length or greater # scaffold-N90 scaffold length at which 90% of total bases in assembly are in contigs of that length or greater # scaffold-count Number of scaffolds # spanned-gaps Number of spanned gaps. Spanned gaps are gaps within a scaffold # top-level-count Number of chromosomes or plasmids, unplaced/unlocalized scaffolds, alt-loci scaffolds, and patch scaffolds # total-gap-length Total length of gaps # total-length Total sequence length including bases and gaps # ungapped-length Total length excluding gaps # unspanned-gaps Number of unspanned gaps. Unspanned gaps are gaps between scaffolds # # Sequence-type Description # all statistic covers all the sequences in the unit-assembly and molecule(s) specified. # molecule statistic covers the specified molecule. molecule-name and molecule-type/loc will be given. # unlocalized statistic covers the sequences assigned to a molecule but with no position. molecule-name and molecule-type/loc will be given. # unplaced statistic covers the sequences not assigned to any molecule in the assembly. # # unit-name molecule-name molecule-type/loc sequence-type statistic value all all all all total-length 443755635 all all all all spanned-gaps 29 all all all all unspanned-gaps 0 all all all all region-count 0 all all all all scaffold-count 44 all all all all scaffold-N50 40370300 all all all all scaffold-L50 5 all all all all scaffold-N75 37021556 all all all all scaffold-N90 33379055 all all all all contig-count 73 all all all all contig-N50 15807569 all all all all contig-L50 9 all all all all total-gap-length 2900 all all all all molecule-count 11 all all all all top-level-count 44 all all all all component-count 44 Primary Assembly all all all total-length 443755635 Primary Assembly all all all ungapped-length 443752735 Primary Assembly all all all scaffold-count 44 Primary Assembly all all all scaffold-N50 40370300 Primary Assembly all all all spanned-gaps 29 Primary Assembly all all all unspanned-gaps 0 Primary Assembly all all assembled-molecule total-length 441269931 Primary Assembly all all assembled-molecule ungapped-length 441267031 Primary Assembly all all assembled-molecule scaffold-count 11 Primary Assembly all all assembled-molecule scaffold-N50 40370300 Primary Assembly all all assembled-molecule spanned-gaps 29 Primary Assembly all all assembled-molecule unspanned-gaps 0 Primary Assembly all all unlocalized-scaffold total-length 0 Primary Assembly all all unlocalized-scaffold ungapped-length 0 Primary Assembly all all unlocalized-scaffold scaffold-count 0 Primary Assembly all all unlocalized-scaffold scaffold-N50 0 Primary Assembly all all unlocalized-scaffold spanned-gaps 0 Primary Assembly all all unlocalized-scaffold unspanned-gaps 0 Primary Assembly na na unplaced-scaffold total-length 2485704 Primary Assembly na na unplaced-scaffold ungapped-length 2485704 Primary Assembly na na unplaced-scaffold scaffold-count 33 Primary Assembly na na unplaced-scaffold scaffold-N50 88601 Primary Assembly na na unplaced-scaffold spanned-gaps 0 Primary Assembly na na unplaced-scaffold unspanned-gaps 0 Primary Assembly 1 Chromosome all total-length 40370300 Primary Assembly 1 Chromosome all ungapped-length 40370000 Primary Assembly 1 Chromosome all scaffold-count 1 Primary Assembly 1 Chromosome all scaffold-N50 40370300 Primary Assembly 1 Chromosome all spanned-gaps 3 Primary Assembly 1 Chromosome all unspanned-gaps 0 Primary Assembly 1 Chromosome assembled-molecule total-length 40370300 Primary Assembly 1 Chromosome assembled-molecule ungapped-length 40370000 Primary Assembly 1 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 1 Chromosome assembled-molecule scaffold-N50 40370300 Primary Assembly 1 Chromosome assembled-molecule spanned-gaps 3 Primary Assembly 1 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 1 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 1 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 1 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 1 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 1 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 1 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 2 Chromosome all total-length 38465871 Primary Assembly 2 Chromosome all ungapped-length 38465571 Primary Assembly 2 Chromosome all scaffold-count 1 Primary Assembly 2 Chromosome all scaffold-N50 38465871 Primary Assembly 2 Chromosome all spanned-gaps 3 Primary Assembly 2 Chromosome all unspanned-gaps 0 Primary Assembly 2 Chromosome assembled-molecule total-length 38465871 Primary Assembly 2 Chromosome assembled-molecule ungapped-length 38465571 Primary Assembly 2 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 2 Chromosome assembled-molecule scaffold-N50 38465871 Primary Assembly 2 Chromosome assembled-molecule spanned-gaps 3 Primary Assembly 2 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 2 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 2 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 2 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 2 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 2 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 2 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 3 Chromosome all total-length 50577630 Primary Assembly 3 Chromosome all ungapped-length 50577330 Primary Assembly 3 Chromosome all scaffold-count 1 Primary Assembly 3 Chromosome all scaffold-N50 50577630 Primary Assembly 3 Chromosome all spanned-gaps 3 Primary Assembly 3 Chromosome all unspanned-gaps 0 Primary Assembly 3 Chromosome assembled-molecule total-length 50577630 Primary Assembly 3 Chromosome assembled-molecule ungapped-length 50577330 Primary Assembly 3 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 3 Chromosome assembled-molecule scaffold-N50 50577630 Primary Assembly 3 Chromosome assembled-molecule spanned-gaps 3 Primary Assembly 3 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 3 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 3 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 3 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 3 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 3 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 3 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 4 Chromosome all total-length 48287879 Primary Assembly 4 Chromosome all ungapped-length 48287779 Primary Assembly 4 Chromosome all scaffold-count 1 Primary Assembly 4 Chromosome all scaffold-N50 48287879 Primary Assembly 4 Chromosome all spanned-gaps 1 Primary Assembly 4 Chromosome all unspanned-gaps 0 Primary Assembly 4 Chromosome assembled-molecule total-length 48287879 Primary Assembly 4 Chromosome assembled-molecule ungapped-length 48287779 Primary Assembly 4 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 4 Chromosome assembled-molecule scaffold-N50 48287879 Primary Assembly 4 Chromosome assembled-molecule spanned-gaps 1 Primary Assembly 4 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 4 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 4 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 4 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 4 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 4 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 4 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 5 Chromosome all total-length 44769864 Primary Assembly 5 Chromosome all ungapped-length 44769564 Primary Assembly 5 Chromosome all scaffold-count 1 Primary Assembly 5 Chromosome all scaffold-N50 44769864 Primary Assembly 5 Chromosome all spanned-gaps 3 Primary Assembly 5 Chromosome all unspanned-gaps 0 Primary Assembly 5 Chromosome assembled-molecule total-length 44769864 Primary Assembly 5 Chromosome assembled-molecule ungapped-length 44769564 Primary Assembly 5 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 5 Chromosome assembled-molecule scaffold-N50 44769864 Primary Assembly 5 Chromosome assembled-molecule spanned-gaps 3 Primary Assembly 5 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 5 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 5 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 5 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 5 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 5 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 5 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 6 Chromosome all total-length 42823316 Primary Assembly 6 Chromosome all ungapped-length 42822916 Primary Assembly 6 Chromosome all scaffold-count 1 Primary Assembly 6 Chromosome all scaffold-N50 42823316 Primary Assembly 6 Chromosome all spanned-gaps 4 Primary Assembly 6 Chromosome all unspanned-gaps 0 Primary Assembly 6 Chromosome assembled-molecule total-length 42823316 Primary Assembly 6 Chromosome assembled-molecule ungapped-length 42822916 Primary Assembly 6 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 6 Chromosome assembled-molecule scaffold-N50 42823316 Primary Assembly 6 Chromosome assembled-molecule spanned-gaps 4 Primary Assembly 6 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 6 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 6 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 6 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 6 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 6 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 6 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 7 Chromosome all total-length 35363649 Primary Assembly 7 Chromosome all ungapped-length 35363249 Primary Assembly 7 Chromosome all scaffold-count 1 Primary Assembly 7 Chromosome all scaffold-N50 35363649 Primary Assembly 7 Chromosome all spanned-gaps 4 Primary Assembly 7 Chromosome all unspanned-gaps 0 Primary Assembly 7 Chromosome assembled-molecule total-length 35363649 Primary Assembly 7 Chromosome assembled-molecule ungapped-length 35363249 Primary Assembly 7 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 7 Chromosome assembled-molecule scaffold-N50 35363649 Primary Assembly 7 Chromosome assembled-molecule spanned-gaps 4 Primary Assembly 7 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 7 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 7 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 7 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 7 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 7 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 7 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 8 Chromosome all total-length 33379055 Primary Assembly 8 Chromosome all ungapped-length 33378855 Primary Assembly 8 Chromosome all scaffold-count 1 Primary Assembly 8 Chromosome all scaffold-N50 33379055 Primary Assembly 8 Chromosome all spanned-gaps 2 Primary Assembly 8 Chromosome all unspanned-gaps 0 Primary Assembly 8 Chromosome assembled-molecule total-length 33379055 Primary Assembly 8 Chromosome assembled-molecule ungapped-length 33378855 Primary Assembly 8 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 8 Chromosome assembled-molecule scaffold-N50 33379055 Primary Assembly 8 Chromosome assembled-molecule spanned-gaps 2 Primary Assembly 8 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 8 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 8 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 8 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 8 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 8 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 8 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 9 Chromosome all total-length 32331238 Primary Assembly 9 Chromosome all ungapped-length 32331138 Primary Assembly 9 Chromosome all scaffold-count 1 Primary Assembly 9 Chromosome all scaffold-N50 32331238 Primary Assembly 9 Chromosome all spanned-gaps 1 Primary Assembly 9 Chromosome all unspanned-gaps 0 Primary Assembly 9 Chromosome assembled-molecule total-length 32331238 Primary Assembly 9 Chromosome assembled-molecule ungapped-length 32331138 Primary Assembly 9 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 9 Chromosome assembled-molecule scaffold-N50 32331238 Primary Assembly 9 Chromosome assembled-molecule spanned-gaps 1 Primary Assembly 9 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 9 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 9 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 9 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 9 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 9 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 9 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 10 Chromosome all total-length 37879573 Primary Assembly 10 Chromosome all ungapped-length 37879073 Primary Assembly 10 Chromosome all scaffold-count 1 Primary Assembly 10 Chromosome all scaffold-N50 37879573 Primary Assembly 10 Chromosome all spanned-gaps 5 Primary Assembly 10 Chromosome all unspanned-gaps 0 Primary Assembly 10 Chromosome assembled-molecule total-length 37879573 Primary Assembly 10 Chromosome assembled-molecule ungapped-length 37879073 Primary Assembly 10 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 10 Chromosome assembled-molecule scaffold-N50 37879573 Primary Assembly 10 Chromosome assembled-molecule spanned-gaps 5 Primary Assembly 10 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 10 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 10 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 10 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 10 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 10 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 10 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 11 Chromosome all total-length 37021556 Primary Assembly 11 Chromosome all ungapped-length 37021556 Primary Assembly 11 Chromosome all scaffold-count 1 Primary Assembly 11 Chromosome all scaffold-N50 37021556 Primary Assembly 11 Chromosome all spanned-gaps 0 Primary Assembly 11 Chromosome all unspanned-gaps 0 Primary Assembly 11 Chromosome assembled-molecule total-length 37021556 Primary Assembly 11 Chromosome assembled-molecule ungapped-length 37021556 Primary Assembly 11 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 11 Chromosome assembled-molecule scaffold-N50 37021556 Primary Assembly 11 Chromosome assembled-molecule spanned-gaps 0 Primary Assembly 11 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 11 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 11 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 11 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 11 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 11 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 11 Chromosome unlocalized-scaffold unspanned-gaps 0