# Assembly Statistics Report # Assembly name: ASM1810575v1 # Organism name: Bretschneidera sinensis (eudicots) # Isolate: BLS-GD # Taxid: 28529 # BioSample: SAMN16095328 # BioProject: PRJNA662820 # Submitter: South China Botanical Garden, Chinese Academy of Sciences # Date: 2021-04-23 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JACXJD01 # Assembly method: hifiasm v. 0.11-r302; 3d-dna v. 180922; scaffhic v. 1.1; pseudohaploid v. AUG-2020; misjoindetect v. AUG-2020 # Expected final version: yes # Genome coverage: 20.0x # Sequencing technology: Pacbio hifi # GenBank assembly accession: GCA_018105755.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_018105765.1 Primary Assembly # # Statistic Types # Statistic Description # component-count Number of unique components # contig-L50 Number of contigs that are longer than, or equal to, the N50 length # contig-N50 Contig length at which 50% of total bases in assembly are in contigs of that length or greater # contig-count Number of contigs # gc-perc gc-count/atgc-count as percentage # molecule-count Number of chromosomes and plasmids in full assembly # region-count Number of genomic regions defined in full assembly # scaffold-L50 Number of scaffolds that are longer than, or equal to, the N50 length # scaffold-N50 Scaffold length at which 50% of total bases in assembly are in scaffolds of that length or greater # scaffold-N75 Scaffold length at which 75% of total bases in assembly are in contigs of that length or greater # scaffold-N90 scaffold length at which 90% of total bases in assembly are in contigs of that length or greater # scaffold-count Number of scaffolds # spanned-gaps Number of spanned gaps. Spanned gaps are gaps within a scaffold # top-level-count Number of chromosomes or plasmids, unplaced/unlocalized scaffolds, alt-loci scaffolds, and patch scaffolds # total-gap-length Total length of gaps # total-length Total sequence length including bases and gaps # ungapped-length Total length excluding gaps # unspanned-gaps Number of unspanned gaps. Unspanned gaps are gaps between scaffolds # # Sequence-type Description # all statistic covers all the sequences in the unit-assembly and molecule(s) specified. # molecule statistic covers the specified molecule. molecule-name and molecule-type/loc will be given. # unlocalized statistic covers the sequences assigned to a molecule but with no position. molecule-name and molecule-type/loc will be given. # unplaced statistic covers the sequences not assigned to any molecule in the assembly. # # unit-name molecule-name molecule-type/loc sequence-type statistic value all all all all total-length 1170884685 all all all all spanned-gaps 164 all all all all unspanned-gaps 0 all all all all region-count 0 all all all all scaffold-count 1621 all all all all scaffold-N50 140467444 all all all all scaffold-L50 4 all all all all scaffold-N75 102104410 all all all all scaffold-N90 87593448 all all all all contig-count 1785 all all all all contig-N50 29966244 all all all all contig-L50 14 all all all all total-gap-length 71311 all all all all molecule-count 9 all all all all top-level-count 1621 all all all all component-count 1621 all all all all gc-perc 36 Primary Assembly all all all total-length 1170884685 Primary Assembly all all all ungapped-length 1170813374 Primary Assembly all all all scaffold-count 1621 Primary Assembly all all all scaffold-N50 140467444 Primary Assembly all all all spanned-gaps 164 Primary Assembly all all all unspanned-gaps 0 Primary Assembly all all all gc-perc 36 Primary Assembly all all assembled-molecule total-length 1120988409 Primary Assembly all all assembled-molecule ungapped-length 1120929620 Primary Assembly all all assembled-molecule scaffold-count 9 Primary Assembly all all assembled-molecule scaffold-N50 140467444 Primary Assembly all all assembled-molecule spanned-gaps 133 Primary Assembly all all assembled-molecule unspanned-gaps 0 Primary Assembly all all assembled-molecule gc-perc 35.5 Primary Assembly all all unlocalized-scaffold total-length 0 Primary Assembly all all unlocalized-scaffold ungapped-length 0 Primary Assembly all all unlocalized-scaffold scaffold-count 0 Primary Assembly all all unlocalized-scaffold scaffold-N50 0 Primary Assembly all all unlocalized-scaffold spanned-gaps 0 Primary Assembly all all unlocalized-scaffold unspanned-gaps 0 Primary Assembly na na unplaced-scaffold total-length 49896276 Primary Assembly na na unplaced-scaffold ungapped-length 49883754 Primary Assembly na na unplaced-scaffold scaffold-count 1612 Primary Assembly na na unplaced-scaffold scaffold-N50 52167 Primary Assembly na na unplaced-scaffold spanned-gaps 31 Primary Assembly na na unplaced-scaffold unspanned-gaps 0 Primary Assembly na na unplaced-scaffold gc-perc 37.5 Primary Assembly 1 Chromosome all total-length 152689475 Primary Assembly 1 Chromosome all ungapped-length 152681475 Primary Assembly 1 Chromosome all scaffold-count 1 Primary Assembly 1 Chromosome all scaffold-N50 152689475 Primary Assembly 1 Chromosome all spanned-gaps 16 Primary Assembly 1 Chromosome all unspanned-gaps 0 Primary Assembly 1 Chromosome all gc-perc 35.5 Primary Assembly 1 Chromosome assembled-molecule total-length 152689475 Primary Assembly 1 Chromosome assembled-molecule ungapped-length 152681475 Primary Assembly 1 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 1 Chromosome assembled-molecule scaffold-N50 152689475 Primary Assembly 1 Chromosome assembled-molecule spanned-gaps 16 Primary Assembly 1 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 1 Chromosome assembled-molecule gc-perc 35.5 Primary Assembly 1 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 1 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 1 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 1 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 1 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 1 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 2 Chromosome all total-length 151999468 Primary Assembly 2 Chromosome all ungapped-length 151987975 Primary Assembly 2 Chromosome all scaffold-count 1 Primary Assembly 2 Chromosome all scaffold-N50 151999468 Primary Assembly 2 Chromosome all spanned-gaps 29 Primary Assembly 2 Chromosome all unspanned-gaps 0 Primary Assembly 2 Chromosome all gc-perc 35.5 Primary Assembly 2 Chromosome assembled-molecule total-length 151999468 Primary Assembly 2 Chromosome assembled-molecule ungapped-length 151987975 Primary Assembly 2 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 2 Chromosome assembled-molecule scaffold-N50 151999468 Primary Assembly 2 Chromosome assembled-molecule spanned-gaps 29 Primary Assembly 2 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 2 Chromosome assembled-molecule gc-perc 35.5 Primary Assembly 2 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 2 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 2 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 2 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 2 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 2 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 3 Chromosome all total-length 144368824 Primary Assembly 3 Chromosome all ungapped-length 144358742 Primary Assembly 3 Chromosome all scaffold-count 1 Primary Assembly 3 Chromosome all scaffold-N50 144368824 Primary Assembly 3 Chromosome all spanned-gaps 23 Primary Assembly 3 Chromosome all unspanned-gaps 0 Primary Assembly 3 Chromosome all gc-perc 35.5 Primary Assembly 3 Chromosome assembled-molecule total-length 144368824 Primary Assembly 3 Chromosome assembled-molecule ungapped-length 144358742 Primary Assembly 3 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 3 Chromosome assembled-molecule scaffold-N50 144368824 Primary Assembly 3 Chromosome assembled-molecule spanned-gaps 23 Primary Assembly 3 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 3 Chromosome assembled-molecule gc-perc 35.5 Primary Assembly 3 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 3 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 3 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 3 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 3 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 3 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 4 Chromosome all total-length 140467444 Primary Assembly 4 Chromosome all ungapped-length 140463749 Primary Assembly 4 Chromosome all scaffold-count 1 Primary Assembly 4 Chromosome all scaffold-N50 140467444 Primary Assembly 4 Chromosome all spanned-gaps 8 Primary Assembly 4 Chromosome all unspanned-gaps 0 Primary Assembly 4 Chromosome all gc-perc 35.5 Primary Assembly 4 Chromosome assembled-molecule total-length 140467444 Primary Assembly 4 Chromosome assembled-molecule ungapped-length 140463749 Primary Assembly 4 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 4 Chromosome assembled-molecule scaffold-N50 140467444 Primary Assembly 4 Chromosome assembled-molecule spanned-gaps 8 Primary Assembly 4 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 4 Chromosome assembled-molecule gc-perc 35.5 Primary Assembly 4 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 4 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 4 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 4 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 4 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 4 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 5 Chromosome all total-length 137464959 Primary Assembly 5 Chromosome all ungapped-length 137456692 Primary Assembly 5 Chromosome all scaffold-count 1 Primary Assembly 5 Chromosome all scaffold-N50 137464959 Primary Assembly 5 Chromosome all spanned-gaps 19 Primary Assembly 5 Chromosome all unspanned-gaps 0 Primary Assembly 5 Chromosome all gc-perc 35.5 Primary Assembly 5 Chromosome assembled-molecule total-length 137464959 Primary Assembly 5 Chromosome assembled-molecule ungapped-length 137456692 Primary Assembly 5 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 5 Chromosome assembled-molecule scaffold-N50 137464959 Primary Assembly 5 Chromosome assembled-molecule spanned-gaps 19 Primary Assembly 5 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 5 Chromosome assembled-molecule gc-perc 35.5 Primary Assembly 5 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 5 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 5 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 5 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 5 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 5 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 6 Chromosome all total-length 103046003 Primary Assembly 6 Chromosome all ungapped-length 103036719 Primary Assembly 6 Chromosome all scaffold-count 1 Primary Assembly 6 Chromosome all scaffold-N50 103046003 Primary Assembly 6 Chromosome all spanned-gaps 21 Primary Assembly 6 Chromosome all unspanned-gaps 0 Primary Assembly 6 Chromosome all gc-perc 36 Primary Assembly 6 Chromosome assembled-molecule total-length 103046003 Primary Assembly 6 Chromosome assembled-molecule ungapped-length 103036719 Primary Assembly 6 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 6 Chromosome assembled-molecule scaffold-N50 103046003 Primary Assembly 6 Chromosome assembled-molecule spanned-gaps 21 Primary Assembly 6 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 6 Chromosome assembled-molecule gc-perc 36 Primary Assembly 6 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 6 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 6 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 6 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 6 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 6 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 7 Chromosome all total-length 102104410 Primary Assembly 7 Chromosome all ungapped-length 102101942 Primary Assembly 7 Chromosome all scaffold-count 1 Primary Assembly 7 Chromosome all scaffold-N50 102104410 Primary Assembly 7 Chromosome all spanned-gaps 6 Primary Assembly 7 Chromosome all unspanned-gaps 0 Primary Assembly 7 Chromosome all gc-perc 36 Primary Assembly 7 Chromosome assembled-molecule total-length 102104410 Primary Assembly 7 Chromosome assembled-molecule ungapped-length 102101942 Primary Assembly 7 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 7 Chromosome assembled-molecule scaffold-N50 102104410 Primary Assembly 7 Chromosome assembled-molecule spanned-gaps 6 Primary Assembly 7 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 7 Chromosome assembled-molecule gc-perc 36 Primary Assembly 7 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 7 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 7 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 7 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 7 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 7 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 8 Chromosome all total-length 101254378 Primary Assembly 8 Chromosome all ungapped-length 101250878 Primary Assembly 8 Chromosome all scaffold-count 1 Primary Assembly 8 Chromosome all scaffold-N50 101254378 Primary Assembly 8 Chromosome all spanned-gaps 7 Primary Assembly 8 Chromosome all unspanned-gaps 0 Primary Assembly 8 Chromosome all gc-perc 36 Primary Assembly 8 Chromosome assembled-molecule total-length 101254378 Primary Assembly 8 Chromosome assembled-molecule ungapped-length 101250878 Primary Assembly 8 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 8 Chromosome assembled-molecule scaffold-N50 101254378 Primary Assembly 8 Chromosome assembled-molecule spanned-gaps 7 Primary Assembly 8 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 8 Chromosome assembled-molecule gc-perc 36 Primary Assembly 8 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 8 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 8 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 8 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 8 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 8 Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 9 Chromosome all total-length 87593448 Primary Assembly 9 Chromosome all ungapped-length 87591448 Primary Assembly 9 Chromosome all scaffold-count 1 Primary Assembly 9 Chromosome all scaffold-N50 87593448 Primary Assembly 9 Chromosome all spanned-gaps 4 Primary Assembly 9 Chromosome all unspanned-gaps 0 Primary Assembly 9 Chromosome all gc-perc 36 Primary Assembly 9 Chromosome assembled-molecule total-length 87593448 Primary Assembly 9 Chromosome assembled-molecule ungapped-length 87591448 Primary Assembly 9 Chromosome assembled-molecule scaffold-count 1 Primary Assembly 9 Chromosome assembled-molecule scaffold-N50 87593448 Primary Assembly 9 Chromosome assembled-molecule spanned-gaps 4 Primary Assembly 9 Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 9 Chromosome assembled-molecule gc-perc 36 Primary Assembly 9 Chromosome unlocalized-scaffold total-length 0 Primary Assembly 9 Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 9 Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 9 Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 9 Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 9 Chromosome unlocalized-scaffold unspanned-gaps 0