# Assembly Statistics Report # Assembly name: SDNU_Libico_1.0 # Organism name: Limonium bicolor (eudicots) # Isolate: LB-2021 # Taxid: 293754 # BioSample: SAMN20691661 # BioProject: PRJNA753199 # Submitter: Shandong Normal University # Date: 2022-05-16 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAIOTZ01 # Assembly method: FALCON v. Sep-2019 # Expected final version: yes # Genome coverage: 117.0x # Sequencing technology: PacBio Sequel; Illumina HiSeq # RefSeq category: Representative Genome # GenBank assembly accession: GCA_023374045.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_023375195.1 Primary Assembly # # Statistic Types # Statistic Description # component-count Number of unique components # contig-L50 Number of contigs that are longer than, or equal to, the N50 length # contig-N50 Contig length at which 50% of total bases in assembly are in contigs of that length or greater # contig-count Number of contigs # gc-perc gc-count/atgc-count as percentage # molecule-count Number of chromosomes and plasmids in full assembly # region-count Number of genomic regions defined in full assembly # scaffold-L50 Number of scaffolds that are longer than, or equal to, the N50 length # scaffold-N50 Scaffold length at which 50% of total bases in assembly are in scaffolds of that length or greater # scaffold-N75 Scaffold length at which 75% of total bases in assembly are in contigs of that length or greater # scaffold-N90 scaffold length at which 90% of total bases in assembly are in contigs of that length or greater # scaffold-count Number of scaffolds # spanned-gaps Number of spanned gaps. Spanned gaps are gaps within a scaffold # top-level-count Number of chromosomes or plasmids, unplaced/unlocalized scaffolds, alt-loci scaffolds, and patch scaffolds # total-gap-length Total length of gaps # total-length Total sequence length including bases and gaps # ungapped-length Total length excluding gaps # unspanned-gaps Number of unspanned gaps. Unspanned gaps are gaps between scaffolds # # Sequence-type Description # all statistic covers all the sequences in the unit-assembly and molecule(s) specified. # molecule statistic covers the specified molecule. molecule-name and molecule-type/loc will be given. # unlocalized statistic covers the sequences assigned to a molecule but with no position. molecule-name and molecule-type/loc will be given. # unplaced statistic covers the sequences not assigned to any molecule in the assembly. # # unit-name molecule-name molecule-type/loc sequence-type statistic value all all all all total-length 2925439704 all all all all spanned-gaps 9441 all all all all unspanned-gaps 0 all all all all region-count 0 all all all all scaffold-count 2822 all all all all scaffold-N50 340376713 all all all all scaffold-L50 4 all all all all scaffold-N75 296164000 all all all all scaffold-N90 293096167 all all all all contig-count 12263 all all all all contig-N50 570071 all all all all contig-L50 1434 all all all all total-gap-length 4720500 all all all all molecule-count 8 all all all all top-level-count 2822 all all all all component-count 2822 all all all all gc-perc 39 Primary Assembly all all all total-length 2925439704 Primary Assembly all all all ungapped-length 2920719204 Primary Assembly all all all scaffold-count 2822 Primary Assembly all all all scaffold-N50 340376713 Primary Assembly all all all spanned-gaps 9441 Primary Assembly all all all unspanned-gaps 0 Primary Assembly all all all gc-perc 39 Primary Assembly all all assembled-molecule total-length 2820101987 Primary Assembly all all assembled-molecule ungapped-length 2815382487 Primary Assembly all all assembled-molecule scaffold-count 8 Primary Assembly all all assembled-molecule scaffold-N50 405402131 Primary Assembly all all assembled-molecule spanned-gaps 9439 Primary Assembly all all assembled-molecule unspanned-gaps 0 Primary Assembly all all assembled-molecule gc-perc 39 Primary Assembly all all unlocalized-scaffold total-length 0 Primary Assembly all all unlocalized-scaffold ungapped-length 0 Primary Assembly all all unlocalized-scaffold scaffold-count 0 Primary Assembly all all unlocalized-scaffold scaffold-N50 0 Primary Assembly all all unlocalized-scaffold spanned-gaps 0 Primary Assembly all all unlocalized-scaffold unspanned-gaps 0 Primary Assembly na na unplaced-scaffold total-length 105337717 Primary Assembly na na unplaced-scaffold ungapped-length 105336717 Primary Assembly na na unplaced-scaffold scaffold-count 2814 Primary Assembly na na unplaced-scaffold scaffold-N50 43221 Primary Assembly na na unplaced-scaffold spanned-gaps 2 Primary Assembly na na unplaced-scaffold unspanned-gaps 0 Primary Assembly na na unplaced-scaffold gc-perc 39 Primary Assembly 1 Chromosome all total-length 540335061 Primary Assembly 1 Chromosome all ungapped-length 539527061 Primary Assembly 1 Chromosome all scaffold-count 1 Primary Assembly 1 Chromosome all scaffold-N50 540335061 Primary Assembly 1 Chromosome all spanned-gaps 1616 Primary Assembly 1 Chromosome all unspanned-gaps 0 Primary Assembly 1 Chromosome all gc-perc 39 Primary Assembly 1 Chromosome assembled-molecule total-length 540335061 Primary Assembly 1 Chromosome assembled-molecule ungapped-length 539527061 Primary Assembly 1 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 1 Chromosome assembled-molecule scaffold-N50 540335061 Primary Assembly 1 Chromosome assembled-molecule spanned-gaps 1616 Primary Assembly 1 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 1 Chromosome assembled-molecule gc-perc 39 Primary Assembly 1 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 1 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 1 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 1 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 1 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 1 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 2 Chromosome all total-length 493563385 Primary Assembly 2 Chromosome all ungapped-length 492779385 Primary Assembly 2 Chromosome all scaffold-count 1 Primary Assembly 2 Chromosome all scaffold-N50 493563385 Primary Assembly 2 Chromosome all spanned-gaps 1568 Primary Assembly 2 Chromosome all unspanned-gaps 0 Primary Assembly 2 Chromosome all gc-perc 39 Primary Assembly 2 Chromosome assembled-molecule total-length 493563385 Primary Assembly 2 Chromosome assembled-molecule ungapped-length 492779385 Primary Assembly 2 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 2 Chromosome assembled-molecule scaffold-N50 493563385 Primary Assembly 2 Chromosome assembled-molecule spanned-gaps 1568 Primary Assembly 2 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 2 Chromosome assembled-molecule gc-perc 39 Primary Assembly 2 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 2 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 2 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 2 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 2 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 2 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 3 Chromosome all total-length 405402131 Primary Assembly 3 Chromosome all ungapped-length 404640631 Primary Assembly 3 Chromosome all scaffold-count 1 Primary Assembly 3 Chromosome all scaffold-N50 405402131 Primary Assembly 3 Chromosome all spanned-gaps 1523 Primary Assembly 3 Chromosome all unspanned-gaps 0 Primary Assembly 3 Chromosome all gc-perc 39 Primary Assembly 3 Chromosome assembled-molecule total-length 405402131 Primary Assembly 3 Chromosome assembled-molecule ungapped-length 404640631 Primary Assembly 3 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 3 Chromosome assembled-molecule scaffold-N50 405402131 Primary Assembly 3 Chromosome assembled-molecule spanned-gaps 1523 Primary Assembly 3 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 3 Chromosome assembled-molecule gc-perc 39 Primary Assembly 3 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 3 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 3 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 3 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 3 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 3 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 4 Chromosome all total-length 340376713 Primary Assembly 4 Chromosome all ungapped-length 339787213 Primary Assembly 4 Chromosome all scaffold-count 1 Primary Assembly 4 Chromosome all scaffold-N50 340376713 Primary Assembly 4 Chromosome all spanned-gaps 1179 Primary Assembly 4 Chromosome all unspanned-gaps 0 Primary Assembly 4 Chromosome all gc-perc 39 Primary Assembly 4 Chromosome assembled-molecule total-length 340376713 Primary Assembly 4 Chromosome assembled-molecule ungapped-length 339787213 Primary Assembly 4 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 4 Chromosome assembled-molecule scaffold-N50 340376713 Primary Assembly 4 Chromosome assembled-molecule spanned-gaps 1179 Primary Assembly 4 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 4 Chromosome assembled-molecule gc-perc 39 Primary Assembly 4 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 4 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 4 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 4 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 4 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 4 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 5 Chromosome all total-length 315092672 Primary Assembly 5 Chromosome all ungapped-length 314569672 Primary Assembly 5 Chromosome all scaffold-count 1 Primary Assembly 5 Chromosome all scaffold-N50 315092672 Primary Assembly 5 Chromosome all spanned-gaps 1046 Primary Assembly 5 Chromosome all unspanned-gaps 0 Primary Assembly 5 Chromosome all gc-perc 39.5 Primary Assembly 5 Chromosome assembled-molecule total-length 315092672 Primary Assembly 5 Chromosome assembled-molecule ungapped-length 314569672 Primary Assembly 5 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 5 Chromosome assembled-molecule scaffold-N50 315092672 Primary Assembly 5 Chromosome assembled-molecule spanned-gaps 1046 Primary Assembly 5 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 5 Chromosome assembled-molecule gc-perc 39.5 Primary Assembly 5 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 5 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 5 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 5 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 5 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 5 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 6 Chromosome all total-length 296164000 Primary Assembly 6 Chromosome all ungapped-length 295669500 Primary Assembly 6 Chromosome all scaffold-count 1 Primary Assembly 6 Chromosome all scaffold-N50 296164000 Primary Assembly 6 Chromosome all spanned-gaps 989 Primary Assembly 6 Chromosome all unspanned-gaps 0 Primary Assembly 6 Chromosome all gc-perc 39.5 Primary Assembly 6 Chromosome assembled-molecule total-length 296164000 Primary Assembly 6 Chromosome assembled-molecule ungapped-length 295669500 Primary Assembly 6 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 6 Chromosome assembled-molecule scaffold-N50 296164000 Primary Assembly 6 Chromosome assembled-molecule spanned-gaps 989 Primary Assembly 6 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 6 Chromosome assembled-molecule gc-perc 39.5 Primary Assembly 6 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 6 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 6 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 6 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 6 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 6 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 7 Chromosome all total-length 293096167 Primary Assembly 7 Chromosome all ungapped-length 292609667 Primary Assembly 7 Chromosome all scaffold-count 1 Primary Assembly 7 Chromosome all scaffold-N50 293096167 Primary Assembly 7 Chromosome all spanned-gaps 973 Primary Assembly 7 Chromosome all unspanned-gaps 0 Primary Assembly 7 Chromosome all gc-perc 39.5 Primary Assembly 7 Chromosome assembled-molecule total-length 293096167 Primary Assembly 7 Chromosome assembled-molecule ungapped-length 292609667 Primary Assembly 7 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 7 Chromosome assembled-molecule scaffold-N50 293096167 Primary Assembly 7 Chromosome assembled-molecule spanned-gaps 973 Primary Assembly 7 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 7 Chromosome assembled-molecule gc-perc 39.5 Primary Assembly 7 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 7 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 7 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 7 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 7 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 7 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 8 Chromosome all total-length 136071858 Primary Assembly 8 Chromosome all ungapped-length 135799358 Primary Assembly 8 Chromosome all scaffold-count 1 Primary Assembly 8 Chromosome all scaffold-N50 136071858 Primary Assembly 8 Chromosome all spanned-gaps 545 Primary Assembly 8 Chromosome all unspanned-gaps 0 Primary Assembly 8 Chromosome all gc-perc 39.5 Primary Assembly 8 Chromosome assembled-molecule total-length 136071858 Primary Assembly 8 Chromosome assembled-molecule ungapped-length 135799358 Primary Assembly 8 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 8 Chromosome assembled-molecule scaffold-N50 136071858 Primary Assembly 8 Chromosome assembled-molecule spanned-gaps 545 Primary Assembly 8 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 8 Chromosome assembled-molecule gc-perc 39.5 Primary Assembly 8 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 8 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 8 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 8 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 8 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 8 Chromosome unlocalized-scaffold unspanned-gaps 0