# Assembly Statistics Report
# Assembly name:  Aet v5.0
# Organism name:  Aegilops tauschii subsp. strangulata (monocots)
# Infraspecific name:  cultivar=AL8/78
# Taxid:          200361
# BioSample:      SAMN05426520
# BioProject:     PRJNA341983
# Submitter:      Johns Hopkins University
# Date:           2021-09-30
# Assembly type:  haploid
# Release type:   major
# Assembly level: Chromosome
# Genome representation: full
# WGS project:    NWVB02
# Assembly method: FALCON v. 2
# Expected final version: no
# Genome coverage: 36.0x
# Sequencing technology: PacBio
# RefSeq category: Representative Genome
# GenBank assembly accession: GCA_002575655.2
# RefSeq assembly accession: GCF_002575655.2
# RefSeq assembly and GenBank assemblies identical: no
# Reporting on RefSeq assembly.
#
## Assembly-Units:
## GenBank Unit Accession	RefSeq Unit Accession	Assembly-Unit name
## GCA_002575785.2	GCF_002575785.2	Primary Assembly
## 	GCF_001990465.1	non-nuclear
#
# Statistic Types
# Statistic	Description
# component-count	Number of unique components
# contig-L50	Number of contigs that are longer than, or equal to, the N50 length
# contig-N50	Contig length at which 50% of total bases in assembly are in contigs of that length or greater
# contig-count	Number of contigs
# gc-perc	gc-count/atgc-count as percentage
# molecule-count	Number of chromosomes and plasmids in full assembly
# region-count	Number of genomic regions defined in full assembly
# scaffold-L50	Number of scaffolds that are longer than, or equal to, the N50 length
# scaffold-N50	Scaffold length at which 50% of total bases in assembly are in scaffolds of that length or greater
# scaffold-N75	Scaffold length at which 75% of total bases in assembly are in contigs of that length or greater
# scaffold-N90	scaffold length at which 90% of total bases in assembly are in contigs of that length or greater
# scaffold-count	Number of scaffolds
# spanned-gaps	Number of spanned gaps. Spanned gaps are gaps within a scaffold
# top-level-count	Number of chromosomes or plasmids, unplaced/unlocalized scaffolds, alt-loci scaffolds, and patch scaffolds
# total-gap-length	Total length of gaps
# total-length	Total sequence length including bases and gaps
# ungapped-length	Total length excluding gaps
# unspanned-gaps	Number of unspanned gaps. Unspanned gaps are gaps between scaffolds
#
# Sequence-type Description
# all	statistic covers all the sequences in the unit-assembly and molecule(s) specified.
# molecule	statistic covers the specified molecule. molecule-name and molecule-type/loc will be given.
# unlocalized	statistic covers the sequences assigned to a molecule but with no position. molecule-name and molecule-type/loc will be given.
# unplaced	statistic covers the sequences not assigned to any molecule in the assembly.
#
# unit-name	molecule-name	molecule-type/loc	sequence-type	statistic	value
all	all	all	all	total-length	4218179011
all	all	all	all	spanned-gaps	67782
all	all	all	all	unspanned-gaps	0
all	all	all	all	region-count	0
all	all	all	all	scaffold-count	109197
all	all	all	all	scaffold-N50	576238907
all	all	all	all	scaffold-L50	4
all	all	all	all	scaffold-N75	501967303
all	all	all	all	scaffold-N90	495363004
all	all	all	all	contig-count	176979
all	all	all	all	contig-N50	211214
all	all	all	all	contig-L50	5744
all	all	all	all	total-gap-length	85860142
all	all	all	all	molecule-count	8
all	all	all	all	top-level-count	109197
all	all	all	all	component-count	109197
all	all	all	all	gc-perc	46.5
Primary Assembly	all	all	all	total-length	4218064899
Primary Assembly	all	all	all	ungapped-length	4132204757
Primary Assembly	all	all	all	scaffold-count	109196
Primary Assembly	all	all	all	scaffold-N50	576238907
Primary Assembly	all	all	all	spanned-gaps	67782
Primary Assembly	all	all	all	unspanned-gaps	0
Primary Assembly	all	all	all	gc-perc	46.5
Primary Assembly	all	all	assembled-molecule	total-length	4021530969
Primary Assembly	all	all	assembled-molecule	ungapped-length	3948702876
Primary Assembly	all	all	assembled-molecule	scaffold-count	7
Primary Assembly	all	all	assembled-molecule	scaffold-N50	576238907
Primary Assembly	all	all	assembled-molecule	spanned-gaps	52807
Primary Assembly	all	all	assembled-molecule	unspanned-gaps	0
Primary Assembly	all	all	assembled-molecule	gc-perc	46.5
Primary Assembly	all	all	unlocalized-scaffold	total-length	0
Primary Assembly	all	all	unlocalized-scaffold	ungapped-length	0
Primary Assembly	all	all	unlocalized-scaffold	scaffold-count	0
Primary Assembly	all	all	unlocalized-scaffold	scaffold-N50	0
Primary Assembly	all	all	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	all	all	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	na	na	unplaced-scaffold	total-length	196533930
Primary Assembly	na	na	unplaced-scaffold	ungapped-length	183501881
Primary Assembly	na	na	unplaced-scaffold	scaffold-count	109189
Primary Assembly	na	na	unplaced-scaffold	scaffold-N50	7049
Primary Assembly	na	na	unplaced-scaffold	spanned-gaps	14975
Primary Assembly	na	na	unplaced-scaffold	unspanned-gaps	0
Primary Assembly	na	na	unplaced-scaffold	gc-perc	44.5
Primary Assembly	1D	Chromosome	all	total-length	501967303
Primary Assembly	1D	Chromosome	all	ungapped-length	493263565
Primary Assembly	1D	Chromosome	all	scaffold-count	1
Primary Assembly	1D	Chromosome	all	scaffold-N50	501967303
Primary Assembly	1D	Chromosome	all	spanned-gaps	6649
Primary Assembly	1D	Chromosome	all	unspanned-gaps	0
Primary Assembly	1D	Chromosome	all	gc-perc	46.5
Primary Assembly	1D	Chromosome	assembled-molecule	total-length	501967303
Primary Assembly	1D	Chromosome	assembled-molecule	ungapped-length	493263565
Primary Assembly	1D	Chromosome	assembled-molecule	scaffold-count	1
Primary Assembly	1D	Chromosome	assembled-molecule	scaffold-N50	501967303
Primary Assembly	1D	Chromosome	assembled-molecule	spanned-gaps	6649
Primary Assembly	1D	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	1D	Chromosome	assembled-molecule	gc-perc	46.5
Primary Assembly	1D	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	1D	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	1D	Chromosome	unlocalized-scaffold	scaffold-count	0
Primary Assembly	1D	Chromosome	unlocalized-scaffold	scaffold-N50	0
Primary Assembly	1D	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	1D	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	2D	Chromosome	all	total-length	650458083
Primary Assembly	2D	Chromosome	all	ungapped-length	641444381
Primary Assembly	2D	Chromosome	all	scaffold-count	1
Primary Assembly	2D	Chromosome	all	scaffold-N50	650458083
Primary Assembly	2D	Chromosome	all	spanned-gaps	8119
Primary Assembly	2D	Chromosome	all	unspanned-gaps	0
Primary Assembly	2D	Chromosome	all	gc-perc	46.5
Primary Assembly	2D	Chromosome	assembled-molecule	total-length	650458083
Primary Assembly	2D	Chromosome	assembled-molecule	ungapped-length	641444381
Primary Assembly	2D	Chromosome	assembled-molecule	scaffold-count	1
Primary Assembly	2D	Chromosome	assembled-molecule	scaffold-N50	650458083
Primary Assembly	2D	Chromosome	assembled-molecule	spanned-gaps	8119
Primary Assembly	2D	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	2D	Chromosome	assembled-molecule	gc-perc	46.5
Primary Assembly	2D	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	2D	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	2D	Chromosome	unlocalized-scaffold	scaffold-count	0
Primary Assembly	2D	Chromosome	unlocalized-scaffold	scaffold-N50	0
Primary Assembly	2D	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	2D	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	3D	Chromosome	all	total-length	627456150
Primary Assembly	3D	Chromosome	all	ungapped-length	617475975
Primary Assembly	3D	Chromosome	all	scaffold-count	1
Primary Assembly	3D	Chromosome	all	scaffold-N50	627456150
Primary Assembly	3D	Chromosome	all	spanned-gaps	9396
Primary Assembly	3D	Chromosome	all	unspanned-gaps	0
Primary Assembly	3D	Chromosome	all	gc-perc	46.5
Primary Assembly	3D	Chromosome	assembled-molecule	total-length	627456150
Primary Assembly	3D	Chromosome	assembled-molecule	ungapped-length	617475975
Primary Assembly	3D	Chromosome	assembled-molecule	scaffold-count	1
Primary Assembly	3D	Chromosome	assembled-molecule	scaffold-N50	627456150
Primary Assembly	3D	Chromosome	assembled-molecule	spanned-gaps	9396
Primary Assembly	3D	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	3D	Chromosome	assembled-molecule	gc-perc	46.5
Primary Assembly	3D	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	3D	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	3D	Chromosome	unlocalized-scaffold	scaffold-count	0
Primary Assembly	3D	Chromosome	unlocalized-scaffold	scaffold-N50	0
Primary Assembly	3D	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	3D	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	4D	Chromosome	all	total-length	525206139
Primary Assembly	4D	Chromosome	all	ungapped-length	516234797
Primary Assembly	4D	Chromosome	all	scaffold-count	1
Primary Assembly	4D	Chromosome	all	scaffold-N50	525206139
Primary Assembly	4D	Chromosome	all	spanned-gaps	6216
Primary Assembly	4D	Chromosome	all	unspanned-gaps	0
Primary Assembly	4D	Chromosome	all	gc-perc	46.5
Primary Assembly	4D	Chromosome	assembled-molecule	total-length	525206139
Primary Assembly	4D	Chromosome	assembled-molecule	ungapped-length	516234797
Primary Assembly	4D	Chromosome	assembled-molecule	scaffold-count	1
Primary Assembly	4D	Chromosome	assembled-molecule	scaffold-N50	525206139
Primary Assembly	4D	Chromosome	assembled-molecule	spanned-gaps	6216
Primary Assembly	4D	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	4D	Chromosome	assembled-molecule	gc-perc	46.5
Primary Assembly	4D	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	4D	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	4D	Chromosome	unlocalized-scaffold	scaffold-count	0
Primary Assembly	4D	Chromosome	unlocalized-scaffold	scaffold-N50	0
Primary Assembly	4D	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	4D	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	5D	Chromosome	all	total-length	576238907
Primary Assembly	5D	Chromosome	all	ungapped-length	563498157
Primary Assembly	5D	Chromosome	all	scaffold-count	1
Primary Assembly	5D	Chromosome	all	scaffold-N50	576238907
Primary Assembly	5D	Chromosome	all	spanned-gaps	7583
Primary Assembly	5D	Chromosome	all	unspanned-gaps	0
Primary Assembly	5D	Chromosome	all	gc-perc	46.5
Primary Assembly	5D	Chromosome	assembled-molecule	total-length	576238907
Primary Assembly	5D	Chromosome	assembled-molecule	ungapped-length	563498157
Primary Assembly	5D	Chromosome	assembled-molecule	scaffold-count	1
Primary Assembly	5D	Chromosome	assembled-molecule	scaffold-N50	576238907
Primary Assembly	5D	Chromosome	assembled-molecule	spanned-gaps	7583
Primary Assembly	5D	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	5D	Chromosome	assembled-molecule	gc-perc	46.5
Primary Assembly	5D	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	5D	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	5D	Chromosome	unlocalized-scaffold	scaffold-count	0
Primary Assembly	5D	Chromosome	unlocalized-scaffold	scaffold-N50	0
Primary Assembly	5D	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	5D	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	6D	Chromosome	all	total-length	495363004
Primary Assembly	6D	Chromosome	all	ungapped-length	487283514
Primary Assembly	6D	Chromosome	all	scaffold-count	1
Primary Assembly	6D	Chromosome	all	scaffold-N50	495363004
Primary Assembly	6D	Chromosome	all	spanned-gaps	6218
Primary Assembly	6D	Chromosome	all	unspanned-gaps	0
Primary Assembly	6D	Chromosome	all	gc-perc	46.5
Primary Assembly	6D	Chromosome	assembled-molecule	total-length	495363004
Primary Assembly	6D	Chromosome	assembled-molecule	ungapped-length	487283514
Primary Assembly	6D	Chromosome	assembled-molecule	scaffold-count	1
Primary Assembly	6D	Chromosome	assembled-molecule	scaffold-N50	495363004
Primary Assembly	6D	Chromosome	assembled-molecule	spanned-gaps	6218
Primary Assembly	6D	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	6D	Chromosome	assembled-molecule	gc-perc	46.5
Primary Assembly	6D	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	6D	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	6D	Chromosome	unlocalized-scaffold	scaffold-count	0
Primary Assembly	6D	Chromosome	unlocalized-scaffold	scaffold-N50	0
Primary Assembly	6D	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	6D	Chromosome	unlocalized-scaffold	unspanned-gaps	0
Primary Assembly	7D	Chromosome	all	total-length	644841383
Primary Assembly	7D	Chromosome	all	ungapped-length	629502487
Primary Assembly	7D	Chromosome	all	scaffold-count	1
Primary Assembly	7D	Chromosome	all	scaffold-N50	644841383
Primary Assembly	7D	Chromosome	all	spanned-gaps	8626
Primary Assembly	7D	Chromosome	all	unspanned-gaps	0
Primary Assembly	7D	Chromosome	all	gc-perc	46.5
Primary Assembly	7D	Chromosome	assembled-molecule	total-length	644841383
Primary Assembly	7D	Chromosome	assembled-molecule	ungapped-length	629502487
Primary Assembly	7D	Chromosome	assembled-molecule	scaffold-count	1
Primary Assembly	7D	Chromosome	assembled-molecule	scaffold-N50	644841383
Primary Assembly	7D	Chromosome	assembled-molecule	spanned-gaps	8626
Primary Assembly	7D	Chromosome	assembled-molecule	unspanned-gaps	0
Primary Assembly	7D	Chromosome	assembled-molecule	gc-perc	46.5
Primary Assembly	7D	Chromosome	unlocalized-scaffold	total-length	0
Primary Assembly	7D	Chromosome	unlocalized-scaffold	ungapped-length	0
Primary Assembly	7D	Chromosome	unlocalized-scaffold	scaffold-count	0
Primary Assembly	7D	Chromosome	unlocalized-scaffold	scaffold-N50	0
Primary Assembly	7D	Chromosome	unlocalized-scaffold	spanned-gaps	0
Primary Assembly	7D	Chromosome	unlocalized-scaffold	unspanned-gaps	0
non-nuclear	all	all	all	total-length	114112
non-nuclear	all	all	all	ungapped-length	114112
non-nuclear	all	all	all	scaffold-count	1
non-nuclear	all	all	all	scaffold-N50	114112
non-nuclear	all	all	all	spanned-gaps	0
non-nuclear	all	all	all	unspanned-gaps	0
non-nuclear	all	all	all	gc-perc	37.5
non-nuclear	all	all	assembled-molecule	total-length	114112
non-nuclear	all	all	assembled-molecule	ungapped-length	114112
non-nuclear	all	all	assembled-molecule	scaffold-count	1
non-nuclear	all	all	assembled-molecule	scaffold-N50	114112
non-nuclear	all	all	assembled-molecule	spanned-gaps	0
non-nuclear	all	all	assembled-molecule	unspanned-gaps	0
non-nuclear	all	all	assembled-molecule	gc-perc	37.5
non-nuclear	all	all	unlocalized-scaffold	total-length	0
non-nuclear	all	all	unlocalized-scaffold	ungapped-length	0
non-nuclear	all	all	unlocalized-scaffold	scaffold-count	0
non-nuclear	all	all	unlocalized-scaffold	scaffold-N50	0
non-nuclear	all	all	unlocalized-scaffold	spanned-gaps	0
non-nuclear	all	all	unlocalized-scaffold	unspanned-gaps	0
non-nuclear	Pltd	Chloroplast	all	total-length	114112
non-nuclear	Pltd	Chloroplast	all	ungapped-length	114112
non-nuclear	Pltd	Chloroplast	all	scaffold-count	1
non-nuclear	Pltd	Chloroplast	all	scaffold-N50	114112
non-nuclear	Pltd	Chloroplast	all	spanned-gaps	0
non-nuclear	Pltd	Chloroplast	all	unspanned-gaps	0
non-nuclear	Pltd	Chloroplast	all	gc-perc	37.5
non-nuclear	Pltd	Chloroplast	assembled-molecule	total-length	114112
non-nuclear	Pltd	Chloroplast	assembled-molecule	ungapped-length	114112
non-nuclear	Pltd	Chloroplast	assembled-molecule	scaffold-count	1
non-nuclear	Pltd	Chloroplast	assembled-molecule	scaffold-N50	114112
non-nuclear	Pltd	Chloroplast	assembled-molecule	spanned-gaps	0
non-nuclear	Pltd	Chloroplast	assembled-molecule	unspanned-gaps	0
non-nuclear	Pltd	Chloroplast	assembled-molecule	gc-perc	37.5
non-nuclear	Pltd	Chloroplast	unlocalized-scaffold	total-length	0
non-nuclear	Pltd	Chloroplast	unlocalized-scaffold	ungapped-length	0
non-nuclear	Pltd	Chloroplast	unlocalized-scaffold	scaffold-count	0
non-nuclear	Pltd	Chloroplast	unlocalized-scaffold	scaffold-N50	0
non-nuclear	Pltd	Chloroplast	unlocalized-scaffold	spanned-gaps	0
non-nuclear	Pltd	Chloroplast	unlocalized-scaffold	unspanned-gaps	0