# Assembly Statistics Report # Assembly name: Astre_guber_v1.0 # Organism name: Astrephomene gubernaculifera (green algae) # Isolate: NIES-4017 # Taxid: 47775 # BioSample: SAMD00236769 # BioProject: PRJDB10253 # Submitter: Department of Biological Sciences, Graduate School of Science, The University of Tokyo # Date: 2021-11-19 # Assembly type: haploid # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: BMAR01 # Assembly method: Falcon v. 0.7; Falcon_Unzip v. 0.4; SMRT Link v. 6.0.0.47841; Pilon v. 1.22 # Genome coverage: 380x # Sequencing technology: Illumina HiSeq 2500; Sequel # RefSeq category: Representative Genome # GenBank assembly accession: GCA_021605115.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_021605125.1 Primary Assembly ## GCA_021605135.1 non-nuclear # # Statistic Types # Statistic Description # component-count Number of unique components # contig-L50 Number of contigs that are longer than, or equal to, the N50 length # contig-N50 Contig length at which 50% of total bases in assembly are in contigs of that length or greater # contig-count Number of contigs # gc-perc gc-count/atgc-count as percentage # molecule-count Number of chromosomes and plasmids in full assembly # region-count Number of genomic regions defined in full assembly # spanned-gaps Number of spanned gaps. Spanned gaps are gaps within a scaffold # top-level-count Number of chromosomes or plasmids, unplaced/unlocalized scaffolds, alt-loci scaffolds, and patch scaffolds # total-gap-length Total length of gaps # total-length Total sequence length including bases and gaps # ungapped-length Total length excluding gaps # unspanned-gaps Number of unspanned gaps. Unspanned gaps are gaps between scaffolds # # Sequence-type Description # all statistic covers all the sequences in the unit-assembly and molecule(s) specified. # molecule statistic covers the specified molecule. molecule-name and molecule-type/loc will be given. # unlocalized statistic covers the sequences assigned to a molecule but with no position. molecule-name and molecule-type/loc will be given. # unplaced statistic covers the sequences not assigned to any molecule in the assembly. # # unit-name molecule-name molecule-type/loc sequence-type statistic value all all all all total-length 103863617 all all all all spanned-gaps 0 all all all all unspanned-gaps 0 all all all all region-count 0 all all all all contig-count 207 all all all all contig-N50 1506991 all all all all contig-L50 17 all all all all total-gap-length 0 all all all all molecule-count 1 all all all all top-level-count 207 all all all all component-count 207 all all all all gc-perc 60 Primary Assembly all all all total-length 103829650 Primary Assembly all all all ungapped-length 103829650 Primary Assembly all all all spanned-gaps 0 Primary Assembly all all all unspanned-gaps 0 Primary Assembly all all all gc-perc 60 Primary Assembly all all assembled-molecule total-length 0 Primary Assembly all all assembled-molecule ungapped-length 0 Primary Assembly all all assembled-molecule spanned-gaps 0 Primary Assembly all all assembled-molecule unspanned-gaps 0 Primary Assembly all all unlocalized-scaffold total-length 0 Primary Assembly all all unlocalized-scaffold ungapped-length 0 Primary Assembly all all unlocalized-scaffold spanned-gaps 0 Primary Assembly all all unlocalized-scaffold unspanned-gaps 0 Primary Assembly na na unplaced-scaffold total-length 103829650 Primary Assembly na na unplaced-scaffold ungapped-length 103829650 Primary Assembly na na unplaced-scaffold spanned-gaps 0 Primary Assembly na na unplaced-scaffold unspanned-gaps 0 Primary Assembly na na unplaced-scaffold gc-perc 60 non-nuclear all all all total-length 33967 non-nuclear all all all ungapped-length 33967 non-nuclear all all all spanned-gaps 0 non-nuclear all all all unspanned-gaps 0 non-nuclear all all all gc-perc 41.5 non-nuclear all all assembled-molecule total-length 33967 non-nuclear all all assembled-molecule ungapped-length 33967 non-nuclear all all assembled-molecule spanned-gaps 0 non-nuclear all all assembled-molecule unspanned-gaps 0 non-nuclear all all assembled-molecule gc-perc 41.5 non-nuclear all all unlocalized-scaffold total-length 0 non-nuclear all all unlocalized-scaffold ungapped-length 0 non-nuclear all all unlocalized-scaffold spanned-gaps 0 non-nuclear all all unlocalized-scaffold unspanned-gaps 0 non-nuclear MT Mitochondrion all total-length 33967 non-nuclear MT Mitochondrion all ungapped-length 33967 non-nuclear MT Mitochondrion all spanned-gaps 0 non-nuclear MT Mitochondrion all unspanned-gaps 0 non-nuclear MT Mitochondrion all gc-perc 41.5 non-nuclear MT Mitochondrion assembled-molecule total-length 33967 non-nuclear MT Mitochondrion assembled-molecule ungapped-length 33967 non-nuclear MT Mitochondrion assembled-molecule spanned-gaps 0 non-nuclear MT Mitochondrion assembled-molecule unspanned-gaps 0 non-nuclear MT Mitochondrion assembled-molecule gc-perc 41.5 non-nuclear MT Mitochondrion unlocalized-scaffold total-length 0 non-nuclear MT Mitochondrion unlocalized-scaffold ungapped-length 0 non-nuclear MT Mitochondrion unlocalized-scaffold spanned-gaps 0 non-nuclear MT Mitochondrion unlocalized-scaffold unspanned-gaps 0