# Assembly Statistics Report # Assembly name: ASM1573044v1 # Organism name: Prunus persica (peach) # Infraspecific name: cultivar=Rui You Pan 1 # Taxid: 3760 # BioSample: SAMN16120604 # BioProject: PRJNA663120 # Submitter: Beijing Academy of Agriculture and Forestry Sciences # Date: 2020-12-09 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JACYOW01 # Assembly method: Celera Assembler v. 1.8 # Expected final version: yes # Reference guided assembly: GCA_000346465.2 # Genome coverage: 589.74x # Sequencing technology: PacBio RSII # GenBank assembly accession: GCA_015730445.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_015730475.1 Primary Assembly # # Statistic Types # Statistic Description # component-count Number of unique components # contig-L50 Number of contigs that are longer than, or equal to, the N50 length # contig-N50 Contig length at which 50% of total bases in assembly are in contigs of that length or greater # contig-count Number of contigs # gc-perc gc-count/atgc-count as percentage # molecule-count Number of chromosomes and plasmids in full assembly # region-count Number of genomic regions defined in full assembly # scaffold-L50 Number of scaffolds that are longer than, or equal to, the N50 length # scaffold-N50 Scaffold length at which 50% of total bases in assembly are in scaffolds of that length or greater # scaffold-N75 Scaffold length at which 75% of total bases in assembly are in contigs of that length or greater # scaffold-N90 scaffold length at which 90% of total bases in assembly are in contigs of that length or greater # scaffold-count Number of scaffolds # spanned-gaps Number of spanned gaps. Spanned gaps are gaps within a scaffold # top-level-count Number of chromosomes or plasmids, unplaced/unlocalized scaffolds, alt-loci scaffolds, and patch scaffolds # total-gap-length Total length of gaps # total-length Total sequence length including bases and gaps # ungapped-length Total length excluding gaps # unspanned-gaps Number of unspanned gaps. Unspanned gaps are gaps between scaffolds # # Sequence-type Description # all statistic covers all the sequences in the unit-assembly and molecule(s) specified. # molecule statistic covers the specified molecule. molecule-name and molecule-type/loc will be given. # unlocalized statistic covers the sequences assigned to a molecule but with no position. molecule-name and molecule-type/loc will be given. # unplaced statistic covers the sequences not assigned to any molecule in the assembly. # # unit-name molecule-name molecule-type/loc sequence-type statistic value all all all all total-length 239052840 all all all all spanned-gaps 54 all all all all unspanned-gaps 0 all all all all region-count 0 all all all all scaffold-count 33 all all all all scaffold-N50 28898652 all all all all scaffold-L50 4 all all all all scaffold-N75 23625283 all all all all scaffold-N90 22860706 all all all all contig-count 87 all all all all contig-N50 11482534 all all all all contig-L50 7 all all all all total-gap-length 10800 all all all all molecule-count 8 all all all all top-level-count 33 all all all all component-count 33 all all all all gc-perc 37.5 Primary Assembly all all all total-length 239052840 Primary Assembly all all all ungapped-length 239042040 Primary Assembly all all all scaffold-count 33 Primary Assembly all all all scaffold-N50 28898652 Primary Assembly all all all spanned-gaps 54 Primary Assembly all all all unspanned-gaps 0 Primary Assembly all all all gc-perc 37.5 Primary Assembly all all assembled-molecule total-length 235007249 Primary Assembly all all assembled-molecule ungapped-length 234996449 Primary Assembly all all assembled-molecule scaffold-count 8 Primary Assembly all all assembled-molecule scaffold-N50 28898652 Primary Assembly all all assembled-molecule spanned-gaps 54 Primary Assembly all all assembled-molecule unspanned-gaps 0 Primary Assembly all all assembled-molecule gc-perc 37.5 Primary Assembly all all unlocalized-scaffold total-length 0 Primary Assembly all all unlocalized-scaffold ungapped-length 0 Primary Assembly all all unlocalized-scaffold scaffold-count 0 Primary Assembly all all unlocalized-scaffold scaffold-N50 0 Primary Assembly all all unlocalized-scaffold spanned-gaps 0 Primary Assembly all all unlocalized-scaffold unspanned-gaps 0 Primary Assembly na na unplaced-scaffold total-length 4045591 Primary Assembly na na unplaced-scaffold ungapped-length 4045591 Primary Assembly na na unplaced-scaffold scaffold-count 25 Primary Assembly na na unplaced-scaffold scaffold-N50 322775 Primary Assembly na na unplaced-scaffold spanned-gaps 0 Primary Assembly na na unplaced-scaffold unspanned-gaps 0 Primary Assembly na na unplaced-scaffold gc-perc 41 Primary Assembly 1 Chromosome all total-length 49444689 Primary Assembly 1 Chromosome all ungapped-length 49443489 Primary Assembly 1 Chromosome all scaffold-count 1 Primary Assembly 1 Chromosome all scaffold-N50 49444689 Primary Assembly 1 Chromosome all spanned-gaps 6 Primary Assembly 1 Chromosome all unspanned-gaps 0 Primary Assembly 1 Chromosome all gc-perc 37.5 Primary Assembly 1 Chromosome assembled-molecule total-length 49444689 Primary Assembly 1 Chromosome assembled-molecule ungapped-length 49443489 Primary Assembly 1 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 1 Chromosome assembled-molecule scaffold-N50 49444689 Primary Assembly 1 Chromosome assembled-molecule spanned-gaps 6 Primary Assembly 1 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 1 Chromosome assembled-molecule gc-perc 37.5 Primary Assembly 1 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 1 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 1 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 1 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 1 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 1 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 2 Chromosome all total-length 32391467 Primary Assembly 2 Chromosome all ungapped-length 32389867 Primary Assembly 2 Chromosome all scaffold-count 1 Primary Assembly 2 Chromosome all scaffold-N50 32391467 Primary Assembly 2 Chromosome all spanned-gaps 8 Primary Assembly 2 Chromosome all unspanned-gaps 0 Primary Assembly 2 Chromosome all gc-perc 37.5 Primary Assembly 2 Chromosome assembled-molecule total-length 32391467 Primary Assembly 2 Chromosome assembled-molecule ungapped-length 32389867 Primary Assembly 2 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 2 Chromosome assembled-molecule scaffold-N50 32391467 Primary Assembly 2 Chromosome assembled-molecule spanned-gaps 8 Primary Assembly 2 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 2 Chromosome assembled-molecule gc-perc 37.5 Primary Assembly 2 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 2 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 2 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 2 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 2 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 2 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 3 Chromosome all total-length 28898652 Primary Assembly 3 Chromosome all ungapped-length 28896052 Primary Assembly 3 Chromosome all scaffold-count 1 Primary Assembly 3 Chromosome all scaffold-N50 28898652 Primary Assembly 3 Chromosome all spanned-gaps 13 Primary Assembly 3 Chromosome all unspanned-gaps 0 Primary Assembly 3 Chromosome all gc-perc 37.5 Primary Assembly 3 Chromosome assembled-molecule total-length 28898652 Primary Assembly 3 Chromosome assembled-molecule ungapped-length 28896052 Primary Assembly 3 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 3 Chromosome assembled-molecule scaffold-N50 28898652 Primary Assembly 3 Chromosome assembled-molecule spanned-gaps 13 Primary Assembly 3 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 3 Chromosome assembled-molecule gc-perc 37.5 Primary Assembly 3 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 3 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 3 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 3 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 3 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 3 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 4 Chromosome all total-length 27074866 Primary Assembly 4 Chromosome all ungapped-length 27073266 Primary Assembly 4 Chromosome all scaffold-count 1 Primary Assembly 4 Chromosome all scaffold-N50 27074866 Primary Assembly 4 Chromosome all spanned-gaps 8 Primary Assembly 4 Chromosome all unspanned-gaps 0 Primary Assembly 4 Chromosome all gc-perc 38 Primary Assembly 4 Chromosome assembled-molecule total-length 27074866 Primary Assembly 4 Chromosome assembled-molecule ungapped-length 27073266 Primary Assembly 4 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 4 Chromosome assembled-molecule scaffold-N50 27074866 Primary Assembly 4 Chromosome assembled-molecule spanned-gaps 8 Primary Assembly 4 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 4 Chromosome assembled-molecule gc-perc 38 Primary Assembly 4 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 4 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 4 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 4 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 4 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 4 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 5 Chromosome all total-length 18727589 Primary Assembly 5 Chromosome all ungapped-length 18726589 Primary Assembly 5 Chromosome all scaffold-count 1 Primary Assembly 5 Chromosome all scaffold-N50 18727589 Primary Assembly 5 Chromosome all spanned-gaps 5 Primary Assembly 5 Chromosome all unspanned-gaps 0 Primary Assembly 5 Chromosome all gc-perc 37.5 Primary Assembly 5 Chromosome assembled-molecule total-length 18727589 Primary Assembly 5 Chromosome assembled-molecule ungapped-length 18726589 Primary Assembly 5 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 5 Chromosome assembled-molecule scaffold-N50 18727589 Primary Assembly 5 Chromosome assembled-molecule spanned-gaps 5 Primary Assembly 5 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 5 Chromosome assembled-molecule gc-perc 37.5 Primary Assembly 5 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 5 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 5 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 5 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 5 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 5 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 6 Chromosome all total-length 31983997 Primary Assembly 6 Chromosome all ungapped-length 31982997 Primary Assembly 6 Chromosome all scaffold-count 1 Primary Assembly 6 Chromosome all scaffold-N50 31983997 Primary Assembly 6 Chromosome all spanned-gaps 5 Primary Assembly 6 Chromosome all unspanned-gaps 0 Primary Assembly 6 Chromosome all gc-perc 37.5 Primary Assembly 6 Chromosome assembled-molecule total-length 31983997 Primary Assembly 6 Chromosome assembled-molecule ungapped-length 31982997 Primary Assembly 6 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 6 Chromosome assembled-molecule scaffold-N50 31983997 Primary Assembly 6 Chromosome assembled-molecule spanned-gaps 5 Primary Assembly 6 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 6 Chromosome assembled-molecule gc-perc 37.5 Primary Assembly 6 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 6 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 6 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 6 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 6 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 6 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 7 Chromosome all total-length 22860706 Primary Assembly 7 Chromosome all ungapped-length 22859906 Primary Assembly 7 Chromosome all scaffold-count 1 Primary Assembly 7 Chromosome all scaffold-N50 22860706 Primary Assembly 7 Chromosome all spanned-gaps 4 Primary Assembly 7 Chromosome all unspanned-gaps 0 Primary Assembly 7 Chromosome all gc-perc 37.5 Primary Assembly 7 Chromosome assembled-molecule total-length 22860706 Primary Assembly 7 Chromosome assembled-molecule ungapped-length 22859906 Primary Assembly 7 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 7 Chromosome assembled-molecule scaffold-N50 22860706 Primary Assembly 7 Chromosome assembled-molecule spanned-gaps 4 Primary Assembly 7 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 7 Chromosome assembled-molecule gc-perc 37.5 Primary Assembly 7 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 7 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 7 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 7 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 7 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 7 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 8 Chromosome all total-length 23625283 Primary Assembly 8 Chromosome all ungapped-length 23624283 Primary Assembly 8 Chromosome all scaffold-count 1 Primary Assembly 8 Chromosome all scaffold-N50 23625283 Primary Assembly 8 Chromosome all spanned-gaps 5 Primary Assembly 8 Chromosome all unspanned-gaps 0 Primary Assembly 8 Chromosome all gc-perc 37.5 Primary Assembly 8 Chromosome assembled-molecule total-length 23625283 Primary Assembly 8 Chromosome assembled-molecule ungapped-length 23624283 Primary Assembly 8 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 8 Chromosome assembled-molecule scaffold-N50 23625283 Primary Assembly 8 Chromosome assembled-molecule spanned-gaps 5 Primary Assembly 8 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 8 Chromosome assembled-molecule gc-perc 37.5 Primary Assembly 8 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 8 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 8 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 8 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 8 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 8 Chromosome unlocalized-scaffold unspanned-gaps 0