# Assembly name: Patl_V1 # Organism name: Pistacia atlantica (eudicots) # Isolate: c2T10 # Sex: female # Taxid: 434234 # BioSample: SAMN25601371 # BioProject: PRJNA661055 # Submitter: UC Davis Genome Center # Date: 2022-11-18 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAPEIT01 # Assembly method: 10X Supernova v. 1.1.4; Dovetail HiRise v. 7/22/2017; Shasta v. 0.1.0 # Expected final version: yes # Genome coverage: 350.0x # Sequencing technology: Illumina Hiseq (10X Chromium Library); Illumina Hiseq (Dovetail Hi-C Library); Oxford Nanopore PromethION # RefSeq category: Representative Genome # GenBank assembly accession: GCA_026229545.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_026229575.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Patl_chr1 assembled-molecule 1 Chromosome CM047897.1 <> na Primary Assembly 29014480 na Patl_chr2 assembled-molecule 2 Chromosome CM047898.1 <> na Primary Assembly 28795544 na Patl_chr3 assembled-molecule 3 Chromosome CM047899.1 <> na Primary Assembly 36184493 na Patl_chr4 assembled-molecule 4 Chromosome CM047900.1 <> na Primary Assembly 30647221 na Patl_chr5 assembled-molecule 5 Chromosome CM047901.1 <> na Primary Assembly 28194287 na Patl_chr6 assembled-molecule 6 Chromosome CM047902.1 <> na Primary Assembly 31222816 na Patl_chr7 assembled-molecule 7 Chromosome CM047903.1 <> na Primary Assembly 30702254 na Patl_chr8 assembled-molecule 8 Chromosome CM047904.1 <> na Primary Assembly 26884493 na Patl_chr9 assembled-molecule 9 Chromosome CM047905.1 <> na Primary Assembly 26052394 na Patl_chr10 assembled-molecule 10 Chromosome CM047906.1 <> na Primary Assembly 29873102 na Patl_chr11 assembled-molecule 11 Chromosome CM047907.1 <> na Primary Assembly 27202441 na Patl_chr12 assembled-molecule 12 Chromosome CM047908.1 <> na Primary Assembly 46322290 na Patl_chr13 assembled-molecule 13 Chromosome CM047909.1 <> na Primary Assembly 32119832 na Patl_chr15 assembled-molecule 15 Chromosome CM047910.1 <> na Primary Assembly 29993599 na Patl_chr14.1 unlocalized-scaffold 14 Chromosome JAPEIT010000014.1 <> na Primary Assembly 38842267 na Patl_chr14.2 unlocalized-scaffold 14 Chromosome JAPEIT010000015.1 <> na Primary Assembly 26542883 na Patl_Unanchored_1 unplaced-scaffold na na JAPEIT010000017.1 <> na Primary Assembly 1150 na Patl_Unanchored_10 unplaced-scaffold na na JAPEIT010000026.1 <> na Primary Assembly 9608 na Patl_Unanchored_11 unplaced-scaffold na na JAPEIT010000027.1 <> na Primary Assembly 2602 na Patl_Unanchored_12 unplaced-scaffold na na JAPEIT010000028.1 <> na Primary Assembly 1178 na Patl_Unanchored_13 unplaced-scaffold na na JAPEIT010000029.1 <> na Primary Assembly 455402 na Patl_Unanchored_14 unplaced-scaffold na na JAPEIT010000030.1 <> na Primary Assembly 1108 na Patl_Unanchored_15 unplaced-scaffold na na JAPEIT010000031.1 <> na Primary Assembly 89418 na Patl_Unanchored_16 unplaced-scaffold na na JAPEIT010000032.1 <> na Primary Assembly 167383 na Patl_Unanchored_17 unplaced-scaffold na na JAPEIT010000033.1 <> na Primary Assembly 9828 na Patl_Unanchored_18 unplaced-scaffold na na JAPEIT010000034.1 <> na Primary Assembly 38432 na Patl_Unanchored_19 unplaced-scaffold na na JAPEIT010000035.1 <> na Primary Assembly 76695 na Patl_Unanchored_2 unplaced-scaffold na na JAPEIT010000018.1 <> na Primary Assembly 2256 na Patl_Unanchored_20 unplaced-scaffold na na JAPEIT010000036.1 <> na Primary Assembly 71726 na Patl_Unanchored_21 unplaced-scaffold na na JAPEIT010000037.1 <> na Primary Assembly 115511 na Patl_Unanchored_22 unplaced-scaffold na na JAPEIT010000038.1 <> na Primary Assembly 102192 na Patl_Unanchored_23 unplaced-scaffold na na JAPEIT010000039.1 <> na Primary Assembly 27175 na Patl_Unanchored_24 unplaced-scaffold na na JAPEIT010000040.1 <> na Primary Assembly 129000 na Patl_Unanchored_25 unplaced-scaffold na na JAPEIT010000041.1 <> na Primary Assembly 10842 na Patl_Unanchored_26 unplaced-scaffold na na JAPEIT010000042.1 <> na Primary Assembly 1988 na Patl_Unanchored_27 unplaced-scaffold na na JAPEIT010000043.1 <> na Primary Assembly 210897 na Patl_Unanchored_28 unplaced-scaffold na na JAPEIT010000044.1 <> na Primary Assembly 81255 na Patl_Unanchored_29 unplaced-scaffold na na JAPEIT010000045.1 <> na Primary Assembly 39993 na Patl_Unanchored_3 unplaced-scaffold na na JAPEIT010000019.1 <> na Primary Assembly 6515 na Patl_Unanchored_30 unplaced-scaffold na na JAPEIT010000046.1 <> na Primary Assembly 77488 na Patl_Unanchored_31 unplaced-scaffold na na JAPEIT010000047.1 <> na Primary Assembly 22676 na Patl_Unanchored_32 unplaced-scaffold na na JAPEIT010000048.1 <> na Primary Assembly 28097 na Patl_Unanchored_33 unplaced-scaffold na na JAPEIT010000049.1 <> na Primary Assembly 1203 na Patl_Unanchored_34 unplaced-scaffold na na JAPEIT010000050.1 <> na Primary Assembly 2144 na Patl_Unanchored_35 unplaced-scaffold na na JAPEIT010000051.1 <> na Primary Assembly 95258 na Patl_Unanchored_36 unplaced-scaffold na na JAPEIT010000052.1 <> na Primary Assembly 76098 na Patl_Unanchored_37 unplaced-scaffold na na JAPEIT010000053.1 <> na Primary Assembly 157310 na Patl_Unanchored_38 unplaced-scaffold na na JAPEIT010000054.1 <> na Primary Assembly 1670 na Patl_Unanchored_39 unplaced-scaffold na na JAPEIT010000055.1 <> na Primary Assembly 152736 na Patl_Unanchored_4 unplaced-scaffold na na JAPEIT010000020.1 <> na Primary Assembly 60502 na Patl_Unanchored_40 unplaced-scaffold na na JAPEIT010000056.1 <> na Primary Assembly 3223 na Patl_Unanchored_41 unplaced-scaffold na na JAPEIT010000057.1 <> na Primary Assembly 129998 na Patl_Unanchored_42 unplaced-scaffold na na JAPEIT010000058.1 <> na Primary Assembly 16330 na Patl_Unanchored_43 unplaced-scaffold na na JAPEIT010000059.1 <> na Primary Assembly 37710 na Patl_Unanchored_44 unplaced-scaffold na na JAPEIT010000060.1 <> na Primary Assembly 79174 na Patl_Unanchored_45 unplaced-scaffold na na JAPEIT010000061.1 <> na Primary Assembly 139969 na Patl_Unanchored_46 unplaced-scaffold na na JAPEIT010000062.1 <> na Primary Assembly 1008 na Patl_Unanchored_47 unplaced-scaffold na na JAPEIT010000063.1 <> na Primary Assembly 20447 na Patl_Unanchored_48 unplaced-scaffold na na JAPEIT010000064.1 <> na Primary Assembly 21950 na Patl_Unanchored_49 unplaced-scaffold na na JAPEIT010000065.1 <> na Primary Assembly 38886 na Patl_Unanchored_5 unplaced-scaffold na na JAPEIT010000021.1 <> na Primary Assembly 57937 na Patl_Unanchored_50 unplaced-scaffold na na JAPEIT010000066.1 <> na Primary Assembly 1136 na Patl_Unanchored_51 unplaced-scaffold na na JAPEIT010000067.1 <> na Primary Assembly 111062 na Patl_Unanchored_52 unplaced-scaffold na na JAPEIT010000068.1 <> na Primary Assembly 18210 na Patl_Unanchored_53 unplaced-scaffold na na JAPEIT010000069.1 <> na Primary Assembly 3787 na Patl_Unanchored_54 unplaced-scaffold na na JAPEIT010000070.1 <> na Primary Assembly 41418 na Patl_Unanchored_55 unplaced-scaffold na na JAPEIT010000071.1 <> na Primary Assembly 1055 na Patl_Unanchored_56 unplaced-scaffold na na JAPEIT010000072.1 <> na Primary Assembly 6865 na Patl_Unanchored_57 unplaced-scaffold na na JAPEIT010000073.1 <> na Primary Assembly 93476 na Patl_Unanchored_58 unplaced-scaffold na na JAPEIT010000074.1 <> na Primary Assembly 2402 na Patl_Unanchored_59 unplaced-scaffold na na JAPEIT010000075.1 <> na Primary Assembly 85177 na Patl_Unanchored_6 unplaced-scaffold na na JAPEIT010000022.1 <> na Primary Assembly 88509 na Patl_Unanchored_60 unplaced-scaffold na na JAPEIT010000076.1 <> na Primary Assembly 94873 na Patl_Unanchored_61 unplaced-scaffold na na JAPEIT010000077.1 <> na Primary Assembly 1986 na Patl_Unanchored_62 unplaced-scaffold na na JAPEIT010000078.1 <> na Primary Assembly 7340 na Patl_Unanchored_63 unplaced-scaffold na na JAPEIT010000079.1 <> na Primary Assembly 17890 na Patl_Unanchored_64 unplaced-scaffold na na JAPEIT010000080.1 <> na Primary Assembly 2290 na Patl_Unanchored_65 unplaced-scaffold na na JAPEIT010000081.1 <> na Primary Assembly 1624 na Patl_Unanchored_66 unplaced-scaffold na na JAPEIT010000082.1 <> na Primary Assembly 1139 na Patl_Unanchored_67 unplaced-scaffold na na JAPEIT010000083.1 <> na Primary Assembly 65979 na Patl_Unanchored_68 unplaced-scaffold na na JAPEIT010000084.1 <> na Primary Assembly 14191 na Patl_Unanchored_69 unplaced-scaffold na na JAPEIT010000085.1 <> na Primary Assembly 13899 na Patl_Unanchored_7 unplaced-scaffold na na JAPEIT010000023.1 <> na Primary Assembly 6371 na Patl_Unanchored_70 unplaced-scaffold na na JAPEIT010000086.1 <> na Primary Assembly 1372 na Patl_Unanchored_71 unplaced-scaffold na na JAPEIT010000087.1 <> na Primary Assembly 1081 na Patl_Unanchored_72 unplaced-scaffold na na JAPEIT010000088.1 <> na Primary Assembly 2562 na Patl_Unanchored_73 unplaced-scaffold na na JAPEIT010000089.1 <> na Primary Assembly 2011 na Patl_Unanchored_74 unplaced-scaffold na na JAPEIT010000090.1 <> na Primary Assembly 5405 na Patl_Unanchored_75 unplaced-scaffold na na JAPEIT010000091.1 <> na Primary Assembly 2255 na Patl_Unanchored_76 unplaced-scaffold na na JAPEIT010000092.1 <> na Primary Assembly 54128 na Patl_Unanchored_77 unplaced-scaffold na na JAPEIT010000093.1 <> na Primary Assembly 28136 na Patl_Unanchored_78 unplaced-scaffold na na JAPEIT010000094.1 <> na Primary Assembly 48442 na Patl_Unanchored_79 unplaced-scaffold na na JAPEIT010000095.1 <> na Primary Assembly 78221 na Patl_Unanchored_8 unplaced-scaffold na na JAPEIT010000024.1 <> na Primary Assembly 120745 na Patl_Unanchored_80 unplaced-scaffold na na JAPEIT010000096.1 <> na Primary Assembly 16697 na Patl_Unanchored_81 unplaced-scaffold na na JAPEIT010000097.1 <> na Primary Assembly 21658 na Patl_Unanchored_82 unplaced-scaffold na na JAPEIT010000098.1 <> na Primary Assembly 97893 na Patl_Unanchored_83 unplaced-scaffold na na JAPEIT010000099.1 <> na Primary Assembly 29682 na Patl_Unanchored_84 unplaced-scaffold na na JAPEIT010000100.1 <> na Primary Assembly 303221 na Patl_Unanchored_85 unplaced-scaffold na na JAPEIT010000101.1 <> na Primary Assembly 275200 na Patl_Unanchored_86 unplaced-scaffold na na JAPEIT010000102.1 <> na Primary Assembly 3124 na Patl_Unanchored_87 unplaced-scaffold na na JAPEIT010000103.1 <> na Primary Assembly 150628 na Patl_Unanchored_88 unplaced-scaffold na na JAPEIT010000104.1 <> na Primary Assembly 179269 na Patl_Unanchored_89 unplaced-scaffold na na JAPEIT010000105.1 <> na Primary Assembly 23406 na Patl_Unanchored_9 unplaced-scaffold na na JAPEIT010000025.1 <> na Primary Assembly 2759 na Patl_Unanchored_90 unplaced-scaffold na na JAPEIT010000106.1 <> na Primary Assembly 39384 na Patl_Unanchored_91 unplaced-scaffold na na JAPEIT010000107.1 <> na Primary Assembly 48194 na Patl_Unanchored_92 unplaced-scaffold na na JAPEIT010000108.1 <> na Primary Assembly 35086 na Patl_Unanchored_93 unplaced-scaffold na na JAPEIT010000109.1 <> na Primary Assembly 46738 na Patl_Unanchored_94 unplaced-scaffold na na JAPEIT010000110.1 <> na Primary Assembly 24826 na Patl_Unanchored_95 unplaced-scaffold na na JAPEIT010000111.1 <> na Primary Assembly 221413 na Patl_Unanchored_96 unplaced-scaffold na na JAPEIT010000112.1 <> na Primary Assembly 781426 na Patl_Unanchored_97 unplaced-scaffold na na JAPEIT010000113.1 <> na Primary Assembly 487566 na